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Conserved domains on  [gi|6325240|ref|NP_015308|]
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Irc15p [Saccharomyces cerevisiae S288C]

Protein Classification

dihydrolipoyl dehydrogenase family protein( domain architecture ID 11441193)

dihydrolipoyl dehydrogenase family protein belonging to the class-I pyridine nucleotide-disulfide oxidoreductase superfamily may function as a FAD/NAD(P)-dependent oxidoreductase, similar to dihydrolipoyl dehydrogenase which catalyzes the oxidation of dihydrolipoamide to lipoamide and is often a component of multienzyme 2-oxo-acid dehydrogenase complexes

EC:  1.-.-.-
Gene Ontology:  GO:0016491|GO:0000166
SCOP:  4000121

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
18-487 3.61e-118

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


:

Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 354.78  E-value: 3.61e-118
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRAsLGGAYLVDGAVPSKTLLYESYLYRLLQQqelIEQRGTRLFPAKFDM 97
Cdd:COG1249   4 YDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGR-LGGTCLNVGCIPSKALLHAAEVAHEARH---AAEFGISAGAPSVDW 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   98 QAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAqrGMKpfIVEAKYIVVATGSAVIQCPGVAIDNDKI 177
Cdd:COG1249  80 AALMARKDKVVDRLRGGVEELLKKNGVDVIRGRARFVDPHTVEVT--GGE--TLTADHIVIATGSRPRVPPIPGLDEVRV 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  178 ISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQLA 257
Cdd:COG1249 156 LTSDEALELEELPKSLVVIGGGYIGLEFAQIFARLGSEVTLVERGDRLLPGEDPEISEALEKALEKEGIDILTGAKVTSV 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  258 EADAAGqlnITLLNKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSllKYPHIKPIGDVTL 335
Cdd:COG1249 236 EKTGDG---VTVTLEDGGGEEAVEADKVLVATGRRPNTDGLGLEAAGveLDERGGIK-VDEYLRT--SVPGIYAIGDVTG 309
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  336 GPMLALKAEEQAIRAIQSIgctgsdgtsnCGFP---------PNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQNV 406
Cdd:COG1249 310 GPQLAHVASAEGRVAAENI----------LGKKprpvdyraiPSVVFTDPEIASVGLTEEEAREAGIDVKVGKFPFAANG 379
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  407 RYNTLlpREENTtvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQAVQLA 486
Cdd:COG1249 380 RALAL--GETEG----FVKLIADAETGRILGAHIVGPHAGELIHEAALAMEMGLTVEDLADTIHAHPTLSEALKEAALAL 453

                .
gi 6325240  487 M 487
Cdd:COG1249 454 L 454
 
Name Accession Description Interval E-value
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
18-487 3.61e-118

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 354.78  E-value: 3.61e-118
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRAsLGGAYLVDGAVPSKTLLYESYLYRLLQQqelIEQRGTRLFPAKFDM 97
Cdd:COG1249   4 YDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGR-LGGTCLNVGCIPSKALLHAAEVAHEARH---AAEFGISAGAPSVDW 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   98 QAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAqrGMKpfIVEAKYIVVATGSAVIQCPGVAIDNDKI 177
Cdd:COG1249  80 AALMARKDKVVDRLRGGVEELLKKNGVDVIRGRARFVDPHTVEVT--GGE--TLTADHIVIATGSRPRVPPIPGLDEVRV 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  178 ISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQLA 257
Cdd:COG1249 156 LTSDEALELEELPKSLVVIGGGYIGLEFAQIFARLGSEVTLVERGDRLLPGEDPEISEALEKALEKEGIDILTGAKVTSV 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  258 EADAAGqlnITLLNKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSllKYPHIKPIGDVTL 335
Cdd:COG1249 236 EKTGDG---VTVTLEDGGGEEAVEADKVLVATGRRPNTDGLGLEAAGveLDERGGIK-VDEYLRT--SVPGIYAIGDVTG 309
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  336 GPMLALKAEEQAIRAIQSIgctgsdgtsnCGFP---------PNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQNV 406
Cdd:COG1249 310 GPQLAHVASAEGRVAAENI----------LGKKprpvdyraiPSVVFTDPEIASVGLTEEEAREAGIDVKVGKFPFAANG 379
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  407 RYNTLlpREENTtvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQAVQLA 486
Cdd:COG1249 380 RALAL--GETEG----FVKLIADAETGRILGAHIVGPHAGELIHEAALAMEMGLTVEDLADTIHAHPTLSEALKEAALAL 453

                .
gi 6325240  487 M 487
Cdd:COG1249 454 L 454
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
18-482 8.11e-98

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 302.87  E-value: 8.11e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDqRASLGGAYLVDGAVPSKTLLYESYLYRLLQQqelIEQRGTRLFPAKFDM 97
Cdd:PRK06292   4 YDVIVIGAGPAGYVAARRAAKLGKKVALIE-KGPLGGTCLNVGCIPSKALIAAAEAFHEAKH---AEEFGIHADGPKIDF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    98 QAAQSALKHNIEEL-GNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRgmkpfIVEAKYIVVATGSAVIQCPGV-AIDND 175
Cdd:PRK06292  80 KKVMARVRRERDRFvGGVVEGLEKKPKIDKIKGTARFVDPNTVEVNGE-----RIEAKNIVIATGSRVPPIPGVwLILGD 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   176 KIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQgIAFLLDTRVQ 255
Cdd:PRK06292 155 RLLTSDDAFELDKLPKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEDPEVSKQAQKILSKE-FKIKLGAKVT 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   256 LAEADAAGQLNITllnKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSllKYPHIKPIGDV 333
Cdd:PRK06292 234 SVEKSGDEKVEEL---EKGGKTETIEADYVLVATGRRPNTDGLGLENTGieLDERGRPV-VDEHTQT--SVPGIYAAGDV 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   334 TLGPMLALKAEEQAIRAIQSIGcTGSDGTSNCGFPPNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQNVRYNTLLp 413
Cdd:PRK06292 308 NGKPPLLHEAADEGRIAAENAA-GDVAGGVRYHPIPSVVFTDPQIASVGLTEEELKAAGIDYVVGEVPFEAQGRARVMG- 385
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6325240   414 REENttvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQA 482
Cdd:PRK06292 386 KNDG-----FVKVYADKKTGRLLGAHIIGPDAEHLIHLLAWAMQQGLTVEDLLRMPFYHPTLSEGLRTA 449
lipoamide_DH TIGR01350
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ...
18-486 3.64e-97

dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.


Pssm-ID: 273568 [Multi-domain]  Cd Length: 460  Bit Score: 301.10  E-value: 3.64e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRaSLGGAYLVDGAVPSKTLLYESYLYRLLQQqelIEQRGTRLFPAKFDM 97
Cdd:TIGR01350   2 YDVIVIGGGPGGYVAAIRAAQLGLKVALVEKE-YLGGTCLNVGCIPTKALLHSAEVYDEIKH---AKDLGIEVENVSVDW 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     98 QAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPfIVEAKYIVVATGSAVIQCPG-VAIDNDK 176
Cdd:TIGR01350  78 EKMQKRKNKVVKKLVGGVSGLLKKNKVTVIKGEAKFLDPGTVSVTGENGEE-TLEAKNIIIATGSRPRSLPGpFDFDGKV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    177 IISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQL 256
Cdd:TIGR01350 157 VITSTGALNLEEVPESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRILPGEDAEVSKVLQKALKKKGVKILTNTKVTA 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    257 AEADaAGQLNITLLNKVSKKTYVhhcDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSLLkyPHIKPIGDVT 334
Cdd:TIGR01350 237 VEKN-DDQVTYENKGGETETLTG---EKVLVAVGRKPNTEGLGLEKLGveLDERGRIV-VDEYMRTNV--PGIYAIGDVI 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    335 LGPMLALKAEEQAIRAIQSIgctgsdgtsnCGFP---------PNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQN 405
Cdd:TIGR01350 310 GGPMLAHVASHEGIVAAENI----------AGKEpahidydavPSVIYTDPEVASVGLTEEQAKEAGYDVKIGKFPFAAN 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    406 VRYNTLLPREenttvsPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQAVQL 485
Cdd:TIGR01350 380 GKALALGETD------GFVKIIADKKTGEILGAHIIGPHATELISEAALAMELEGTVEELARTIHPHPTLSEAIKEAALA 453

                  .
gi 6325240    486 A 486
Cdd:TIGR01350 454 A 454
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
18-347 1.64e-43

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 155.94  E-value: 1.64e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDqrasLGGAYLVDGAVPSKTLLYESylyrllqqqeliEQRGTRLFPAKFdm 97
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIE----DEGTCPYGGCVLSKALLGAA------------EAPEIASLWADL-- 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     98 qaAQSALKHnIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEiaqrgMKPFIVEAKYIVVATGSAVI--QCPGV---AI 172
Cdd:pfam07992  63 --YKRKEEV-VKKLNNGIEVLLGTEVVSIDPGAKKVVLEELVD-----GDGETITYDRLVIATGARPRlpPIPGVelnVG 134
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    173 DNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDT 252
Cdd:pfam07992 135 FLVRTLDSAEALRLKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLRAFDEEISAALEKALEKNGVEVRLGT 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    253 RVQLAEADAAGQLNITllnkvSKKTYVhHCDVLMVSIGRRPLLKGLDISSIGLDERDFVEnVDVQTQSllKYPHIKPIGD 332
Cdd:pfam07992 215 SVKEIIGDGDGVEVIL-----KDGTEI-DADLVVVAIGRRPNTELLEAAGLELDERGGIV-VDEYLRT--SVPGIYAAGD 285
                         330
                  ....*....|....*.
gi 6325240    333 VT-LGPMLALKAEEQA 347
Cdd:pfam07992 286 CRvGGPELAQNAVAQG 301
 
