|
Name |
Accession |
Description |
Interval |
E-value |
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
7-532 |
4.40e-21 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 96.98 E-value: 4.40e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 7 LKEKGNKALSAGNIDDALQCYSEAIKLDPqNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN 86
Cdd:TIGR00990 130 LKEKGNKAYRNKDFNKAIKLYSKAIECKP-DPVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRANAYDGLG 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 87 RFEEA------------------KRTYEEGLKHEANNlQLKEGLQNMEARLAERKFMNpfnlpNLYQKLENDPRTRSLLS 148
Cdd:TIGR00990 209 KYADAlldltasciidgfrneqsAQAVERLLKKFAES-KAKEILETKPENLPSVTFVG-----NYLQSFRPKPRPAGLED 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 149 DptyRELIEQLQNKPSDLGTKLQDPRVMTTLSvllgvdlgsmdeeeeaatpppppPPKKEPKPEPMEEDLPEnkKQALKE 228
Cdd:TIGR00990 283 S---NELDEETGNGQLQLGLKSPESKADESYE-----------------------EAARAFEKALDLGKLGE--KEAIAL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 229 KELGNDAYKKKDFDKALKHYDRAKELDP-TNMTYItNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYrqiakaYARiG 307
Cdd:TIGR00990 335 NLRGTFKCLKGKHLEALADLSKSIELDPrVTQSYI-KRASMNLELGDPDKAEEDFDKALKLNSEDPDIY------YHR-A 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 308 NSYFKEEKYKDAIHFYNKSLAehrtpdvlkkcqqaekilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHYTEAI 387
Cdd:TIGR00990 407 QLHFIKGEFAQAGKDYQKSID--------------------------LDPDFIFSHIQLGVTQYKEGSIASSMATFRRCK 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 388 KRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF------IKGYTRKAAAL-EAMKDYTKAMDVYQKALDLDSS 460
Cdd:TIGR00990 461 KNFPEAPDVYNYYGELLLDQNKFDEAIEKFDTAIELEKETkpmymnVLPLINKALALfQWKQDFIEAENLCEKALIIDPE 540
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14389431 461 CKEAADGYQRCMMAQYNRHDSPEDVKRRAmadpEVQQIMSDPAMRLILEQMQKDPQALSEhlKNPVIAQKIQ 532
Cdd:TIGR00990 541 CDIAVATMAQLLLQQGDVDEALKLFERAA----ELARTEGELVQAISYAEATRTQIQVQE--DYPVLASKLQ 606
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
253-522 |
6.37e-21 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 91.99 E-value: 6.37e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 253 ELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNSYFKEEKYKDAIHFYNKSLAehrt 332
Cdd:COG0457 2 ELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDD-------AEALYNLGLAYLRLGRYEEALADYEQALE---- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 333 pdvlkkcqqaekilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQL 412
Cdd:COG0457 71 ----------------------LDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDE 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 413 ALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSScKEAADGYQRCMMAQYNRHDSPEDVKRRAMAD 492
Cdd:COG0457 129 AIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALA-ALLAAALGEAALALAAAEVLLALLLALEQAL 207
|
250 260 270
....*....|....*....|....*....|
gi 14389431 493 PEVQQIMSDPAMRLILEQMQKDPQALSEHL 522
Cdd:COG0457 208 RKKLAILTLAALAELLLLALALLLALRLAA 237
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
225-514 |
9.07e-20 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 89.40 E-value: 9.07e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 225 ALKEKELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYnkcrelcEKAIEVGRENREDYRQIAKAYA 304
Cdd:COG2956 8 ALGWYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEY-------DRAIRIHQKLLERDPDRAEALL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 305 RIGNSYFKEEKYKDAIHFYNKSLAEH-RTPDVLKKC-------QQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDY 376
Cdd:COG2956 81 ELAQDYLKAGLLDRAEELLEKLLELDpDDAEALRLLaeiyeqeGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 377 PQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALD 456
Cdd:COG2956 161 DEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALE 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 14389431 457 LDssckeaadgyqrcmmaqynrhdsPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKD 514
Cdd:COG2956 241 LD-----------------------PSDDLLLALADLLERKEGLEAALALLERQLRRH 275
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
231-470 |
1.55e-19 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 88.14 E-value: 1.55e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 231 LGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNSY 310
Cdd:COG0457 14 LGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDD-------AEALNNLGLAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 311 FKEEKYKDAIHFYNKSLAehrtpdvlkkcqqaekilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRN 390
Cdd:COG0457 87 QALGRYEEALEDYDKALE--------------------------LDPDDAEALYNLGLALLELGRYDEAIEAYERALELD 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 391 PRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470
Cdd:COG0457 141 PDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALA 220
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
289-475 |
2.36e-19 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 91.59 E-value: 2.36e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 289 GRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKNKGN 368
Cdd:COG3914 41 LGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGN 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 369 ECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAM 448
Cdd:COG3914 121 LLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAI 200
|
170 180
....*....|....*....|....*..
