|
Name |
Accession |
Description |
Interval |
E-value |
| MCM |
smart00350 |
minichromosome maintenance proteins; |
145-641 |
0e+00 |
|
minichromosome maintenance proteins;
Pssm-ID: 214631 [Multi-domain] Cd Length: 509 Bit Score: 716.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 145 KPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSggRLYLQT 224
Cdd:smart00350 1 KPSSIRELRADHLGKLVRISGIVTRTSGVRPKLKRASFTCEKCGATLGPEIQSGRETEPTVCPPRECQSPTP--FSLNHE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 225 RgSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLrTGFQQMAQGLLSE--TYLEAHW 302
Cdd:smart00350 79 R-STFIDFQKIKLQESPEEVPVGQLPRSVDVILDGDLVDKAKPGDRVEVTGIYRNVP-YGFKLNTVKGLPVfaTYIEANH 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 303 IVKMT---KSDDDVSGAGELSSEELKQIAE----EDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQS-PQGMKIRGN 374
Cdd:smart00350 157 VRKLDykrSFEDSSFSVQSLSDEEEEEIRKlskdPDIYERLARSLAPSIYGHEDIKKAILLLLFGGVHKNlPDGMKIRGD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 375 IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD 454
Cdd:smart00350 237 INILLCGDPGTAKSQLLKYVEKTAPRAVYTTGKGSSAVGLTAAVTRDPETREFTLEAGALVLADNGVCCIDEFDKMDDSD 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 455 RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLA 534
Cdd:smart00350 317 RTAIHEAMEQQTISIAKAGITTTLNARCSVLAAANPIGGRYDPKLTPEENIDLPAPILSRFDLLFVVLDEVDEERDRELA 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 535 QHITYVHQHSR-QPPAQFE-PLDMKLMRRYIAMCHER-QPTVPESLADYITAAYVEMRREARASKDAT--YTSARTLLAI 609
Cdd:smart00350 397 KHVVDLHRYSHpEEDEAFEpPLSQEKLRKYIAYAREKiKPKLSEEAADKLVKAYVDLRKEDSQTESRSsiPITVRQLESI 476
|
490 500 510
....*....|....*....|....*....|..
gi 10242373 610 LRLSTALARLRMVDIVEKEDVNEAIRLMEMSK 641
Cdd:smart00350 477 IRLSEAHAKMRLSDVVEEADVEEAIRLLRESI 508
|
|
| MCM7 |
cd17758 |
DNA replication licensing factor Mcm7; Mcm7 is a helicase that play an important role in ... |
335-640 |
0e+00 |
|
DNA replication licensing factor Mcm7; Mcm7 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350664 [Multi-domain] Cd Length: 306 Bit Score: 605.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGL 414
Cdd:cd17758 1 KLAASIAPEIYGHEDVKKALLLLLVGGVDKRGDGMKIRGDINICLMGDPGVAKSQLLKYICRIAPRSVYTTGRGSSGVGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 415 TAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGR 494
Cdd:cd17758 81 TAAVMKDPVTGEMTLEGGALVLADQGICCIDEFDKMDESDRTAIHEVMEQQTISIAKAGITTTLNARTSILAAANPAYGR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 495 YNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVP 574
Cdd:cd17758 161 YNPRRSPEQNINLPAALLSRFDLLFLILDKPDRDNDLRLAEHVTYVHQHNKQPDSDFEPLDPKLLRAYIALAKRKRPTVP 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 10242373 575 ESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Cdd:cd17758 241 PALADYIVQAYVEMRQEAKRSKDFTFTTPRTLLAILRLSQALARLRLSDSVEIDDVEEALRLMEMS 306
|
|
| Mcm2 |
COG1241 |
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and ... |
10-687 |
0e+00 |
|
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and repair];
Pssm-ID: 440854 [Multi-domain] Cd Length: 682 Bit Score: 543.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 10 KEKVKKFLQEFYYENELGKKQFKYgtqlvhlahREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEyk 89
Cdd:COG1241 6 VDKFEEFLRRYKYRDEILELAQEY---------PEKRSLVVDYNDLYSFDPDLADDLLENPDEVLEAAEEALREIDLE-- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 90 ekeVVNKDVLDVYIehrlmmeqrsRdpgaVRNPQNQYPselmrrfelyfrgpssskprvIREVRADSVGKLLTVRGIVTR 169
Cdd:COG1241 75 ---PYDVSLGDAHV----------R----ITNLPETVP---------------------IRDIRSDHIGKLISVEGIVRK 116
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 170 VSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQtnrsgGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNI 249
Cdd:COG1241 117 ATEVKPKITEAAFECPRCGTETYVPQTGEKLQEPHECPGCGRQ-----GPFKLLPEKSEFIDAQKIRIQEPPEDLPGGQQ 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 250 PRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAqgLLSETYLEAHWIVKMTKSDDDVsgagELSSEELKQIAE 329
Cdd:COG1241 192 PQSIDVILEDDLVGEVRPGDRVTVTGILRIEQRTSGRGKS--TIFDLYLEANSIEVEEKEFEEI----EITEEDEEKIKE 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 330 ----EDFYEKLAASIAPEIYGHEDVKKALLLllvggvdQ--------SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRL 397
Cdd:COG1241 266 lskdPDIYEKIIASIAPSIYGYEEIKEAIAL-------QlfggvpkvLPDGSRIRGDIHILLVGDPGTAKSQLLRYAARL 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 398 APRSQYTTGRGSSGVGLTAAVLRDSVS-GELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILT 476
Cdd:COG1241 339 APRGVYTSGKGSTAAGLTAAAVRDDFGtGRWTLEAGALVLADGGLACIDELDKMREEDRSALHEAMEQQTISIAKAGIVA 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 477 TLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH-------QHSRQPPA 549
Cdd:COG1241 419 TLNARCSVLAAANPKYGRFDPYEPIAEQIDLPPTLLSRFDLIFVLRDKPDEERDRELARHILKVHragelleQEIEEETE 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 550 QFEP-LDMKLMRRYIAMCheRQ---PTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIV 625
Cdd:COG1241 499 EVKPeIDPDLLRKYIAYA--RRnvfPVLTEEAKDLIEDFYVDMRKKGEDEDSPVPITARQLEALIRLAEASARMRLSDTV 576
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 626 EKEDVNEAIRLME--MSKDSLLGEKGQ---------TARTQRpaD---VIFATIRELVSR-GRSVH----FSEAEQRCIS 686
Cdd:COG1241 577 TEEDAERAIRLVDscLKDVGVDPETGKfdidvietgTSKSQR--DkmkLIKDIIKELEEEsSGGAPiedvIEEAEEEGID 654
|
.