Name Accession Description Interval E-value
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
18-487 3.61e-118

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 354.78  E-value: 3.61e-118
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRAsLGGAYLVDGAVPSKTLLYESYLYRLLQQqelIEQRGTRLFPAKFDM 97
Cdd:COG1249   4 YDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGR-LGGTCLNVGCIPSKALLHAAEVAHEARH---AAEFGISAGAPSVDW 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   98 QAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAqrGMKpfIVEAKYIVVATGSAVIQCPGVAIDNDKI 177
Cdd:COG1249  80 AALMARKDKVVDRLRGGVEELLKKNGVDVIRGRARFVDPHTVEVT--GGE--TLTADHIVIATGSRPRVPPIPGLDEVRV 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  178 ISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQLA 257
Cdd:COG1249 156 LTSDEALELEELPKSLVVIGGGYIGLEFAQIFARLGSEVTLVERGDRLLPGEDPEISEALEKALEKEGIDILTGAKVTSV 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  258 EADAAGqlnITLLNKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSllKYPHIKPIGDVTL 335
Cdd:COG1249 236 EKTGDG---VTVTLEDGGGEEAVEADKVLVATGRRPNTDGLGLEAAGveLDERGGIK-VDEYLRT--SVPGIYAIGDVTG 309
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  336 GPMLALKAEEQAIRAIQSIgctgsdgtsnCGFP---------PNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQNV 406
Cdd:COG1249 310 GPQLAHVASAEGRVAAENI----------LGKKprpvdyraiPSVVFTDPEIASVGLTEEEAREAGIDVKVGKFPFAANG 379
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  407 RYNTLlpREENTtvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQAVQLA 486
Cdd:COG1249 380 RALAL--GETEG----FVKLIADAETGRILGAHIVGPHAGELIHEAALAMEMGLTVEDLADTIHAHPTLSEALKEAALAL 453

                .
gi 6325240  487 M 487
Cdd:COG1249 454 L 454
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
18-482 8.11e-98

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 302.87  E-value: 8.11e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDqRASLGGAYLVDGAVPSKTLLYESYLYRLLQQqelIEQRGTRLFPAKFDM 97
Cdd:PRK06292   4 YDVIVIGAGPAGYVAARRAAKLGKKVALIE-KGPLGGTCLNVGCIPSKALIAAAEAFHEAKH---AEEFGIHADGPKIDF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    98 QAAQSALKHNIEEL-GNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRgmkpfIVEAKYIVVATGSAVIQCPGV-AIDND 175
Cdd:PRK06292  80 KKVMARVRRERDRFvGGVVEGLEKKPKIDKIKGTARFVDPNTVEVNGE-----RIEAKNIVIATGSRVPPIPGVwLILGD 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   176 KIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQgIAFLLDTRVQ 255
Cdd:PRK06292 155 RLLTSDDAFELDKLPKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEDPEVSKQAQKILSKE-FKIKLGAKVT 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   256 LAEADAAGQLNITllnKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSllKYPHIKPIGDV 333
Cdd:PRK06292 234 SVEKSGDEKVEEL---EKGGKTETIEADYVLVATGRRPNTDGLGLENTGieLDERGRPV-VDEHTQT--SVPGIYAAGDV 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   334 TLGPMLALKAEEQAIRAIQSIGcTGSDGTSNCGFPPNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQNVRYNTLLp 413
Cdd:PRK06292 308 NGKPPLLHEAADEGRIAAENAA-GDVAGGVRYHPIPSVVFTDPQIASVGLTEEELKAAGIDYVVGEVPFEAQGRARVMG- 385
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6325240   414 REENttvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQA 482
Cdd:PRK06292 386 KNDG-----FVKVYADKKTGRLLGAHIIGPDAEHLIHLLAWAMQQGLTVEDLLRMPFYHPTLSEGLRTA 449
lipoamide_DH TIGR01350
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ...
18-486 3.64e-97

dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.


Pssm-ID: 273568 [Multi-domain]  Cd Length: 460  Bit Score: 301.10  E-value: 3.64e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRaSLGGAYLVDGAVPSKTLLYESYLYRLLQQqelIEQRGTRLFPAKFDM 97
Cdd:TIGR01350   2 YDVIVIGGGPGGYVAAIRAAQLGLKVALVEKE-YLGGTCLNVGCIPTKALLHSAEVYDEIKH---AKDLGIEVENVSVDW 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     98 QAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPfIVEAKYIVVATGSAVIQCPG-VAIDNDK 176
Cdd:TIGR01350  78 EKMQKRKNKVVKKLVGGVSGLLKKNKVTVIKGEAKFLDPGTVSVTGENGEE-TLEAKNIIIATGSRPRSLPGpFDFDGKV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    177 IISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQL 256
Cdd:TIGR01350 157 VITSTGALNLEEVPESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRILPGEDAEVSKVLQKALKKKGVKILTNTKVTA 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    257 AEADaAGQLNITLLNKVSKKTYVhhcDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSLLkyPHIKPIGDVT 334
Cdd:TIGR01350 237 VEKN-DDQVTYENKGGETETLTG---EKVLVAVGRKPNTEGLGLEKLGveLDERGRIV-VDEYMRTNV--PGIYAIGDVI 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    335 LGPMLALKAEEQAIRAIQSIgctgsdgtsnCGFP---------PNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQN 405
Cdd:TIGR01350 310 GGPMLAHVASHEGIVAAENI----------AGKEpahidydavPSVIYTDPEVASVGLTEEQAKEAGYDVKIGKFPFAAN 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    406 VRYNTLLPREenttvsPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQAVQL 485
Cdd:TIGR01350 380 GKALALGETD------GFVKIIADKKTGEILGAHIIGPHATELISEAALAMELEGTVEELARTIHPHPTLSEAIKEAALA 453

                  .
gi 6325240    486 A 486
Cdd:TIGR01350 454 A 454
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
14-486 1.37e-91

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 286.66  E-value: 1.37e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    14 FAAVYDVLVIGCGPGGFTAAMQASQAGLLTACVDqRASLGGAYLVDGAVPSKTLLYESYLYRLLQQQElieQRGTRLFPA 93
Cdd:PRK06416   1 FAFEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVE-KEKLGGTCLNRGCIPSKALLHAAERADEARHSE---DFGIKAENV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    94 KFDMQAAQsALKHN-IEEL-GNVyKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPfIVEAKYIVVATGSAVIQCPGVA 171
Cdd:PRK06416  77 GIDFKKVQ-EWKNGvVNRLtGGV-EGLLKKNKVDIIRGEAKLVDPNTVRVMTEDGEQ-TYTAKNIILATGSRPRELPGIE 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   172 IDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLD 251
Cdd:PRK06416 154 IDGRVIWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILPGEDKEISKLAERALKKRGIKIKTG 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   252 TRVQLAEADAAGqlnITLLNKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIGLD-ERDFVEnVDVQTQSLLkyPHIKPI 330
Cdd:PRK06416 234 AKAKKVEQTDDG---VTVTLEDGGKEETLEADYVLVAVGRRPNTENLGLEELGVKtDRGFIE-VDEQLRTNV--PNIYAI 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   331 GDVTLGPMLALKAEEQAIRAIQSIgctgsdgtsnCGFP--------PNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLF 402
Cdd:PRK06416 308 GDIVGGPMLAHKASAEGIIAAEAI----------AGNPhpidyrgiPAVTYTHPEVASVGLTEAKAKEEGFDVKVVKFPF 377
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   403 SQNVRYNTLlpreeNTTvSPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQA 482
Cdd:PRK06416 378 AGNGKALAL-----GET-DGFVKLIFDKKDGEVLGAHMVGARASELIQEAQLAINWEATPEDLALTIHPHPTLSEALGEA 451

                 ....
gi 6325240   483 VQLA 486
Cdd:PRK06416 452 ALAA 455
PRK06327 PRK06327
dihydrolipoamide dehydrogenase; Validated
18-488 4.59e-87

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235779 [Multi-domain]  Cd Length: 475  Bit Score: 275.27  E-value: 4.59e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQ------RASLGGAYLVDGAVPSKTLLYESYLYRllQQQELIEQRGTRLF 91
Cdd:PRK06327   5 FDVVVIGAGPGGYVAAIRAAQLGLKVACIEAwknpkgKPALGGTCLNVGCIPSKALLASSEEFE--NAGHHFADHGIHVD 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    92 PAKFD---MQAAQSAL-KHNIEELGNVYKrelsKNNVTVYKGTAAF--KDPHHVEIAQRGMKPFIVEAKYIVVATGSAVI 165
Cdd:PRK06327  83 GVKIDvakMIARKDKVvKKMTGGIEGLFK----KNKITVLKGRGSFvgKTDAGYEIKVTGEDETVITAKHVIIATGSEPR 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   166 QCPGVAIDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQG 245
Cdd:PRK06327 159 HLPGVPFDNKIILDNTGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGAEVTILEALPAFLAAADEQVAKEAAKAFTKQG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   246 IAFLLDTRVQLAEADAAGqLNITLLNKVSK-KTYVhhCDVLMVSIGRRPLLKGLDISSIGL--DERDFVEnVDVQTQSLL 322
Cdd:PRK06327 239 LDIHLGVKIGEIKTGGKG-VSVAYTDADGEaQTLE--VDKLIVSIGRVPNTDGLGLEAVGLklDERGFIP-VDDHCRTNV 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   323 kyPHIKPIGDVTLGPMLALKAEEQAIRAIQSIgcTGSDGTSNCGFPPNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLF 402
Cdd:PRK06327 315 --PNVYAIGDVVRGPMLAHKAEEEGVAVAERI--AGQKGHIDYNTIPWVIYTSPEIAWVGKTEQQLKAEGVEYKAGKFPF 390
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   403 SQNVRYNTLLpreeNTTvsPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQA 482
Cdd:PRK06327 391 MANGRALAMG----EPD--GFVKIIADAKTDEILGVHVIGPNASELIAEAVVAMEFKASSEDIARICHAHPTLSEVWHEA 464