gi 14389431 449 DVYQKALDLDSSCKEAADGYQRCMMAQ 475
Cdd:COG3914 201 AAYRRALELDPDNADAHSNLLFALRQA 227
|
|
| STI1 |
pfam17830 |
STI1 domain; This entry corresponds to the STI1 domain that is found in two copies in the Sti1 ... |
482-536 |
9.82e-18 |
|
STI1 domain; This entry corresponds to the STI1 domain that is found in two copies in the Sti1 protein.
Pssm-ID: 436075 Cd Length: 55 Bit Score: 76.83 E-value: 9.82e-18
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 14389431 482 PEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMD 536
Cdd:pfam17830 1 DPELLAKLAANPETRALLSDPEFVAKLQQIQKNPSSLQQYMQDPRVMTKLGVLMG 55
|
|
| STI1 |
pfam17830 |
STI1 domain; This entry corresponds to the STI1 domain that is found in two copies in the Sti1 ... |
131-184 |
2.90e-17 |
|
STI1 domain; This entry corresponds to the STI1 domain that is found in two copies in the Sti1 protein.
Pssm-ID: 436075 Cd Length: 55 Bit Score: 75.67 E-value: 2.90e-17
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 14389431 131 PNLYQKLENDPRTRSLLSDPTYRELIEQLQNKPSDLGTKLQDPRVMTTLSVLLG 184
Cdd:pfam17830 2 PELLAKLAANPETRALLSDPEFVAKLQQIQKNPSSLQQYMQDPRVMTKLGVLMG 55
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
295-465 |
1.41e-15 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 76.11 E-value: 1.41e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 295 DYRQIAKAYARIGNSYFKEEKY-------KDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKNKG 367
Cdd:COG4785 1 LYALALALLLALALAAAAASKAaillaalLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 368 NECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKA 447
Cdd:COG4785 81 VAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELA 160
|
170
....*....|....*...
gi 14389431 448 MDVYQKALDLDSSCKEAA 465
Cdd:COG4785 161 IADLEKALELDPNDPERA 178
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
265-489 |
5.71e-14 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 74.64 E-value: 5.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 265 QAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNSYFKEEKYKDAIHFYNKSLAehrtpdvlkkcqqaek 344
Cdd:COG3914 84 AALLLQALGRYEEALALYRRALALNPDN-------AEALFNLGNLLLALGRLEEALAALRRALA---------------- 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 345 ilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLE 424
Cdd:COG3914 141 ----------LNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELD 210
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14389431 425 PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAAdgyqrCMMAQYNRHDSPEDVKRRA 489
Cdd:COG3914 211 PDNADAHSNLLFALRQACDWEVYDRFEELLAALARGPSELS-----PFALLYLPDDDPAELLALA 270
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
224-424 |
4.93e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 71.56 E-value: 4.93e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 224 QALKEKELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAY 303
Cdd:COG3914 77 LAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDF-------AEAY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 304 ARIGNSYFKEEKYKDAIHFYNKSLAehrtpdvlkkcqqaekilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHY 383
Cdd:COG3914 150 LNLGEALRRLGRLEEAIAALRRALE--------------------------LDPDNAEALNNLGNALQDLGRLEEAIAAY 203
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 14389431 384 TEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLE 424
Cdd:COG3914 204 RRALELDPDNADAHSNLLFALRQACDWEVYDRFEELLAALA 244
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
1-108 |
8.18e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 71.18 E-value: 8.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 1 MEQVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80
Cdd:COG3914 75 LLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGE 154
|
90 100
....*....|....*....|....*...
