|
Name |
Accession |
Description |
Interval |
E-value |
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
465-857 |
5.37e-117 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 360.17 E-value: 5.37e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 465 GRPTQRvSGLYQRLESK-CSMGFHAGWEQPHWFYkpgqdtqyrpsfrrtnwfEPVGSEYKQVMQRVAVTDLSPFGKFNIK 543
Cdd:COG0404 1 FRPLRR-TPLHDRHVALgAKFVDFGGWEMPVQYP------------------GGVIAEHLAVREAVGLFDVSHMGKIEVT 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 544 GQDSIRLLDHLFANVIPK--VGFTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEeAVKGGYDVEIK 621
Cdd:COG0404 62 GPDAAAFLDRLVTNDVSKlkPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEE-HLPPDFDVTIT 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 622 NITDELGVLGVAGPQARKVLQKLTSEDLSDdvFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNA 701
Cdd:COG0404 141 DVTDDWALLAVQGPKAREVLAKLTDADLSA--LPFMSFREGTVAGVPVRVSRTGYTGEDGFEIYVPAEDAEALWDALLEA 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 702 GQEEGIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKPaDFIGKQALKQIKAKGLKRRLVCLTLaTDD 781
Cdd:COG0404 219 GEEFGVKPCGLGARDTLRLEAGYPLYGHELDETTTPLEAGLGWAVKLDKG-DFIGKEALLRQKEEGPRRKLVGLEL-DGR 296
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24797151 782 VDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVGQQVEVELLGKNYPAVIIQEPLVltEPTRNRL 857
Cdd:COG0404 297 GVPRAGAPVLADGEVVGEVTSGTFSPTLGKSIALAYVPAGLARPGTELEVEIRGKRVPAEVVKPPFY--DPEGERL 370
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
49-431 |
1.01e-88 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 286.03 E-value: 1.01e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 49 RAETVIIGGGCVGVSLAYHLAKAGMkDVVLLEKSELTAGSTWHAAGL--TTYFHPGIN-LKKIHYDSIKLYEKLEEETGQ 125
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGL-DVTVLERGRPGSGASGRNAGQlrPGLAALADRaLVRLAREALDLWRELAAELGI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 126 VVGFHQPGSIRLATTPVRVDEFKY---QMTRTGWHATeqyLIEPEKIQEMFPLLNMNKVLAGLYNPGDGHIDPYSLTMAL 202
Cdd:COG0665 81 DCDFRRTGVLYLARTEAELAALRAeaeALRALGLPVE---LLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRAL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 203 AAGARKCGALLKYPAPVTSLKARSDGTWDVETPQGSMRANRIVNAAGFWAREVGKMIGLEHPLIPVQHQYVVTstisEVK 282
Cdd:COG0665 158 ARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLLPMLGLRLPLRPVRGYVLVT----EPL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 283 ALKRELPVLRDleGSYYLRQERDG-LLFGPYESqekmkvqdswvtngvppgFGKELFESDLDRIMEHIKAAMEMVPVLKK 361
Cdd:COG0665 234 PDLPLRPVLDD--TGVYLRPTADGrLLVGGTAE------------------PAGFDRAPTPERLEALLRRLRRLFPALAD 293
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24797151 362 ADIINVVNGPITYSPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNR 431
Cdd:COG0665 294 AEIVRAWAGLRPMTPDGLPIIGRLPGAPGLYVATGHgGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
488-745 |
1.25e-69 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 230.94 E-value: 1.25e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 488 AGWEQPHWFYKPGQDtqyrpsfrrtnwfepvgSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLDHLFANVI--PKVGFT 565
Cdd:pfam01571 15 AGWEMPVQYGSNGIL-----------------AEHRAVREAAGLFDVSHMGKIEVSGPDAAAFLQRLTTNDVskLKPGRA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 566 NISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVKGgyDVEIKNITDELGVLGVAGPQARKVLQKLT 645
Cdd:pfam01571 78 TYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAEKL--DVVVVDVTDDYALLALQGPKAREVLEKLT 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 646 SEDLSDDvFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEEGIDNFGTYAMNALRLEKAFR 725
Cdd:pfam01571 156 DGDLLEA-LPFFSFREIEIGGVPVRVSRTGYTGEDGFEIYVPAEDAVELWEALLEAGAELGLRPAGLGARDSLRLEAGLP 234
|
250 260
....*....|....*....|
gi 24797151 726 AWGLEMNCDTNPLEAGLEYF 745
Cdd:pfam01571 235 LYGHDLDEETTPLEAGLGWA 254
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
474-848 |
4.26e-65 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 222.30 E-value: 4.26e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 474 LYQR-LESKCSMGFHAGWEQPHWFykpgqdtqyrpsfrrtnwfepvGS---EYKQVMQRVAVTDLSPFGKFNIKGQDSIR 549