gi 10242373 687 R 687
Cdd:COG1241 655 R 655
|
|
| minchrom_main_MCM |
NF040949 |
minichromosome maintenance protein MCM; |
10-687 |
6.87e-177 |
|
minichromosome maintenance protein MCM;
Pssm-ID: 468880 [Multi-domain] Cd Length: 681 Bit Score: 521.41 E-value: 6.87e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 10 KEKVKKFLQEFyyENELGKkqFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELL---- 85
Cdd:NF040949 2 GEKFKEFIRTF--RDSFGN--EKYKERIFEMIAMRKRSLVVDFNDLYMFDPELADLLIEKPDEVLPAASKALKEIVeeed 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 86 PEYKEKEvvnkdvldvyiehrlmmeqrsrdpgavrnpqnqypselmRRFELYFRGPssskPRV--IREVRADSVGKLLTV 163
Cdd:NF040949 78 PEYAEEV---------------------------------------AKFHVRFRNL----PRTvpLRDLRSEYIGKLIAV 114
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 164 RGIVTRVSEVKPRMVVATYTCDQCGAETYQPiQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQ 243
Cdd:NF040949 115 EGIVTRTTPVKPRIVKAVFRCRDCGCEFEWP-EEEEESYEIVEPPTVCPVCGKPGSFRLLQEKSKFIDWQKIVVQERPEE 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 244 VPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSeTYLEAHWIVKMTKSDDDVsgagELSSEE 323
Cdd:NF040949 194 LPPGQLPRSIEVVLEDDLVDTARPGDRVTVTGILRIKPDSSLKKGSRPIFK-NYIEANHIEVSQKELEEV----EITEED 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 324 LKQIAE----EDFYEKLAASIAPEIYGHEDVKKALLLLLVG-GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA 398
Cdd:NF040949 269 EEKILElakdPWIREKIIASIAPSIYGHWEIKEAIALLLFGgVPKVLPDGTRIRGDIHVLIVGDPGTAKSQLLQYVARLA 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 399 PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTL 478
Cdd:NF040949 349 PRAVYTSGKGSTAAGLTAAVVRDKLTGEYYLEAGALVLADGGVAVIDEIDKMREEDRSAIHEAMEQQTVSIAKAGIVATL 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 479 NARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSrqppAQFEP-LDMK 557
Cdd:NF040949 429 NARASVLAAGNPKFGRYDPNRSVAENIDLPPTILSRFDLIFVIRDKPNEERDRRLARHILDVHSGK----EKVKPeIDPD 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 558 LMRRYIAmcHERQ---PTVPESLADYITAAYVEMRREARASKD---ATYTSARTLLAILRLSTALARLRMVDIVEKEDVN 631
Cdd:NF040949 505 LLKKYIA--YARKyvrPKLTEEAKKLIEDFYVEMRKSSKSSEDpdsPIPITARQLEALIRLSEAHAKMRLKDEVTAEDAE 582
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 10242373 632 EAIRLME--MSK------------DSLLGekGQTARTQRPADVIFATIRELVSRGRSVH----FSEAEQRCISR 687
Cdd:NF040949 583 RAIRLMLafLESvgidvetgkidiDTIMT--GKPKSKREKMSKIVEIIKELEEEEECVKikelIKEAEKKGIDE 654
|
|
| MCM |
pfam00493 |
MCM P-loop domain; |
322-541 |
2.32e-132 |
|
MCM P-loop domain;
Pssm-ID: 459830 [Multi-domain] Cd Length: 224 Bit Score: 389.97 E-value: 2.32e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 322 EELKQIA-EEDFYEKLAASIAPEIYGHEDVKKALLLLLVG-GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAP 399
Cdd:pfam00493 3 EEIKELAkRPDIYDKLADSIAPSIYGHEDVKKAILLQLFGgVKKILPDGTRLRGDINVLLVGDPGTAKSQLLKYVEKIAP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 400 RSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLN 479
Cdd:pfam00493 83 RAVYTSGKGSSAAGLTAAVVRDPVTGEFVLEAGALVLADGGVCCIDEFDKMNDEDRVALHEAMEQQTISIAKAGIVATLN 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 10242373 480 ARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH 541
Cdd:pfam00493 163 ARCSILAAANPIFGRYDPKKSIAENINLPPPLLSRFDLIFVLLDKPDEEKDERLAKHIVDLH 224
|
|
| PTZ00111 |
PTZ00111 |
DNA replication licensing factor MCM4; Provisional |
137-671 |
4.22e-82 |
|
DNA replication licensing factor MCM4; Provisional
Pssm-ID: 173403 [Multi-domain] Cd Length: 915 Bit Score: 279.57 E-value: 4.22e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 137 YFRGPSSSKPRVIREVRADSvgkLLTVRGIVTRVSEVKPRMVVATYTC---DQCGAETYQPIQSPTFMPLIMCPSQE--- 210
Cdd:PTZ00111 209 LMNKPVSDCVGNLEPSMADS---LVQFSGTVVRQTWIVPEITMACFRCrgqKKIGLNDYQPCTCEHYEYVIQGEVNEpll 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 211 CQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIP--------------------RSITVVLEGENTRIAQPGDH 270
