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Conserved domains on  [gi|161086926|ref|NP_067375|]
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proteoglycan 4 isoform 1 precursor [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HX cd00094
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...
 959-1220 2.40e-39

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.


:

Pssm-ID: 238046 [Multi-domain]  Cd Length: 194  Bit Score: 144.76  E-value: 2.40e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  959 TNLCNGKPVDGLTTLRnGTLVAFRGHYFWMLNPFRPPSPPRRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1037
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926 1038 DVVDPGYPKQIVK-GFGGLTGKIVAALSIAkykdRPESVYFFKrGGNIQQYTYKQEPMKKCTGRRPAinysvygeaaqvr 1116
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWP----DNGKTYFFK-GDKYWRYDEKTQKMDPGYPKLIE------------- 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926 1117 rrrferavgpfqthtfrihysvpmrvsyqdkgflhnevkvsTMWRGFPNVVTSAitlpnIRKPDGYdYYAFSKDQYYNID 1196
Cdd:cd00094   141 -----------------------------------------TDFPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFD 173

                         250       260
                  ....*....|....*....|....
gi 161086926 1197 VPTRTARAITTRSGqtlSKIWYNC 1220
Cdd:cd00094   174 PRSKEVRVGYPLKI---SSDWLGC 194
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 446-761 4.31e-25

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 113.88  E-value: 4.31e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPE 525
Cdd:PHA03247 2678 SPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA----PHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPG 2752

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  526 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPE 605
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPP 2830

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  606 PTTLKEPEPTTPKEPEPTTL------------KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttP 673
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLplggsvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--P 2908

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  674 KEPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPT- 751
Cdd:PHA03247 2909 PQPQAPPPPQPQPQPPPPPQPQ----PPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAp 2984

                         330
                  ....*....|
gi 161086926  752 TRKEPEPTTP 761
Cdd:PHA03247 2985 SREAPASSTP 2994
Somatomedin_B pfam01033
Somatomedin B domain;
69-106 1.69e-17

Somatomedin B domain;


:

Pssm-ID: 460034  Cd Length: 40  Bit Score: 76.96  E-value: 1.69e-17
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 161086926    69 SCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39
SO smart00201
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...
 26-68 6.15e-17

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.


:

Pssm-ID: 197571  Cd Length: 43  Bit Score: 75.49  E-value: 6.15e-17
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 161086926     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTTEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
PTZ00449 super family cl33186
104 kDa microneme/rhoptry antigen; Provisional
 634-938 1.24e-06

104 kDa microneme/rhoptry antigen; Provisional


The actual alignment was detected with superfamily member PTZ00449:

Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 53.15  E-value: 1.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE-- 709
Cdd:PTZ00449  493 KKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGeHEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSki 572

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  710 PTTPKKPEptTPKEPE-PTTPKEP-EPTTPKEPE-PTTPKEPepttrKEPE----PTTPKEPE-PTTPKEPEPTTPKKPE 781
Cdd:PTZ00449  573 PTLSKKPE--FPKDPKhPKDPEEPkKPKRPRSAQrPTRPKSP-----KLPElldiPKSPKRPEsPKSPKRPPPPQRPSSP 645

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  782 PTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPK 861
Cdd:PTZ00449  646 ERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL 725

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  862 TRKPKTTPSPLKTTSATP----ELNTTPLEVMLPTTTIPKQTPNPE--TAEVNPDHEDADGGEGEKPLI-PGPPVLFPTA 934
Cdd:PTZ00449  726 PRDEEFPFEPIGDPDAEQpddiEFFTPPEEERTFFHETPADTPLPDilAEEFKEEDIHAETGEPDEAMKrPDSPSEHEDK 805


                  ....
gi 161086926  935 IPGT 938
Cdd:PTZ00449  806 PPGD 809
 
Name Accession Description Interval E-value
HX cd00094
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...
 959-1220 2.40e-39

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.


Pssm-ID: 238046 [Multi-domain]  Cd Length: 194  Bit Score: 144.76  E-value: 2.40e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  959 TNLCNGKPVDGLTTLRnGTLVAFRGHYFWMLNPFRPPSPPRRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1037
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926 1038 DVVDPGYPKQIVK-GFGGLTGKIVAALSIAkykdRPESVYFFKrGGNIQQYTYKQEPMKKCTGRRPAinysvygeaaqvr 1116
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWP----DNGKTYFFK-GDKYWRYDEKTQKMDPGYPKLIE------------- 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926 1117 rrrferavgpfqthtfrihysvpmrvsyqdkgflhnevkvsTMWRGFPNVVTSAitlpnIRKPDGYdYYAFSKDQYYNID 1196
Cdd:cd00094   141 -----------------------------------------TDFPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFD 173

                         250       260
                  ....*....|....*....|....
gi 161086926 1197 VPTRTARAITTRSGqtlSKIWYNC 1220
Cdd:cd00094   174 PRSKEVRVGYPLKI---SSDWLGC 194
PHA03247 PHA03247
large tegument protein UL36; Provisional
 446-761 4.31e-25