gi 14389431 81 ALEFLNRFEEAKRTYEEGLKHEANNLQL 108
Cdd:COG3914 155 ALRRLGRLEEAIAALRRALELDPDNAEA 182
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
220-459 |
1.20e-12 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 70.40 E-value: 1.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 220 ENKKQALKEKELGNDAYKKKDFDKALKHYDRAKELDPtNMTYITNQAAVHFEKGDYNKCRELCEKAIEVgrenREDYrqi 299
Cdd:TIGR00990 122 ERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKP-DPVYYSNRAACHNALGDWEKVVEDTTAALEL----DPDY--- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 300 AKAYARIGNSYFKEEKYKDA---------IHFYNKSLAEHRTPDVLKKcqQAEKILKE-----QERLAYIN--------- 356
Cdd:TIGR00990 194 SKALNRRANAYDGLGKYADAlldltasciIDGFRNEQSAQAVERLLKK--FAESKAKEiletkPENLPSVTfvgnylqsf 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 357 ---PDLA-LEEKNKGNECFQKGDYPQAMKH--------YTEAI----------KRNPRDAKLYSNRAACYTKLLEFQLAL 414
Cdd:TIGR00990 272 rpkPRPAgLEDSNELDEETGNGQLQLGLKSpeskadesYEEAArafekaldlgKLGEKEAIALNLRGTFKCLKGKHLEAL 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 14389431 415 KDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDS 459
Cdd:TIGR00990 352 ADLSKSIELDPRVTQSYIKRASMNLELGDPDKAEEDFDKALKLNS 396
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
9-336 |
1.01e-11 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 65.52 E-value: 1.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 9 EKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRF 88
Cdd:COG2956 13 FKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 89 EEAKRTYEEGLKHEANNLQLKEglqnmearlaerkfmnpfNLPNLYQKLENdprtrsllsdptYRELIEQLQnkpsdlgt 168
Cdd:COG2956 93 DRAEELLEKLLELDPDDAEALR------------------LLAEIYEQEGD------------WEKAIEVLE-------- 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 169 KLQDprvmttlsvllgvdlgsmdeeeeaatpppppppkkepkpepmeedlpENKKQALKEKELGNDAYKKKDFDKALKHY 248
Cdd:COG2956 135 RLLK-----------------------------------------------LGPENAHAYCELAELYLEQGDYDEAIEAL 167
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 249 DRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNsyfkeekYKDAIHFYNKSLA 328
Cdd:COG2956 168 EKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGD-------PEEALELLRKALE 240
|
....*...
gi 14389431 329 EHRTPDVL 336
Cdd:COG2956 241 LDPSDDLL 248
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
5-121 |
3.32e-11 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 64.81 E-value: 3.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 5 NELKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF 84
Cdd:PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMK 82
|
90 100 110
....*....|....*....|....*....|....*..
gi 14389431 85 LNRFEEAKRTYEEGLKHEANNLQLKEGLQNMEARLAE 121
Cdd:PLN03088 83 LEEYQTAKAALEKGASLAPGDSRFTKLIKECDEKIAE 119
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
10-105 |
4.70e-11 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 63.10 E-value: 4.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 10 KGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFE 89
Cdd:COG0457 14 LGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYE 93
|
90
....*....|....*.
gi 14389431 90 EAKRTYEEGLKHEANN 105
Cdd:COG0457 94 EALEDYDKALELDPDD 109
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
7-100 |
6.00e-11 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 62.24 E-value: 6.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN 86
Cdd:COG4785 76 YYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLG 155
|
90
....*....|....
gi 14389431 87 RFEEAKRTYEEGLK 100
Cdd:COG4785 156 RYELAIADLEKALE 169
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
360-494 |
1.34e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 59.44 E-value: 1.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 360 ALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 439
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALL 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 14389431 440 AMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRAMADPE 494
Cdd:COG4783 84 KAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
7-123 |
2.63e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 60.79 E-value: 2.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN 86
Cdd:COG0457 79 LNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLG 158
|
90 100 110
....*....|....*....|....*....|....*..
gi 14389431 87 RFEEAKRTYEEGLKHEANNLQLKEGLQNMEARLAERK 123
Cdd:COG0457 159 RYEEALELLEKLEAAALAALLAAALGEAALALAAAEV 195
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
366-460 |
5.54e-10 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 60.96 E-value: 5.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 366 KGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYT 445
Cdd:PLN03088 8 KAKEAFVDDDFALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLEEYQ 87
|
90
....*....|....*
gi 14389431 446 KAMDVYQKALDLDSS 460
Cdd:PLN03088 88 TAKAALEKGASLAPG 102
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
15-123 |
6.67e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 59.64 E-value: 6.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 15 LSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRT 94
Cdd:COG0457 53 LRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEA 132
|
90 100
....*....|....*....|....*....
gi 14389431 95 YEEGLKHEANNLQLKEGLQNMEARLAERK 123
Cdd:COG0457 133 YERALELDPDDADALYNLGIALEKLGRYE 161
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
371-458 |
1.12e-09 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 56.55 E-value: 1.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 371 FQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDV 450
Cdd:COG4235 28 LRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQGDYAEAIAA 107
|
....*...
