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Conserved domains on  [gi|6324783|ref|NP_014852|]
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nicotinate phosphoribosyltransferase [Saccharomyces cerevisiae S288C]

Protein Classification

nicotinate phosphoribosyltransferase( domain architecture ID 11492718)

nicotinate phosphoribosyltransferase (NAPRTase) catalyzes the first and rate limiting step of the NAD salvage pathway, the formation of nicotinic acid mononucleotide (NAMN) and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid

CATH:  3.20.140.10
EC:  6.3.4.21
Gene Ontology:  GO:0004516|GO:0009435
PubMed:  19149599|19109034
SCOP:  4002556|4002550

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NAPRTase TIGR01514
nicotinate phosphoribosyltransferase; This model represents nicotinate ...
5-416 0e+00

nicotinate phosphoribosyltransferase; This model represents nicotinate phosphoribosyltransferase, the first enzyme in the salvage pathway of NAD biosynthesis from nicontinate (niacin). Members are primary proteobacterial but also include yeasts and Methanosarcina acetivorans. A related family, apparently non-overlapping in species distribution, is TIGR01513. Members of that family differ in substantially in sequence and have a long C-terminal extension missing from this family, but are proposed also to act as nicotinate phosphoribosyltransferase (see model TIGR01513). [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


:

Pssm-ID: 130578 [Multi-domain]  Cd Length: 394  Bit Score: 580.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783      5 VIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQlTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAY 84
Cdd:TIGR01514   1 IIRSLLDTDLYKITMHQAVFHNFPDVHVTYEFICRSSQ-LFLKEAAEALREEISALGNLRFTDDEIEYLKQELPYLKSDY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     85 IKYISssNYKLHPEEQISFTSeeIEGKpthyKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKK- 163
Cdd:TIGR01514  80 IDYLR--NFRFHPEEQVEVGI--DDKG----KLDIRISGSWRDTILYEIPLLAIISELYFRFRDAEADYEQQLEVLESKl 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    164 --------AETLFDNGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGnpdrnksLLLGTSNILFAKKYGVKPIGTVAHEWV 235
Cdd:TIGR01514 152 dqlkaeiaAETMFENGFRFSEFGTRRRFSLEVQDLVTQGLKQAAPS-------WLLGTSNVHLAKKLGLKPIGTVAHEWF 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    236 MGVASISEdYLHANKNAMDCWINTFGAKnAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDVL 315
Cdd:TIGR01514 225 QGHQAISE-YRNAQKVALECWINEYDGD-LGIALTDTFTTDAFLRDFRPPFADAYDGLRHDSGDPVEWGDKAIAHYQKLG 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    316 KLPKfSKIICYSDSLNVEKAITYSHAAKEnGMLATFGIGTNFTNDFRkksepqvKSEPLNIVIKLLEVNGNHAIKISDNL 395
Cdd:TIGR01514 303 IDPK-SKIIIFSDSLDVEKAIELSHYFKG-RVKASFGIGTNLTNDFG-------KVEPLNIVIKLVECNGNPVAKLSDSP 373
                         410       420
                  ....*....|....*....|.
gi 6324783    396 GKNMGDPATVKRVKEELGYTE 416
Cdd:TIGR01514 374 GKTMGEPATFLRALRELFDTP 394
 
Name Accession Description Interval E-value
NAPRTase TIGR01514
nicotinate phosphoribosyltransferase; This model represents nicotinate ...
5-416 0e+00

nicotinate phosphoribosyltransferase; This model represents nicotinate phosphoribosyltransferase, the first enzyme in the salvage pathway of NAD biosynthesis from nicontinate (niacin). Members are primary proteobacterial but also include yeasts and Methanosarcina acetivorans. A related family, apparently non-overlapping in species distribution, is TIGR01513. Members of that family differ in substantially in sequence and have a long C-terminal extension missing from this family, but are proposed also to act as nicotinate phosphoribosyltransferase (see model TIGR01513). [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 130578 [Multi-domain]  Cd Length: 394  Bit Score: 580.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783      5 VIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQlTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAY 84
Cdd:TIGR01514   1 IIRSLLDTDLYKITMHQAVFHNFPDVHVTYEFICRSSQ-LFLKEAAEALREEISALGNLRFTDDEIEYLKQELPYLKSDY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     85 IKYISssNYKLHPEEQISFTSeeIEGKpthyKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKK- 163
Cdd:TIGR01514  80 IDYLR--NFRFHPEEQVEVGI--DDKG----KLDIRISGSWRDTILYEIPLLAIISELYFRFRDAEADYEQQLEVLESKl 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    164 --------AETLFDNGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGnpdrnksLLLGTSNILFAKKYGVKPIGTVAHEWV 235
Cdd:TIGR01514 152 dqlkaeiaAETMFENGFRFSEFGTRRRFSLEVQDLVTQGLKQAAPS-------WLLGTSNVHLAKKLGLKPIGTVAHEWF 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    236 MGVASISEdYLHANKNAMDCWINTFGAKnAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDVL 315
Cdd:TIGR01514 225 QGHQAISE-YRNAQKVALECWINEYDGD-LGIALTDTFTTDAFLRDFRPPFADAYDGLRHDSGDPVEWGDKAIAHYQKLG 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    316 KLPKfSKIICYSDSLNVEKAITYSHAAKEnGMLATFGIGTNFTNDFRkksepqvKSEPLNIVIKLLEVNGNHAIKISDNL 395
Cdd:TIGR01514 303 IDPK-SKIIIFSDSLDVEKAIELSHYFKG-RVKASFGIGTNLTNDFG-------KVEPLNIVIKLVECNGNPVAKLSDSP 373
                         410       420
                  ....*....|....*....|.
gi 6324783    396 GKNMGDPATVKRVKEELGYTE 416
Cdd:TIGR01514 374 GKTMGEPATFLRALRELFDTP 394
PncB_like cd01401
Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB. Nicotinate ...
7-399 0e+00

Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria, archea and funghi.