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 113.88  E-value: 4.31e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPE 525
Cdd:PHA03247 2678 SPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA----PHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPG 2752

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  526 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPE 605
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPP 2830

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  606 PTTLKEPEPTTPKEPEPTTL------------KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttP 673
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLplggsvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--P 2908

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  674 KEPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPT- 751
Cdd:PHA03247 2909 PQPQAPPPPQPQPQPPPPPQPQ----PPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAp 2984

                         330
                  ....*....|
gi 161086926  752 TRKEPEPTTP 761
Cdd:PHA03247 2985 SREAPASSTP 2994
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 653-769 6.46e-19

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 84.33  E-value: 6.46e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   653 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 732
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   733 EPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 769
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Somatomedin_B pfam01033
Somatomedin B domain;
69-106 1.69e-17

Somatomedin B domain;


Pssm-ID: 460034  Cd Length: 40  Bit Score: 76.96  E-value: 1.69e-17
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 161086926    69 SCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39
SO smart00201
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...
 26-68 6.15e-17

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.


Pssm-ID: 197571  Cd Length: 43  Bit Score: 75.49  E-value: 6.15e-17
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 161086926     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTTEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
SO smart00201
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...
 67-108 2.46e-16

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.


Pssm-ID: 197571  Cd Length: 43  Bit Score: 73.56  E-value: 2.46e-16
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 161086926     67 ELSCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEEVH 108
Cdd:smart00201    2 IGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
Somatomedin_B pfam01033
Somatomedin B domain;
29-67 1.10e-15

Somatomedin B domain;


Pssm-ID: 460034  Cd Length: 40  Bit Score: 71.95  E-value: 1.10e-15
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 161086926    29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTTE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 446-777 2.10e-15

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 80.97  E-value: 2.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP-------KEPEPTTPKEPEPTTPKEPEP 518
Cdd:NF033839  153 SGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLavatymsKILDDIQKHHLQKEKHRQIVA 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  519 TTPKEPEPTTPKEPEPTTPK---EPEPTTPK------EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE 589
Cdd:NF033839  233 LIKELDELKKQALSEIDNVNtkvEIENTVHKifadmdAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP 312

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  590 PTTPKEPEpTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPE-PTTTKEPESTTRKEPEPTTPKEPEPTTPKEP 668
Cdd:NF033839  313 EPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEkPKPEVKPQPEKPKPEVKPQPETPKPEVKPQP 391

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  669 EPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKKPEPTTPKEPEPTTPkePEPTTPKEPEPTTPK 746
Cdd:NF033839  392 EKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKPKPEVK--PQPETPKPEVKPQPE 469

                         330       340       350
                  ....*....|....*....|....*....|.
gi 161086926  747 EPEPTTRKEPEPTTPKEPEPtTPKEPEPTTP 777
Cdd:NF033839  470 KPKPEVKPQPEKPKPDNSKP-QADDKKPSTP 499
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 498-748 6.10e-13

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 72.88  E-value: 6.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  498 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 577
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  578 KEPE-PTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTTKEPES-TTRKEPEP 654
Cdd:NF033839  356 PQPEkPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKpKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  655 TTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 734
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVK--PQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQAS 513

                         250
                  ....*....|....
gi 161086926  735 TTPKEPEPTTPKEP 748
Cdd:NF033839  514 TNEKATNKPKKSLP 527
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 499-813 2.93e-12

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 70.95  E-value: 2.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  499 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 578
Cdd:NF033839  158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKL-AVATYMSKILDDIQKHHLQKEKHRQIVALIKE 236

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  579 EPEPTTLKEPEPTTPK-EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 657
Cdd:NF033839  237 LDELKKQALSEIDNVNtKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPET 316

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  658 KEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 736
Cdd:NF033839  317 PKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPK 395

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  737 PK-EPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP-KEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPE 813
Cdd:NF033839  396 PEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPE 474
HX smart00120
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...
 1011-1055 3.57e-12

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).


Pssm-ID: 214524 [Multi-domain]  Cd Length: 45  Bit Score: 61.87  E-value: 3.57e-12
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 161086926   1011 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQIVKGFGGL 1055
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 515-835 5.31e-11

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 66.72  E-value: 5.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  515 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 592
Cdd:NF033839  158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLavATYMSKILDDIQKHHLQKEKHRQIVALIKEL 237

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  593 PKEPEPTTPKEPEPTTLKEPEPTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPES-TTRKEPEPTTPKEPEPTTPKEP 668
Cdd:NF033839  238 DELKKQALSEIDNVNTKVEIENTVHKifaDMDAVVTKFKKGLTQDTPKEPGNKKPSApKPGMQPSPQPEKKEVKPEPETP 317

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  669 EPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 746
Cdd:NF033839  318 KPEVKPQLEKPKPEvKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPE 397

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  747 -EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTaPAEEIQNKPEETTPASEDSDDS 825
Cdd:NF033839  398 vKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVK-PQPETPKPEVKPQPEKPKPEVK 476

                         330
                  ....*....|
gi 161086926  826 KTTLKPQKPT 835
Cdd:NF033839  477 PQPEKPKPDN 486
Hemopexin pfam00045
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...
 1011-1048 1.69e-09

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).