                 ....*.
gi 6325240   483 vqlAMA 488
Cdd:PRK06327 465 ---ALA 467
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
18-455 7.66e-68

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 225.04  E-value: 7.66e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGAYLVDGAVPSKTLLYE-SYLYRLLQQQELIEQRGTRLFPAKFD 96
Cdd:PRK05249   6 YDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYRNVGGGCTHTGTIPSKALREAvLRLIGFNQNPLYSSYRVKLRITFADL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    97 MQAAQSALKHNIEelgnVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPFIVEAKYIVVATGSAVIQCPGVAIDNDK 176
Cdd:PRK05249  86 LARADHVINKQVE----VRRGQYERNRVDLIQGRARFVDPHTVEVECPDGEVETLTADKIVIATGSRPYRPPDVDFDHPR 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   177 IISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQL 256
Cdd:PRK05249 162 IYDSDSILSLDHLPRSLIIYGAGVIGCEYASIFAALGVKVTLINTRDRLLSFLDDEISDALSYHLRDSGVTIRHNEEVEK 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   257 AEADAAGQlnITLLNkvSKKTYvhHCDVLMVSIGRRPLLKGLDISSIGL--DERDFVEnVDVQTQSllKYPHIKPIGDVT 334
Cdd:PRK05249 242 VEGGDDGV--IVHLK--SGKKI--KADCLLYANGRTGNTDGLNLENAGLeaDSRGQLK-VNENYQT--AVPHIYAVGDVI 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   335 LGPMLALKAEEQAIRAIQSIgcTGSDGTSNCGFPPNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQNVRYNTLlpr 414
Cdd:PRK05249 313 GFPSLASASMDQGRIAAQHA--VGEATAHLIEDIPTGIYTIPEISSVGKTEQELTAAKVPYEVGRARFKELARAQIA--- 387
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 6325240   415 eeNTTVSpFIKVLIDSRDMKILGVHMINDDANEL--LSQASMA 455
Cdd:PRK05249 388 --GDNVG-MLKILFHRETLEILGVHCFGERATEIihIGQAIME 427
PRK06370 PRK06370
FAD-containing oxidoreductase;
18-484 3.65e-52

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 183.48  E-value: 3.65e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVdQRASLGGAYLVDGAVPSKTLLYESYLYRLLQqqelieqRGTRL-----FP 92
Cdd:PRK06370   6 YDAIVIGAGQAGPPLAARAAGLGMKVALI-ERGLLGGTCVNTGCVPTKTLIASARAAHLAR-------RAAEYgvsvgGP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    93 AKFDMQAAQSALKHNIEELGNVYKRELSK-NNVTVYKGTAAFKDPHHVEIAQRgmkpfIVEAKYIVVATGS-AVI-QCPG 169
Cdd:PRK06370  78 VSVDFKAVMARKRRIRARSRHGSEQWLRGlEGVDVFRGHARFESPNTVRVGGE-----TLRAKRIFINTGArAAIpPIPG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   170 vaIDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFL 249
Cdd:PRK06370 153 --LDEVGYLTNETIFSLDELPEHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGPRLLPREDEDVAAAVREILEREGIDVR 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   250 LDTRVQLAEADAAGqlnITL-LNKVSKKTYVhHCDVLMVSIGRRP----LlkGLDISSIGLDERDFVEnVDVQTQSllKY 324
Cdd:PRK06370 231 LNAECIRVERDGDG---IAVgLDCNGGAPEI-TGSHILVAVGRVPntddL--GLEAAGVETDARGYIK-VDDQLRT--TN 301
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   325 PHIKPIGDVTLGPMLALKAEEQAIRAIQSIgcTGSDGTSNCGF-PPNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFS 403
Cdd:PRK06370 302 PGIYAAGDCNGRGAFTHTAYNDARIVAANL--LDGGRRKVSDRiVPYATYTDPPLARVGMTEAEARKSGRRVLVGTRPMT 379
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   404 QNVRynTLLPREEnttvSPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQAV 483
Cdd:PRK06370 380 RVGR--AVEKGET----QGFMKVVVDADTDRILGATILGVHGDEMIHEILDAMYAGAPYTTLSRAIHIHPTVSELIPTLA 453

                 .
gi 6325240   484 Q 484
Cdd:PRK06370 454 Q 454
PTZ00153 PTZ00153
lipoamide dehydrogenase; Provisional
18-485 1.73e-46

lipoamide dehydrogenase; Provisional


Pssm-ID: 173442 [Multi-domain]  Cd Length: 659  Bit Score: 171.64  E-value: 1.73e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVD-QRASLGGAYLVDGAVPSKTLLYESYLYRLLQQQELIEQRG--TRLFPAK 94
Cdd:PTZ00153 117 YDVGIIGCGVGGHAAAINAMERGLKVIIFTgDDDSIGGTCVNVGCIPSKALLYATGKYRELKNLAKLYTYGiyTNAFKNG 196
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    95 FDM-----QAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFK----DPHHVEIAQRG-------------MKPFIVe 152
Cdd:PTZ00153 197 KNDpvernQLVADTVQIDITKLKEYTQSVIDKLRGGIENGLKSKKfcknSEHVQVIYERGhivdkntikseksGKEFKV- 275
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   153 aKYIVVATGSAVIQCPGVAIDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNE 232
Cdd:PTZ00153 276 -KNIIIATGSTPNIPDNIEVDQKSVFTSDTAVKLEGLQNYMGIVGMGIIGLEFMDIYTALGSEVVSFEYSPQLLPLLDAD 354
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   233 LAS-ATKTLLQCQGIAFLLDTR--------------VQLAEADAAGQLNITLLNKVSKKTYVHHCdvlMVSIGRRPLLKG 297
Cdd:PTZ00153 355 VAKyFERVFLKSKPVRVHLNTLieyvragkgnqpviIGHSERQTGESDGPKKNMNDIKETYVDSC---LVATGRKPNTNN 431
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   298 LDISSIGLD-ERDFV---ENVDVQTQSLLKYPHIKPIGDVTLGPMLALKAEEQAIRAIQSIGCTG-----SDGTSNCGFP 368
Cdd:PTZ00153 432 LGLDKLKIQmKRGFVsvdEHLRVLREDQEVYDNIFCIGDANGKQMLAHTASHQALKVVDWIEGKGkenvnINVENWASKP 511
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   369 ------PNVLYCQPQIGWVGYTEEGLAKARIPYQKGR----------------VLFSQNVRYNTLLPREENTT--VSPFI 424
Cdd:PTZ00153 512 iiykniPSVCYTTPELAFIGLTEKEAKELYPPDNVGVeisfykanskvlcennISFPNNSKNNSYNKGKYNTVdnTEGMV 591
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6325240   425 KVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSE----SFKQAVQL 485
Cdd:PTZ00153 592 KIVYLKDTKEILGMFIVGSYASILIHEGVLAINLKLSVKDLAHMVHSHPTISEvldaAFKAIAGV 656
PRK06116 PRK06116
glutathione reductase; Validated
18-479 2.72e-46

glutathione reductase; Validated


Pssm-ID: 235701 [Multi-domain]  Cd Length: 450  Bit Score: 167.26  E-value: 2.72e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRAsLGGAYLVDGAVPSKTLLYESylyrllQQQELIEQR----GTRLFPA 93
Cdd:PRK06116   5 YDLIVIGGGSGGIASANRAAMYGAKVALIEAKR-LGGTCVNVGCVPKKLMWYGA------QIAEAFHDYapgyGFDVTEN 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    94 KFDMQAaqsaLKHN----IEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRgmkpfIVEAKYIVVATGS--AVIQC 167
Cdd:PRK06116  78 KFDWAK----LIANrdayIDRLHGSYRNGLENNGVDLIEGFARFVDAHTVEVNGE-----RYTADHILIATGGrpSIPDI 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   168 PGVaidnDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIA 247
Cdd:PRK06116 149 PGA----EYGITSDGFFALEELPKRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGDAPLRGFDPDIRETLVEEMEKKGIR 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   248 FLLDTRVQLAEADAAGQLNITLLNKVSkktyvHHCDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSllKYP 325
Cdd:PRK06116 225 LHTNAVPKAVEKNADGSLTLTLEDGET-----LTVDCLIWAIGREPNTDGLGLENAGvkLNEKGYII-VDEYQNT--NVP 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   326 HIKPIGDVTLGPML---ALKA-----------EEQAIRAIQSIgctgsdgtsncgfpPNVLYCQPQIGWVGYTEEglaKA 391
Cdd:PRK06116 297 GIYAVGDVTGRVELtpvAIAAgrrlserlfnnKPDEKLDYSNI--------------PTVVFSHPPIGTVGLTEE---EA 359
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   392 RIPYQKGRV-LFSQNVR--YNTLLPREENTtvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKV 468
Cdd:PRK06116 360 REQYGEDNVkVYRSSFTpmYTALTGHRQPC----LMKLVVVGKEEKVVGLHGIGFGADEMIQGFAVAIKMGATKADFDNT 435
                        490
                 ....*....|.
gi 6325240   469 PFPHPSLSESF 479
Cdd:PRK06116 436 VAIHPTAAEEF 446
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
18-347 1.64e-43