Pssm-ID: 238695 [Multi-domain]  Cd Length: 377  Bit Score: 557.63  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    7 KSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQLtFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIK 86
Cdd:cd01401   1 RSLLDTDLYKLTMQQAVLHHYPDVQVTYEFTNRSPED-FLEEAAEALREQIDHLANLRFSEEELAYLRRSLPFLKPDYLD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   87 YISssNYKLHPEEQISFTSEeiegkpTHYKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKKAET 166
Cdd:cd01401  80 YLE--LFRLNPEEVVVRLDT------GKGQLDIRISGPWKDTILYEVPLLAIVSEVYFRFRDADWDYEEQLEKLEEKLER 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  167 LFD-------NGIRFSEFGTRRRRSLKAQDLIMQGIMKAVngnpdrnKSLLLGTSNILFAKKYGVKPIGTVAHEWVMGVA 239
Cdd:cd01401 152 LLEeakrrdlNGFRFSDFGTRRRFSYEVQETVLKGLKQAA-------PGYLTGTSNVHFAMKYGLTPIGTVAHEWFMAHQ 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  240 SISEDYLHANKNAMDCWINTFGaKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDvLKLPK 319
Cdd:cd01401 225 ALTGDLKDSQKAALERWVREYG-GDLGIALTDTFGTDAFLRDFDLYFAKLFDGVRHDSGDPFEWGEKAIAHYEK-LGIDP 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  320 FSKIICYSDSLNVEKAITYSHAAKEnGMLATFGIGTNFTNDFRKKsepqVKSEPLNIVIKLLEVNGNHAIKISDNLGKNM 399
Cdd:cd01401 303 KTKTLVFSDGLDVEKALELYEYFKG-RIKVSFGIGTNLTNDFGNK----EKSTPLNIVIKLVECNGRPVAKISDSPGKNM 377
PRK05321 PRK05321
nicotinate phosphoribosyltransferase; Provisional
1-407 2.40e-130

nicotinate phosphoribosyltransferase; Provisional


Pssm-ID: 235406 [Multi-domain]  Cd Length: 400  Bit Score: 381.42  E-value: 2.40e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     1 MSEPVIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQLtFNKEAINWLKEQFSYLGNLRFTEEEIEYLKqEIPYL 80
Cdd:PRK05321   4 KADPIIRSLLDTDFYKLTMQQAVLHHYPDAQVEYEFICRNDEV-DLAEYIDEIREQLDHLCTLRLTDDELDYLR-GLPFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    81 PSAYIKYISssNYKLHPEE-QISFTSEEIEgkpthyklkILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQ 159
Cdd:PRK05321  82 KPDFLDWLR--LFRLNPYEvTVSIDDGQLD---------IRIEGPWLETILWEVPLLAIISELYFRARSPEVLYAQAKRR 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   160 AEKKAETLFD----NGIRFSEFGTRRRRSLKAQDLIMQgIMKAvnGNPDRnkslLLGTSNILFAKKYGVKPIGTVAHEWV 235
Cdd:PRK05321 151 LWEKIELLKAlpdlSGFKIADFGTRRRFSFEWQEEVVE-ALKE--GLPGA----FVGTSNVHLAMKLGLTPIGTMAHEWF 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   236 MGVASISEDYLHANKNAMDCWINTFGaKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHdvl 315
Cdd:PRK05321 224 MAHQALGPRLRDSQYAALEDWVREYR-GDLGIALTDTIGMDAFLRDFDLYFAKLFDGLRHDSGDPIEWGEKAIAHYE--- 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   316 KL---PKfSKIICYSDSLNVEKAI-TYSHAAKENGMlaTFGIGTNFTNDFRkksepqvKSEPLNIVIKLLEVNGNHAIKI 391
Cdd:PRK05321 300 KLgidPR-TKTLVFSDGLDFDKALeLYRHFKGRIKL--SFGIGTNLTNDFP-------GVKPLNIVIKLVECNGRPVAKL 369
                        410
                 ....*....|....*.
gi 6324783   392 SDNLGKNMGDPATVKR 407
Cdd:PRK05321 370 SDSPGKTMCDDPEFLR 385
NAPRTase pfam04095
Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase ...
172-416 2.80e-100

Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase (EC:2.4.2.11) is the rate limiting enzyme that catalyzes the first reaction in the NAD salvage synthesis. This family also includes Pre-B cell enhancing factor that is a cytokine Swiss:P43490. This family is related to Quinolinate phosphoribosyltransferase pfam01729.