Pssm-ID: 395000 [Multi-domain]  Cd Length: 44  Bit Score: 54.49  E-value: 1.69e-09
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 161086926  1011 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQI 1048
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLI 36
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 459-601 2.84e-08

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 57.08  E-value: 2.84e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  459 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTLKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 534
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  535 ttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP---KEPEPTTP 601
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 507-657 3.74e-08

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 56.70  E-value: 3.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  507 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 582
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  583 ttlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPestTRKEPEPTTP 657
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPA--APEAEEPARPEPPPAPKP---KRRRRRASVP 334
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 616-769 4.16e-08

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 56.70  E-value: 4.16e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  616 TPKEPEPTTLKEPEPTTPKEPEPTTTKE---PESTTRKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKE 691
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  692 PEPTTPKEPEPttpkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTT 768
Cdd:NF040712  258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333


                  .
gi 161086926  769 P 769
Cdd:NF040712  334 P 334
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 457-730 4.33e-08

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 57.65  E-value: 4.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  457 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 536
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  537 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 616
Cdd:NF033845  621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 700

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  617 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 696
Cdd:NF033845  701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780

                         250       260       270
                  ....*....|....*....|....*....|....
gi 161086926  697 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 730
Cdd:NF033845  781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 576-729 1.31e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 55.16  E-value: 1.31e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  576 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPepttlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT 655
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGV 252

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  656 TPKEPEPTTP-----KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP---KEPEPT 727
Cdd:NF040712  253 EQPEDEPVGPgaapaAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRAS 332


                  ..
gi 161086926  728 TP 729
Cdd:NF040712  333 VP 334
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 480-633 1.41e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 55.16  E-value: 1.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  480 TPKEPEPTTLKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKE 555
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  556 PEPTTPKEPEPttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTL---KEPEPTT 632
Cdd:NF040712  258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333


                  .
gi 161086926  633 P 633
Cdd:NF040712  334 P 334
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 473-746 1.51e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 56.11  E-value: 1.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  473 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 552
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  553 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTT 632
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  633 PKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 712
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  713 PKKPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPK 746
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 497-770 1.60e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 55.73  E-value: 1.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  497 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 576
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  577 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 656
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  657 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 736
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  737 PKEPEPTTPKEPEPTTRKEPEPTTP--KEPEPTTPK 770
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 465-738 1.95e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 55.73  E-value: 1.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  465 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 544
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 624
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  625 LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 704
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  705 PKEPEPTTPKKPEPTTPKEPEPTTP--KEPEPTTPK 738
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 600-761 2.21e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 54.39  E-value: 2.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  600 TPKEPEPTTLKEPEPTTPKEPEPTTLKE---PEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPKEPEPTTPKE 675
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  676 PEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKepeptTRKE 755
Cdd:NF040712  258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKP-----KRRR 328


                  ....*.
gi 161086926  756 PEPTTP 761
Cdd:NF040712  329 RRASVP 334
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 505-778 2.60e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 55.34  E-value: 2.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  505 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 584
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  585 LKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT 664
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  665 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 744
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  745 PKEPEPTTRKEPEPTTPKEPEPTTP--KEPEPTTPK 778
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 451-593 3.12e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 54.00  E-value: 3.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 526
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  527 ttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTL---KEPEPTTP 593
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 450-722 4.55e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 54.57  E-value: 4.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 529
Cdd:NF033845  544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSD 619

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  530 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 609
Cdd:NF033845  620 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 699

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  610 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 689
Cdd:NF033845  700 DSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 779

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 161086926  690 KEPEPTTPKEPEPTTPKEPEPTTPKKPE--PTTPK 722
Cdd:NF033845  780 SDSDSDSDSDSDSDSDSDSRVTPPNNEQkaPSNPK 814
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 563-705 8.09e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 52.46  E-value: 8.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  563 EPEPTTPKEPEPTTPKE---PEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPkEPEPT 639
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAG--TPDDLASARRRRAGVEQPEDEPV-GPGAA 265

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  640 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTP 705
Cdd:NF040712  266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 531-673 1.10e-06

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 52.08  E-value: 1.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  531 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTLKEPEPTTPKEPEPTTPkEPEPT 607
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPV-GPGAA 265

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  608 TLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP---KEPEPTTP 673
Cdd:NF040712  266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 634-938 1.24e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 53.15  E-value: 1.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE-- 709
Cdd:PTZ00449  493 KKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGeHEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSki 572

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  710 PTTPKKPEptTPKEPE-PTTPKEP-EPTTPKEPE-PTTPKEPepttrKEPE----PTTPKEPE-PTTPKEPEPTTPKKPE 781
Cdd:PTZ00449  573 PTLSKKPE--FPKDPKhPKDPEEPkKPKRPRSAQrPTRPKSP-----KLPElldiPKSPKRPEsPKSPKRPPPPQRPSSP 645