gi 14389431 451 YQKALDLD 458
Cdd:COG4235 108 WQKLLALL 115
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
371-460 |
1.70e-09 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 54.79 E-value: 1.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 371 FQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKdCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDV 450
Cdd:COG3063 3 LKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEALAY 81
|
90
....*....|
gi 14389431 451 YQKALDLDSS 460
Cdd:COG3063 82 LERALELDPS 91
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
336-458 |
1.71e-09 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 56.89 E-value: 1.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 336 LKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALK 415
Cdd:COG5010 30 ALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKE 109
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 14389431 416 DCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 458
Cdd:COG5010 110 YYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
11-108 |
1.85e-09 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 60.39 E-value: 1.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 11 GNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEE 90
Cdd:COG3914 119 GNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEE 198
|
90
....*....|....*...
gi 14389431 91 AKRTYEEGLKHEANNLQL 108
Cdd:COG3914 199 AIAAYRRALELDPDNADA 216
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
224-393 |
2.72e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 55.58 E-value: 2.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 224 QALKEKELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREdyrqiakAY 303
Cdd:COG4783 3 CAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPE-------AR 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 304 ARIGNSYFKEEKYKDAIHFYNKSLAehrtpdvlkkcqqaekilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHY 383
Cdd:COG4783 76 LNLGLALLKAGDYDEALALLEKALK--------------------------LDPEHPEAYLRLARAYRALGRPDEAIAAL 129
|
170
....*....|
gi 14389431 384 TEAIKRNPRD 393
Cdd:COG4783 130 EKALELDPDD 139
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
231-401 |
4.46e-09 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 57.32 E-value: 4.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 231 LGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNSY 310
Cdd:COG0457 82 LGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDD-------ADALYNLGIAL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 311 FKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRN 390
Cdd:COG0457 155 EKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALR 234
|
170
....*....|.
gi 14389431 391 PRDAKLYSNRA 401
Cdd:COG0457 235 LAALALYQYRA 245
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
265-425 |
7.56e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 54.43 E-value: 7.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 265 QAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNSYFKEEKYKDAIHFYNKSLAehrtpdvlkkcqqaek 344
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALELDPDN-------PEAFALLGEILLQLGDLDEAIVLLHEALE---------------- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 345 ilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLE 424
Cdd:COG4783 67 ----------LDPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELD 136
|
.
gi 14389431 425 P 425
Cdd:COG4783 137 P 137
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
230-328 |
1.00e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 53.86 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 230 ELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNS 309
Cdd:COG4235 22 LLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDN-------PEALYLLGLA 94
|
90
....*....|....*....
gi 14389431 310 YFKEEKYKDAIHFYNKSLA 328
Cdd:COG4235 95 AFQQGDYAEAIAAWQKLLA 113
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
14-100 |
1.65e-08 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 53.81 E-value: 1.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 14 ALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKR 93
Cdd:COG5010 64 YNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKA 143
|
....*..
gi 14389431 94 TYEEGLK 100
Cdd:COG5010 144 ALQRALG 150
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
14-105 |
1.65e-08 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 53.27 E-value: 1.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 14 ALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKR 93
Cdd:COG4783 48 LLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIA 127
|
90
....*....|..
gi 14389431 94 TYEEGLKHEANN 105
Cdd:COG4783 128 ALEKALELDPDD 139
|
|
| STI1 |
smart00727 |
Heat shock chaperonin-binding motif; |
492-531 |
1.76e-08 |
|
Heat shock chaperonin-binding motif;
Pssm-ID: 128966 Cd Length: 41 Bit Score: 50.34 E-value: 1.76e-08
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 14389431 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLK-NPVIAQKI 531
Cdd:smart00727 1 DPEMALRLQNPQVQSLLQDMQQNPDMLAQMLQeNPQLLQLI 41
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
387-464 |
2.78e-08 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 55.01 E-value: 2.78e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14389431 387 IKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEA 464
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEA 78
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
2-123 |
3.33e-08 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 52.50 E-value: 3.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 2 EQVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 14389431 82 LEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNMEARLAERK 123
Cdd:COG4783 82 LLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPD 123
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
14-107 |
7.26e-08 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 50.17 E-value: 7.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 14 ALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKA--YEdgcKTVDLKPDWGKGYSRKAAALEFLNRFEEA 91
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAiaLE---KALKLDPNNAEALLNLAELLLELGDYDEA 78
|
90
....*....|....*.
gi 14389431 92 KRTYEEGLKHEANNLQ 107
Cdd:COG3063 79 LAYLERALELDPSALR 94
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
378-464 |
1.00e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 50.77 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 378 QAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL 457
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
....*..