Pssm-ID: 397974 [Multi-domain]  Cd Length: 235  Bit Score: 298.53  E-value: 2.80e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    172 IRFSEFGTRRRRSLKAQDLIMQgimkavngnpdRNKSLLLGTSNILFAKKYGVKPIGTVAHEWVMGVASISEDYLHANKN 251
Cdd:pfam04095   1 FKLHDFGTRRRSSLESQEIVGL-----------AHLVNFLGTSNVHFAAKYSIPPAGTSAHEWWGAHQELDANLRQFQKD 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    252 AMDCWINTFGAkNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDVLKLPKFSKIICYSDSLN 331
Cdd:pfam04095  70 ALDLWHAEYRG-NLGIALTDTVTMDAFLKDFDLYFAKLYLGVRPDSGDPVEWGEKLIAHYGSTLNIDGYTKRLIFSDGLD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    332 VEKAITYSHAAKENGMLATFGIGTNFTNDF-RKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGKNM-GDPATVKRVK 409
Cdd:pfam04095 149 VEKIIELLEYFKGKGFNIAFGIGTNLTQDLnRDTLGFAVKATPLNIVIKLVEVNGDPVAKISDSSGKGRcGDPAFVALLR 228

                  ....*..
gi 6324783    410 EELGYTE 416
Cdd:pfam04095 229 TVFDNGE 235
PncB COG1488
Nicotinic acid phosphoribosyltransferase [Coenzyme transport and metabolism]; Nicotinic acid ...
8-397 2.41e-19

Nicotinic acid phosphoribosyltransferase [Coenzyme transport and metabolism]; Nicotinic acid phosphoribosyltransferase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 441097 [Multi-domain]  Cd Length: 445  Bit Score: 89.82  E-value: 2.41e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    8 SLLDTDMYKITMHAAVF-TNFPDVTVTYKYTNRSsqLTFNK--------EAInwLKeqfsYLGNLRFTEEEIEYLKQEiP 78
Cdd:COG1488   4 LALLTDLYKLTMAQAYLpEGTANRRAVFELFFRR--LPFGRgyvvfaglQRF--LK----YLENLRFTEEDIAYLRSL-G 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   79 YLPSAYIKYISssNYKLH------PEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLI-------SEAYfk 145
Cdd:COG1488  75 VFDEDFLDYLA--DFRFPgdiravPEGTVVFPGEPL----------LTVEGTLPEAQLLETLLLNILnyptliaTKAA-- 140
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  146 fvdidwdyenQLEQAekkAEtlfdnGIRFSEFGTRRRRSLKAqdlimqGIMKA-----VNgnpdrnkslLLGTSNILFAK 220
Cdd:COG1488 141 ----------RIVQA---AG-----GRPLHDFGLRRAHGLEA------AVAAAraaylAG---------FAGTSNVLAGR 187
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  221 KYGVKPIGTVAHEWVMgvasisedyLHAN-KNAMDCWINTFGAKNAglALTDTFGT-----------DDFLKSFRPpysd 288
Cdd:COG1488 188 YYGIPSVGTMAHSFVQ---------AHDDeLEAFRAFAEAYPDGTT--LLVDTYDTlsgvpnaielaKELLARGGL---- 252
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  289 ayVGVRQDSGDPVEYTKKI-----SHHYHDVlklpkfsKIIcYSDSLNVEKAIT-YSHAAKENGmlatFGIGTNFTndfr 362
Cdd:COG1488 253 --LGIRLDSGDLAYLSKQArelldEAGLPDV-------RII-ASDDLDEYRIAAlLEQGAPIDV----FGVGTRLV---- 314
                       410       420       430       440
                ....*....|....*....|....*....|....*....|
gi 6324783  363 kksepQVKSEP-LNIVIKLLEVNGNHA----IKISDNLGK 397
Cdd:COG1488 315 -----TSSDRPtLGFVYKLVAVEGDGEwrpvIKLSETPGK 349
 
Name Accession Description Interval E-value
NAPRTase TIGR01514
nicotinate phosphoribosyltransferase; This model represents nicotinate ...
5-416 0e+00

nicotinate phosphoribosyltransferase; This model represents nicotinate phosphoribosyltransferase, the first enzyme in the salvage pathway of NAD biosynthesis from nicontinate (niacin). Members are primary proteobacterial but also include yeasts and Methanosarcina acetivorans. A related family, apparently non-overlapping in species distribution, is TIGR01513. Members of that family differ in substantially in sequence and have a long C-terminal extension missing from this family, but are proposed also to act as nicotinate phosphoribosyltransferase (see model TIGR01513). [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 130578 [Multi-domain]  Cd Length: 394  Bit Score: 580.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783      5 VIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQlTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAY 84
Cdd:TIGR01514   1 IIRSLLDTDLYKITMHQAVFHNFPDVHVTYEFICRSSQ-LFLKEAAEALREEISALGNLRFTDDEIEYLKQELPYLKSDY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     85 IKYISssNYKLHPEEQISFTSeeIEGKpthyKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKK- 163
Cdd:TIGR01514  80 IDYLR--NFRFHPEEQVEVGI--DDKG----KLDIRISGSWRDTILYEIPLLAIISELYFRFRDAEADYEQQLEVLESKl 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    164 --------AETLFDNGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGnpdrnksLLLGTSNILFAKKYGVKPIGTVAHEWV 235
Cdd:TIGR01514 152 dqlkaeiaAETMFENGFRFSEFGTRRRFSLEVQDLVTQGLKQAAPS-------WLLGTSNVHLAKKLGLKPIGTVAHEWF 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    236 MGVASISEdYLHANKNAMDCWINTFGAKnAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDVL 315
Cdd:TIGR01514 225 QGHQAISE-YRNAQKVALECWINEYDGD-LGIALTDTFTTDAFLRDFRPPFADAYDGLRHDSGDPVEWGDKAIAHYQKLG 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    316 KLPKfSKIICYSDSLNVEKAITYSHAAKEnGMLATFGIGTNFTNDFRkksepqvKSEPLNIVIKLLEVNGNHAIKISDNL 395
Cdd:TIGR01514 303 IDPK-SKIIIFSDSLDVEKAIELSHYFKG-RVKASFGIGTNLTNDFG-------KVEPLNIVIKLVECNGNPVAKLSDSP 373
                         410       420
                  ....*....|....*....|.
gi 6324783    396 GKNMGDPATVKRVKEELGYTE 416
Cdd:TIGR01514 374 GKTMGEPATFLRALRELFDTP 394
PncB_like cd01401
Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB. Nicotinate ...
7-399 0e+00

Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria, archea and funghi.


Pssm-ID: 238695 [Multi-domain]  Cd Length: 377  Bit Score: 557.63  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    7 KSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQLtFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIK 86
Cdd:cd01401   1 RSLLDTDLYKLTMQQAVLHHYPDVQVTYEFTNRSPED-FLEEAAEALREQIDHLANLRFSEEELAYLRRSLPFLKPDYLD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   87 YISssNYKLHPEEQISFTSEeiegkpTHYKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKKAET 166
Cdd:cd01401  80 YLE--LFRLNPEEVVVRLDT------GKGQLDIRISGPWKDTILYEVPLLAIVSEVYFRFRDADWDYEEQLEKLEEKLER 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  167 LFD-------NGIRFSEFGTRRRRSLKAQDLIMQGIMKAVngnpdrnKSLLLGTSNILFAKKYGVKPIGTVAHEWVMGVA 239
Cdd:cd01401 152 LLEeakrrdlNGFRFSDFGTRRRFSYEVQETVLKGLKQAA-------PGYLTGTSNVHFAMKYGLTPIGTVAHEWFMAHQ 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  240 SISEDYLHANKNAMDCWINTFGaKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDvLKLPK 319
Cdd:cd01401 225 ALTGDLKDSQKAALERWVREYG-GDLGIALTDTFGTDAFLRDFDLYFAKLFDGVRHDSGDPFEWGEKAIAHYEK-LGIDP 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  320 FSKIICYSDSLNVEKAITYSHAAKEnGMLATFGIGTNFTNDFRKKsepqVKSEPLNIVIKLLEVNGNHAIKISDNLGKNM 399
Cdd:cd01401 303 KTKTLVFSDGLDVEKALELYEYFKG-RIKVSFGIGTNLTNDFGNK----EKSTPLNIVIKLVECNGRPVAKISDSPGKNM 377
PRK05321 PRK05321
nicotinate phosphoribosyltransferase; Provisional
1-407 2.40e-130

nicotinate phosphoribosyltransferase; Provisional


Pssm-ID: 235406 [Multi-domain]  Cd Length: 400  Bit Score: 381.42  E-value: 2.40e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     1 MSEPVIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQLtFNKEAINWLKEQFSYLGNLRFTEEEIEYLKqEIPYL 80
Cdd:PRK05321   4 KADPIIRSLLDTDFYKLTMQQAVLHHYPDAQVEYEFICRNDEV-DLAEYIDEIREQLDHLCTLRLTDDELDYLR-GLPFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    81 PSAYIKYISssNYKLHPEE-QISFTSEEIEgkpthyklkILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQ 159
Cdd:PRK05321  82 KPDFLDWLR--LFRLNPYEvTVSIDDGQLD---------IRIEGPWLETILWEVPLLAIISELYFRARSPEVLYAQAKRR 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   160 AEKKAETLFD----NGIRFSEFGTRRRRSLKAQDLIMQgIMKAvnGNPDRnkslLLGTSNILFAKKYGVKPIGTVAHEWV 235
Cdd:PRK05321 151 LWEKIELLKAlpdlSGFKIADFGTRRRFSFEWQEEVVE-ALKE--GLPGA----FVGTSNVHLAMKLGLTPIGTMAHEWF 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   236 MGVASISEDYLHANKNAMDCWINTFGaKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHdvl 315
Cdd:PRK05321 224 MAHQALGPRLRDSQYAALEDWVREYR-GDLGIALTDTIGMDAFLRDFDLYFAKLFDGLRHDSGDPIEWGEKAIAHYE--- 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   316 KL---PKfSKIICYSDSLNVEKAI-TYSHAAKENGMlaTFGIGTNFTNDFRkksepqvKSEPLNIVIKLLEVNGNHAIKI 391
Cdd:PRK05321 300 KLgidPR-TKTLVFSDGLDFDKALeLYRHFKGRIKL--SFGIGTNLTNDFP-------GVKPLNIVIKLVECNGRPVAKL 369
                        410
                 ....*....|....*.
gi 6324783   392 SDNLGKNMGDPATVKR 407
Cdd:PRK05321 370 SDSPGKTMCDDPEFLR 385
NAPRTase pfam04095
Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase ...
172-416 2.80e-100

Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase (EC:2.4.2.11) is the rate limiting enzyme that catalyzes the first reaction in the NAD salvage synthesis. This family also includes Pre-B cell enhancing factor that is a cytokine Swiss:P43490. This family is related to Quinolinate phosphoribosyltransferase pfam01729.