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  782 PTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPK 861
Cdd:PTZ00449  646 ERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL 725

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  862 TRKPKTTPSPLKTTSATP----ELNTTPLEVMLPTTTIPKQTPNPE--TAEVNPDHEDADGGEGEKPLI-PGPPVLFPTA 934
Cdd:PTZ00449  726 PRDEEFPFEPIGDPDAEQpddiEFFTPPEEERTFFHETPADTPLPDilAEEFKEEDIHAETGEPDEAMKrPDSPSEHEDK 805


                  ....
gi 161086926  935 IPGT 938
Cdd:PTZ00449  806 PPGD 809
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 490-762 1.54e-06

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 52.64  E-value: 1.54e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  490 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 569
Cdd:NF033845  544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDSD 621

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  570 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 649
Cdd:NF033845  622 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 701

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  650 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 729
Cdd:NF033845  702 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 781

                         250       260       270
                  ....*....|....*....|....*....|...
gi 161086926  730 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 762
Cdd:NF033845  782 SDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 569-831 2.13e-06

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 52.26  E-value: 2.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  569 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 648
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  649 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTT 728
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  729 PKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEI 808
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260
                  ....*....|....*....|....
gi 161086926  809 QNKPEETTPASEDSD-DSKTTLKP 831
Cdd:NF033845  779 DSDSDSDSDSDSDSDsDSDSRVTP 802
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 651-775 4.87e-06

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 50.15  E-value: 4.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  651 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 726
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 161086926  727 ttpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 775
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEP 313
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 452-547 5.90e-06

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 50.23  E-value: 5.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 528
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343

                          90
                  ....*....|....*....
gi 161086926  529 PKEPEPTTPKEPEPTTPKE 547
Cdd:COG3266   344 AAAAAPAAPAVAKKLAADE 362
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 472-730 6.23e-06

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 50.40  E-value: 6.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  472 TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPtt 544
Cdd:NF033838  228 TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGEETLPSPSLKPEK-- 304

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 pKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE------PTTLKEPEPTTPKEpEPTTPKEPEPttLKEP-EPTTP 617
Cdd:NF033838  305 -KVAEAEKKVEEAKKKAKDQKEEDRRNYPTNTYKTLEleiaesDVKVKEAELELVKE-EAKEPRNEEK--IKQAkAKVES 380

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  618 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPeptTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTT 696
Cdd:NF033838  381 KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEK---PAEQPQPAPAPQPEKPAPKPEKPAeQPKAEKPADQQAEEDYA 457

                         250       260       270
                  ....*....|....*....|....*....|....
gi 161086926  697 PKEPEpttpkEPEPTTPKKPePTTPKEPEPTTPK 730
Cdd:NF033838  458 RRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 515-665 8.03e-06

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 49.38  E-value: 8.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  515 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 590
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  591 ttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEpttlkEPEPTTpkePEPTTTKEPESTTRKEPEPTTP---KEPEPTTP 665
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPP-----APAPAA---PAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 634-770 1.15e-05

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 49.63  E-value: 1.15e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 713
Cdd:NF033838  351 KEAELELVKEEAKEPRNEEKIKQAKAKVES--KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKPAEQPQPAPAPQP 428

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  714 KKPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTRKEPePTTPKEPEPTTPK 770
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYaRRSEEEYNRLTQQQP-PKTEKPAQPSTPK 485
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 529-828 1.27e-05

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 49.56  E-value: 1.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  609 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPE-P 686
Cdd:NF033845  621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsD 700

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  687 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEP 766
Cdd:NF033845  701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  767 TTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTT 828
Cdd:NF033845  781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKASKQHKTDALPETGDKSENT 842
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 539-689 4.56e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 47.07  E-value: 4.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  539 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 614
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  615 ttpkEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTTPKEPEPttPKEPEPTTPKePEPTTP 689
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPA--APEAEEPARPEP--PPAPKPKRRR-RRASVP 334
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 659-808 4.89e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 47.07  E-value: 4.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  659 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 734
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  735 ttpkEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPA-EEI 808
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVPSwDDV 339
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 482-762 1.88e-04

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 45.77  E-value: 1.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  482 KEPEPTTLKEPEptTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEpTTPKEPEPTTPK 554
Cdd:NF033838  216 KKAEATRLEKIK--TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGE 292

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  555 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE----PT-TPKEPE------PTTPKEPEPTTLKEpEPTTPKEPEPt 623
Cdd:NF033838  293 ETLPSPSLKPEKKVAEAEKKVEEAKKKAKDQKEEDrrnyPTnTYKTLEleiaesDVKVKEAELELVKE-EAKEPRNEEK- 370

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  624 tLKEPEPTTPKEPEPTTTKEPESTTRKepepttpKEPEPTTPKEPEPTTPKEPeptTPKEPEPTTPKEPEPTTPKepePT 703
Cdd:NF033838  371 -IKQAKAKVESKKAEATRLEKIKTDRK-------KAEEEAKRKAAEEDKVKEK---PAEQPQPAPAPQPEKPAPK---PE 436