gi 14389431 458 DSSCKEA 464
Cdd:COG4235 81 DPDNPEA 87
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
11-100 |
1.43e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 50.39 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 11 GNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEE 90
Cdd:COG4235 24 GRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQGDYAE 103
|
90
....*....|
gi 14389431 91 AKRTYEEGLK 100
Cdd:COG4235 104 AIAAWQKLLA 113
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
231-487 |
1.01e-06 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 51.62 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 231 LGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSy 310
Cdd:TIGR02917 471 LGAIYLGKGDLAKAREAFEKALSIEPDFFPAAANLARIDIQEGNPDDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNE- 549
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 311 fkeekyKDAIHFYNKSLAEHRTPdvlkkcqqaekilkeqerlayINPDLALEEKNKGnecfqKGDYPQAMKHYTEAIKRN 390
Cdd:TIGR02917 550 ------EEAVAWLEKAAELNPQE---------------------IEPALALAQYYLG-----KGQLKKALAILNEAADAA 597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 391 PRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAadgyQR 470
Cdd:TIGR02917 598 PDSPEAWLMLGRAQLAAGDLNKAVSSFKKLLALQPDSALALLLLADAYAVMKNYAKAITSLKRALELKPDNTEA----QI 673
|
250
....*....|....*..
gi 14389431 471 CMMAQYNRHDSPEDVKR 487
Cdd:TIGR02917 674 GLAQLLLAAKRTESAKK 690
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
235-328 |
1.38e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 46.70 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 235 AYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELcEKAIEVGRENredyrqiAKAYARIGNSYFKEE 314
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIAL-EKALKLDPNN-------AEALLNLAELLLELG 73
|
90
....*....|....
gi 14389431 315 KYKDAIHFYNKSLA 328
Cdd:COG3063 74 DYDEALAYLERALE 87
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
217-308 |
2.10e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 47.65 E-value: 2.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 217 DLPENKKQALKEKELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDY 296
Cdd:COG5010 46 GRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAY 125
|
90
....*....|..
gi 14389431 297 RQIAKAYARIGN 308
Cdd:COG5010 126 SNLAALLLSLGQ 137
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
264-328 |
2.42e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 45.46 E-value: 2.42e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14389431 264 NQAAVHFEKGDYNKCRELCEKAIEVGRENR-EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLA 328
Cdd:pfam13424 8 NLAAVLRRLGRYDEALELLEKALEIARRLLgPDHPLTATTLLNLGRLYLELGRYEEALELLERALA 73
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
11-104 |
4.33e-06 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 49.61 E-value: 4.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 11 GNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYS------RKAAALEF 84
Cdd:COG3914 153 GEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSnllfalRQACDWEV 232
|
90 100
....*....|....*....|
gi 14389431 85 LNRFEEAKRTYEEGLKHEAN 104
Cdd:COG3914 233 YDRFEELLAALARGPSELSP 252
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
22-107 |
2.15e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 44.23 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 22 DALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH 101
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
....*.
gi 14389431 102 EANNLQ 107
Cdd:COG4235 81 DPDNPE 86
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
230-388 |
2.99e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 45.29 E-value: 2.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 230 ELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNS 309
Cdd:COG4785 78 ERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDY-------AYAYLNRGIA 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 310 YFKEEKYKDAIHFYNKSLAEHRTPDvlkkcqqaEKILKEQERLAYINPDLALEEKNK--GNECFQKGDYPQAMKHYTEAI 387
Cdd:COG4785 151 LYYLGRYELAIADLEKALELDPNDP--------ERALWLYLAERKLDPEKALALLLEdwATAYLLQGDTEEARELFKLAL 222
|
.