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 155.94  E-value: 1.64e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDqrasLGGAYLVDGAVPSKTLLYESylyrllqqqeliEQRGTRLFPAKFdm 97
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIE----DEGTCPYGGCVLSKALLGAA------------EAPEIASLWADL-- 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     98 qaAQSALKHnIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEiaqrgMKPFIVEAKYIVVATGSAVI--QCPGV---AI 172
Cdd:pfam07992  63 --YKRKEEV-VKKLNNGIEVLLGTEVVSIDPGAKKVVLEELVD-----GDGETITYDRLVIATGARPRlpPIPGVelnVG 134
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    173 DNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDT 252
Cdd:pfam07992 135 FLVRTLDSAEALRLKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLRAFDEEISAALEKALEKNGVEVRLGT 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    253 RVQLAEADAAGQLNITllnkvSKKTYVhHCDVLMVSIGRRPLLKGLDISSIGLDERDFVEnVDVQTQSllKYPHIKPIGD 332
Cdd:pfam07992 215 SVKEIIGDGDGVEVIL-----KDGTEI-DADLVVVAIGRRPNTELLEAAGLELDERGGIV-VDEYLRT--SVPGIYAAGD 285
                         330
                  ....*....|....*.
gi 6325240    333 VT-LGPMLALKAEEQA 347
Cdd:pfam07992 286 CRvGGPELAQNAVAQG 301
PLN02507 PLN02507
glutathione reductase
18-479 2.30e-43

glutathione reductase


Pssm-ID: 215281 [Multi-domain]  Cd Length: 499  Bit Score: 160.37  E-value: 2.30e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACV---------DQRASLGGAYLVDGAVPSKTLLYESYLYRLLQQ--------Q 80
Cdd:PLN02507  26 FDLFVIGAGSGGVRAARFSANFGAKVGICelpfhpissESIGGVGGTCVIRGCVPKKILVYGATFGGEFEDaknygweiN 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    81 ELIEQRGTRLFPAKFDmqaaqsalkhNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPFIVEAKYIVVAT 160
Cdd:PLN02507 106 EKVDFNWKKLLQKKTD----------EILRLNGIYKRLLANAGVKLYEGEGKIVGPNEVEVTQLDGTKLRYTAKHILIAT 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   161 GSAVIQ--CPGvaidNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATK 238
Cdd:PLN02507 176 GSRAQRpnIPG----KELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRAVVA 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   239 TLLQCQGIAFLLDTrvqlaeadaagqlNITLLNKVSK--KTYVHH-----CDVLMVSIGRRPLLKGLDISSIGLdERDFV 311
Cdd:PLN02507 252 RNLEGRGINLHPRT-------------NLTQLTKTEGgiKVITDHgeefvADVVLFATGRAPNTKRLNLEAVGV-ELDKA 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   312 ENVDVQTQSLLKYPHIKPIGDVT----LGPMLALKAEEQAIRAIqsigcTGSDGTSNCGFPPNVLYCQPQIGWVGYTEE- 386
Cdd:PLN02507 318 GAVKVDEYSRTNIPSIWAIGDVTnrinLTPVALMEGTCFAKTVF-----GGQPTKPDYENVACAVFCIPPLSVVGLSEEe 392
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   387 GLAKAripyqKGRVLF---SQNVRYNTLLPREENTtvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAH 463
Cdd:PLN02507 393 AVEQA-----KGDILVftsSFNPMKNTISGRQEKT----VMKLIVDAETDKVLGASMCGPDAPEIMQGIAVALKCGATKA 463
                        490
                 ....*....|....*.
gi 6325240   464 DVCKVPFPHPSLSESF 479
Cdd:PLN02507 464 QFDSTVGIHPSAAEEF 479
PRK07251 PRK07251
FAD-containing oxidoreductase;
18-479 4.59e-40

FAD-containing oxidoreductase;


Pssm-ID: 180907 [Multi-domain]  Cd Length: 438  Bit Score: 149.90  E-value: 4.59e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASL-GGAYLVDGAVPSKTLLYESYlyRLLQQQELIEQRGT---RLFPA 93
Cdd:PRK07251   4 YDLIVIGFGKAGKTLAAKLASAGKKVALVEESKAMyGGTCINIGCIPTKTLLVAAE--KNLSFEQVMATKNTvtsRLRGK 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    94 KFDMqaaqsalkhnieelgnvykreLSKNNVTVYKGTAAFKDPHHVEIaQRGMKPFIVEAKYIVVATG--SAVIQCPGVA 171
Cdd:PRK07251  82 NYAM---------------------LAGSGVDLYDAEAHFVSNKVIEV-QAGDEKIELTAETIVINTGavSNVLPIPGLA 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   172 iDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLD 251
Cdd:PRK07251 140 -DSKHVYDSTGIQSLETLPERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTILPREEPSVAALAKQYMEEDGITFLLN 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   252 TRVQLAEADaAGQLNITllnkVSKKTYVHhcDVLMVSIGRRPLLK--GLDISSIGLDERDFVEnVDVQTQSLLkyPHIKP 329
Cdd:PRK07251 219 AHTTEVKND-GDQVLVV----TEDETYRF--DALLYATGRKPNTEplGLENTDIELTERGAIK-VDDYCQTSV--PGVFA 288
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   330 IGDVTLGPMLALKAEEQAIRAIQSIGCTGSDGTSNCGFPPNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQnvryn 409
Cdd:PRK07251 289 VGDVNGGPQFTYISLDDFRIVFGYLTGDGSYTLEDRGNVPTTMFITPPLSQVGLTEKEAKEAGLPYAVKELLVAA----- 363
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6325240   410 tlLPREE-NTTVSPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESF 479
Cdd:PRK07251 364 --MPRAHvNNDLRGAFKVVVNTETKEILGATLFGEGSQEIINLITMAMDNKIPYTYFKKQIFTHPTMAENL 432
PLN02546 PLN02546
glutathione reductase
18-479 6.13e-40

glutathione reductase


Pssm-ID: 215301 [Multi-domain]  Cd Length: 558  Bit Score: 151.95  E-value: 6.13e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAG---------LLTACVDQRASLGGAYLVDGAVPSKTLLYESYLyrllqQQELIEQRGt 88
Cdd:PLN02546  80 FDLFTIGAGSGGVRASRFASNFGasaavcelpFATISSDTLGGVGGTCVLRGCVPKKLLVYASKY-----SHEFEESRG- 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    89 rlFPAKFDMQAAQ--SALKHN----IEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRgmkpfIVEAKYIVVATGS 162
Cdd:PLN02546 154 --FGWKYETEPKHdwNTLIANknaeLQRLTGIYKNILKNAGVTLIEGRGKIVDPHTVDVDGK-----LYTARNILIAVGG 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   163 --AVIQCPGVaidnDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTL 240
Cdd:PLN02546 227 rpFIPDIPGI----EHAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQKKVLRGFDEEVRDFVAEQ 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   241 LQCQGIAFLLDTRVQLAEADAAGQLNItllnKVSKKT---YVHhcdvLMVSIGRRPLLKGLDISSIG--LDERDFVEnVD 315
Cdd:PLN02546 303 MSLRGIEFHTEESPQAIIKSADGSLSL----KTNKGTvegFSH----VMFATGRKPNTKNLGLEEVGvkMDKNGAIE-VD 373
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   316 VQTQSllKYPHIKPIGDVT----LGPMLALKAEEQAiRAIQSIGCTGSDGTSncgfPPNVLYCQPQIGWVGYTEEGLAKa 391
Cdd:PLN02546 374 EYSRT--SVPSIWAVGDVTdrinLTPVALMEGGALA-KTLFGNEPTKPDYRA----VPSAVFSQPPIGQVGLTEEQAIE- 445
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   392 ripyQKGRV-LFSQNVRyntllPREENTTVSP---FIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCK 467
Cdd:PLN02546 446 ----EYGDVdVFTANFR-----PLKATLSGLPdrvFMKLIVCAKTNKVLGVHMCGEDAPEIIQGFAVAVKAGLTKADFDA 516
                        490
                 ....*....|..
gi 6325240   468 VPFPHPSLSESF 479
Cdd:PLN02546 517 TVGIHPTAAEEF 528
PRK08010 PRK08010
pyridine nucleotide-disulfide oxidoreductase; Provisional
18-485 1.00e-34

pyridine nucleotide-disulfide oxidoreductase; Provisional


Pssm-ID: 181196 [Multi-domain]  Cd Length: 441  Bit Score: 135.14  E-value: 1.00e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASL-GGAYLVDGAVPSKTLLYESylyrllqqqelieQRGTRLFPAKFD 96
Cdd:PRK08010   4 YQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMyGGTCINIGCIPTKTLVHDA-------------QQHTDFVRAIQR 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    97 MQAAQSALK----HNIEELgnvykrelskNNVTVYKGTAAFKDPHHVEIAQ-------RGMKPFIVEAKYIVVATGSAVI 165
Cdd:PRK08010  71 KNEVVNFLRnknfHNLADM----------PNIDVIDGQAEFINNHSLRVHRpegnleiHGEKIFINTGAQTVVPPIPGIT 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   166 QCPGVaidndkiISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQG 245
Cdd:PRK08010 141 TTPGV-------YDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQG 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   246 IAFLLDTRVQlAEADAAGQLnitllnKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIGL--DERDFVEnVDVQTQSLLK 323
Cdd:PRK08010 214 VDIILNAHVE-RISHHENQV------QVHSEHAQLAVDALLIASGRQPATASLHPENAGIavNERGAIV-VDKYLHTTAD 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   324 ypHIKPIGDVTLGPMLA-LKAEEQAIRAIQSIGcTGSDGTSNCGFPPNVLYCQPQIGWVGYTEEglaKARIPyqkgrvlf 402
Cdd:PRK08010 286 --NIWAMGDVTGGLQFTyISLDDYRIVRDELLG-EGKRSTDDRKNVPYSVFMTPPLSRVGMTEE---QARES-------- 351
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   403 SQNVRYNTL----LPREE--NTTVSpFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLS 476
Cdd:PRK08010 352 GADIQVVTLpvaaIPRARvmNDTRG-VLKAIVDNKTQRILGASLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMS 430