Cdd:PTZ00111 286 CNECNSKYTFELNHNMCVYSTKKIVKLLQSNSSLNNPDKDgldnsvdnsglngeiymkdnEVINLNLYDDLIDSVKTGDR 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 271 VSVTGIF--LPVlRTGFQQMAQGLLSETYLEA-HwiVKMTKSDDD---------VSGAGELSSEELKQIAE----EDFYE 334
Cdd:PTZ00111 366 VTVVGILkvTPI-RTSTTRRTLKSLYTYFVNViH--VKVINSTNAnqpekglkyLGNENDFSDLQVYKILElsrnPMIYR 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKK----------ALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT 404
Cdd:PTZ00111 443 ILLDSFAPSIKARNNVKIgllcqlfsgnKNSSDFNKSPDACYKVDNFRGIINVLLCGDPGTAKSQLLHYTHLLSPRSIYT 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 405 TGRGSSGVGLTAAV-LRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCS 483
Cdd:PTZ00111 523 SGKSSSSVGLTASIkFNESDNGRAMIQPGAVVLANGGVCCIDELDKCHNESRLSLYEVMEQQTVTIAKAGIVATLKAETA 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 484 ILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI-----------------TY------- 539
Cdd:PTZ00111 603 ILASCNPINSRYNKNKAVIENINISPSLFTRFDLIYLVLDHIDQDTDQLISLSIakdfllphmtgsgndedTYdrsntmh 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 540 VHQHSRQPPAQFEPLDMKLMRRYIAMCHER-QPTVPESLADYITAAYVEMRR------------EARASKD--------- 597
Cdd:PTZ00111 683 VEDESLRSEKDYNKNDLDMLRMYIKFSKLHcFPKLSDEAKKVITREYVKMRQgnfqtsnldeleHAQEDDDddlyyqssg 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 598 --ATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSK-----DSLLGE-------KGQTARTQRPADVIFA 663
Cdd:PTZ00111 763 trMIYVSSRMISSIIRISVSLARMRLSTVVTPADALQAVQIVKSSTfqslvDPTTGKidfdqlhQGITTNKMQQLNQMYE 842
|
....*...
gi 10242373 664 TIRELVSR 671
Cdd:PTZ00111 843 QVLSVLTR 850
|
|
| MCM_N |
pfam14551 |
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins. |
10-103 |
5.66e-16 |
|
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins.
Pssm-ID: 464206 [Multi-domain] Cd Length: 95 Bit Score: 73.87 E-value: 5.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 10 KEKVKKFLQEFYyenELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYK 89
Cdd:pfam14551 1 KRKFKDFLEEFR---EDGDGEFKYRDQLREMIEREQRSLEVDLDDLREFDPDLAEALLENPYEYLPLFEEALKEVVKELS 77
|
90
....*....|....
gi 10242373 90 EKEVVNKDVLDVYI 103
Cdd:pfam14551 78 EDPDYAEEEKEFQV 91
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MCM |
smart00350 |
minichromosome maintenance proteins; |
145-641 |
0e+00 |
|
minichromosome maintenance proteins;
Pssm-ID: 214631 [Multi-domain] Cd Length: 509 Bit Score: 716.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 145 KPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSggRLYLQT 224
Cdd:smart00350 1 KPSSIRELRADHLGKLVRISGIVTRTSGVRPKLKRASFTCEKCGATLGPEIQSGRETEPTVCPPRECQSPTP--FSLNHE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 225 RgSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLrTGFQQMAQGLLSE--TYLEAHW 302
Cdd:smart00350 79 R-STFIDFQKIKLQESPEEVPVGQLPRSVDVILDGDLVDKAKPGDRVEVTGIYRNVP-YGFKLNTVKGLPVfaTYIEANH 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 303 IVKMT---KSDDDVSGAGELSSEELKQIAE----EDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQS-PQGMKIRGN 374
Cdd:smart00350 157 VRKLDykrSFEDSSFSVQSLSDEEEEEIRKlskdPDIYERLARSLAPSIYGHEDIKKAILLLLFGGVHKNlPDGMKIRGD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 375 IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD 454
Cdd:smart00350 237 INILLCGDPGTAKSQLLKYVEKTAPRAVYTTGKGSSAVGLTAAVTRDPETREFTLEAGALVLADNGVCCIDEFDKMDDSD 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 455 RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLA 534
Cdd:smart00350 317 RTAIHEAMEQQTISIAKAGITTTLNARCSVLAAANPIGGRYDPKLTPEENIDLPAPILSRFDLLFVVLDEVDEERDRELA 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 535 QHITYVHQHSR-QPPAQFE-PLDMKLMRRYIAMCHER-QPTVPESLADYITAAYVEMRREARASKDAT--YTSARTLLAI 609
Cdd:smart00350 397 KHVVDLHRYSHpEEDEAFEpPLSQEKLRKYIAYAREKiKPKLSEEAADKLVKAYVDLRKEDSQTESRSsiPITVRQLESI 476
|
490 500 510
....*....|....*....|....*....|..