gi 14389431 388 K 388
Cdd:COG4785 223 A 223
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
230-358 |
3.98e-05 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 45.93 E-value: 3.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 230 ELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGrenredyRQIAKAYARIGNS 309
Cdd:PLN03088 7 DKAKEAFVDDDFALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELD-------PSLAKAYLRKGTA 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 14389431 310 YFKEEKYKDAIHFYNK--SLA--EHRTPDVLKKCQqaEKILKEQERLAYINPD 358
Cdd:PLN03088 80 CMKLEEYQTAKAALEKgaSLApgDSRFTKLIKECD--EKIAEEEKDLVQPVPS 130
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
11-52 |
4.20e-05 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 40.92 E-value: 4.20e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 14389431 11 GNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKG 52
Cdd:pfam13414 1 GDAYYEQGKYEEAIEAYKKALKLDPDNPEAYYNLGLAYYKLG 42
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
14-464 |
4.57e-05 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 46.23 E-value: 4.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 14 ALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAkR 93
Cdd:TIGR02917 169 ALAENRFDEARALIDEVLTADPGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFEEA-E 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 94 TYEEGLKHEANNLQLKEGLQNMeARLAERKF------------MNPFNLPNLYQ------KLENDPRTRSLLSDpTYREL 155
Cdd:TIGR02917 248 KHADALLKKAPNSPLAHYLKAL-VDFQKKNYedaretlqdalkSAPEYLPALLLagaseyQLGNLEQAYQYLNQ-ILKYA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 156 IEQLQNKPSDLGTKLQDPRVM---TTLSVLLGVDlgsmdeeeeaatpppppppkkepkpepmeedlpENKKQALkeKELG 232
Cdd:TIGR02917 326 PNSHQARRLLASIQLRLGRVDeaiATLSPALGLD---------------------------------PDDPAAL--SLLG 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 233 NDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIG----- 307
Cdd:TIGR02917 371 EAYLALGDFEKAAEYLAKATELDPENAAARTQLGISKLSQGDPSEAIADLETAAQLDPELGRADLLLILSYLRSGqfdka 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 308 NSYFK--EEKYKD---------AIHFYNKSLAEHRtpdvlkkcQQAEKILKeqerlayINPDLALEEKNKGNECFQKGDY 376
Cdd:TIGR02917 451 LAAAKklEKKQPDnaslhnllgAIYLGKGDLAKAR--------EAFEKALS-------IEPDFFPAAANLARIDIQEGNP 515
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 377 PQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALD 456
Cdd:TIGR02917 516 DDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNEEEAVAWLEKAAELNPQEIEPALALAQYYLGKGQLKKALAILNEAAD 595
|
....*...
gi 14389431 457 LDSSCKEA 464
Cdd:TIGR02917 596 AAPDSPEA 603
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
367-407 |
5.42e-05 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 40.53 E-value: 5.42e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 14389431 367 GNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKL 407
Cdd:pfam13414 1 GDAYYEQGKYEEAIEAYKKALKLDPDNPEAYYNLGLAYYKL 41
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
300-425 |
9.02e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 42.30 E-value: 9.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 300 AKAYARIGNSYFKEEKYKDAIHFYNKSLAehrtpdvlkkcqqaekilkeqerlayINPDLALEEKNKGNECFQKGDYPQA 379
Cdd:COG4235 17 AEGWLLLGRAYLRLGRYDEALAAYEKALR--------------------------LDPDNADALLDLAEALLAAGDTEEA 70
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 14389431 380 MKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP 425
Cdd:COG4235 71 EELLERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLP 116
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
237-457 |
1.11e-04 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 45.07 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 237 KKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNsyfkeekY 316
Cdd:TIGR02917 579 GKGQLKKALAILNEAADAAPDSPEAWLMLGRAQLAAGDLNKAVSSFKKLLALQPDSALALLLLADAYAVMKN-------Y 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 317 KDAIHFYNKSLAEHRTPDVLKKCQ--------QAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIK 388
Cdd:TIGR02917 652 AKAITSLKRALELKPDNTEAQIGLaqlllaakRTESAKKIAKSLQKQHPKAALGFELEGDLYLRQKDYPAAIQAYRKALK 731
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14389431 389 RNPRDAKLysnraacyTKLLEFQLALKDCEECIQL-------EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL 457
Cdd:TIGR02917 732 RAPSSQNA--------IKLHRALLASGNTAEAVKTleawlktHPNDAVLRTALAELYLAQKDYDKAIKHYQTVVKK 799
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
293-425 |
1.72e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 42.25 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 293 REDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQ 372
Cdd:COG5010 21 RTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSR 100
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 14389431 373 KGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP 425
Cdd:COG5010 101 SGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
394-427 |
2.63e-04 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 38.17 E-value: 2.63e-04
10 20 30
....*....|....*....|....*....|....
gi 14389431 394 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF 427
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALELNPNN 34
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
5-70 |
3.77e-04 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 42.62 E-value: 3.77e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14389431 5 NELKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD 70
Cdd:cd24142 1 DELLEKAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIELDPD 66
|
|
| lysogeny_AimR |
NF038310 |
AimR family lysis-lysogeny pheromone receptor; The founding member of this family, AimR ... |
265-390 |
4.27e-04 |
|
AimR family lysis-lysogeny pheromone receptor; The founding member of this family, AimR (arbitrium receptor), is a DNA-binding phage regulatory protein that acts as a receptor for a 6-amino acid signaling peptide cleaved from the C-terminus of AimP. AimR controls expression of AimX, the third member of the quorum sensing-like arbitrium system and an inhibitor of phage lysogeny.