Cdd:PRK00389 7 LYDLhVALGAKMVDFGGWEMPVQY----------------------GSiieEHHAVRTDAGLFDVSHMGEVDVTGPDALA 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 550 LLDHLFANVIPK--VGFTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAvkGGYDVEIKNITDEL 627
Cdd:PRK00389 65 FLQYLLANDVSKlkPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVVNAANREKDLAWIKSHA--AGFGVEVTDRSDDL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 628 GVLGVAGPQARKVLQKLTSEDLSD-DVFKFLQTKSLKVSNIpvtaiRIS---YTGELGWELYHRREDSVALYDAIMNAGq 703
Cdd:PRK00389 143 AMIAVQGPKAREKLQKLTDADLSElKPFFGAQGAEVGGGDV-----LVArtgYTGEDGFEIYLPAEDAEALWDALLEAG- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 704 eegIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLaTDDVD 783
Cdd:PRK00389 217 ---VKPCGLGARDTLRLEAGMPLYGQDMDETITPLEAGLGWTVKLEEKRDFIGREALEAQKEAGVERKLVGLEL-EERGI 292
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24797151 784 PEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPvqlSEVGQQVEVELLGKNYPAVIIQEPLV 848
Cdd:PRK00389 293 PRHGYPVLADGEEIGEVTSGTFSPTLGKSIALAYVP---AGVGDEVEVEIRGKQVPAKVVKPPFV 354
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
53-414 |
4.81e-63 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 216.11 E-value: 4.81e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGMkDVVLLEK-SELTAGSTWHAAGLttyFHPGI------NLKKIHYDSIKLYEKLEEETGQ 125
Cdd:pfam01266 3 VVIGGGIVGLSTAYELARRGL-SVTLLERgDDPGSGASGRNAGL---IHPGLrylepsELARLALEALDLWEELEEELGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 126 VVGFHQPGSIRLATTPV--RVDEFKYQMTRTGWHAteqYLIEPEKIQEMFPLLnmNKVLAGLYNPGDGHIDPYSLTMALA 203
Cdd:pfam01266 79 DCGFRRCGVLVLARDEEeeALEKLLAALRRLGVPA---ELLDAEELRELEPLL--PGLRGGLFYPDGGHVDPARLLRALA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 204 AGARKCGALLKYPAPVTSLKaRSDGTWDVETPqGSMRAnrIVNAAGFWAREVGkMIGLEHPLIPVQHQYVVTSTISEvKA 283
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTGIE-EEGGVWGVVTT-GEADA--VVNAAGAWADLLA-LPGLRLPVRPVRGQVLVLEPLPE-AL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 284 LKRELPVLRDLEGSYYLRQERDG-LLFGPYEsqekmkvqdswvtngvpPGFGKELFESDLDRIMEHIKAAMEMVPVLkkA 362
Cdd:pfam01266 228 LILPVPITVDPGRGVYLRPRADGrLLLGGTD-----------------EEDGFDDPTPDPEEIEELLEAARRLFPAL--A 288
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 24797151 363 DIINVVNGPITYsPDILPMVGPHqGVRNYWVAIGF-GYGIIHAGGVGKYLSDW 414
Cdd:pfam01266 289 DIERAWAGLRPL-PDGLPIIGRP-GSPGLYLATGHgGHGLTLAPGIGKLLAEL 339
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
417-472 |
7.97e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.10 E-value: 7.97e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 24797151 417 HGEPPFDLIELDPNRYGK-WTTTQYTEAKARESYGFNNIVGYPKEERFAGRPtQRVS 472
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPhQNNREYLRERVAENYGEVYDIHHPNEEREAGRP-LRTS 56
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
51-434 |
1.67e-11 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 66.78 E-value: 1.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 51 ETVIIGGGCVGVSLAYHLAKAGMKdVVLLEKSEL--TAGS------TWHAAGLTTYFHPginlkkIHYDSIKLYEKLEEE 122
Cdd:TIGR01377 2 DVIVVGAGIMGCFAAYHLAKHGKK-TLLLEQFDLphSRGSshgqsrIIRKAYPEDFYTP------MMLECYQLWAQLEKE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 123 TGQVVgFHQPGSIRLAttPVRVDEFKYQMTRTGWHATEQYLIEPEKIQEMFPLLNMNKVLAGLYNPGDGHIDPYSLTMAL 202
Cdd:TIGR01377 75 AGTKL-HRQTGLLLLG--PKENQFLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRAL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 203 AAGARKCGALLKYPAPVTSLKaRSDGTWDVETPQGSMRANRIVNAAGFWAREVGKMIGLEHPLIPVQhQYVVTSTISEVK 282
Cdd:TIGR01377 152 QELAEAHGATVRDGTKVVEIE-PTELLVTVKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIPLQPLR-INVCYWREKEPG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 283 ALK--RELPVL--RDLEGSYYlrqerdGLLFGPYESQEKMKVQ-DSWV---TNGVPPGFGKElfesDLDRIMEHIKAAM- 353
Cdd:TIGR01377 230 SYGvsQAFPCFlvLGLNPHIY------GLPSFEYPGLMKVYYHhGQQIdpdERDCPFGADIE----DVQILRKFVRDHLp 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 354 EMVPVLKKADIINVVNgpitySPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY 432
Cdd:TIGR01377 300 GLNGEPKKGEVCMYTN-----TPDEHFVIDLHPKYDNVVIGAGFsGHGFKLAPVVGKILAELAMKLKPSYDLAIFSLNRF 374
|
..