gi 10242373 610 LRLSTALARLRMVDIVEKEDVNEAIRLMEMSK 641
Cdd:smart00350 477 IRLSEAHAKMRLSDVVEEADVEEAIRLLRESI 508
|
|
| MCM7 |
cd17758 |
DNA replication licensing factor Mcm7; Mcm7 is a helicase that play an important role in ... |
335-640 |
0e+00 |
|
DNA replication licensing factor Mcm7; Mcm7 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350664 [Multi-domain] Cd Length: 306 Bit Score: 605.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGL 414
Cdd:cd17758 1 KLAASIAPEIYGHEDVKKALLLLLVGGVDKRGDGMKIRGDINICLMGDPGVAKSQLLKYICRIAPRSVYTTGRGSSGVGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 415 TAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGR 494
Cdd:cd17758 81 TAAVMKDPVTGEMTLEGGALVLADQGICCIDEFDKMDESDRTAIHEVMEQQTISIAKAGITTTLNARTSILAAANPAYGR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 495 YNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVP 574
Cdd:cd17758 161 YNPRRSPEQNINLPAALLSRFDLLFLILDKPDRDNDLRLAEHVTYVHQHNKQPDSDFEPLDPKLLRAYIALAKRKRPTVP 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 10242373 575 ESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Cdd:cd17758 241 PALADYIVQAYVEMRQEAKRSKDFTFTTPRTLLAILRLSQALARLRLSDSVEIDDVEEALRLMEMS 306
|
|
| Mcm2 |
COG1241 |
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and ... |
10-687 |
0e+00 |
|
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and repair];
Pssm-ID: 440854 [Multi-domain] Cd Length: 682 Bit Score: 543.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 10 KEKVKKFLQEFYYENELGKKQFKYgtqlvhlahREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEyk 89
Cdd:COG1241 6 VDKFEEFLRRYKYRDEILELAQEY---------PEKRSLVVDYNDLYSFDPDLADDLLENPDEVLEAAEEALREIDLE-- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 90 ekeVVNKDVLDVYIehrlmmeqrsRdpgaVRNPQNQYPselmrrfelyfrgpssskprvIREVRADSVGKLLTVRGIVTR 169
Cdd:COG1241 75 ---PYDVSLGDAHV----------R----ITNLPETVP---------------------IRDIRSDHIGKLISVEGIVRK 116
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 170 VSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQtnrsgGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNI 249
Cdd:COG1241 117 ATEVKPKITEAAFECPRCGTETYVPQTGEKLQEPHECPGCGRQ-----GPFKLLPEKSEFIDAQKIRIQEPPEDLPGGQQ 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 250 PRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAqgLLSETYLEAHWIVKMTKSDDDVsgagELSSEELKQIAE 329
Cdd:COG1241 192 PQSIDVILEDDLVGEVRPGDRVTVTGILRIEQRTSGRGKS--TIFDLYLEANSIEVEEKEFEEI----EITEEDEEKIKE 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 330 ----EDFYEKLAASIAPEIYGHEDVKKALLLllvggvdQ--------SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRL 397
Cdd:COG1241 266 lskdPDIYEKIIASIAPSIYGYEEIKEAIAL-------QlfggvpkvLPDGSRIRGDIHILLVGDPGTAKSQLLRYAARL 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 398 APRSQYTTGRGSSGVGLTAAVLRDSVS-GELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILT 476
Cdd:COG1241 339 APRGVYTSGKGSTAAGLTAAAVRDDFGtGRWTLEAGALVLADGGLACIDELDKMREEDRSALHEAMEQQTISIAKAGIVA 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 477 TLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH-------QHSRQPPA 549
Cdd:COG1241 419 TLNARCSVLAAANPKYGRFDPYEPIAEQIDLPPTLLSRFDLIFVLRDKPDEERDRELARHILKVHragelleQEIEEETE 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 550 QFEP-LDMKLMRRYIAMCheRQ---PTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIV 625
Cdd:COG1241 499 EVKPeIDPDLLRKYIAYA--RRnvfPVLTEEAKDLIEDFYVDMRKKGEDEDSPVPITARQLEALIRLAEASARMRLSDTV 576
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 626 EKEDVNEAIRLME--MSKDSLLGEKGQ---------TARTQRpaD---VIFATIRELVSR-GRSVH----FSEAEQRCIS 686
Cdd:COG1241 577 TEEDAERAIRLVDscLKDVGVDPETGKfdidvietgTSKSQR--DkmkLIKDIIKELEEEsSGGAPiedvIEEAEEEGID 654
|
.
gi 10242373 687 R 687
Cdd:COG1241 655 R 655
|
|
| minchrom_main_MCM |
NF040949 |
minichromosome maintenance protein MCM; |
10-687 |
6.87e-177 |
|
minichromosome maintenance protein MCM;
Pssm-ID: 468880 [Multi-domain] Cd Length: 681 Bit Score: 521.41 E-value: 6.87e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 10 KEKVKKFLQEFyyENELGKkqFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELL---- 85
Cdd:NF040949 2 GEKFKEFIRTF--RDSFGN--EKYKERIFEMIAMRKRSLVVDFNDLYMFDPELADLLIEKPDEVLPAASKALKEIVeeed 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 86 PEYKEKEvvnkdvldvyiehrlmmeqrsrdpgavrnpqnqypselmRRFELYFRGPssskPRV--IREVRADSVGKLLTV 163
Cdd:NF040949 78 PEYAEEV---------------------------------------AKFHVRFRNL----PRTvpLRDLRSEYIGKLIAV 114
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 164 RGIVTRVSEVKPRMVVATYTCDQCGAETYQPiQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQ 243
Cdd:NF040949 115 EGIVTRTTPVKPRIVKAVFRCRDCGCEFEWP-EEEEESYEIVEPPTVCPVCGKPGSFRLLQEKSKFIDWQKIVVQERPEE 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 244 VPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSeTYLEAHWIVKMTKSDDDVsgagELSSEE 323
Cdd:NF040949 194 LPPGQLPRSIEVVLEDDLVDTARPGDRVTVTGILRIKPDSSLKKGSRPIFK-NYIEANHIEVSQKELEEV----EITEED 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 324 LKQIAE----EDFYEKLAASIAPEIYGHEDVKKALLLLLVG-GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA 398
Cdd:NF040949 269 EEKILElakdPWIREKIIASIAPSIYGHWEIKEAIALLLFGgVPKVLPDGTRIRGDIHVLIVGDPGTAKSQLLQYVARLA 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 399 PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTL 478
Cdd:NF040949 349 PRAVYTSGKGSTAAGLTAAVVRDKLTGEYYLEAGALVLADGGVAVIDEIDKMREEDRSAIHEAMEQQTVSIAKAGIVATL 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 479 NARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSrqppAQFEP-LDMK 557
Cdd:NF040949 429 NARASVLAAGNPKFGRYDPNRSVAENIDLPPTILSRFDLIFVIRDKPNEERDRRLARHILDVHSGK----EKVKPeIDPD 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 558 LMRRYIAmcHERQ---PTVPESLADYITAAYVEMRREARASKD---ATYTSARTLLAILRLSTALARLRMVDIVEKEDVN 631
Cdd:NF040949 505 LLKKYIA--YARKyvrPKLTEEAKKLIEDFYVEMRKSSKSSEDpdsPIPITARQLEALIRLSEAHAKMRLKDEVTAEDAE 582
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 10242373 632 EAIRLME--MSK------------DSLLGekGQTARTQRPADVIFATIRELVSRGRSVH----FSEAEQRCISR 687
Cdd:NF040949 583 RAIRLMLafLESvgidvetgkidiDTIMT--GKPKSKREKMSKIVEIIKELEEEEECVKikelIKEAEKKGIDE 654
|
|
| MCM |
cd17706 |
MCM helicase family; MCM helicases are a family of helicases that play an important role in ... |
335-640 |
1.54e-135 |
|
MCM helicase family; MCM helicases are a family of helicases that play an important role in replication and homologous recombination repair. The heterohexameric ring-shaped Mcm2-7 complex is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases. Mcm8 and Mcm9, form a complex required for homologous recombination (HR) repair induced by DNA interstrand crosslinks (ICLs).