Pssm-ID: 468467 Cd Length: 363 Bit Score: 42.52 E-value: 4.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 265 QAAVHFEKGDYNKCRELCEKAIEvgrENREDYRQIAKAYARIGNSYFKEEkYKDAIHFYNKSLaehrtpDVLKKCQQAEK 344
Cdd:NF038310 193 LAYAYLRRNELEEAREYCNEIIN---SANNFPLLKATAYYCLGESYIFED-YEKALKYLEKSL------ELLKKIKNKKI 262
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 14389431 345 ILKEQE---RLAYI----NPDLALEEKNKGNE----CFQKGDYPQAMKHYTEAIKRN 390
Cdd:NF038310 263 ERKYKAflnTLAFLkiywNKDLDKIDILDPAEkaflEIKKGNKEKAIKILEELEKEN 319
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
230-302 |
6.29e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 39.99 E-value: 6.29e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14389431 230 ELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDY---RQIAKA 302
Cdd:COG4235 56 DLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARlleASIAEA 131
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
10-122 |
8.10e-04 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 41.15 E-value: 8.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 10 KGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFE 89
Cdd:COG0457 116 LGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEV 195
|
90 100 110
....*....|....*....|....*....|...
gi 14389431 90 EAKRTYEEGLKHEANNLQLKEGLQNMEARLAER 122
Cdd:COG0457 196 LLALLLALEQALRKKLAILTLAALAELLLLALA 228
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
15-309 |
8.60e-04 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 42.38 E-value: 8.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 15 LSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRT 94
Cdd:TIGR02917 612 LAAGDLNKAVSSFKKLLALQPDSALALLLLADAYAVMKNYAKAITSLKRALELKPDNTEAQIGLAQLLLAAKRTESAKKI 691
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 95 YEEglkHEANNLQLKEGlQNMEARLAERKFMNPFNLPNLYQKLENDPRTRSLLSDPTYrelIEQLQNKPSDLGTKLQ--- 171
Cdd:TIGR02917 692 AKS---LQKQHPKAALG-FELEGDLYLRQKDYPAAIQAYRKALKRAPSSQNAIKLHRA---LLASGNTAEAVKTLEAwlk 764
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 172 -DPRVMTTLSVLLGVDLGSMDEEEEAATPPPPpppkkepkpepmeedlpeNKKQALKEKELGNDA--YKKKDFDKALKHY 248
Cdd:TIGR02917 765 tHPNDAVLRTALAELYLAQKDYDKAIKHYQTV------------------VKKAPDNAVVLNNLAwlYLELKDPRALEYA 826
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14389431 249 DRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNS 309
Cdd:TIGR02917 827 ERALKLAPNIPAILDTLGWLLVEKGEADRALPLLRKAVNIAPEAAAIRYHLALALLATGRK 887
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
300-328 |
1.03e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 36.66 E-value: 1.03e-03
10 20
....*....|....*....|....*....
gi 14389431 300 AKAYARIGNSYFKEEKYKDAIHFYNKSLA 328
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALE 29
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
231-258 |
1.23e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 36.63 E-value: 1.23e-03
10 20
....*....|....*....|....*...
gi 14389431 231 LGNDAYKKKDFDKALKHYDRAKELDPTN 258
Cdd:pfam00515 7 LGNAYFKLGKYDEALEYYEKALELNPNN 34
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
364-393 |
1.28e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 36.24 E-value: 1.28e-03
10 20 30
....*....|....*....|....*....|
gi 14389431 364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRD 393
Cdd:pfam00515 5 YNLGNAYFKLGKYDEALEYYEKALELNPNN 34
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
300-327 |
1.56e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 36.24 E-value: 1.56e-03
10 20
....*....|....*....|....*...
gi 14389431 300 AKAYARIGNSYFKEEKYKDAIHFYNKSL 327
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKAL 28
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
364-393 |
2.03e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 35.89 E-value: 2.03e-03
10 20 30
....*....|....*....|....*....|
gi 14389431 364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRD 393
Cdd:smart00028 5 YNLGNAYLKLGDYDEALEYYEKALELDPNN 34
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
365-425 |
2.04e-03 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 40.30 E-value: 2.04e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14389431 365 NKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP 425
Cdd:cd24142 5 EKAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIELDP 65
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
235-459 |
2.62e-03 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 39.89 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 235 AYKKKDFDKALKHYDRAKELDPTN--MTYITnQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGN---- 308
Cdd:COG3071 60 AQALGDYERRDEYLAQALELAPEAelAVLLT-RAELLLDQGQAEQALATLEALRAGAPRHPQVLRLLLQAYRQLGDweel 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 309 ----------SYFKEEKYK------------------DAIHFYNKSL--AEHRTPDV----------LKKCQQAEKILKE 348
Cdd:COG3071 139 lellpalrkhKALSAEEAQalerraylgllrqaardaEALKALWKALprAERRDPELaaayaraliaLGDHDEAERLLRE 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 349 ------QERLAYINPDLALeeknkgnecfqkGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQ 422
Cdd:COG3071 219 alkrqwDPRLVRLYGRLQG------------GDPAKQLKRAEKWLKKHPNDPDLLLALGRLCLRNQLWGKAREYLEAALA 286
|
250 260 270
....*....|....*....|....*....|....*..