gi 24797151 433 GK 434
Cdd:TIGR01377 375 AL 376
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
53-431 |
4.06e-11 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 65.63 E-value: 4.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGmKDVVLLEKSEL--TAGS-------TWHAaglttYF-HPGinlkkihY-----DSIKLYE 117
Cdd:PRK11259 7 IVIGLGSMGSAAGYYLARRG-LRVLGLDRFMPphQQGSshgdtriIRHA-----YGeGPA-------YvplvlRAQELWR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 118 KLEEETGQVVgFHQPGSIRLAttpVRVDEFkyqmTRTGWHATEQY-----LIEPEKIQEMFPLLNMNKVLAGLYNPGDGH 192
Cdd:PRK11259 74 ELERESGEPL-FVRTGVLNLG---PADSDF----LANSIRSARQHglpheVLDAAEIRRRFPQFRLPDGYIALFEPDGGF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 193 IDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDGTwDVETPQGSMRANRIVNAAGFWAREvgkMIG-LEHPLIP---V 268
Cdd:PRK11259 146 LRPELAIKAHLRLAREAGAELLFNEPVTAIEADGDGV-TVTTADGTYEAKKLVVSAGAWVKD---LLPpLELPLTPvrqV 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 269 QHQYVVTSTISEvkalKRELPVlrdlegsyYLRQERDGLLF-G-PYESQEKMKVqdswvtngvppgfGKELF------ES 340
Cdd:PRK11259 222 LAWFQADGRYSE----PNRFPA--------FIWEVPDGDQYyGfPAENGPGLKI-------------GKHNGgqeitsPD 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 341 DLDRIMEHIKAAMEMVPVLKK--ADIINVVNGPI---TYSPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDW 414
Cdd:PRK11259 277 ERDRFVTVAEDGAELRPFLRNylPGVGPCLRGAActyTNTPDEHFIIDTLPGHPNVLVASGCsGHGFKFASVLGEILADL 356
|
410
....*....|....*..
gi 24797151 415 ILHGEPPFDLIELDPNR 431
Cdd:PRK11259 357 AQDGTSDFDLSPFSLSR 373
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
465-857 |
5.37e-117 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 360.17 E-value: 5.37e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 465 GRPTQRvSGLYQRLESK-CSMGFHAGWEQPHWFYkpgqdtqyrpsfrrtnwfEPVGSEYKQVMQRVAVTDLSPFGKFNIK 543
Cdd:COG0404 1 FRPLRR-TPLHDRHVALgAKFVDFGGWEMPVQYP------------------GGVIAEHLAVREAVGLFDVSHMGKIEVT 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 544 GQDSIRLLDHLFANVIPK--VGFTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEeAVKGGYDVEIK 621
Cdd:COG0404 62 GPDAAAFLDRLVTNDVSKlkPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEE-HLPPDFDVTIT 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 622 NITDELGVLGVAGPQARKVLQKLTSEDLSDdvFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNA 701
Cdd:COG0404 141 DVTDDWALLAVQGPKAREVLAKLTDADLSA--LPFMSFREGTVAGVPVRVSRTGYTGEDGFEIYVPAEDAEALWDALLEA 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 702 GQEEGIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKPaDFIGKQALKQIKAKGLKRRLVCLTLaTDD 781
Cdd:COG0404 219 GEEFGVKPCGLGARDTLRLEAGYPLYGHELDETTTPLEAGLGWAVKLDKG-DFIGKEALLRQKEEGPRRKLVGLEL-DGR 296
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24797151 782 VDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVGQQVEVELLGKNYPAVIIQEPLVltEPTRNRL 857
Cdd:COG0404 297 GVPRAGAPVLADGEVVGEVTSGTFSPTLGKSIALAYVPAGLARPGTELEVEIRGKRVPAEVVKPPFY--DPEGERL 370
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
49-431 |
1.01e-88 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 286.03 E-value: 1.01e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 49 RAETVIIGGGCVGVSLAYHLAKAGMkDVVLLEKSELTAGSTWHAAGL--TTYFHPGIN-LKKIHYDSIKLYEKLEEETGQ 125
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGL-DVTVLERGRPGSGASGRNAGQlrPGLAALADRaLVRLAREALDLWRELAAELGI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 126 VVGFHQPGSIRLATTPVRVDEFKY---QMTRTGWHATeqyLIEPEKIQEMFPLLNMNKVLAGLYNPGDGHIDPYSLTMAL 202
Cdd:COG0665 81 DCDFRRTGVLYLARTEAELAALRAeaeALRALGLPVE---LLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRAL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 203 AAGARKCGALLKYPAPVTSLKARSDGTWDVETPQGSMRANRIVNAAGFWAREVGKMIGLEHPLIPVQHQYVVTstisEVK 282
Cdd:COG0665 158 ARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLLPMLGLRLPLRPVRGYVLVT----EPL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 283 ALKRELPVLRDleGSYYLRQERDG-LLFGPYESqekmkvqdswvtngvppgFGKELFESDLDRIMEHIKAAMEMVPVLKK 361
Cdd:COG0665 234 PDLPLRPVLDD--TGVYLRPTADGrLLVGGTAE------------------PAGFDRAPTPERLEALLRRLRRLFPALAD 293
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24797151 362 ADIINVVNGPITYSPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNR 431
Cdd:COG0665 294 AEIVRAWAGLRPMTPDGLPIIGRLPGAPGLYVATGHgGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
488-745 |
1.25e-69 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 230.94 E-value: 1.25e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 488 AGWEQPHWFYKPGQDtqyrpsfrrtnwfepvgSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLDHLFANVI--PKVGFT 565