Pssm-ID: 397974 [Multi-domain]  Cd Length: 235  Bit Score: 298.53  E-value: 2.80e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    172 IRFSEFGTRRRRSLKAQDLIMQgimkavngnpdRNKSLLLGTSNILFAKKYGVKPIGTVAHEWVMGVASISEDYLHANKN 251
Cdd:pfam04095   1 FKLHDFGTRRRSSLESQEIVGL-----------AHLVNFLGTSNVHFAAKYSIPPAGTSAHEWWGAHQELDANLRQFQKD 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    252 AMDCWINTFGAkNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDVLKLPKFSKIICYSDSLN 331
Cdd:pfam04095  70 ALDLWHAEYRG-NLGIALTDTVTMDAFLKDFDLYFAKLYLGVRPDSGDPVEWGEKLIAHYGSTLNIDGYTKRLIFSDGLD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    332 VEKAITYSHAAKENGMLATFGIGTNFTNDF-RKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGKNM-GDPATVKRVK 409
Cdd:pfam04095 149 VEKIIELLEYFKGKGFNIAFGIGTNLTQDLnRDTLGFAVKATPLNIVIKLVEVNGDPVAKISDSSGKGRcGDPAFVALLR 228

                  ....*..
gi 6324783    410 EELGYTE 416
Cdd:pfam04095 229 TVFDNGE 235
NAPRTase_PncB cd01567
Nicotinate phosphoribosyltransferase (NAPRTase) family. Nicotinate phosphoribosyltransferase ...
9-379 4.78e-92

Nicotinate phosphoribosyltransferase (NAPRTase) family. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products.


Pssm-ID: 238801 [Multi-domain]  Cd Length: 343  Bit Score: 281.47  E-value: 4.78e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    9 LLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQLTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPS-AYIKY 87
Cdd:cd01567   1 LLDTDLYKLTMMQAYLYPYPNTRVVFEFTFRSNPFGGDYIVFAGLEEVLKLLENLRFTEEEIEYLKKLLIFGEFfLYLLF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   88 ISSSNYKLH--PEEQISFTSEeiegkpthykLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKKAE 165
Cdd:cd01567  81 LGKLPLEIYalPEGTVVFPKE----------PLLTIEGPWPEAGLLETPLLAIWNEATSIATKAARKKLAAGGLLETKDN 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  166 tLFDNGIRFSEFGTRRRRSLKAQdliMQGIMKA-VNGnpdrnkslLLGTSNILFAKKYGVKPIGTVAHEWVMGVASIsed 244
Cdd:cd01567 151 -LEELGFKLHDFGTRRRHSPEAA---LSGGRAAlIGG--------FGGTSNVAAAKKLGIPPIGTMAHSWIQAFGAL--- 215
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  245 yLHANKNAMDCWINTFGAKNaGLALTDTFGTD-DFLKSFRPPYS----DAYVGVRQDSGDPVEYTKKISHHYHDVLKLPK 319
Cdd:cd01567 216 -EEAAFEAFARWLPQFGGGL-GIALIDTYDTDnGFLNALKLAKAlgagGGLLGVRLDSGDPVELIKKVRKHLDELGIDLN 293
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  320 fSKIICYSDSLNVEKAITYSHAAKEnGMLATFGIGTNFTNDFRkksepqvkSEPLNIVIK 379
Cdd:cd01567 294 -KKKIIISGDLDTEEAIELLLEQGA-SPNDAFGVGTSLTNDLG--------RPPLGFVYK 343
NAPRTase_N pfam17767
Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain; Nicotinate ...
10-140 3.11e-43

Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain; Nicotinate phosphoribosyltransferase (EC:2.4.2.11) is the rate limiting enzyme that catalyzes the first reaction in the NAD salvage synthesis. This is the N-terminal domain of the enzyme.


Pssm-ID: 465494 [Multi-domain]  Cd Length: 125  Bit Score: 147.66  E-value: 3.11e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     10 LDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQLTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIKYIs 89
Cdd:pfam17767   1 LDTDLYKLTMAQAYFKNGPDVQVVFEFFNRTNPFGGLYAVFAGLEEQIEFLENLRFTEEEIEYLRRSLPYFKPDFLDYL- 79
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 6324783     90 sSNYKLHPEEqISFTSEEIegkPTHYKLKILVSGSWKDTILYEIPLLSLIS 140
Cdd:pfam17767  80 -RNFRFDPSI-VAVPEGEV---VFPGEPLLRIEGPWLETILLETPLLAIVN 125
PRTase_typeII cd00516
Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an ...
13-379 2.47e-39

Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate phosphoribosyltransferase (NAPRTase), to be used in the synthesis of NAD. QAPRTase catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide, an important step in the de novo synthesis of NAD. NAPRTase catalyses a similar reaction leading to NAMN and pyrophosphate, using nicotinic acid an PPRP as substrates, used in the NAD salvage pathway.