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  704 TPKEpeptTPKKPEPTTPKEPEPTTPKEPEpttpkEPEPTTPKEPePTTRKEPEPTTPK 762
Cdd:NF033838  437 KPAE----QPKAEKPADQQAEEDYARRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 573-778 2.31e-04

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 45.39  E-value: 2.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  573 EPTTPKEPEpTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPE----PT-TPKEPEPTTT------ 641
Cdd:NF033838  272 EPATPDKKE-NDAKSSDSSVGEETLPSPSLKPEKKVAEAEKKVEEAKKKAKDQKEEDrrnyPTnTYKTLELEIAesdvkv 350

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  642 KEPESTTRKEpEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKKPEPTTp 721
Cdd:NF033838  351 KEAELELVKE-EAKEPRNEEKI-KQAKAKVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKE-KPAEQPQPAPAP- 426

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  722 kEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTRK---EPEPTTPKEPePTTPKEPEPTTPK 778
Cdd:NF033838  427 -QPEKPAPKPEKPAeQPKAEKPADQQAEEDYARRseeEYNRLTQQQP-PKTEKPAQPSTPK 485
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 607-667 3.83e-04

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 44.12  E-value: 3.83e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   607 TTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 667
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 508-588 7.80e-04

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 43.45  E-value: 7.80e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  508 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 584
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPPA 98


                  ....
gi 161086926  585 LKEP 588
Cdd:NF041121   99 LPNP 102
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 532-612 1.44e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 42.68  E-value: 1.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  532 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPPA 98


                  ....
gi 161086926  609 LKEP 612
Cdd:NF041121   99 LPNP 102
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 500-575 3.57e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.53  E-value: 3.57e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  500 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 575
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 676-751 3.60e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.53  E-value: 3.60e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  676 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 751
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 468-551 3.63e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.53  E-value: 3.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  468 PEPTTPKEPEPTTPKEPEPTtlkePEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 547
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93


                  ....
gi 161086926  548 PEPT 551
Cdd:NF041121   94 PAPP 97
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 540-628 3.89e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.14  E-value: 3.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  540 PEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTtlkEPEPTTP-K 618
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPP--PAAPPSPPGDPPEPPAPEPAPLPAPYPGSL-APPPPPPPGPAGA---APGAALPvR 92

                          90
                  ....*....|
gi 161086926  619 EPEPTTLKEP 628
Cdd:NF041121   93 VPAPPALPNP 102
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 460-543 4.06e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.14  E-value: 4.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  460 PEPTTPKEPEPTTPKEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 539
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPP-----SPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93


                  ....
gi 161086926  540 PEPT 543
Cdd:NF041121   94 PAPP 97
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 652-726 4.16e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.14  E-value: 4.16e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  652 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPkEPEPTTPKKPEPTTPKEPEP 726
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAPGAALP 90
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 708-777 4.94e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.76  E-value: 4.94e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  708 PEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPkEPEPTTPKEPEPTTP 777
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAP 85
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 628-711 5.03e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.76  E-value: 5.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  628 PEPTTPKEPEPTTTKEPESTtrkePEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 707
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93


                  ....
gi 161086926  708 PEPT 711
Cdd:NF041121   94 PAPP 97
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 660-734 6.18e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.76  E-value: 6.18e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  660 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkkpEPTTPKEPEPTTPKEPEP 734
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAP---PPPPPPGPAGAAPGAALP 90
wall_bind_EntB NF040676
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ...
 625-822 6.66e-03

cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.


Pssm-ID: 468642 [Multi-domain]  Cd Length: 476  Bit Score: 40.54  E-value: 6.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  625 LKEPEPTTPKEPEPT--TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE--- 699
Cdd:NF040676  141 LSSTAPTEKKADEKTkqVAKVQKSVKAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQEVVKPKEEPKVQEIVKPKEevk 220

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  700 -PEPTTPKEPEpttpKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 778
Cdd:NF040676  221 vQEEVKPKEEE----KVQEIVKPKEEAKVQEEVKVKEEAKVQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEI 296

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 161086926  779 KPEPTTTSPKTTTLKATTLAPKVTAPAEEiQNKPEETTPASEDS 822
Cdd:NF040676  297 AKAKEEEKAQEIAKAKEEAKAREIAKAKE-EEKAREIAKAKEEA 339
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 684-759 8.20e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.37  E-value: 8.20e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  684 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPT 759
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 700-774 9.57e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 39.99  E-value: 9.57e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  700 PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttRKEPEPTTPKEPEPTTPKEPEP 774
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPG---SLAPPPPPPPGPAGAAPGAALP 90
 
Name Accession Description Interval E-value
HX cd00094
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...
 959-1220 2.40e-39

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.