Cdd:pfam01571 15 AGWEMPVQYGSNGIL-----------------AEHRAVREAAGLFDVSHMGKIEVSGPDAAAFLQRLTTNDVskLKPGRA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 566 NISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVKGgyDVEIKNITDELGVLGVAGPQARKVLQKLT 645
Cdd:pfam01571 78 TYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAEKL--DVVVVDVTDDYALLALQGPKAREVLEKLT 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 646 SEDLSDDvFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEEGIDNFGTYAMNALRLEKAFR 725
Cdd:pfam01571 156 DGDLLEA-LPFFSFREIEIGGVPVRVSRTGYTGEDGFEIYVPAEDAVELWEALLEAGAELGLRPAGLGARDSLRLEAGLP 234
|
250 260
....*....|....*....|
gi 24797151 726 AWGLEMNCDTNPLEAGLEYF 745
Cdd:pfam01571 235 LYGHDLDEETTPLEAGLGWA 254
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
474-848 |
4.26e-65 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 222.30 E-value: 4.26e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 474 LYQR-LESKCSMGFHAGWEQPHWFykpgqdtqyrpsfrrtnwfepvGS---EYKQVMQRVAVTDLSPFGKFNIKGQDSIR 549
Cdd:PRK00389 7 LYDLhVALGAKMVDFGGWEMPVQY----------------------GSiieEHHAVRTDAGLFDVSHMGEVDVTGPDALA 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 550 LLDHLFANVIPK--VGFTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAvkGGYDVEIKNITDEL 627
Cdd:PRK00389 65 FLQYLLANDVSKlkPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVVNAANREKDLAWIKSHA--AGFGVEVTDRSDDL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 628 GVLGVAGPQARKVLQKLTSEDLSD-DVFKFLQTKSLKVSNIpvtaiRIS---YTGELGWELYHRREDSVALYDAIMNAGq 703
Cdd:PRK00389 143 AMIAVQGPKAREKLQKLTDADLSElKPFFGAQGAEVGGGDV-----LVArtgYTGEDGFEIYLPAEDAEALWDALLEAG- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 704 eegIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLaTDDVD 783
Cdd:PRK00389 217 ---VKPCGLGARDTLRLEAGMPLYGQDMDETITPLEAGLGWTVKLEEKRDFIGREALEAQKEAGVERKLVGLEL-EERGI 292
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24797151 784 PEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPvqlSEVGQQVEVELLGKNYPAVIIQEPLV 848
Cdd:PRK00389 293 PRHGYPVLADGEEIGEVTSGTFSPTLGKSIALAYVP---AGVGDEVEVEIRGKQVPAKVVKPPFV 354
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
53-414 |
4.81e-63 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 216.11 E-value: 4.81e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGMkDVVLLEK-SELTAGSTWHAAGLttyFHPGI------NLKKIHYDSIKLYEKLEEETGQ 125
Cdd:pfam01266 3 VVIGGGIVGLSTAYELARRGL-SVTLLERgDDPGSGASGRNAGL---IHPGLrylepsELARLALEALDLWEELEEELGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 126 VVGFHQPGSIRLATTPV--RVDEFKYQMTRTGWHAteqYLIEPEKIQEMFPLLnmNKVLAGLYNPGDGHIDPYSLTMALA 203
Cdd:pfam01266 79 DCGFRRCGVLVLARDEEeeALEKLLAALRRLGVPA---ELLDAEELRELEPLL--PGLRGGLFYPDGGHVDPARLLRALA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 204 AGARKCGALLKYPAPVTSLKaRSDGTWDVETPqGSMRAnrIVNAAGFWAREVGkMIGLEHPLIPVQHQYVVTSTISEvKA 283
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTGIE-EEGGVWGVVTT-GEADA--VVNAAGAWADLLA-LPGLRLPVRPVRGQVLVLEPLPE-AL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 284 LKRELPVLRDLEGSYYLRQERDG-LLFGPYEsqekmkvqdswvtngvpPGFGKELFESDLDRIMEHIKAAMEMVPVLkkA 362
Cdd:pfam01266 228 LILPVPITVDPGRGVYLRPRADGrLLLGGTD-----------------EEDGFDDPTPDPEEIEELLEAARRLFPAL--A 288
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 24797151 363 DIINVVNGPITYsPDILPMVGPHqGVRNYWVAIGF-GYGIIHAGGVGKYLSDW 414
Cdd:pfam01266 289 DIERAWAGLRPL-PDGLPIIGRP-GSPGLYLATGHgGHGLTLAPGIGKLLAEL 339
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
48-365 |
4.78e-33 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 132.58 E-value: 4.78e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 48 DRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEK-SELTAGSTWHAAGLttyFHPGINLKKihyDSIK---------LYE 117
Cdd:COG0579 3 EMYDVVIIGAGIVGLALARELSRYEDLKVLVLEKeDDVAQESSGNNSGV---IHAGLYYTP---GSLKarlcvegneLFY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 118 KLEEETGqvVGFHQPGSIRLATTPvrvDEFKY------QMTRTGWHATEqyLIEPEKIQEMFPLLNmNKVLAGLYNPGDG 191
Cdd:COG0579 77 ELCRELG--IPFKRCGKLVVATGE---EEVAFleklyeRGKANGVPGLE--ILDREELRELEPLLS-DEGVAALYSPSTG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 192 HIDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDGtWDVETPQGSMRANRIVNAAGFWAREVGKMIGLEHP--LIPVQ 269
Cdd:COG0579 149 IVDPGALTRALAENAEANGVELLLNTEVTGIEREGDG-WEVTTNGGTIRARFVINAAGLYADRLAQMAGIGKDfgIFPVK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 270 HQYVVTS-TISEVKAL-----KRELP-----VLRDLEGSyylrqerdgLLFGPYeSQEKMKVQDSW---VTNGVPPGFGK 335
Cdd:COG0579 228 GEYLVLDkPAELVNAKvypvpDPGAPflgvhLTRTIDGN---------LLFGPN-AVFVPKKEDSLldlFESLRFPNFWP 297
|
330 340 350
....*....|....*....|....*....|....*....