Pssm-ID: 238286 [Multi-domain]  Cd Length: 281  Bit Score: 142.38  E-value: 2.47e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   13 DMYKITMHAAvfTNFPDVTVTYKYTNRSSQLTFnkeaINWLKEQFSYLGNLRFTEEEIEYLKqeipylpsayikyisssn 92
Cdd:cd00516   1 DLYKLTMIQA--YPPPDTRATAEFTAREDPYGV----LAGLEEALELLELLRFPGPLVILAV------------------ 56
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   93 yklhPEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLISEAYFKFVDidwdyenqleqAEKKAETLFDNGI 172
Cdd:cd00516  57 ----PEGTVVEPGEPL----------LTIEGPARELLLLERVLLNLLQRLSGIATA-----------TARYVEAAKGANT 111
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  173 RFSEFGTRRRRSlkaqDLIMQGIMKAVNGNpdrnkslLLGTSNILFAKKYGVKPIGTVAHEWVMGvasiseDYLHANKNA 252
Cdd:cd00516 112 KVHDFGTRKTTP----GLRLLEKYAVLIGG-------GDGHRNGLSDAILIKDNHGTMAHSIIQA------FGELAAVKA 174
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  253 MDCWINtfgakNAGLALTDTFgTDDFLKSFRPPYSDAYVGVRQDSG-----DPVEYTKKISHHYhDVLKLPKfsKIICYS 327
Cdd:cd00516 175 LRRWLP-----ELFIALIDVE-VDTLEEALEAAKAGGADGIRLDSGspeelDPAVLILKARAHL-DGKGLPR--VKIEAS 245
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|..
gi 6324783  328 DSLNVEKAITYSHAAKEngmlaTFGIGTNFTNDfrkksepqvksEPLNIVIK 379
Cdd:cd00516 246 GGLDEENIRAYAETGVD-----VFGVGTLLHSA-----------PPLDIVLK 281
PncB COG1488
Nicotinic acid phosphoribosyltransferase [Coenzyme transport and metabolism]; Nicotinic acid ...
8-397 2.41e-19

Nicotinic acid phosphoribosyltransferase [Coenzyme transport and metabolism]; Nicotinic acid phosphoribosyltransferase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 441097 [Multi-domain]  Cd Length: 445  Bit Score: 89.82  E-value: 2.41e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    8 SLLDTDMYKITMHAAVF-TNFPDVTVTYKYTNRSsqLTFNK--------EAInwLKeqfsYLGNLRFTEEEIEYLKQEiP 78
Cdd:COG1488   4 LALLTDLYKLTMAQAYLpEGTANRRAVFELFFRR--LPFGRgyvvfaglQRF--LK----YLENLRFTEEDIAYLRSL-G 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   79 YLPSAYIKYISssNYKLH------PEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLI-------SEAYfk 145
Cdd:COG1488  75 VFDEDFLDYLA--DFRFPgdiravPEGTVVFPGEPL----------LTVEGTLPEAQLLETLLLNILnyptliaTKAA-- 140
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  146 fvdidwdyenQLEQAekkAEtlfdnGIRFSEFGTRRRRSLKAqdlimqGIMKA-----VNgnpdrnkslLLGTSNILFAK 220
Cdd:COG1488 141 ----------RIVQA---AG-----GRPLHDFGLRRAHGLEA------AVAAAraaylAG---------FAGTSNVLAGR 187
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  221 KYGVKPIGTVAHEWVMgvasisedyLHAN-KNAMDCWINTFGAKNAglALTDTFGT-----------DDFLKSFRPpysd 288
Cdd:COG1488 188 YYGIPSVGTMAHSFVQ---------AHDDeLEAFRAFAEAYPDGTT--LLVDTYDTlsgvpnaielaKELLARGGL---- 252
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  289 ayVGVRQDSGDPVEYTKKI-----SHHYHDVlklpkfsKIIcYSDSLNVEKAIT-YSHAAKENGmlatFGIGTNFTndfr 362
Cdd:COG1488 253 --LGIRLDSGDLAYLSKQArelldEAGLPDV-------RII-ASDDLDEYRIAAlLEQGAPIDV----FGVGTRLV---- 314
                       410       420       430       440
                ....*....|....*....|....*....|....*....|
gi 6324783  363 kksepQVKSEP-LNIVIKLLEVNGNHA----IKISDNLGK 397
Cdd:COG1488 315 -----TSSDRPtLGFVYKLVAVEGDGEwrpvIKLSETPGK 349
NAPRTase_A cd01570
Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate ...
10-357 2.54e-17

Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi).


Pssm-ID: 238804 [Multi-domain]  Cd Length: 327  Bit Score: 82.24  E-value: 2.54e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   10 LDTDMYKITMHAAVFT-NFPDVTVTYKYTNRSsqLTFNKEAINW--LKEQFSYLGNLRFTEEEIEYLKQEIPYLPsAYIK 86
Cdd:cd01570   2 LLTDLYQLTMAQAYWKeGKHNKPAVFELFFRK--LPFGGGYAVFagLEELLEYLENFRFTEEDIDYLRSLGIFDE-EFLD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   87 YISSSNYKL----HPEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLISeayfkfvdidwdYENQLeqAEK 162
Cdd:cd01570  79 YLRGFRFTGtiyaIPEGEVVFPNEPL----------LTVEGPLIEAQLLETLLLNLIN------------FQTLI--ATK 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  163 KAE-TLFDNGIRFSEFGTRRrrslkAQDliMQGIMKAvngnpdrNKSLLLG----TSNILFAKKYGVKPIGTVAHEWVMG 237
Cdd:cd01570 135 AARvRLAAGGRPLLEFGLRR-----AQG--PDAALSA-------ARAAYIGgfdgTSNVLAGKLYGIPVSGTMAHSFVQA 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783  238 VASisedylhaNKNAMDCWINTFgaKNAGLALTDTF-----GTDDFLKSFRPPYSDAY--VGVRQDSGDPVEYTKKISHH 310
Cdd:cd01570 201 FDD--------ELAAFRAFAEAY--PDNFTLLVDTYdtlrsGLPNAIAVAKELGALGYrlVGVRIDSGDLAYLSKEARKM 270
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 6324783  311 YhDVLKLPKFSkiICYSDSLNvEKAITYshAAKENGMLATFGIGTNF 357
Cdd:cd01570 271 L-DEAGLTKVK--IVASNDLD-EYTIAA--LNAQGAPIDAFGVGTRL 311
NAPRTase_put TIGR01513
putative nicotinate phosphoribosyltransferase; A deep split separates two related families of ...
10-397 2.99e-16