                 ....*....
gi 6325240   477 ESFKQAVQL 485
Cdd:PRK08010 431 ESLNDLFSL 439
PRK13748 PRK13748
putative mercuric reductase; Provisional
20-484 1.56e-32

putative mercuric reductase; Provisional


Pssm-ID: 184298 [Multi-domain]  Cd Length: 561  Bit Score: 130.66  E-value: 1.56e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    20 VLVIGCGPGGFTAAMQASQAGLLTACVdQRASLGGAYLVDGAVPSKTLLYESYLYRLlqQQELIEQRGTRLFPAKFD--- 96
Cdd:PRK13748 101 VAVIGSGGAAMAAALKAVEQGARVTLI-ERGTIGGTCVNVGCVPSKIMIRAAHIAHL--RRESPFDGGIAATVPTIDrsr 177
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    97 MQAAQSALkhnIEELGNV-YKRELSKN-NVTVYKGTAAFKDPHHVEIAQRGMKPFIVEAKYIVVATGS--AVIQCPGVAi 172
Cdd:PRK13748 178 LLAQQQAR---VDELRHAkYEGILDGNpAITVLHGEARFKDDQTLIVRLNDGGERVVAFDRCLIATGAspAVPPIPGLK- 253
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   173 dNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVeSQSEICQNMDNELASATKTLLQCQGIAFLLDT 252
Cdd:PRK13748 254 -ETPYWTSTEALVSDTIPERLAVIGSSVVALELAQAFARLGSKVTIL-ARSTLFFREDPAIGEAVTAAFRAEGIEVLEHT 331
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   253 RV-QLAEAD-------AAGQLnitllnkvskktyvhHCDVLMVSIGRRPLLKGLDISSIG--LDERDFVEnVDVQTQSll 322
Cdd:PRK13748 332 QAsQVAHVDgefvlttGHGEL---------------RADKLLVATGRAPNTRSLALDAAGvtVNAQGAIV-IDQGMRT-- 393
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   323 KYPHIKPIGDVTLGPMLALKAEEQAIRAiqSIGCTGSDGTSNCGFPPNVLYCQPQIGWVGYTEeglAKARipyQKG---- 398
Cdd:PRK13748 394 SVPHIYAAGDCTDQPQFVYVAAAAGTRA--AINMTGGDAALDLTAMPAVVFTDPQVATVGYSE---AEAH---HDGietd 465
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   399 -RVLFSQNVryntllPRE-ENTTVSPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLS 476
Cdd:PRK13748 466 sRTLTLDNV------PRAlANFDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMV 539

                 ....*...
gi 6325240   477 ESFKQAVQ 484
Cdd:PRK13748 540 EGLKLAAQ 547
TGR TIGR01438
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ...
18-479 3.60e-32

thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.


Pssm-ID: 273624 [Multi-domain]  Cd Length: 484  Bit Score: 128.82  E-value: 3.60e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQASQAGLLTACVD--------QRASLGGAYLVDGAVPSKTLLYESYLYRLLQQQELIEQRGTR 89
Cdd:TIGR01438   3 YDLIVIGGGSGGLAAAKEAAAYGAKVMLLDfvtptplgTRWGIGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEE 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     90 LFpaKFDMQAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPFIVEAKYIVVATGSAViQCPG 169
Cdd:TIGR01438  83 TV--KHDWKRLVEAVQNHIGSLNWGYRVALREKKVKYENAYAEFVDKHRIKATNKKGKEKIYSAERFLIATGERP-RYPG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    170 VAIDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTiVESQSEICQNMDNELASATKTLLQCQGIAF- 248
Cdd:TIGR01438 160 IPGAKELCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVT-VMVRSILLRGFDQDCANKVGEHMEEHGVKFk 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    249 --LLDTRVQLAEADAAGQLNitllnkVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIGLDERDFVENVDVQTQSLLKYPH 326
Cdd:TIGR01438 239 rqFVPIKVEQIEAKVLVEFT------DSTNGIEEEYDTVLLAIGRDACTRKLNLENVGVKINKKTGKIPADEEEQTNVPY 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    327 IKPIGDVT-----LGPmLALKAEEQAIRAIQSigctGSDGTSNCGFPPNVLYCQPQIGWVGYTEEglaKARIPYQKG--R 399
Cdd:TIGR01438 313 IYAVGDILedkpeLTP-VAIQAGRLLAQRLFK----GSTVICDYENVPTTVFTPLEYGACGLSEE---KAVEKFGEEnvE 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    400 VLFSQNVRYNTLLPREENTTVSPFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESF 479
Cdd:TIGR01438 385 VFHSYFWPLEWTIPSRDNHNKCYAKLVCNKKENERVVGFHVVGPNAGEVTQGFAAALRCGLTKKDLDNTIGIHPVCAEVF 464
PRK07846 PRK07846
mycothione reductase; Reviewed
117-477 3.78e-32

mycothione reductase; Reviewed


Pssm-ID: 181142 [Multi-domain]  Cd Length: 451  Bit Score: 128.15  E-value: 3.78e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   117 RELSKNNVTVYKGTAAFKDPHHVEIAQRGmkpfIVEAKYIVVATGS-AVIqcPGVAIDND-KIISSDKALSLDYIPSRFT 194
Cdd:PRK07846  97 RGRDTPNIDVYRGHARFIGPKTLRTGDGE----EITADQVVIAAGSrPVI--PPVIADSGvRYHTSDTIMRLPELPESLV 170
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   195 IMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELaSATKTLLQCQGIAFLLDTRVQLAEADaAGQLNITLLNkvs 274
Cdd:PRK07846 171 IVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLRHLDDDI-SERFTELASKRWDVRLGRNVVGVSQD-GSGVTLRLDD--- 245
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   275 kkTYVHHCDVLMVSIGRRPLLKGLDISSIGLDERD--FVENVDVQTQSLlkyPHIKPIGDVTLGPMLALKAEEQAiRAIQ 352
Cdd:PRK07846 246 --GSTVEADVLLVATGRVPNGDLLDAAAAGVDVDEdgRVVVDEYQRTSA---EGVFALGDVSSPYQLKHVANHEA-RVVQ 319
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   353 SIGCTGSD-GTSNCGFPPNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSqNVRYNTLLpreENTTvsPFIKVLIDSR 431
Cdd:PRK07846 320 HNLLHPDDlIASDHRFVPAAVFTHPQIASVGLTENEARAAGLDITVKVQNYG-DVAYGWAM---EDTT--GFVKLIADRD 393
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 6325240   432 DMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPF-PHPSLSE 477
Cdd:PRK07846 394 TGRLLGAHIIGPQASTLIQPLIQAMSFGLDAREMARGQYwIHPALPE 440
Pyr_redox_dim pfam02852
Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both ...
369-482 1.16e-30

Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases.