gi 24797151 336 ELFESDLDRIMEH---------IKAAMEMVPVLKKADII 365
Cdd:COG0579 298 MLAKNLLTKYLESvtslskeafLEALRKYVPELPDEDLI 336
|
|
| PLN02319 |
PLN02319 |
aminomethyltransferase |
488-854 |
2.98e-32 |
|
aminomethyltransferase
Pssm-ID: 177953 [Multi-domain] Cd Length: 404 Bit Score: 130.23 E-value: 2.98e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 488 AGWEQPhwfykpgqdTQYRPS-FRRTNWFEPVGSEYkqvmqrvavtDLSPFGKFNIKGQDSIRLLDHLFANVIP--KVGF 564
Cdd:PLN02319 52 AGWSMP---------IQYKDSiMDSTLNCRQNGSLF----------DVSHMCGLSLKGKDAIPFLETLVVADIAglKDGT 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 565 TNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEE--EAVKG-GYDVEIkNITDELGVLGVAGPQARKVL 641
Cdd:PLN02319 113 GTLSVFTNEKGGIIDDTVITKVTDDHIYLVVNAGCRDKDLAHIEEhmKAFKAkGGDVSW-HVHDERSLLALQGPLAAPVL 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 642 QKLTSEDLSDdvFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMnAGQEEGIDNFGTYAMNALRLE 721
Cdd:PLN02319 192 QHLTKEDLSK--MYFGDFRITDINGADCFLTRTGYTGEDGFEISVPSEHAVDLAKALL-EKSEGKVRLTGLGARDSLRLE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 722 KAFRAWGLEMNCDTNPLEAGLEYFVKLNKPA--DFIGKQALKQIKAKGLKRRLVCLTlATDDVDPEGNESIWYNGKVVGN 799
Cdd:PLN02319 269 AGLCLYGNDLEEHITPVEAGLAWTIGKRRRAegGFLGADVILKQLKEGVSRRRVGFI-SSGAPARSHSEILDESGEKIGE 347
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 24797151 800 TTSGSYSYSIQKSLAFAYVPVQLSEVGQQVEVELLGKNYPAVIIQEPLVltePTR 854
Cdd:PLN02319 348 VTSGGFSPCLKKNIAMGYVKSGFHKAGTEVKVEVRGKMYDAVVTKMPFV---PTK 399
|
|
| GCV_T_C |
pfam08669 |
Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage ... |
770-848 |
1.04e-25 |
|
Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 462554 [Multi-domain] Cd Length: 80 Bit Score: 101.01 E-value: 1.04e-25
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24797151 770 RRLVCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVGQQVEVELLGKNYPAVIIQEPLV 848
Cdd:pfam08669 1 RRLVGLELDDGDPLLRGGEPVLRDGEVVGYVTSGAYSPTLGKSIALAYVDAELAKPGTEVEVEIRGKRVPATVVKLPFY 79
|
|
| gcvT |
PRK13579 |
glycine cleavage system aminomethyltransferase GcvT; |
533-848 |
4.79e-20 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 237435 [Multi-domain] Cd Length: 370 Bit Score: 93.09 E-value: 4.79e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 533 DLSPFGKFNIKGQDSIRLLDHLFAN--VIPKVGFTNISHMLTPKGRVYAELTVSHQSpGEFLLITGSGSELHDLRWIEEE 610
Cdd:PRK13579 56 DVSHMGQIEVSGKDAAAALERLVPVdiLALKEGRQRYTFFTNEQGGILDDLMVTNLG-DHLFLVVNAACKDADIAHLREH 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 611 AVKggyDVEIKNITDElGVLGVAGPQARKVLQKLTSeDLSDdvFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRRED 690
Cdd:PRK13579 135 LSD---ECEVNPLDDR-ALLALQGPEAEAVLADLGP-PVAA--LRFMDGFEPRLHGVDCFVSRSGYTGEDGFEISVPADA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 691 SVALYDAIMNAGQEEGIdnfGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNK--PADFIGKQALKQIKAKGL 768
Cdd:PRK13579 208 AEALAEALLADPRVEPI---GLGARDSLRLEAGLCLYGHDIDTTTTPVEAALEWAIQKARreAGGFPGAKAILAALAKGA 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 769 KRRLVCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVGQQVEVELLGKNYPAVIIQEPLV 848
Cdd:PRK13579 285 SRRRVGLKPEGRAPVREGAPLFDDAGTEIGTVTSGGFGPSVGGPVAMGYVPASLAAPGTAVFAEVRGKRLPVTVHALPFV 364
|
|
| dmdA |
PRK12486 |
dimethylsulfoniopropionate demethylase; |
515-832 |
1.34e-19 |
|
dimethylsulfoniopropionate demethylase;
Pssm-ID: 237113 [Multi-domain] Cd Length: 368 Bit Score: 91.74 E-value: 1.34e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 515 FEPVGSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLdhlfanvipkvgftnisHMLTPK-------GRVYAELTVSHQS 587
Cdd:PRK12486 40 FESVEDDYAHLKEHVQVWDVAVERQVEIRGPDAARLV-----------------QMLTPRdlrgmkpGQCYYVPIVDETG 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 588 -----PGEFLL------ITGSGSELhdLRWIEEEAVKGGYDVEIknitDELGV--LGVAGPQARKVLQKLTSEDLSDdvF 654
Cdd:PRK12486 103 gmlndPVALKLaedrwwISIADSDL--LLWVKGLANGRKLDVLV----VEPDVspLAVQGPKADALMARVFGEAIRD--L 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 655 KFLQTKSLKVSNIPVTAIRISYTGELGWELY-HRREDSVALYDAIMNAGQEEgidNFGTYAMNAL-RLEKAFRAWGLEMN 732
Cdd:PRK12486 175 RFFRFGYFDFEGTDLVIARSGYSKQGGFEIYvEGSDLGMPLWDALFEAGKDL---NVRAGCPNLIeRIEGGLLSYGNDMT 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 733 CDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWY-NGKVVGNTTSGSYSYSIQK 811
Cdd:PRK12486 252 RDNTPHECGLGRFCNTQTDIGCIGKDALLRVAKEGPQKQIRGIKIGGERIPPCDRAWPLLaGDNRVGQVTSAAYSPDFQT 331
|
330 340
....*....|....*....|.