Pssm-ID: 238046 [Multi-domain]  Cd Length: 194  Bit Score: 144.76  E-value: 2.40e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  959 TNLCNGKPVDGLTTLRnGTLVAFRGHYFWMLNPFRPPSPPRRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1037
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926 1038 DVVDPGYPKQIVK-GFGGLTGKIVAALSIAkykdRPESVYFFKrGGNIQQYTYKQEPMKKCTGRRPAinysvygeaaqvr 1116
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWP----DNGKTYFFK-GDKYWRYDEKTQKMDPGYPKLIE------------- 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926 1117 rrrferavgpfqthtfrihysvpmrvsyqdkgflhnevkvsTMWRGFPNVVTSAitlpnIRKPDGYdYYAFSKDQYYNID 1196
Cdd:cd00094   141 -----------------------------------------TDFPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFD 173

                         250       260
                  ....*....|....*....|....
gi 161086926 1197 VPTRTARAITTRSGqtlSKIWYNC 1220
Cdd:cd00094   174 PRSKEVRVGYPLKI---SSDWLGC 194
PHA03247 PHA03247
large tegument protein UL36; Provisional
 446-761 4.31e-25

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 113.88  E-value: 4.31e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPE 525
Cdd:PHA03247 2678 SPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA----PHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPG 2752

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  526 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPE 605
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPP 2830

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  606 PTTLKEPEPTTPKEPEPTTL------------KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttP 673
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLplggsvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--P 2908

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  674 KEPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPT- 751
Cdd:PHA03247 2909 PQPQAPPPPQPQPQPPPPPQPQ----PPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAp 2984

                         330
                  ....*....|
gi 161086926  752 TRKEPEPTTP 761
Cdd:PHA03247 2985 SREAPASSTP 2994
PHA03247 PHA03247
large tegument protein UL36; Provisional
 449-955 1.21e-22

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 105.79  E-value: 1.21e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  449 RKEPEPTTPKEPEPTtpKEPEPTTPKEPE-PTTPKEPEPTTLKEPEPTTPKEPEPTT----PKEPEPTTPKEPEPTTPKE 523
Cdd:PHA03247 2481 RRPAEARFPFAAGAA--PDPGGGGPPDPDaPPAPSRLAPAILPDEPVGEPVHPRMLTwirgLEELASDDAGDPPPPLPPA 2558

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  524 PEPTTPKEPEPTTPKEPEPTTP----KEPEPTTPkePEPTTPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTtpkePE 597
Cdd:PHA03247 2559 APPAAPDRSVPPPRPAPRPSEPavtsRARRPDAP--PQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPS----PS 2632

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  598 PTTPKEPEPTTLKEPEPTTPKE-PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEP 676
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  677 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEP 756
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL 2791

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  757 EPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPqkptk 836
Cdd:PHA03247 2792 SESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRP----- 2866

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  837 apkptkkptkapkkptstkkPKTPKTRKPKTTPSPLKTTSATPELNTTPLEVMLPTTTIPKQtPNPETAEVNPDHEDADG 916
Cdd:PHA03247 2867 --------------------PSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERP-PQPQAPPPPQPQPQPPP 2925

                         490       500       510
                  ....*....|....*....|....*....|....*....
gi 161086926  917 GEGEKPLIPGPPVLFPTAIPGTDLLAGRLNQGININPML 955
Cdd:PHA03247 2926 PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWL 2964
PHA03247 PHA03247
large tegument protein UL36; Provisional
 371-819 1.37e-19

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 95.78  E-value: 1.37e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  371 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-----PPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPE 445
Cdd:PHA03247 2502 GPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTwirglEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPA 2581

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKE-----PEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 518
Cdd:PHA03247 2582 VTSRARrpdapPQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRV 2661

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  519 TTPKE-------------PEPTTPKEPEPTT--------PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTT 576
Cdd:PHA03247 2662 SRPRRarrlgraaqasspPQRPRRRAARPTVgsltsladPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaAPAP 2741

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  577 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE--PEPTTPKePEPTTLKEPEPTTPKEPEPTTTKEPESTtrkePEP 654
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAagPPRRLTR-PAVASLSESRESLPSPWDPADPPAAVLA----PAA 2816

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  655 TTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTT--------PKEP----EPTTPKEPEPTTPKEPEPTTPKKPEPTTPK 722
Cdd:PHA03247 2817 ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSlplggsvaPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRST 2895

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  723 EPEPTTPKEPEPttPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVT 802
Cdd:PHA03247 2896 ESFALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVA 2973

                         490
                  ....*....|....*...
gi 161086926  803 APAEEI-QNKPEETTPAS 819
Cdd:PHA03247 2974 VPRFRVpQPAPSREAPAS 2991
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 653-769 6.46e-19

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 84.33  E-value: 6.46e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   653 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 732
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   733 EPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 769
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 469-582 7.18e-19

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 83.95  E-value: 7.18e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   469 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 548
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....
gi 161086926   549 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 582
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 461-577 7.18e-19

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 83.95  E-value: 7.18e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   461 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 540
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   541 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 577
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 453-569 7.18e-19

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 83.95  E-value: 7.18e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   453 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 532
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   533 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 569
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 661-777 7.32e-19