Pssm-ID: 350658 [Multi-domain] Cd Length: 311 Bit Score: 401.72 E-value: 1.54e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKKALLLLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVG 413
Cdd:cd17706 1 ILADSIAPSIYGHEDVKKAVLLQLFGGVQKIlEDGTRIRGDIHILLVGDPGTAKSQILKYVLKIAPRGVYTSGKGSSGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 414 LTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYG 493
Cdd:cd17706 81 LTAAVVRDSETGEWYLEAGALVLADGGVCCIDEFDKMKELDRTALHEAMEQQTISIAKAGIVTTLNARCSILAAANPKGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 494 RYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHS-----RQPPAQFEPLDMKLMRRYIAMCHE 568
Cdd:cd17706 161 RYNPKLSPIENINLPSPLLSRFDLIFVIRDDPDEERDEELAEHIIDLHRGSdpeeqVKPEEDGIPIDIELLRKYILYARQ 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 10242373 569 RQPTVPESLADYITAAYVEMRREArASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Cdd:cd17706 241 IHPKISEEAREKLVRWYVELRKES-ERRSTIPITARQLESVIRLAEAHAKMRLSEVVTEEDVEEAIRLVRHS 311
|
|
| MCM |
pfam00493 |
MCM P-loop domain; |
322-541 |
2.32e-132 |
|
MCM P-loop domain;
Pssm-ID: 459830 [Multi-domain] Cd Length: 224 Bit Score: 389.97 E-value: 2.32e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 322 EELKQIA-EEDFYEKLAASIAPEIYGHEDVKKALLLLLVG-GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAP 399
Cdd:pfam00493 3 EEIKELAkRPDIYDKLADSIAPSIYGHEDVKKAILLQLFGgVKKILPDGTRLRGDINVLLVGDPGTAKSQLLKYVEKIAP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 400 RSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLN 479
Cdd:pfam00493 83 RAVYTSGKGSSAAGLTAAVVRDPVTGEFVLEAGALVLADGGVCCIDEFDKMNDEDRVALHEAMEQQTISIAKAGIVATLN 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 10242373 480 ARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH 541
Cdd:pfam00493 163 ARCSILAAANPIFGRYDPKKSIAENINLPPPLLSRFDLIFVLLDKPDEEKDERLAKHIVDLH 224
|
|
| MCM4 |
cd17755 |
DNA replication licensing factor Mcm4; Mcm4 is a helicase that play an important role in ... |
335-637 |
2.89e-120 |
|
DNA replication licensing factor Mcm4; Mcm4 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350661 [Multi-domain] Cd Length: 309 Bit Score: 362.14 E-value: 2.89e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKKALLLLL--VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGV 412
Cdd:cd17755 1 RLARSIAPSIYELEDVKKGILLQLfgGTRKDFTKTGGKYRGDINILLCGDPGTSKSQLLQYVHKISPRGVYTSGKGSSAV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 413 GLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY 492
Cdd:cd17755 81 GLTAYVTRDPDTKQLVLESGALVLSDGGICCIDEFDKMSDSTRSVLHEVMEQQTLSIAKAGIITTLNARTSILASANPIG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 493 GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER-QP 571
Cdd:cd17755 161 SRYNPKLTVVENIDLPPTLLSRFDLIYLVLDKVDEKYDRRLAKHLVSLYLEDTPEHIQDEVLDVEVLTDYISYAREHiHP 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 10242373 572 TVPESLADYITAAYVEMRReARASKDATYTSA-RTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM 637
Cdd:cd17755 241 KLSEEAAQELVQAYVDMRK-MGSDARKRITATpRQLESLIRLAEAHAKMRLSNVVEAEDVEEAVRLI 306
|
|
| MCM5 |
cd17756 |
DNA replication licensing factor Mcm5; Mcm5 is a helicase that play an important role in ... |
335-640 |
3.12e-119 |
|
DNA replication licensing factor Mcm5; Mcm5 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350662 [Multi-domain] Cd Length: 317 Bit Score: 359.77 E-value: 3.12e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKKALLLLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVG 413
Cdd:cd17756 1 IISKSIAPSIYGNEDIKKAIACLLFGGSRKRlPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 414 LTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYG 493
Cdd:cd17756 81 LTASVMRDPSTREFYLEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRTSVLAAANPVFG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 494 RYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSR--QPPAQFEP-LDMKLMRRYIAMCHER- 569
Cdd:cd17756 161 RYDDLKTPGDNIDFQTTILSRFDMIFIVKDKHDEERDITIAKHVINIHASARkaSQSQENEGeIPISKLKRYIAYCRAKc 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 10242373 570 QPTVPESLADYITAAYVEMRREARASKDATYTSA------RTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Cdd:cd17756 241 APRLSEEAAEKLSNHYVTIRKDVRQNELESDNRSsipitvRQLEAIIRISESLAKMELSPIATEKHVEEAIRLFQVS 317
|
|
| MCM_arch |
cd17761 |
archaeal MCM protein; archaeal MCM proteins form a homohexameric ring homologous to the ... |
334-637 |
6.39e-118 |
|
archaeal MCM protein; archaeal MCM proteins form a homohexameric ring homologous to the eukaryotic Mcm2-7 helicase and also function as the replicative helicase at the replication fork
Pssm-ID: 350667 [Multi-domain] Cd Length: 308 Bit Score: 356.38 E-value: 6.39e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 334 EKLAASIAPEIYGHEDVKKALLLLL-VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGV 412