gi 24797151 812 SLAFAYVPVQLSEVGQQVEVE 832
Cdd:PRK12486 332 NVAIGMVRMTHWDPGTGLEVE 352
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
417-472 |
7.97e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.10 E-value: 7.97e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 24797151 417 HGEPPFDLIELDPNRYGK-WTTTQYTEAKARESYGFNNIVGYPKEERFAGRPtQRVS 472
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPhQNNREYLRERVAENYGEVYDIHHPNEEREAGRP-LRTS 56
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
51-434 |
1.67e-11 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 66.78 E-value: 1.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 51 ETVIIGGGCVGVSLAYHLAKAGMKdVVLLEKSEL--TAGS------TWHAAGLTTYFHPginlkkIHYDSIKLYEKLEEE 122
Cdd:TIGR01377 2 DVIVVGAGIMGCFAAYHLAKHGKK-TLLLEQFDLphSRGSshgqsrIIRKAYPEDFYTP------MMLECYQLWAQLEKE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 123 TGQVVgFHQPGSIRLAttPVRVDEFKYQMTRTGWHATEQYLIEPEKIQEMFPLLNMNKVLAGLYNPGDGHIDPYSLTMAL 202
Cdd:TIGR01377 75 AGTKL-HRQTGLLLLG--PKENQFLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRAL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 203 AAGARKCGALLKYPAPVTSLKaRSDGTWDVETPQGSMRANRIVNAAGFWAREVGKMIGLEHPLIPVQhQYVVTSTISEVK 282
Cdd:TIGR01377 152 QELAEAHGATVRDGTKVVEIE-PTELLVTVKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIPLQPLR-INVCYWREKEPG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 283 ALK--RELPVL--RDLEGSYYlrqerdGLLFGPYESQEKMKVQ-DSWV---TNGVPPGFGKElfesDLDRIMEHIKAAM- 353
Cdd:TIGR01377 230 SYGvsQAFPCFlvLGLNPHIY------GLPSFEYPGLMKVYYHhGQQIdpdERDCPFGADIE----DVQILRKFVRDHLp 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 354 EMVPVLKKADIINVVNgpitySPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY 432
Cdd:TIGR01377 300 GLNGEPKKGEVCMYTN-----TPDEHFVIDLHPKYDNVVIGAGFsGHGFKLAPVVGKILAELAMKLKPSYDLAIFSLNRF 374
|
..
gi 24797151 433 GK 434
Cdd:TIGR01377 375 AL 376
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
53-431 |
4.06e-11 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 65.63 E-value: 4.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGmKDVVLLEKSEL--TAGS-------TWHAaglttYF-HPGinlkkihY-----DSIKLYE 117
Cdd:PRK11259 7 IVIGLGSMGSAAGYYLARRG-LRVLGLDRFMPphQQGSshgdtriIRHA-----YGeGPA-------YvplvlRAQELWR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 118 KLEEETGQVVgFHQPGSIRLAttpVRVDEFkyqmTRTGWHATEQY-----LIEPEKIQEMFPLLNMNKVLAGLYNPGDGH 192
Cdd:PRK11259 74 ELERESGEPL-FVRTGVLNLG---PADSDF----LANSIRSARQHglpheVLDAAEIRRRFPQFRLPDGYIALFEPDGGF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 193 IDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDGTwDVETPQGSMRANRIVNAAGFWAREvgkMIG-LEHPLIP---V 268
Cdd:PRK11259 146 LRPELAIKAHLRLAREAGAELLFNEPVTAIEADGDGV-TVTTADGTYEAKKLVVSAGAWVKD---LLPpLELPLTPvrqV 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 269 QHQYVVTSTISEvkalKRELPVlrdlegsyYLRQERDGLLF-G-PYESQEKMKVqdswvtngvppgfGKELF------ES 340
Cdd:PRK11259 222 LAWFQADGRYSE----PNRFPA--------FIWEVPDGDQYyGfPAENGPGLKI-------------GKHNGgqeitsPD 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 341 DLDRIMEHIKAAMEMVPVLKK--ADIINVVNGPI---TYSPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDW 414
Cdd:PRK11259 277 ERDRFVTVAEDGAELRPFLRNylPGVGPCLRGAActyTNTPDEHFIIDTLPGHPNVLVASGCsGHGFKFASVLGEILADL 356
|
410
....*....|....*..