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 83.95  E-value: 7.32e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   661 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 740
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   741 EPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 777
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 493-606 7.39e-19

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 83.95  E-value: 7.39e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   493 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 572
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....
gi 161086926   573 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 606
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 509-622 3.69e-18

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 82.02  E-value: 3.69e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   509 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEP 588
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....
gi 161086926   589 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 622
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 485-601 5.18e-18

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 81.64  E-value: 5.18e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   485 EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 564
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   565 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP 601
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 652-761 6.54e-18

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 81.25  E-value: 6.54e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   652 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 731
Cdd:pfam02389   14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93

                           90       100       110
                   ....*....|....*....|....*....|
gi 161086926   732 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 761
Cdd:pfam02389   94 PEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 452-561 7.28e-18

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 81.25  E-value: 7.28e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 531
Cdd:pfam02389   14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93

                           90       100       110
                   ....*....|....*....|....*....|
gi 161086926   532 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 561
Cdd:pfam02389   94 PEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 629-745 7.49e-18

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 81.25  E-value: 7.49e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   629 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 708
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   709 EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 745
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Somatomedin_B pfam01033
Somatomedin B domain;
69-106 1.69e-17

Somatomedin B domain;


Pssm-ID: 460034  Cd Length: 40  Bit Score: 76.96  E-value: 1.69e-17
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 161086926    69 SCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 525-638 1.84e-17

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 80.10  E-value: 1.84e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   525 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 604
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....
gi 161086926   605 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 638
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 621-737 3.05e-17

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 79.33  E-value: 3.05e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   621 EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 700
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   701 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 737
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 448-773 5.03e-17

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 87.05  E-value: 5.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  448 TRKEPEPTTPKEP-EPTTPKEPE-PTTPKEP-EPTTPKEPEPTTLkepePTTPKEPE-PTTPKEP----EPTTPKEPE-P 518
Cdd:PTZ00449  576 SKKPEFPKDPKHPkDPEEPKKPKrPRSAQRPtRPKSPKLPELLDI----PKSPKRPEsPKSPKRPpppqRPSSPERPEgP 651

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  519 TTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPePTTPKEPE 597
Cdd:PTZ00449  652 KIIKSPKpPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLP-PKLPRDEE 730

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  598 P--TTPKEPEPTTLKEPEPTTPKEPEPTTLKEpepTTPKEPEPTTTKEPESTTRKEPEPTTPKEP--EPTTPKEPEPTTP 673
Cdd:PTZ00449  731 FpfEPIGDPDAEQPDDIEFFTPPEEERTFFHE---TPADTPLPDILAEEFKEEDIHAETGEPDEAmkRPDSPSEHEDKPP 807

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  674 KEpEPTTPKEPE-------PTTPKEPEP-TTPKEP--EPTTPKEPEP----TTPKKPEPTTPKEPEPTTPKEPEPTTPKE 739
Cdd:PTZ00449  808 GD-HPSLPKKRHrldglalSTTDLESDAgRIAKDAsgKIVKLKRSKSfddlTTVEEAEEMGAEARKIVVDDDGTEADDED 886

                         330       340       350
                  ....*....|....*....|....*....|....
gi 161086926  740 PEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 773
Cdd:PTZ00449  887 THPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPK 920
SO smart00201
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...
 26-68 6.15e-17

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.


Pssm-ID: 197571  Cd Length: 43  Bit Score: 75.49  E-value: 6.15e-17
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 161086926     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTTEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 498-617 9.12e-17

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 78.17  E-value: 9.12e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   498 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 577
Cdd:pfam02389    6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 161086926   578 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 617
Cdd:pfam02389   84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 474-593 9.57e-17

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 78.17  E-value: 9.57e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   474 KEPEPTTPKEPEPTTLKepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 553
Cdd:pfam02389    6 KQPCQPPPQEPCVPTTK--EPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 161086926   554 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 593
Cdd:pfam02389   84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 533-645 1.02e-16

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 77.79  E-value: 1.02e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   533 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEP 612
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|...
gi 161086926   613 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 645
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPE 119
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 589-705 1.11e-16

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 77.79  E-value: 1.11e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   589 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEP 668
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   669 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 705
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 605-721 1.52e-16

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 77.40  E-value: 1.52e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   605 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 684
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   685 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP 721
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
SO smart00201
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...
 67-108 2.46e-16

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.