Cdd:cd17761 1 EKIISSIAPSIYGHEDVKEAIALQLfGGVPKVLPDGTRIRGDIHILLVGDPGTAKSQLLKYVSKVAPRAVYTTGKGSTAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 413 GLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY 492
Cdd:cd17761 81 GLTAAVVRDEGTGEWYLEAGALVLADKGIAVVDEIDKMRKEDRSALHEAMEQQTISIAKAGIVATLNARAAVLAAANPKF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 493 GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRqpPAQFEP-LDMKLMRRYIAMCHER-Q 570
Cdd:cd17761 161 GRFDSYRPVAEQIDLPPTLLSRFDLIFVLKDTPNEEKDRRLANHILDTHSGGE--MREIKPeIDPDLLRKYIAYARKNvR 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 10242373 571 PTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM 637
Cdd:cd17761 239 PVLTEEAKQLIKDFYVEMRKSGQETPSPVPITARQLEALVRLSEASARMRLSQEVTLEDAERAIRIM 305
|
|
| MCM6 |
cd17757 |
DNA replication licensing factor Mcm6; Mcm6 is a helicase that play an important role in ... |
335-640 |
1.74e-114 |
|
DNA replication licensing factor Mcm6; Mcm6 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350663 [Multi-domain] Cd Length: 307 Bit Score: 347.43 E-value: 1.74e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKKALLLLLVG-GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVG 413
Cdd:cd17757 1 NLVRSIAPSIYGHEEVKKGILLMLLGgVHKITREGISLRGDINVCIVGDPSTAKSQFLKYVEEFSPRAVYTSGKASSAAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 414 LTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYG 493
Cdd:cd17757 81 LTAAVVRDEETGDFVIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPVGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 494 RYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHItyVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTV 573
Cdd:cd17757 161 RYDRSKSLKQNINISAPIMSRFDLFFVLLDECNEVTDYAIASHI--VDLHSKREEAIEPPFTAEQLKRYIAYARTFKPKL 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 10242373 574 PESLADYITAAYVEMR-REARASKDATY-TSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Cdd:cd17757 239 TKEAKDELVEQYKELRqDDASGSTRSSYrITVRQLESLIRLSEAIARLHCSDEVTPEHVEEAARLLKKS 307
|
|
| MCM2 |
cd17753 |
DNA replication licensing factor Mcm2; Mcm2 is a helicase that play an important role in ... |
335-637 |
2.09e-114 |
|
DNA replication licensing factor Mcm2; Mcm2 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350659 [Multi-domain] Cd Length: 325 Bit Score: 347.90 E-value: 2.09e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVG 413
Cdd:cd17753 1 RIINSIAPSIYGHDDIKTAIALALFGGVAKNPGGKhRIRGDINVLLLGDPGTAKSQFLKYVEKTAHRAVFTTGQGASAVG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 414 LTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYG 493
Cdd:cd17753 81 LTASVRKDPVTKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 494 RYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHItyVHQHSRQPPA--------------------QFEP 553
Cdd:cd17753 161 RYNPTLTFAQNVNLTEPILSRFDILCVVRDTVDPEEDERLAKFV--VGSHVRSHPEndedregeeeknqrqrpketKVEP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 554 LDMKLMRRYIAMCHER-QPTVPESLADYITAAYVEMRREARASKDATYTsARTLLAILRLSTALARLRMVDIVEKEDVNE 632
Cdd:cd17753 239 IPQELLRKYIHYAREKvRPKLNQMDMDKVSRVYADLRKESMATGSLPIT-VRHLESIIRISEAHAKMHLREYVSEEDVDM 317
|
....*
gi 10242373 633 AIRLM 637
Cdd:cd17753 318 AIRVM 322
|
|
| MCM3 |
cd17754 |
DNA replication licensing factor Mcm3; Mcm3 is a helicase that play an important role in ... |
336-637 |
4.27e-112 |
|
DNA replication licensing factor Mcm3; Mcm3 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350660 [Multi-domain] Cd Length: 299 Bit Score: 340.98 E-value: 4.27e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 336 LAASIAPEIYGHEDVKKALLLLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGL 414
Cdd:cd17754 2 LSKSLAPSIYGHEYIKKAILLMLLGGVEKNlENGSHLRGDINILLVGDPSVAKSQLLRYVLNTAPLAIATTGRGSSGVGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 415 TAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGR 494
Cdd:cd17754 82 TAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHASLNARCSVLAAANPVYGR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 495 YNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHsrqppaqfepldMKLMRRYIAMCHER-QPTV 573
Cdd:cd17754 162 YDVYKTPMENIGLPDSLLSRFDLLFIVLDDIDEERDRSISEHVLRMHRY------------IKFLRKYIHYAKERiKPKL 229
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 10242373 574 PESLADYITAAYVEMRREARASKDATYTS---ARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM 637
Cdd:cd17754 230 TQEAAEYIAEEYADLRNDDNTKTDKARTSpitARTLETLIRLATAHAKARLSKTVDKVDAEVALNLL 296
|
|
| PTZ00111 |
PTZ00111 |
DNA replication licensing factor MCM4; Provisional |
137-671 |
4.22e-82 |
|
DNA replication licensing factor MCM4; Provisional
Pssm-ID: 173403 [Multi-domain] Cd Length: 915 Bit Score: 279.57 E-value: 4.22e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 137 YFRGPSSSKPRVIREVRADSvgkLLTVRGIVTRVSEVKPRMVVATYTC---DQCGAETYQPIQSPTFMPLIMCPSQE--- 210
