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Conserved domains on  [gi|262263319|ref|NP_034107|]
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cystatin-F precursor [Mus musculus]

Protein Classification

cystatin family protein( domain architecture ID 11249387)

cystatin family protein similar to cystatins which are a family of cysteine protease inhibitors

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 35-144 4.70e-24

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


:

Pssm-ID: 214484  Cd Length: 107  Bit Score: 89.41  E-value: 4.70e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262263319    35 PGFPKTIETNNPGVLKAARHSVEKFNNCTNDIFLFKESHVSKALVQVVKGLKYMLEVKIGRTTCRKTMhHQLDNCDFQTN 114
Cdd:smart00043   3 LGGPSDVPPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLS-VDLENCPFLDQ 81

                           90       100       110
                   ....*....|....*....|....*....|
gi 262263319   115 PALKrtlyCYSEVWVIPWLHSFEVPVLLCQ 144
Cdd:smart00043  82 GEKF----CTAKVWEKPWENKIKLVEFKCT 107
 
Name Accession Description Interval E-value
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 35-144 4.70e-24

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 214484  Cd Length: 107  Bit Score: 89.41  E-value: 4.70e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262263319    35 PGFPKTIETNNPGVLKAARHSVEKFNNCTNDIFLFKESHVSKALVQVVKGLKYMLEVKIGRTTCRKTMhHQLDNCDFQTN 114
Cdd:smart00043   3 LGGPSDVPPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLS-VDLENCPFLDQ 81

                           90       100       110
                   ....*....|....*....|....*....|
gi 262263319   115 PALKrtlyCYSEVWVIPWLHSFEVPVLLCQ 144
Cdd:smart00043  82 GEKF----CTAKVWEKPWENKIKLVEFKCT 107
CY cd00042
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 36-143 7.71e-19

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 238002 [Multi-domain]  Cd Length: 105  Bit Score: 75.97  E-value: 7.71e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262263319  36 GFPKTIETNNPGVLKAARHSVEKFNNCTNDIFlFKESHVSKALVQVVKGLKYMLEVKIGRTTCRKtmHHQLDNCDFQTNP 115
Cdd:cd00042    1 GGPSDIPANDPEVQELADFAVAEYNKKSNDKY-LEFFKVLSAKSQVVAGTNYYITVEAGDTNCKK--SSVPLDCPDCKLL 77

                         90       100
                 ....*....|....*....|....*...
gi 262263319 116 ALKRTLYCYSEVWVIPWLHSFEVPVLLC 143
Cdd:cd00042   78 EEGKKKFCTAKVWEKPWENFKELLSFKC 105
Cystatin pfam00031
Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. ...
 36-132 9.40e-13

Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 is related to this family but has not been included.


Pssm-ID: 425431  Cd Length: 92  Bit Score: 60.04  E-value: 9.40e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262263319   36 GFPKTIETNNPGVLKAARHSVEKFNNCTNDiFLFKESHVSKALVQVVKGLKYMLEVKIGRTTCRKTMhHQLDNCDFQTNP 115
Cdd:pfam00031   1 GGLSPIPDNSPELQEALDFALAEYNAKTDN-YYFELVEVKRAKSQVVAGTNYFIKVEVGETDCSKSK-KLLEDCPLLDEK 78

                          90
                  ....*....|....*..
gi 262263319  116 ALKrtlYCYSEVWVIPW 132
Cdd:pfam00031  79 WLG---LCSAQVYKVPW 92
 
Name Accession Description Interval E-value
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 35-144 4.70e-24

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 214484  Cd Length: 107  Bit Score: 89.41  E-value: 4.70e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262263319    35 PGFPKTIETNNPGVLKAARHSVEKFNNCTNDIFLFKESHVSKALVQVVKGLKYMLEVKIGRTTCRKTMhHQLDNCDFQTN 114
Cdd:smart00043   3 LGGPSDVPPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLS-VDLENCPFLDQ 81

                           90       100       110
                   ....*....|....*....|....*....|
gi 262263319   115 PALKrtlyCYSEVWVIPWLHSFEVPVLLCQ 144
Cdd:smart00043  82 GEKF----CTAKVWEKPWENKIKLVEFKCT 107
CY cd00042
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 36-143 7.71e-19

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 238002 [Multi-domain]  Cd Length: 105  Bit Score: 75.97  E-value: 7.71e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262263319  36 GFPKTIETNNPGVLKAARHSVEKFNNCTNDIFlFKESHVSKALVQVVKGLKYMLEVKIGRTTCRKtmHHQLDNCDFQTNP 115
Cdd:cd00042    1 GGPSDIPANDPEVQELADFAVAEYNKKSNDKY-LEFFKVLSAKSQVVAGTNYYITVEAGDTNCKK--SSVPLDCPDCKLL 77

                         90       100
                 ....*....|....*....|....*...
gi 262263319 116 ALKRTLYCYSEVWVIPWLHSFEVPVLLC 143
Cdd:cd00042   78 EEGKKKFCTAKVWEKPWENFKELLSFKC 105
Cystatin pfam00031
Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. ...
 36-132 9.40e-13

Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 is related to this family but has not been included.


Pssm-ID: 425431  Cd Length: 92  Bit Score: 60.04  E-value: 9.40e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262263319   36 GFPKTIETNNPGVLKAARHSVEKFNNCTNDiFLFKESHVSKALVQVVKGLKYMLEVKIGRTTCRKTMhHQLDNCDFQTNP 115
Cdd:pfam00031   1 GGLSPIPDNSPELQEALDFALAEYNAKTDN-YYFELVEVKRAKSQVVAGTNYFIKVEVGETDCSKSK-KLLEDCPLLDEK 78

                          90
                  ....*....|....*..
gi 262263319  116 ALKrtlYCYSEVWVIPW 132
Cdd:pfam00031  79 WLG---LCSAQVYKVPW 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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