Pssm-ID: 427019 [Multi-domain]  Cd Length: 109  Bit Score: 114.57  E-value: 1.16e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    369 PNVLYCQPQIGWVGYTEEGLAKARIPYQKGRVLFSQNvrYNTLLPREENTtvspFIKVLIDSRDMKILGVHMINDDANEL 448
Cdd:pfam02852   2 PSVVFTDPEIASVGLTEEEAKEKGGEVKVGKFPFAAN--GRALAYGDTDG----FVKLVADRETGKILGAHIVGPNAGEL 75
                          90       100       110
                  ....*....|....*....|....*....|....
gi 6325240    449 LSQASMAVSLGLTAHDVCKVPFPHPSLSESFKQA 482
Cdd:pfam02852  76 IQEAALAIKMGATVEDLANTIHIHPTLSEALVEA 109
PTZ00052 PTZ00052
thioredoxin reductase; Provisional
18-479 1.50e-29

thioredoxin reductase; Provisional


Pssm-ID: 185416 [Multi-domain]  Cd Length: 499  Bit Score: 121.47  E-value: 1.50e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVD--------QRASLGGAYLVDGAVPSKTLLYESYLYRLLQQQEliEQRGTR 89
Cdd:PTZ00052   6 YDLVVIGGGSGGMAAAKEAAAHGKKVALFDyvkpstqgTKWGLGGTCVNVGCVPKKLMHYAANIGSIFHHDS--QMYGWK 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    90 lFPAKFDMQAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPFIVeAKYIVVATGSAVIQCPG 169
Cdd:PTZ00052  84 -TSSSFNWGKLVTTVQNHIRSLNFSYRTGLRSSKVEYINGLAKLKDEHTVSYGDNSQEETIT-AKYILIATGGRPSIPED 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   170 VAIDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTiVESQSEICQNMDNELASATKTLLQCQGIAFL 249
Cdd:PTZ00052 162 VPGAKEYSITSDDIFSLSKDPGKTLIVGASYIGLETAGFLNELGFDVT-VAVRSIPLRGFDRQCSEKVVEYMKEQGTLFL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   250 ldtrvqlaeadaAGQLNITLlNKVSKKT-------YVHHCDVLMVSIGRRPLLKGLDISSIGLDERDfvENVDVQTQSLL 322
Cdd:PTZ00052 241 ------------EGVVPINI-EKMDDKIkvlfsdgTTELFDTVLYATGRKPDIKGLNLNAIGVHVNK--SNKIIAPNDCT 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   323 KYPHIKPIGDVTLG-PML---ALKAEEQAIRAIQSigctGSDGTSNCGFPPNVLYCQPQIGWVGYTEEglaKARIPYQKG 398
Cdd:PTZ00052 306 NIPNIFAVGDVVEGrPELtpvAIKAGILLARRLFK----QSNEFIDYTFIPTTIFTPIEYGACGYSSE---AAIAKYGED 378
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   399 RV---LFSQNV-------RYNTLLPREE--NTTVSP--FIK-VLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAH 463
Cdd:PTZ00052 379 DIeeyLQEFNTleiaavhREKHERARKDeyDFDVSSncLAKlVCVKSEDNKVVGFHFVGPNAGEITQGFSLALKLGAKKS 458
                        490
                 ....*....|....*.
gi 6325240   464 DVCKVPFPHPSLSESF 479
Cdd:PTZ00052 459 DFDSMIGIHPTDAEVF 474
trypano_reduc TIGR01423
trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of ...
18-477 2.51e-27

trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.


Pssm-ID: 200098 [Multi-domain]  Cd Length: 486  Bit Score: 114.68  E-value: 2.51e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQ-ASQAGLLTACVDQR--------ASLGGAYLVDGAVPSKTL---------LYESYLYRLLQQ 79
Cdd:TIGR01423   4 FDLVVIGAGSGGLEAGWNaATLYKKRVAVVDVQthhgppfyAALGGTCVNVGCVPKKLMvtgaqymdtLRESAGFGWEFD 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     80 QELIEQRGTRLFPAKfdmQAAQSALKHNIEELGNvykrelSKNNVTVYKGTAAFKDpHHVEIAQRGMKPF-----IVEAK 154
Cdd:TIGR01423  84 RSSVKANWKALIAAK---NKAVLDINKSYEGMFA------DTEGLTFFLGWGALED-KNVVLVRESADPKsavkeRLQAE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    155 YIVVATGS--AVIQCPGVaidnDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNN---LGSRVTIVESQSEICQNM 229
Cdd:TIGR01423 154 HILLATGSwpQMLGIPGI----EHCISSNEAFYLDEPPRRVLTVGGGFISVEFAGIFNAykpRGGKVTLCYRNNMILRGF 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    230 DNELASATKTLLQCQGIAFLLDTRVQLAEADAAGQLNITLlnkVSKKTYvhHCDVLMVSIGRRPLLKGLDISSIGLDERD 309
Cdd:TIGR01423 230 DSTLRKELTKQLRANGINIMTNENPAKVTLNADGSKHVTF---ESGKTL--DVDVVMMAIGRVPRTQTLQLDKVGVELTK 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    310 fVENVDVQTQSLLKYPHIKPIGDVTLGPMLALKAEEQAIRAIQSIGCTGSDGTSNCGFPPNVlYCQPQIGWVGYTEEGLA 389
Cdd:TIGR01423 305 -KGAIQVDEFSRTNVPNIYAIGDVTDRVMLTPVAINEGAAFVDTVFGNKPRKTDHTRVASAV-FSIPPIGTCGLVEEDAA 382
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    390 KAripYQKGRVLFSQnvrYNTLLPREENTTVSPFI-KVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKV 468
Cdd:TIGR01423 383 KK---FEKVAVYESS---FTPLMHNISGSKYKKFVaKIVTNHADGTVLGVHLLGDSSPEIIQAVGICLKLNAKISDFYNT 456

                  ....*....
gi 6325240    469 PFPHPSLSE 477
Cdd:TIGR01423 457 IGVHPTSAE 465
PTZ00058 PTZ00058
glutathione reductase; Provisional
17-479 1.57e-21

glutathione reductase; Provisional


Pssm-ID: 185420 [Multi-domain]  Cd Length: 561  Bit Score: 97.76  E-value: 1.57e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    17 VYDVLVIGCGPGGFTAAMQASQAGLLTACVdQRASLGGAYLVDGAVPSKTLLYESYLYrllqqqELIEQRGTRLFPAKFD 96
Cdd:PTZ00058  48 VYDLIVIGGGSGGMAAARRAARNKAKVALV-EKDYLGGTCVNVGCVPKKIMFNAASIH------DILENSRHYGFDTQFS 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    97 MQAAQSALKHN--IEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPF------------------------I 150
Cdd:PTZ00058 121 FNLPLLVERRDkyIRRLNDIYRQNLKKDNVEYFEGKGSLLSENQVLIKKVSQVDGeadesdddevtivsagvsqlddgqV 200
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   151 VEAKYIVVATGSAVIqCPGVAiDNDKIISSDKALSLDYiPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMD 230
Cdd:PTZ00058 201 IEGKNILIAVGNKPI-FPDVK-GKEFTISSDDFFKIKE-AKRIGIAGSGYIAVELINVVNRLGAESYIFARGNRLLRKFD 277
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   231 NELASATKTLLQCQGIAFLLDTRVQLAEADAagQLNITLLnkVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIG-LDERD 309
Cdd:PTZ00058 278 ETIINELENDMKKNNINIITHANVEEIEKVK--EKNLTIY--LSDGRKYEHFDYVIYCVGRSPNTEDLNLKALNiKTPKG 353
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   310 FVENVDVQTQSLlkyPHIKPIGD---------VTLGPMLALKAEEQAIRAIQSI-----------------GCTGSD--- 360
Cdd:PTZ00058 354 YIKVDDNQRTSV---KHIYAVGDccmvkknqeIEDLNLLKLYNEEPYLKKKENTsgesyynvqltpvainaGRLLADrlf 430
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   361 ----GTSNCGFPPNVLYCQPQIGWVGYTEeglAKARIPYQKGRVLFSQNvRYNTLL-------PREENTTvspFIKVLID 429
Cdd:PTZ00058 431 gpfsRTTNYKLIPSVIFSHPPIGTIGLSE---QEAIDIYGKENVKIYES-RFTNLFfsvydmdPAQKEKT---YLKLVCV 503
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|
gi 6325240   430 SRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFPHPSLSESF 479
Cdd:PTZ00058 504 GKEELIKGLHIVGLNADEILQGFAVALKMNATKADFDETIPIHPTAAEEF 553
PRK07845 PRK07845
flavoprotein disulfide reductase; Reviewed
20-482 1.12e-17

flavoprotein disulfide reductase; Reviewed


Pssm-ID: 236112 [Multi-domain]  Cd Length: 466  Bit Score: 85.30  E-value: 1.12e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    20 VLVIGCGPGGFTAAMQASQAGLLTACVDqRASLGGAYLVDGAVPSKTLLYESYLYRLLQQQELIEQRGTRLFPAKFDMQA 99
Cdd:PRK07845   4 IVIIGGGPGGYEAALVAAQLGADVTVIE-RDGLGGAAVLTDCVPSKTLIATAEVRTELRRAAELGIRFIDDGEARVDLPA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   100 ----------AQSAlkhNIeelgnvyKRELSKNNVTVYKGTAAFKD----PHHVEIAQRGMKPFIVEAKYIVVATGSAVI 165
Cdd:PRK07845  83 vnarvkalaaAQSA---DI-------RARLEREGVRVIAGRGRLIDpglgPHRVKVTTADGGEETLDADVVLIATGASPR 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   166 QCPGVAIDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQG 245
Cdd:PRK07845 153 ILPTAEPDGERILTWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGVKVTLVSSRDRVLPGEDADAAEVLEEVFARRG 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   246 IAFLLDTRVQLAEADAAGQLnITLlnkvSKKTYVH--HCdvLMvSIGRRPLLKGLDISSIG--LDERDFVEnVD-VQTQS 320
Cdd:PRK07845 233 MTVLKRSRAESVERTGDGVV-VTL----TDGRTVEgsHA--LM-AVGSVPNTAGLGLEEAGveLTPSGHIT-VDrVSRTS 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   321 LlkyPHIKPIGDVTLGPMLALKAEEQA-IRAIQSIGctgsDGTSncgfpP--------NVlYCQPQIGWVGYTEEGLAKA 391
Cdd:PRK07845 304 V---PGIYAAGDCTGVLPLASVAAMQGrIAMYHALG----EAVS-----PlrlktvasNV-FTRPEIATVGVSQAAIDSG 370
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   392 RIPYQKGRVLFSQNVRYNTLLPREEnttvspFIKVLIDSRDMKILGVHMINDDANELLSQASMAVSLGLTAHDVCKVPFP 471
Cdd:PRK07845 371 EVPARTVMLPLATNPRAKMSGLRDG------FVKLFCRPGTGVVIGGVVVAPRASELILPIALAVQNRLTVDDLAQTFTV 444
                        490
                 ....*....|.
gi 6325240   472 HPSLSESFKQA 482
Cdd:PRK07845 445 YPSLSGSITEA 455
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
192-265 3.69e-17