Cdd:PTZ00111 209 LMNKPVSDCVGNLEPSMADS---LVQFSGTVVRQTWIVPEITMACFRCrgqKKIGLNDYQPCTCEHYEYVIQGEVNEpll 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 211 CQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIP--------------------RSITVVLEGENTRIAQPGDH 270
Cdd:PTZ00111 286 CNECNSKYTFELNHNMCVYSTKKIVKLLQSNSSLNNPDKDgldnsvdnsglngeiymkdnEVINLNLYDDLIDSVKTGDR 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 271 VSVTGIF--LPVlRTGFQQMAQGLLSETYLEA-HwiVKMTKSDDD---------VSGAGELSSEELKQIAE----EDFYE 334
Cdd:PTZ00111 366 VTVVGILkvTPI-RTSTTRRTLKSLYTYFVNViH--VKVINSTNAnqpekglkyLGNENDFSDLQVYKILElsrnPMIYR 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 335 KLAASIAPEIYGHEDVKK----------ALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT 404
Cdd:PTZ00111 443 ILLDSFAPSIKARNNVKIgllcqlfsgnKNSSDFNKSPDACYKVDNFRGIINVLLCGDPGTAKSQLLHYTHLLSPRSIYT 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 405 TGRGSSGVGLTAAV-LRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCS 483
Cdd:PTZ00111 523 SGKSSSSVGLTASIkFNESDNGRAMIQPGAVVLANGGVCCIDELDKCHNESRLSLYEVMEQQTVTIAKAGIVATLKAETA 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 484 ILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI-----------------TY------- 539
Cdd:PTZ00111 603 ILASCNPINSRYNKNKAVIENINISPSLFTRFDLIYLVLDHIDQDTDQLISLSIakdfllphmtgsgndedTYdrsntmh 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 540 VHQHSRQPPAQFEPLDMKLMRRYIAMCHER-QPTVPESLADYITAAYVEMRR------------EARASKD--------- 597
Cdd:PTZ00111 683 VEDESLRSEKDYNKNDLDMLRMYIKFSKLHcFPKLSDEAKKVITREYVKMRQgnfqtsnldeleHAQEDDDddlyyqssg 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 598 --ATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSK-----DSLLGE-------KGQTARTQRPADVIFA 663
Cdd:PTZ00111 763 trMIYVSSRMISSIIRISVSLARMRLSTVVTPADALQAVQIVKSSTfqslvDPTTGKidfdqlhQGITTNKMQQLNQMYE 842
|
....*...
gi 10242373 664 TIRELVSR 671
Cdd:PTZ00111 843 QVLSVLTR 850
|
|
| MCM9 |
cd17760 |
DNA helicase Mcm9; Mcm9 plays an important role homologous recombination repair. It forms a ... |
336-640 |
6.58e-82 |
|
DNA helicase Mcm9; Mcm9 plays an important role homologous recombination repair. It forms a complex with Mcm8 that is required for homologous recombination (HR) repair induced by DNA interstrand crosslinks (ICLs).
Pssm-ID: 350666 [Multi-domain] Cd Length: 299 Bit Score: 262.48 E-value: 6.58e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 336 LAASIAPEIYGHEDVKKALLLLLV---GGVDQSpqGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGV 412
Cdd:cd17760 2 ILASLCPQVFGLYNVKLAVAMVLAggvQRIDAS--GTRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTAGIGSTSA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 413 GLTAAVLRDSvsGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAy 492
Cdd:cd17760 80 GLTVTAVKDG--GEWNLEAGALVLADGGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGLVCKLNTRTTILAATNPK- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 493 GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITyvhqHSRQPPAQFEPL-DMKLMRRYIAMCHERQP 571
Cdd:cd17760 157 GQYDPNESISVNIALASPLLSRFDLVLVLLDTKNEDWDRIISSFIL----ENKGEPSKSSKLwSMEKMRTYFCLIKNLRP 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 10242373 572 TVPESlADYITAAYVEMRREArASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Cdd:cd17760 233 VLSDE-ANAILLRYYQLQRQS-DCRNAARTTIRMLESLIRLAEAHARLMFRETVTEEDAITVVSVMESS 299
|
|
| MCM8 |
cd17759 |
DNA helicase Mcm8; Mcm8 plays an important role homologous recombination repair. It forms a ... |
336-640 |
1.52e-72 |
|
DNA helicase Mcm8; Mcm8 plays an important role homologous recombination repair. It forms a complex with Mcm9 that is required for homologous recombination (HR) repair induced by DNA interstrand crosslinks (ICLs).
Pssm-ID: 350665 [Multi-domain] Cd Length: 289 Bit Score: 237.43 E-value: 1.52e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 336 LAASIAPEIYGHEDVKKALLLLL---VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGV 412
Cdd:cd17759 2 IVNSLCPAIYGHELVKAGLLLSLfggKQKYADDKNRIPIRGDPHVLIVGDPGLGKSQMLQAACNIAPRGVYVCGNTTTTS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 413 GLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEaDRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY 492
Cdd:cd17759 82 GLTVTLTKDGRSGDFALEAGALVLGDQGICGIDEFDKMGS-QHQALLEAMEQQSVSLAKAGVVCSLPARTSVIAAANPVG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 493 GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHityvhqhsrqppaqfepldMKLMRRYIAmcHERQ-- 570
Cdd:cd17759 161 GHYNKGKTVSENLKMGPALLSRFDLVFILLDTPSEEHDHLLSEH-------------------HQLLRKYIS--YARQyv 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10242373 571 -PTVPESLADYITAAYVEMRREARaSKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Cdd:cd17759 220 nPVLSKDASEALQEFYLELRKQNQ-LADSSPITTRQLESLIRLTEARARLELREEATKEDAEDVIEIMKES 289
|
|
| MCM_OB |
pfam17207 |
MCM OB domain; This family contains an OB-fold found within MCM proteins. This domain contains ... |
149-280 |
5.73e-52 |
|
MCM OB domain; This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif.