putative nicotinate phosphoribosyltransferase; A deep split separates two related families of proteins, one of which includes experimentally characterized examples of nicotinate phosphoribosyltransferase, an the first enzyme of NAD salvage biosynthesis. This model represents the other family. Members have a different (longer) spacing of several key motifs and have an additional C-terminal domain of up to 100 residues. One argument suggesting that this family represents the same enzyme is that no species has a member of both families. Another is that the gene encoding this protein is located near other NAD salvage biosynthesis genes in Nostoc and in at least four different Gram-positive bacteria. NAD and NADP are ubiquitous in life. Most members of this family are Gram-positive bacteria. An additional set of mutually closely related archaeal sequences score between the trusted and noise cutoffs. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 273666 [Multi-domain]  Cd Length: 443  Bit Score: 80.48  E-value: 2.99e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     10 LDTDMYKITMHAAVFTNFPDVTVTYkYTNRSSQLTFNKEAINW--LKEQFSYLGNLRFTEEEIEYLKQeIPYLPSAYIKY 87
Cdd:TIGR01513   2 LLTDLYELTMAQGYFREGKANQPAV-FEVFFRKLPFGRGYAVFagLEDLLEFLENFRFDAEDIEYLAS-LGIFDDAFLDY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     88 ISSSNYKLH----PEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLISeayfkfvdidwdYENQLeqAEKK 163
Cdd:TIGR01513  80 LREFRFSGTvralPEGSLVFPNEPL----------LQVEGPLIEAQLLETLVLNIIN------------FQTLI--ATKA 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    164 AE-TLFDNGIRFSEFGTRRRRSLKAQdliMQGIMKAVNGNPDrnkslllGTSNILFAKKYGVKPIGTVAHEWVMGVASiS 242
Cdd:TIGR01513 136 ARiVLAAGGKPLLEFGLRRAQGPDAA---LKAARAAYIGGAD-------GTSNVLAGRLYGIPVSGTMAHSFVMSFDN-E 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    243 EDYLHA-----NKNAM------DCWinTFGAKNAgLALTDTFGTDDFLksfrppysdayVGVRQDSGDPVEYTKKISHHY 311
Cdd:TIGR01513 205 LAAFRAyaklyPKATVllvdtyDTL--RSGLPNA-IAVAKELGEQGKV-----------VGVRIDSGDLLYLSKQARKQL 270
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    312 hDVLKLPKfSKIICySDSLNvEKAITYSHAakENGMLATFGIGTNFTNdfrkksepqVKSEP-LNIVIKLLEVNGNHAIK 390
Cdd:TIGR01513 271 -DAAGLTQ-VKIVV-SNDLD-ENSIAALKA--EGAPIDVYGVGTSLVT---------ASDAPaLGGVYKLVAYEGRPVMK 335

                  ....*..
gi 6324783    391 ISDNLGK 397
Cdd:TIGR01513 336 LSENPEK 342
PLN02885 PLN02885
nicotinate phosphoribosyltransferase
4-397 8.09e-15

nicotinate phosphoribosyltransferase


Pssm-ID: 178473 [Multi-domain]  Cd Length: 545  Bit Score: 76.23  E-value: 8.09e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783     4 PVIKSLLdTDMYKITMHAAVFTNfpdvtvtYKYTNRSS-QLTFNKEAINW-------LKEQFSYLGNLRFTEEEIEYLKQ 75
Cdd:PLN02885   8 PMVTPLL-TDLYQFTMAYAYWKA-------GKHLDRAVfDLFFRKNPFGGeytvfagLEECLRFIANFKFTDDDIDFLRS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    76 EIP-YLPSAYIKYISS---SNYKLH--PEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLIS--------E 141
Cdd:PLN02885  80 VMPsGCEDAFFDYLRGldcSDVEVYaiPEGSVVFPRVPL----------MRIEGPLAVVQLLETTFLTLVNyaslvatnA 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   142 AYFKFVdidwdyenqleqAEKKAETLfdngirfsEFGTRRrrslkAQdlimqgimkAVNGNPDRNKSLLLG----TSNIL 217
Cdd:PLN02885 150 ARHRLV------------AGKSKVLL--------EFGLRR-----AQ---------GPDGGISASKYCYLGgfdaTSNVE 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   218 FAKKYGVKPIGTVAHEWV---MGVASISEDYLHANKNAMDC---------WIN----------TFGAKNAG--------- 266
Cdd:PLN02885 196 AGRLFGIPVRGTHSHAFVssyMGLDEIVDKTLRSADGSSVCedfvslvqeWLSklqessslrgVFSETNQSelaaftsya 275
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   267 -------LALTDTFgtdDFLKSFRPPY--------SDAY--VGVRQDSGDpVEY----TKKISHHYHDVLKLPKFSK-II 324
Cdd:PLN02885 276 lafpnsfLALVDTY---DVMKSGIPNFcavalalnDLGYkaVGIRLDSGD-LAYlsleARKFFRTIEEELGVPGFGKmSI 351
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6324783   325 CYSDSLNvEKAItysHAAKENGMLAT-FGIGTNFTNDFRKKSepqvksepLNIVIKLLEVNGNHAIKISDNLGK 397
Cdd:PLN02885 352 TASNDIN-EETL---DALNKQGHEIDaFGIGTHLVTCYAQPA--------LGCVYKLVEINGQPRIKLSEDVEK 413
PRK09243 PRK09243
nicotinate phosphoribosyltransferase; Validated
10-397 3.95e-14