gi 24797151 415 ILHGEPPFDLIELDPNR 431
Cdd:PRK11259 357 AQDGTSDFDLSPFSLSR 373
|
|
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
53-262 |
1.36e-09 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 60.99 E-value: 1.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 53 VIIGGGCVGVSLAYHLAKA--GMKdVVLLEK-SELTAGSTWHA-----AGLttYFHPGiNLK------------------ 106
Cdd:PRK11728 6 VIIGGGIVGLSTAMQLQERypGAR-IAVLEKeSGPARHQTGHNsgvihAGV--YYTPG-SLKarfcrrgneatkafcdqh 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 107 KIHYdsiklyekleEETGQVVgfhqpgsirLATTPVRVDEFK--YQMTRTgwHATEQYLIEPEKIQEMFPllNMNKvLAG 184
Cdd:PRK11728 82 GIPY----------EECGKLL---------VATSELELERMEalYERARA--NGIEVERLDAEELREREP--NIRG-LGA 137
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24797151 185 LYNPGDGHIDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDGTwDVETPQGSMRANRIVNAAGFWAREVGKMIGLE 262
Cdd:PRK11728 138 IFVPSTGIVDYRAVAEAMAELIQARGGEIRLGAEVTALDEHANGV-VVRTTQGEYEARTLINCAGLMSDRLAKMAGLE 214
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
35-432 |
1.83e-06 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 51.77 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 35 EEKPPLSAETQWKDRA------ETVIIGGGCVGVSLAYHLAKAGmKDVVLLEK-SELTAGSTWHAAGLttyFHPGINLKK 107
Cdd:PRK01747 240 EQTLPAPLAAPWFARPgspkarDAAIIGGGIAGAALALALARRG-WQVTLYEAdEAPAQGASGNRQGA---LYPLLSKDD 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 108 -----------IHydSIKLYEKLEEEtGQVVGFHQPGSIRLATTPVRVDEFKyQMTRTGWHATeqyLIEPEKIQEMFPLL 176
Cdd:PRK01747 316 nalsrffraafLF--ARRFYDALPAA-GVAFDHDWCGVLQLAWDEKSAEKIA-KMLALGLPAE---LARALDAEEAEELA 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 177 NMNKVLAGLYNPGDGHIDPYSLTMALAAGArKCGALLKYPAPVTSLkARSDGTWDVETPQGSMRANRIVNAAGfwAREVG 256
Cdd:PRK01747 389 GLPVPCGGIFYPQGGWLCPAELCRALLALA-GQQLTIHFGHEVARL-EREDDGWQLDFAGGTLASAPVVVLAN--GHDAA 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 257 KMIGLEH-PLIPVQHQyvVTS--TISEVKALKREL-------PVLRD---LEGSYYLRQERDgLLFGPYESQEkmkvqds 323
Cdd:PRK01747 465 RFAQTAHlPLYSVRGQ--VSHlpTTPALSALKQVLcydgyltPQPANgthCIGASYDRDDTD-TAFREADHQE------- 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 324 wvtngvppgfgkelfesDLDRImehikaaMEMVPVLKKADIINVVN-----GPITYSPDILPMVGP----HQGVRNY--- 391
Cdd:PRK01747 535 -----------------NLERL-------AECLPQALWAKEVDVSAlqgrvGFRCASRDRLPMVGNvpdeAATLAEYaal 590
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24797151 392 ---------------WVAIGFG-YGIIHAGGVGKYLSDWILhGEP---PFDLIE-LDPNRY 432
Cdd:PRK01747 591 anqqpardaprlpglYVAGALGsRGLCSAPLGAELLASQIE-GEPlplERDLLAaLHPNRF 650
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
53-432 |
1.97e-06 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 50.95 E-value: 1.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGMKDVVL-------LEKSELTAG-------STWHAaglttyfhPGINLKKI---------- 108
Cdd:PRK00711 4 VVLGSGVIGVTSAWYLAQAGHEVTVIdrqpgpaLETSFANAGqispgyaAPWAA--------PGVPLKAIkwlfqrhapl 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 109 ------------------------HYDSIK------------LYEKLEEETGQVVGFHQPGSIRLATTPVRVD----EFK 148
Cdd:PRK00711 76 airpdgdpfqlrwmwqmlrnctasRYAVNKsrmvrlaeysrdCLKALRAETGIQYEGRQGGTLQLFRTQQQLDaaakDIA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 149 YQmTRTGwhaTEQYLIEPEKIQEMFPLLN--MNKVLAGLYNPGDGHIDPYSLTMALAAGARKCGALLKYPAPVTSLKARS 226
Cdd:PRK00711 156 VL-EEAG---VPYELLDRDELAAVEPALAgvRHKLVGGLRLPNDETGDCQLFTQRLAAMAEQLGVKFRFNTPVDGLLVEG 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 227 DGTWDVETPQGSMRANRIVNAAGFWAREVGKMIGLEHPLIPVQhQYVVT-----------STI--SEVK-ALKRELPVLR 292
Cdd:PRK00711 232 GRITGVQTGGGVITADAYVVALGSYSTALLKPLGVDIPVYPLK-GYSLTvpitdedrapvSTVldETYKiAITRFDDRIR 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 293 -----DLEG-SYYLRQERDGLLfgpyesqeKMKVQDswvtngvppgfgkeLFESDLDrimehikaamemvpvLKKADIIn 366
Cdd:PRK00711 311 vggmaEIVGfDLRLDPARRETL--------EMVVRD--------------LFPGGGD---------------LSQATFW- 352
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24797151 367 vvNG--PITysPDILPMVGPHQgVRNYWVAIGFG-YGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY 432
Cdd:PRK00711 353 --TGlrPMT--PDGTPIVGATR-YKNLWLNTGHGtLGWTMACGSGQLLADLISGRKPAIDADDLSVARY 416
|
|
| SoxG |
COG4583 |
Sarcosine oxidase gamma subunit [Amino acid transport and metabolism]; |
587-704 |
2.48e-06 |
|
Sarcosine oxidase gamma subunit [Amino acid transport and metabolism];
Pssm-ID: 443640 Cd Length: 169 Bit Score: 48.32 E-value: 2.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 587 SPGEFLLItGSGSELHDLRWIEEEAVKGGY----DVeikniTDELGVLGVAGPQARKVLQKLTSEDLSDDVFK---FLQT 659
Cdd:COG4583 54 GPDEWLLL-APYGAAEDLAAALAAALAGLHaavvDV-----SDGRTVFELSGPRARDVLAKLCPLDLHPRAFPvgaAART 127