Pssm-ID: 465381 [Multi-domain] Cd Length: 126 Bit Score: 176.13 E-value: 5.73e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 149 IREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTfmpliMCPSQECQtnrSGGRLYLQTRGSK 228
Cdd:pfam17207 2 IRDLRSEHIGKLVSVSGIVTRTSEVRPKLKKATFTCRKCGHTVGVKITEPT-----KCPNPECG---NKDPFKLVHEKSK 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 10242373 229 FVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPV 280
Cdd:pfam17207 74 FVDFQKIKIQESPEEVPAGELPRSLDVILDDDLVDRVKPGDRVTVTGIYRVV 125
|
|
| MCM_lid |
pfam17855 |
MCM AAA-lid domain; This entry represents the AAA-lid domain found in MCM proteins. |
558-641 |
9.01e-26 |
|
MCM AAA-lid domain; This entry represents the AAA-lid domain found in MCM proteins.
Pssm-ID: 465534 [Multi-domain] Cd Length: 86 Bit Score: 101.47 E-value: 9.01e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 558 LMRRYIAMCHER-QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRL 636
Cdd:pfam17855 2 LLRKYIAYAREKiKPKLSEEAREKLVDAYVELRKESTGSGSSIPITVRQLESLIRLSEAHAKMRLSEIVTEEDVEEAIRL 81
|
....*
gi 10242373 637 MEMSK 641
Cdd:pfam17855 82 LKESL 86
|
|
| MCM_N |
pfam14551 |
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins. |
10-103 |
5.66e-16 |
|
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins.
Pssm-ID: 464206 [Multi-domain] Cd Length: 95 Bit Score: 73.87 E-value: 5.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 10 KEKVKKFLQEFYyenELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYK 89
Cdd:pfam14551 1 KRKFKDFLEEFR---EDGDGEFKYRDQLREMIEREQRSLEVDLDDLREFDPDLAEALLENPYEYLPLFEEALKEVVKELS 77
|
90
....*....|....
gi 10242373 90 EKEVVNKDVLDVYI 103
Cdd:pfam14551 78 EDPDYAEEEKEFQV 91
|
|
| AAA_5 |
pfam07728 |
AAA domain (dynein-related subfamily); This Pfam entry includes some of the AAA proteins not ... |
376-515 |
3.31e-06 |
|
AAA domain (dynein-related subfamily); This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Pssm-ID: 400191 [Multi-domain] Cd Length: 135 Bit Score: 46.90 E-value: 3.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 376 HICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSgvGLTAAVLRDSVS---GELTLEGGALVLADQ--GVCCIDEFDKm 450
Cdd:pfam07728 1 GVLLVGPPGTGKTELAERLAAALSNRPVFYVQLTR--DTTEEDLFGRRNidpGGASWVDGPLVRAARegEIAVLDEINR- 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 10242373 451 AEADRTAI-HEVMEQQTISIAKAGILTTLNARC-SILAAANPAYGRYNPrrsleqnvqLPAALLSRF 515
Cdd:pfam07728 78 ANPDVLNSlLSLLDERRLLLPDGGELVKAAPDGfRLIATMNPLDRGLNE---------LSPALRSRF 135
|
|
| MoxR |
COG0714 |
MoxR-like ATPase [General function prediction only]; MoxR-like ATPase is part of the Pathway ... |
376-630 |
8.11e-06 |
|
MoxR-like ATPase [General function prediction only]; MoxR-like ATPase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 440478 [Multi-domain] Cd Length: 292 Bit Score: 48.24 E-value: 8.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 376 HICLMGDPGVAKSQL---------LSYIdrlapRSQYTTG-RGSSGVGLTAAVLRDsvsGELTLEGGALVladQGVCCID 445
Cdd:COG0714 33 HLLLEGVPGVGKTTLakalaralgLPFI-----RIQFTPDlLPSDILGTYIYDQQT---GEFEFRPGPLF---ANVLLAD 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 446 EFDKmaeAD-RT--AIHEVMEQQTISIAKAGIltTLNARCSILAAANP--AYGRYnprrsleqnvQLPAALLSRFDL-LW 519
Cdd:COG0714 102 EINR---APpKTqsALLEAMEERQVTIPGGTY--KLPEPFLVIATQNPieQEGTY----------PLPEAQLDRFLLkLY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 520 LiqDRPDRDNDLRLaqhityVHQHSRQPPAQFEP-LDMKLMRRYIAMCheRQPTVPESLADYITAAYVEMRREARASKDA 598
Cdd:COG0714 167 I--GYPDAEEEREI------LRRHTGRHLAEVEPvLSPEELLALQELV--RQVHVSEAVLDYIVDLVRATREHPDLRKGP 236
|
250 260 270
....*....|....*....|....*....|..
gi 10242373 599 tytSARTLLAILRLSTALARLRMVDIVEKEDV 630
Cdd:COG0714 237 ---SPRASIALLRAARALALLDGRDYVTPDDV 265
|
|
| PRK14969 |
PRK14969 |
DNA polymerase III subunits gamma and tau; Provisional |
500-701 |
2.10e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237873 [Multi-domain] Cd Length: 527 Bit Score: 41.27 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 500 SLEQNVQLPAALLSRFDLLWLI-----QDRPDRDNDLRLAQHIT-------Y-VHQHSRQ----PPAQFEPLDMKLMRRY 562
Cdd:PRK14969 277 SFDAALQDLAALLHRLAIAQTVpdsiaDDLPERDRLLDLAKRLSpediqlyYqIALHGRRdlglAPDEYAGFTMTLLRML 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 563 IAMCHERQPTVPesLADYITAAYV---EMRREARASKDATYTSART--------LLAILRLStALARLrMVDIVEKEDVN 631
Cdd:PRK14969 357 AFRPSEQDSGAG--RAPGAVPGVNrtrAVPTAAPAAPAAATPSDRQsfngnwraLVDQLKLS-GLARE-LAQNCELKSFS 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10242373 632 E---AIRLMEMSKdSLLG----EKGQTARTQ---RPADVIFA-------TIRELVSRGRSVHFSEAEQRCISRGFTPA-- 692
Cdd:PRK14969 433 EdriELRVPEAHK-HLLDkpyqDKLQAALEQhfgRPVQLIFSlggvsgnTPAELVSREKAERQSQAESAIESDGFVQEli 511
|
250
....*....|
gi 10242373 693 -QFQAALDEY 701
Cdd:PRK14969 512 eDFDATLIPS 521
|
|
| |