gi 14389431 423 LEPTfIKGYTRKAAALEAMKDYTKAMDVYQKALDLDS 459
Cdd:COG3071 287 LRPS-AEAYAELARLLEQLGDPEEAAEHYRKALALAL 322
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
234-407 |
2.73e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 39.51 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 234 DAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENredyrqiAKAYARIGNSYFKE 313
Cdd:COG4785 48 LAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDL-------AEAYNNRGLAYLLL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 314 EKYKDAIHFYNKSLAehrtpdvlkkcqqaekilkeqerlayINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRD 393
Cdd:COG4785 121 GDYDAALEDFDRALE--------------------------LDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPND 174
|
170
....*....|....
gi 14389431 394 AKLYSNRAACYTKL 407
Cdd:COG4785 175 PERALWLYLAERKL 188
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
392-523 |
3.00e-03 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 38.25 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 392 RDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRC 471
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 14389431 472 MMAQyNRHDSPEDVKRRAMA----DPEVQQIMSDpamrlILEQMQKDPQALSEHLK 523
Cdd:COG4783 82 LLKA-GDYDEALALLEKALKldpeHPEAYLRLAR-----AYRALGRPDEAIAALEK 131
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
229-258 |
3.46e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 35.11 E-value: 3.46e-03
10 20 30
....*....|....*....|....*....|
gi 14389431 229 KELGNDAYKKKDFDKALKHYDRAKELDPTN 258
Cdd:smart00028 5 YNLGNAYLKLGDYDEALEYYEKALELDPNN 34
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
371-456 |
3.77e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 37.28 E-value: 3.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 371 FQKGDYPQAMKHYTEAIKRNPRD---AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIK---GYTRKAAALEAMKDY 444
Cdd:COG1729 4 LKAGDYDEAIAAFKAFLKRYPNSplaPDALYWLGEAYYALGDYDEAAEAFEKLLKRYPDSPKapdALLKLGLSYLELGDY 83
|
90
....*....|..
gi 14389431 445 TKAMDVYQKALD 456
Cdd:COG1729 84 DKARATLEELIK 95
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
394-427 |
3.97e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 35.11 E-value: 3.97e-03
10 20 30
....*....|....*....|....*....|....
gi 14389431 394 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF 427
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPNN 34
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
7-37 |
3.97e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 35.11 E-value: 3.97e-03
10 20 30
....*....|....*....|....*....|.
gi 14389431 7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQN 37
Cdd:smart00028 4 LYNLGNAYLKLGDYDEALEYYEKALELDPNN 34
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
240-460 |
4.13e-03 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 40.07 E-value: 4.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 240 DFDKALKHYDRAKELDptnmtYITNQAAVHFEKGdYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDA 319
Cdd:TIGR02917 71 DYAAAEKELRKALSLG-----YPKNQVLPLLARA-YLLQGKFQQVLDELPGKTLLDDEGAAELLALRGLAYLGLGQLELA 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 320 IHFYNKSLA--EHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKN------KGNECFQKGDYPQAMKHYTEAIKRNP 391
Cdd:TIGR02917 145 QKSYEQALAidPRSLYAKLGLAQLALAENRFDEARALIDEVLTADPGNvdalllKGDLLLSLGNIELALAAYRKAIALRP 224
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14389431 392 RDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS 460
Cdd:TIGR02917 225 NNIAVLLALATILIEAGEFEEAEKHADALLKKAPNSPLAHYLKALVDFQKKNYEDARETLQDALKSAPE 293
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
230-288 |
6.50e-03 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 38.76 E-value: 6.50e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 14389431 230 ELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEV 288
Cdd:cd24142 5 EKAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIEL 63
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
15-69 |
6.87e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 37.63 E-value: 6.87e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 14389431 15 LSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69
Cdd:COG5010 99 SRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
7-37 |
7.23e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 34.32 E-value: 7.23e-03
10 20 30
....*....|....*....|....*....|.
gi 14389431 7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQN 37
Cdd:pfam00515 4 LYNLGNAYFKLGKYDEALEYYEKALELNPNN 34
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
385-493 |
9.83e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 36.86 E-value: 9.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14389431 385 EAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEA 464
Cdd:COG5010 45 AGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNA 124
|
90 100
....*....|....*....|....*....
gi 14389431 465 ADGYQRCMMAQYNRHDSPEDVKRRAMADP 493
Cdd:COG5010 125 YSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| |