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 24797151 660 kslKVSNIPVTAIRisyTGELGWELYHRRedSVA--LYDAIMNAGQE 704
Cdd:COG4583 128 ---VLAHVGVVLWR---TGEDRFRLLVRR--SFAdyLWHWLEDAARE 166
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
46-94 |
2.24e-05 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 47.79 E-value: 2.24e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 24797151 46 WKDRAETVIIGGGCVGVSLAYHLAKAGmkDVVLLEKSELTAGSTWHAAG 94
Cdd:COG0029 1 ERLKTDVLVIGSGIAGLSAALKLAERG--RVTLLTKGELGESNTRWAQG 47
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
51-91 |
5.37e-05 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 46.39 E-value: 5.37e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 24797151 51 ETVIIGGGCVGVSLAYHLAKAGMkDVVLLEKSElTAGSTWH 91
Cdd:COG2072 8 DVVVIGAGQAGLAAAYHLRRAGI-DFVVLEKAD-DVGGTWR 46
|
|
| GlpA |
COG0578 |
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate ... |
166-264 |
1.08e-04 |
|
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate dehydrogenase is part of the Pathway/BioSystem: Isoprenoid biosynthesis
Pssm-ID: 440343 [Multi-domain] Cd Length: 501 Bit Score: 45.89 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 166 PEKIQEMFPLLNMNKVLAG-LYnpGDGHIDPYSLTMALAAGARKCGAL-LKYpAPVTSLKARSDGTW-----DVET-PQG 237
Cdd:COG0578 107 RAEALALAPLLRPDGLRGGfEY--YDAQVDDARLVLELARTAAERGAVvLNY-TRVTGLLRDGGRVWgvtvrDRLTgEEF 183
|
90 100
....*....|....*....|....*..
gi 24797151 238 SMRANRIVNAAGFWAREVGKMIGLEHP 264
Cdd:COG0578 184 TVRARVVVNATGPWVDELRALDGPKAP 210
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
160-260 |
1.91e-04 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 44.63 E-value: 1.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 160 EQYLIEPEKIQEMFPLLNmNKVLAGLYNPGDGHIDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDG-----TWDVET 234
Cdd:PRK12409 162 ERRAVTPEEMRAIEPTLT-GEYYGGYYTPSDSTGDIHKFTTGLAAACARLGVQFRYGQEVTSIKTDGGGvvltvQPSAEH 240
|
90 100
....*....|....*....|....*.
gi 24797151 235 PQGSMRANRIVNAAGFWAREVGKMIG 260
Cdd:PRK12409 241 PSRTLEFDGVVVCAGVGSRALAAMLG 266
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
52-84 |
6.83e-04 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 42.69 E-value: 6.83e-04
10 20 30
....*....|....*....|....*....|...
gi 24797151 52 TVIIGGGCVGVSLAYHLAKAGMkDVVLLEKSEL 84
Cdd:TIGR02032 3 VVVVGAGPAGASAAYRLADKGL-RVLLLEKKSF 34
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
53-100 |
8.33e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 42.95 E-value: 8.33e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGmKDVVLLEKSELTAG--STWHAAGLT--TYFH 100
Cdd:PRK07233 3 AIVGGGIAGLAAAYRLAKRG-HEVTVFEADDQLGGlaASFEFGGLPieRFYH 53
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
53-295 |
8.79e-04 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 42.23 E-value: 8.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGMkDVVLLEKSELTAgstWHAAGLTtyfhpginlkkIHYDSIKLYEKLeeetgqvvGFHQp 132
Cdd:COG0654 7 LIVGGGPAGLALALALARAGI-RVTVVERAPPPR---PDGRGIA-----------LSPRSLELLRRL--------GLWD- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 133 gsiRLATTPVRVDEFKYQMTRTGWHATEqyliepekiqemFPllnmnkvLAGLYNPGDGHIDPYSLTMALAAGARKCGAL 212
Cdd:COG0654 63 ---RLLARGAPIRGIRVRDGSDGRVLAR------------FD-------AAETGLPAGLVVPRADLERALLEAARALGVE 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24797151 213 LKYPAPVTSLKARSDGtWDVETPQGS-MRANRIVNAAGFWAReVGKMIGLEHPLIPVQHQYVVTSTISEVKA-LKRELPV 290
Cdd:COG0654 121 LRFGTEVTGLEQDADG-VTVTLADGRtLRADLVVGADGARSA-VRRLLGIGFTGRDYPQRALWAGVRTELRArLAAAGPR 198
|
....*
gi 24797151 291 LRDLE 295
Cdd:COG0654 199 LGELL 203
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
49-83 |
8.91e-04 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 42.51 E-value: 8.91e-04
10 20 30
....*....|....*....|....*....|....*
gi 24797151 49 RAETVIIGGGCVGVSLAYHLAKAGMkDVVLLEKSE 83
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGH-EVTVLEASD 34
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
54-101 |
3.85e-03 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 36.74 E-value: 3.85e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 24797151 54 IIGGGCVGVSLAYHLAKAGmKDVVLLEKSELTAG--STWHAAGLT-----TYFHP 101
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRG-FRVLVLEKRDRLGGnaYSYRVPGYVfdygaHIFHG 54
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
53-94 |
9.96e-03 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 39.43 E-value: 9.96e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 24797151 53 VIIGGGCVGVSLAYHLAKAGMKdVVLLEKSELTAGSTWHAAG 94
Cdd:COG1053 7 VVVGSGGAGLRAALEAAEAGLK-VLVLEKVPPRGGHTAAAQG 47
|
|
| |