nicotinate phosphoribosyltransferase; Validated


Pssm-ID: 236426 [Multi-domain]  Cd Length: 464  Bit Score: 74.04  E-value: 3.95e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    10 LDTDMYKITM-----------HAAVFtnfpDVTVtykytnRssQLTFN---------KEAINWLKeqfsylgNLRFTEEE 69
Cdd:PRK09243  11 LLTDLYELTMaqaylrdgihnRRAVF----ELFF------R--KLPFGrgyavfaglERLLEYLE-------NLRFTEED 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    70 IEYLKQEIPYLPsAYIKYISssNYKL------HPEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLI---- 139
Cdd:PRK09243  72 IEYLRSLGIFDE-DFLDYLR--NFRFtgdvraVPEGELVFPNEPL----------LRVEGPLAEAQLLETLLLNIInfqt 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   140 ---SEAyfkfvdidwdyeNQLEQAekkAEtlfdnGIRFSEFGTRRrrslkaqdliMQGIMKAVNGNpdrnKSLLLG---- 212
Cdd:PRK09243 139 liaTKA------------ARIVSA---AG-----GRPLLEFGSRR----------AQGPDAAVWAA----RAAYIGgfda 184
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   213 TSNILFAKKYGVKPIGTVAHEWVMgvasisedyLHAN-KNAMDCWINTFGaKNAGLaLTDTFgtdDFLKS--------FR 283
Cdd:PRK09243 185 TSNVLAGKRYGIPVSGTMAHSFVQ---------AFDDeYEAFRAYAETYP-DNTVL-LVDTY---DTLKSgvpnaikvAK 250
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   284 PPYSDAYV-GVRQDSGDPVEYTKKI-----SHHYHDVlklpkfsKIICySDSLNvEKAITY--SHAAKENGmlatFGIGT 355
Cdd:PRK09243 251 ELGDGIELgGVRIDSGDLAYLSKKVrkmldEAGFTDT-------KIVA-SNDLD-EYTIASlkLQGAPIDG----FGVGT 317
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 6324783   356 NF-TNdfrkKSEPqvksePLNIVIKLLEVNGNHA----IKISDNLGK 397
Cdd:PRK09243 318 KLvTG----SDAP-----ALGGVYKLVAIEGEGGmipkIKLSNSPEK 355
PRK12484 PRK12484
nicotinate phosphoribosyltransferase; Provisional
10-306 1.85e-07

nicotinate phosphoribosyltransferase; Provisional


Pssm-ID: 237112 [Multi-domain]  Cd Length: 443  Bit Score: 53.21  E-value: 1.85e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    10 LDTDMYKITMHAAVFTNFPDVTVTYK--YTNRSSQLTFNKEAinWLKEQFSYLGNLRFTEEEIEYLKQEIpYLPSAYIKY 87
Cdd:PRK12484   6 LLTDLYEVTMANAYLREGMSAPATFSlfYRKLPDGRGFLIAA--GLADVVEFLEAFRFDEQDLRYLRGLN-QFSEEFLAW 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783    88 IS----SSNYKLHPEEQISFTSEEIegkpthyklkILVSGSWKDTILYEIPLLSLISeayfkfvdidwdyeNQLEQAEKK 163
Cdd:PRK12484  83 LAglrfTGDVRAVPEGTVVFPNEPL----------LEVTAPLIEAQLVETFLLNQIN--------------HQSLIASKA 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324783   164 AE-TLFDNGIRFSEFGTRRRRSLKAQdliMQGIMKAVNGNpdrnkslLLGTSNILFAKKYGVKPIGTVAHEWVMGVAS-- 240
Cdd:PRK12484 139 ARcVLAAAGRPVVDFGARRAHGTDAA---CYVARASYLAG-------AAGTSNVLAARQYGIPASGTMAHSFVEAFPDev 208
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6324783   241 -----ISEDYLHANKNAMDCWINTFGAKNAGLALTDtfgtddfLKSFRPPysdayVGVRQDSGDPVEYTKK 306
Cdd:PRK12484 209 aafraFARLYPDATTLLVDTYDTLRGVRNAIEVAKE-------LGNRFDP-----RGVRLDSGDLAELSKA 267
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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