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Conserved domains on  [gi|6325312|ref|NP_015380|]
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exocyst subunit SEC8 [Saccharomyces cerevisiae S288C]

Protein Classification

exocyst complex component SEC8( domain architecture ID 10513222)

exocyst complex component SEC8 is a component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane

Gene Ontology:  GO:0006887|GO:0006893|GO:0015031
TCDB:  1.F.2

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Sec8_exocyst pfam04048
Sec8 exocyst complex component specific domain;
34-174 9.54e-62

Sec8 exocyst complex component specific domain;


:

Pssm-ID: 367782  Cd Length: 141  Bit Score: 206.37  E-value: 9.54e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325312      34 HLQNDLNRINLQWNRILSDNTNPLELALAFLDDTSVGLGHRYEEFNQLKSQIGSHLQDVVNEHSQVFNTNVASYGKAVSS 113
Cdd:pfam04048    1 KLKEVLNRIKYEWPRVLSDDANPVELALSLLDDTSVGLAHRYKEFQQLKSQIETALQEVVNEHHQGFNSSIGSYHQILSS 80
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6325312     114 IMQAQEQTLNLKNCLKEANEKITTDKGSLQELNDNNLKYTKMIDVLVNIEELLQIPEKIEE 174
Cdd:pfam04048   81 IQDSQEDIRQLKQSLEESKKKLGTRSPELQELNQRSQKYKEMIEILDAIEELLSVPDKIEQ 141
 
Name Accession Description Interval E-value
Sec8_exocyst pfam04048
Sec8 exocyst complex component specific domain;
34-174 9.54e-62

Sec8 exocyst complex component specific domain;


Pssm-ID: 367782  Cd Length: 141  Bit Score: 206.37  E-value: 9.54e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325312      34 HLQNDLNRINLQWNRILSDNTNPLELALAFLDDTSVGLGHRYEEFNQLKSQIGSHLQDVVNEHSQVFNTNVASYGKAVSS 113
Cdd:pfam04048    1 KLKEVLNRIKYEWPRVLSDDANPVELALSLLDDTSVGLAHRYKEFQQLKSQIETALQEVVNEHHQGFNSSIGSYHQILSS 80
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6325312     114 IMQAQEQTLNLKNCLKEANEKITTDKGSLQELNDNNLKYTKMIDVLVNIEELLQIPEKIEE 174
Cdd:pfam04048   81 IQDSQEDIRQLKQSLEESKKKLGTRSPELQELNQRSQKYKEMIEILDAIEELLSVPDKIEQ 141
 
Name Accession Description Interval E-value
Sec8_exocyst pfam04048
Sec8 exocyst complex component specific domain;
34-174 9.54e-62

Sec8 exocyst complex component specific domain;


Pssm-ID: 367782  Cd Length: 141  Bit Score: 206.37  E-value: 9.54e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6325312      34 HLQNDLNRINLQWNRILSDNTNPLELALAFLDDTSVGLGHRYEEFNQLKSQIGSHLQDVVNEHSQVFNTNVASYGKAVSS 113
Cdd:pfam04048    1 KLKEVLNRIKYEWPRVLSDDANPVELALSLLDDTSVGLAHRYKEFQQLKSQIETALQEVVNEHHQGFNSSIGSYHQILSS 80
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6325312     114 IMQAQEQTLNLKNCLKEANEKITTDKGSLQELNDNNLKYTKMIDVLVNIEELLQIPEKIEE 174
Cdd:pfam04048   81 IQDSQEDIRQLKQSLEESKKKLGTRSPELQELNQRSQKYKEMIEILDAIEELLSVPDKIEQ 141
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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