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Conserved domains on  [gi|6324789|ref|NP_014858|]
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Aim41p [Saccharomyces cerevisiae S288C]

Protein Classification

GatB/YqeY domain-containing protein( domain architecture ID 1908736)

GatB/YqeY domain-containing protein similar to Saccharomyces cerevisiae mitochondrial altered inheritance of mitochondria protein 41

CATH:  1.10.10.410|1.10.1510.10
PubMed:  17284460
SCOP:  4003788

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YqeY super family cl43467
Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity [General ...
 32-116 2.68e-20

Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity [General function prediction only];


The actual alignment was detected with superfamily member COG1610:

Pssm-ID: 441218 [Multi-domain]  Cd Length: 147  Bit Score: 82.02  E-value: 2.68e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324789   32 LKGDLKKAMIAKDEMKKTAIRNMLSAIKNKEIALKGKSADEYSLyDMYSKLISQRKDSINEFLANKRDDLVAKEQGEMDI 111
Cdd:COG1610   7 LNEDLKAAMKAKDKVRLSTLRMILAAIKNREIDERRELDDEEVL-AVLQKMVKQRRESIEQYEKAGRPDLAEKEEAEIAI 85


                ....*
gi 6324789  112 IKKYM 116
Cdd:COG1610  86 LEEYL 90
 
Name Accession Description Interval E-value
YqeY COG1610
Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity [General ...
 32-116 2.68e-20

Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity [General function prediction only];


Pssm-ID: 441218 [Multi-domain]  Cd Length: 147  Bit Score: 82.02  E-value: 2.68e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324789   32 LKGDLKKAMIAKDEMKKTAIRNMLSAIKNKEIALKGKSADEYSLyDMYSKLISQRKDSINEFLANKRDDLVAKEQGEMDI 111
Cdd:COG1610   7 LNEDLKAAMKAKDKVRLSTLRMILAAIKNREIDERRELDDEEVL-AVLQKMVKQRRESIEQYEKAGRPDLAEKEEAEIAI 85


                ....*
gi 6324789  112 IKKYM 116
Cdd:COG1610  86 LEEYL 90
YqeY pfam09424
Yqey-like protein; The function of this domain found in the YqeY protein is uncertain.
 32-118 2.31e-18

Yqey-like protein; The function of this domain found in the YqeY protein is uncertain.


Pssm-ID: 430602 [Multi-domain]  Cd Length: 143  Bit Score: 77.26  E-value: 2.31e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324789     32 LKGDLKKAMIAKDEMKKTAIRNMLSAIKNKEIALKGKSADEYSLyDMYSKLISQRKDSINEFLANKRDDLVAKEQGEMDI 111
Cdd:pfam09424   4 LNEDMKEAMKAKDKDRLSTLRMLKAAIKQEEVDERKELTDEEVL-AVLAKEVKQRRESIEQFEKAGRQDLAEKERAEIAI 82


                  ....*..
gi 6324789    112 IKKYMDQ 118
Cdd:pfam09424  83 LEEYLPQ 89
 
Name Accession Description Interval E-value
YqeY COG1610
Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity [General ...
 32-116 2.68e-20

Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity [General function prediction only];


Pssm-ID: 441218 [Multi-domain]  Cd Length: 147  Bit Score: 82.02  E-value: 2.68e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324789   32 LKGDLKKAMIAKDEMKKTAIRNMLSAIKNKEIALKGKSADEYSLyDMYSKLISQRKDSINEFLANKRDDLVAKEQGEMDI 111
Cdd:COG1610   7 LNEDLKAAMKAKDKVRLSTLRMILAAIKNREIDERRELDDEEVL-AVLQKMVKQRRESIEQYEKAGRPDLAEKEEAEIAI 85


                ....*
gi 6324789  112 IKKYM 116
Cdd:COG1610  86 LEEYL 90
YqeY pfam09424
Yqey-like protein; The function of this domain found in the YqeY protein is uncertain.
 32-118 2.31e-18

Yqey-like protein; The function of this domain found in the YqeY protein is uncertain.


Pssm-ID: 430602 [Multi-domain]  Cd Length: 143  Bit Score: 77.26  E-value: 2.31e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324789     32 LKGDLKKAMIAKDEMKKTAIRNMLSAIKNKEIALKGKSADEYSLyDMYSKLISQRKDSINEFLANKRDDLVAKEQGEMDI 111
Cdd:pfam09424   4 LNEDMKEAMKAKDKDRLSTLRMLKAAIKQEEVDERKELTDEEVL-AVLAKEVKQRRESIEQFEKAGRQDLAEKERAEIAI 82


                  ....*..
gi 6324789    112 IKKYMDQ 118
Cdd:pfam09424  83 LEEYLPQ 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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