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 76.09  E-value: 3.69e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6325240    192 RFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQLAEADAAGQL 265
Cdd:pfam00070   1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRLLPGFDPEIAKILQEKLEKNGIEFLLNTTVEAIEGNGDGVV 74
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
155-334 7.10e-15

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 75.62  E-value: 7.10e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  155 YIVVATGSAVI--QCPGVAIDN----------DKIissdKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQ 222
Cdd:COG0446  81 KLVLATGARPRppPIPGLDLPGvftlrtlddaDAL----REALKEFKGKRAVVIGGGPIGLELAEALRKRGLKVTLVERA 156
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  223 SEICQNMDNELASATKTLLQCQGIAFLLDTRVQlaEADAAGQLNITLlnkVSKKTYvhHCDVLMVSIGRRP---LLKGLD 299
Cdd:COG0446 157 PRLLGVLDPEMAALLEEELREHGVELRLGETVV--AIDGDDKVAVTL---TDGEEI--PADLVVVAPGVRPnteLAKDAG 229
                       170       180       190
                ....*....|....*....|....*....|....*
gi 6325240  300 ISsigLDERDFVEnVDVQTQSllKYPHIKPIGDVT 334
Cdd:COG0446 230 LA---LGERGWIK-VDETLQT--SDPDVYAAGDCA 258
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
18-354 1.51e-12

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 68.22  E-value: 1.51e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDqRASLGGAYlvdgavpskTLLYESYLY----RLLQQQELIEQrgtrlfpa 93
Cdd:COG0492   1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIE-GGEPGGQL---------ATTKEIENYpgfpEGISGPELAER-------- 62
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   94 kfdMQAaQsALKHNIE-ELGNVykrelsknnVTVYKGtaafKDPHHVEIAQRGmkpfIVEAKYIVVATGSAV--IQCPGV 170
Cdd:COG0492  63 ---LRE-Q-AERFGAEiLLEEV---------TSVDKD----DGPFRVTTDDGT----EYEAKAVIIATGAGPrkLGLPGE 120
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  171 AIDNDKIISS----------DKalsldyipsRFTIMGGGTIGLEIACIFNNLGSRVTIVesqseicqNMDNELAsATKTL 240
Cdd:COG0492 121 EEFEGRGVSYcatcdgfffrGK---------DVVVVGGGDSALEEALYLTKFASKVTLI--------HRRDELR-ASKIL 182
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  241 LQC----QGIAFLLDTRVqlAEADAAGQLN-ITLLNKVSKKTYVHHCDVLMVSIGRRPLLKGLDISSIGLDERDFVEnVD 315
Cdd:COG0492 183 VERlranPKIEVLWNTEV--TEIEGDGRVEgVTLKNVKTGEEKELEVDGVFVAIGLKPNTELLKGLGLELDEDGYIV-VD 259
                       330       340       350       360
                ....*....|....*....|....*....|....*....|
gi 6325240  316 VQTQSllKYPHIKPIGDVTLGPM-LALKAEEQAIRAIQSI 354
Cdd:COG0492 260 EDMET--SVPGVFAAGDVRDYKYrQAATAAGEGAIAALSA 297
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
19-161 2.51e-09

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 59.16  E-value: 2.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     19 DVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGG------------AYLVDGAVPSKtlLYESYLYRLLQQQELIEQR 86
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGGmltsglvgpdmgFYLNKEQVVGG--IAREFRQRLRARGGLPGPY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     87 GTRLFPAKFDMQAAQSALkhniEELgnvykreLSKNNVTVYKGTAAF---KDPHHVE--IAQRGMKPFIVEAKYIVVATG 161
Cdd:pfam12831  79 GLRGGWVPFDPEVAKAVL----DEM-------LAEAGVTVLLHTRVVgvvKEGGRITgvTVETKGGRITIRAKVFIDATG 147
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
121-300 1.15e-08

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 57.07  E-value: 1.15e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  121 KNNVTVYKGTAAFK-DP--HHVEIAQRGmkpfIVEAKYIVVATGSA--VIQCPGVAIDN----------DKIISSDKAls 185
Cdd:COG1251  68 ENGIDLRLGTRVTAiDRaaRTVTLADGE----TLPYDKLVLATGSRprVPPIPGADLPGvftlrtlddaDALRAALAP-- 141
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  186 ldyiPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQN-MDNELASATKTLLQCQGIAFLLDTRVQLAEADAAGq 264
Cdd:COG1251 142 ----GKRVVVIGGGLIGLEAAAALRKRGLEVTVVERAPRLLPRqLDEEAGALLQRLLEALGVEVRLGTGVTEIEGDDRV- 216
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 6325240  265 LNITLlnkvsKKTYVHHCDVLMVSIGRRP---LLK--GLDI 300
Cdd:COG1251 217 TGVRL-----ADGEELPADLVVVAIGVRPnteLARaaGLAV 252
PRK04965 PRK04965
NADH:flavorubredoxin reductase NorW;
192-332 7.39e-08

NADH:flavorubredoxin reductase NorW;


Pssm-ID: 179902 [Multi-domain]  Cd Length: 377  Bit Score: 54.54  E-value: 7.39e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   192 RFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQN-MDNELASATKTLLQCQGIAFLLDTRVQLAEADAAGqLNITLl 270
Cdd:PRK04965 143 RVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASlMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSG-IRATL- 220
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6325240   271 nkVSKKTYvhHCDVLMVSIGRRPLLK-----GLDIssigldERDFVENVDVQTQSllkyPHIKPIGD 332
Cdd:PRK04965 221 --DSGRSI--EVDAVIAAAGLRPNTAlarraGLAV------NRGIVVDSYLQTSA----PDIYALGD 273
HI0933_like pfam03486
HI0933-like protein;
18-163 1.39e-06

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 50.66  E-value: 1.39e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGAYLVDG---------AVPSKTLL---------YESYLYRLLQQ 79
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGggrcnvtnlSEEPDNFLsrypgnpkfLKSALSRFTPW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     80 Q----------ELIEQRGTRLFPAkfDMQAaqsalkhniEELGNVYKRELSKNNVTVYKGTAAfkdphhVEIAQRGMKPF 149
Cdd:pfam03486  81 DfiaffeslgvPLKEEDHGRLFPD--SDKA---------SDIVDALLNELKELGVKIRLRTRV------LSVEKDDDGRF 143
                         170       180
                  ....*....|....*....|.
gi 6325240    150 IV-------EAKYIVVATGSA 163
Cdd:pfam03486 144 RVktggeelEADSLVLATGGL 164
PRK12835 PRK12835
3-ketosteroid-delta-1-dehydrogenase; Reviewed
9-60 1.67e-06

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 237221 [Multi-domain]  Cd Length: 584  Bit Score: 50.58  E-value: 1.67e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 6325240     9 STMEDFAAVYDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGAYLVDG 60
Cdd:PRK12835   3 VDEQNFDREVDVLVVGSGGGGMTAALTAAARGLDTLVVEKSAHFGGSTALSG 54
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
192-333 4.36e-05

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 45.89  E-value: 4.36e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240  192 RFTIMGGGTIGLEIACI----------FNNLGS---RVTIVESQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQLAE 258
Cdd:COG1252 151 TIVVVGGGPTGVELAGElaellrkllrYPGIDPdkvRITLVEAGPRILPGLGEKLSEAAEKELEKRGVEVHTGTRVTEVD 230
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6325240  259 ADAAgqlnitllnkVSKKTYVHHCDVLMVSIGRR--PLLKGLDISsigLDERDFVEnVDvQTQSLLKYPHIKPIGDV 333
Cdd:COG1252 231 ADGV----------TLEDGEEIPADTVIWAAGVKapPLLADLGLP---TDRRGRVL-VD-PTLQVPGHPNVFAIGDC 292
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
18-54 6.08e-05

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 45.21  E-value: 6.08e-05
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 6325240   18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGG 54
Cdd:COG1053   4 YDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
19-55 9.43e-05

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 44.59  E-value: 9.43e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 6325240     19 DVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGA 55
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGA 37
PLN02463 PLN02463
lycopene beta cyclase
17-47 1.09e-04

lycopene beta cyclase


Pssm-ID: 178082 [Multi-domain]  Cd Length: 447  Bit Score: 44.70  E-value: 1.09e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 6325240    17 VYDVLVIGCGPGGFTAAMQASQAGLLTACVD 47
Cdd:PLN02463  28 VVDLVVVGGGPAGLAVAQQVSEAGLSVCCID 58
nitri_red_nirB TIGR02374
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ...
106-333 2.64e-04

nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]


Pssm-ID: 162827 [Multi-domain]  Cd Length: 785  Bit Score: 43.66  E-value: 2.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    106 HNIEELGNVYKRELSKNNVTVYKGTAAFKdphhveiAQRGMKPFIVEAKYI------VVATGSA--VIQCPGvaidNDK- 176
Cdd:TIGR02374  51 ADLDDITLNSKDWYEKHGITLYTGETVIQ-------IDTDQKQVITDAGRTlsydklILATGSYpfILPIPG----ADKk 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    177 -------IISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASAT-KTLLQCQGIAF 248
Cdd:TIGR02374 120 gvyvfrtIEDLDAIMAMAQRFKKAAVIGGGLLGLEAAVGLQNLGMDVSVIHHAPGLMAKQLDQTAGRLlQRELEQKGLTF 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240    249 LLDTR-VQLAEADAAGQLNItllnkvsKKTYVHHCDVLMVSIGRRPLLK-----GLDISsigldeRDFVENVDVQTQSll 322
Cdd:TIGR02374 200 LLEKDtVEIVGATKADRIRF-------KDGSSLEADLIVMAAGIRPNDElavsaGIKVN------RGIIVNDSMQTSD-- 264
                         250
                  ....*....|.
gi 6325240    323 kyPHIKPIGDV 333
Cdd:TIGR02374 265 --PDIYAVGEC 273
PRK12839 PRK12839
FAD-dependent oxidoreductase;
15-55 2.92e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237223 [Multi-domain]  Cd Length: 572  Bit Score: 43.28  E-value: 2.92e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 6325240    15 AAVYDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGA 55
Cdd:PRK12839   6 THTYDVVVVGSGAGGLSAAVAAAYGGAKVLVVEKASTCGGA 46
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
16-186 5.66e-04

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 41.69  E-value: 5.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     16 AVYDVLVIGCGPGGFTAAMQ-ASQAGLLTACVDQRASLGGAYLVDGAVPSKTLLYEsylyrllQQQELIEQRGTRLFPak 94
Cdd:pfam01946  16 AESDVVIVGAGSSGLTAAYYlAKNRGLKVAIIERSVSPGGGAWLGGQLFSAMVVRK-------PAHLFLDEFGIPYED-- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     95 fdmQAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAA----FKDPHH----------VEIAQRGMKPFIVEAKYIVVAT 160
Cdd:pfam01946  87 ---EGDYVVVKHAALFTSTLMSKALQLPNVKLFNATSVedliVRPGVGvagvvtnwtlVEQAGLHMDPNTIRAKVVVSAT 163
                         170       180
                  ....*....|....*....|....*.
gi 6325240    161 GSaviQCPGVAIDNDKIISSDKALSL 186
Cdd:pfam01946 164 GH---DGPFGAFCVKRIKLIQQIQKV 186
PRK13512 PRK13512
coenzyme A disulfide reductase; Provisional
173-333 5.79e-04

coenzyme A disulfide reductase; Provisional


Pssm-ID: 184103 [Multi-domain]  Cd Length: 438  Bit Score: 42.46  E-value: 5.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   173 DNDKI---ISSDKAlsldyipSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELASATKTLLQCQGIAFL 249
Cdd:PRK13512 135 DTDAIdqfIKANQV-------DKALVVGAGYISLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYR 207
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   250 LDTrvqlaEADAAGQLNITLlnkvsKKTYVHHCDVLMVSIGRRPLLKGLDISSIGLDERDFVE-NVDVQTQsllkYPHIK 328
Cdd:PRK13512 208 LNE-----EIDAINGNEVTF-----KSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDDKGFIPvNDKFETN----VPNIY 273

                 ....*
gi 6325240   329 PIGDV 333
Cdd:PRK13512 274 AIGDI 278
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
18-161 6.81e-04

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 42.16  E-value: 6.81e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGA-----YlvDGA---VPSKTLLYESYLYrllqqqelieQRGTR 89
Cdd:COG2072   7 VDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTwrdnrY--PGLrldTPSHLYSLPFFPN----------WSDDP 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   90 LFPAKFDMQ------AAQSALKHNIEElgnvykrelsknNVTVykgTAAFKDPH----HVEiAQRGMKpfiVEAKYIVVA 159
Cdd:COG2072  75 DFPTGDEILayleayADKFGLRRPIRF------------GTEV---TSARWDEAdgrwTVT-TDDGET---LTARFVVVA 135

                ..
gi 6325240  160 TG 161
Cdd:COG2072 136 TG 137
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
19-161 7.74e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 42.15  E-value: 7.74e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   19 DVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGaylvdgavpsktllyesYLYRLlqqqelieqrgTRLFPakfDMQ 98
Cdd:COG1148 142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGG-----------------RAAQL-----------HKTFP---GLD 190
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6325240   99 AAQSALKHNIEElgnVYKRElsknNVTVYKGT---------AAFKdphhVEIAQRGMKPFIVEAKYIVVATG 161
Cdd:COG1148 191 CPQCILEPLIAE---VEANP----NITVYTGAeveevsgyvGNFT----VTIKKGPREEIEIEVGAIVLATG 251
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
7-50 8.13e-04

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 41.81  E-value: 8.13e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 6325240     7 ILSTMEDFaavyDVLVIGCGPGGFTAAMQASQAGLLTACVDQRA 50
Cdd:PRK07494   1 SLMEKEHT----DIAVIGGGPAGLAAAIALARAGASVALVAPEP 40
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
18-55 9.48e-04

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 41.76  E-value: 9.48e-04
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 6325240   18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGA 55
Cdd:COG1233   4 YDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGR 41
PRK09564 PRK09564
coenzyme A disulfide reductase; Reviewed
191-293 9.50e-04

coenzyme A disulfide reductase; Reviewed


Pssm-ID: 181958 [Multi-domain]  Cd Length: 444  Bit Score: 41.56  E-value: 9.50e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240   191 SRFTIMGGGTIGLEIACIFNNLGSRVTIVE-SQSEICQNMDNELASATKTLLQCQGIAFLLDTRVQLAEADAAGQLNITl 269
Cdd:PRK09564 150 KNIVIIGAGFIGLEAVEAAKHLGKNVRIIQlEDRILPDSFDKEITDVMEEELRENGVELHLNEFVKSLIGEDKVEGVVT- 228
                         90       100
                 ....*....|....*....|....
gi 6325240   270 lnkvSKKTYVhhCDVLMVSIGRRP 293
Cdd:PRK09564 229 ----DKGEYE--ADVVIVATGVKP 246
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
18-162 1.06e-03

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 41.15  E-value: 1.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325240     18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDqRASLGGAYLVDGAVPSKTLLYesylYRLLQQQELIEQRGTRLFPAKFDM 97
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLE-KKSFPRYKPCGGALSPRALEE----LDLPGELIVNLVRGARFFSPNGDS 75
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6325240     98 QAAQSalkhnIEELGNVYKREL---------SKNNVTVYKGTAA----FKDPH-HVEIAQRGMKpfiVEAKYIVVATGS 162
Cdd:TIGR02032  76 VEIPI-----ETELAYVIDRDAfdeqlaeraQEAGAELRLGTRVldveIHDDRvVVIVRGSEGT---VTAKIVIGADGS 146
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
18-54 2.12e-03

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 40.79  E-value: 2.12e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGG 54
Cdd:PRK07843   8 YDVVVVGSGAAGMVAALTAAHRGLSTVVVEKAPHYGG 44
PRK12843 PRK12843
FAD-dependent oxidoreductase;
12-54 3.83e-03

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 39.72  E-value: 3.83e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 6325240    12 EDFAAVYDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGG 54
Cdd:PRK12843  11 ERWDAEFDVIVIGAGAAGMSAALFAAIAGLKVLLVERTEYVGG 53
PRK08294 PRK08294
phenol 2-monooxygenase; Provisional
19-50 3.84e-03

phenol 2-monooxygenase; Provisional


Pssm-ID: 236223 [Multi-domain]  Cd Length: 634  Bit Score: 39.97  E-value: 3.84e-03
                         10        20        30
                 ....*....|....*....|....*....|...
gi 6325240    19 DVLVIGCGPGGFTAAMQASQ-AGLLTACVDQRA 50
Cdd:PRK08294  34 DVLIVGCGPAGLTLAAQLSAfPDITTRIVERKP 66
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
18-62 5.61e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 39.35  E-value: 5.61e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGAYLVDGAV 62
Cdd:PRK12844   7 YDVVVVGSGGGGMCAALAAADSGLEPLIVEKQDKVGGSTAMSGGV 51
PRK09754 PRK09754
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
192-258 5.90e-03

phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional


Pssm-ID: 170080 [Multi-domain]  Cd Length: 396  Bit Score: 39.14  E-value: 5.90e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6325240   192 RFTIMGGGTIGLEIACIFNNLGSRVTIVESQseicqnmDNELASATKTLLQC--------QGIAFLLDTRVQLAE 258
Cdd:PRK09754 146 SVVIVGAGTIGLELAASATQRRCKVTVIELA-------ATVMGRNAPPPVQRyllqrhqqAGVRILLNNAIEHVV 213
sdhA PRK07803
succinate dehydrogenase flavoprotein subunit; Reviewed
18-46 6.04e-03

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 236101 [Multi-domain]  Cd Length: 626  Bit Score: 39.25  E-value: 6.04e-03
                         10        20
                 ....*....|....*....|....*....
gi 6325240    18 YDVLVIGCGPGGFTAAMQASQAGLLTACV 46
Cdd:PRK07803   9 YDVVVIGAGGAGLRAAIEARERGLRVAVV 37
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
11-54 8.45e-03

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 38.62  E-value: 8.45e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*.
gi 6325240   11 MEDFAAvyDVLVIGCGPGGFTAAMQASQAGLLTACVDQ--RASLGG 54
Cdd:COG3573   1 MAAMDA--DVIVVGAGLAGLVAAAELADAGRRVLLLDQepEANLGG 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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