Pssm-ID: 197571  Cd Length: 43  Bit Score: 73.56  E-value: 2.46e-16
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 161086926     67 ELSCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEEVH 108
Cdd:smart00201    2 IGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 514-633 4.55e-16

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 76.25  E-value: 4.55e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   514 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 593
Cdd:pfam02389    6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 161086926   594 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 633
Cdd:pfam02389   84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 549-665 9.05e-16

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 75.09  E-value: 9.05e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   549 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP 628
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   629 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 665
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 565-681 9.97e-16

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 75.09  E-value: 9.97e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   565 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 644
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   645 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 681
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 573-689 1.02e-15

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 75.09  E-value: 1.02e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   573 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 652
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   653 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 689
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Somatomedin_B pfam01033
Somatomedin B domain;
29-67 1.10e-15

Somatomedin B domain;


Pssm-ID: 460034  Cd Length: 40  Bit Score: 71.95  E-value: 1.10e-15
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 161086926    29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTTE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 581-697 1.12e-15

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 75.09  E-value: 1.12e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   581 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEP 660
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   661 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 557-673 1.85e-15

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 74.32  E-value: 1.85e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   557 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP 636
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   637 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP 673
Cdd:pfam02389   87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 446-777 2.10e-15

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 80.97  E-value: 2.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP-------KEPEPTTPKEPEPTTPKEPEP 518
Cdd:NF033839  153 SGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLavatymsKILDDIQKHHLQKEKHRQIVA 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  519 TTPKEPEPTTPKEPEPTTPK---EPEPTTPK------EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE 589
Cdd:NF033839  233 LIKELDELKKQALSEIDNVNtkvEIENTVHKifadmdAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP 312

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  590 PTTPKEPEpTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPE-PTTTKEPESTTRKEPEPTTPKEPEPTTPKEP 668
Cdd:NF033839  313 EPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEkPKPEVKPQPEKPKPEVKPQPETPKPEVKPQP 391

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  669 EPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKKPEPTTPKEPEPTTPkePEPTTPKEPEPTTPK 746
Cdd:NF033839  392 EKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKPKPEVK--PQPETPKPEVKPQPE 469

                         330       340       350
                  ....*....|....*....|....*....|.
gi 161086926  747 EPEPTTRKEPEPTTPKEPEPtTPKEPEPTTP 777
Cdd:NF033839  470 KPKPEVKPQPEKPKPDNSKP-QADDKKPSTP 499
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 450-545 3.83e-15

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 73.55  E-value: 3.83e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 529
Cdd:pfam02389   28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYP 107

                           90
                   ....*....|....*.
gi 161086926   530 KEPEPTTPKEPEPTTP 545
Cdd:pfam02389  108 KAPEPCQPKVPEPCPS 123
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 474-779 5.38e-15

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 80.12  E-value: 5.38e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  474 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKE-PEPTTPKEPEPTtpKEPEPTT 552
Cdd:PTZ00449  490 KKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKESD--EPKEgGKPGETKEGEVG--KKPGPAK 565

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  553 PKEPEPTTPKEPEPTTPKEPE-PTTPKEPEpttlKEPEPTTPKEP-EPTTPKEPE----PTTLKEPE-PTTPKEPEPTTl 625
Cdd:PTZ00449  566 EHKPSKIPTLSKKPEFPKDPKhPKDPEEPK----KPKRPRSAQRPtRPKSPKLPElldiPKSPKRPEsPKSPKRPPPPQ- 640

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  626 kepEPTTPKEPE-PTTTKEPESTTRKEPePTTPKEPE----------PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPeP 694
Cdd:PTZ00449  641 ---RPSSPERPEgPKIIKSPKPPKSPKP-PFDPKFKEkfyddyldaaAKSKETKTTVVLDESFESILKETLPETPGTP-F 715

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  695 TTPKEPEPTTPKEPEP--TTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---------KEPEPTTR-KEPE----- 757
Cdd:PTZ00449  716 TTPRPLPPKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPlpdilaeefKEEDIHAEtGEPDeamkr 795

                         330       340
                  ....*....|....*....|..
gi 161086926  758 PTTPKEPEPTTPKEpEPTTPKK 779
Cdd:PTZ00449  796 PDSPSEHEDKPPGD-HPSLPKK 816
PHA03247 PHA03247
large tegument protein UL36; Provisional
 452-713 6.62e-15

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 80.37  E-value: 6.62e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP----EPTTPKEPEPTTPKEPEPTTPKEPEPT 527
Cdd:PHA03247 2814 PAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVS 2892

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  528 TPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKE----PEPTTPKEPEPTTPKEPEPTTLKEPEPtTPKEPEP----T 599
Cdd:PHA03247 2893 RSTESFALPPDQPER----PPQPQAPPPPQPQPQPPpppqPQPPPPPPPRPQPPLAPTTDPAGAGEP-SGAVPQPwlgaL 2967

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  600 TPKEPEPTTLKEPEPTTPKE-PEPTTlkepePTTPKEPEPTTTKEPESTTRKEpEPTTPKEPEPTTPKEPEPTTPKEPEP 678
Cdd:PHA03247 2968 VPGRVAVPRFRVPQPAPSREaPASST-----PPLTGHSLSRVSSWASSLALHE-ETDPPPVSLKQTLWPPDDTEDSDADS 3041

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 161086926  679 TTPKEPEPTTPKEPEPTTPKEPEPTTpKEPEPTTP 713
Cdd:PHA03247 3042 LFDSDSERSDLEALDPLPPEPHDPFA-HEPDPATP 3075
PHA03247 PHA03247
large tegument protein UL36; Provisional
 236-769 1.66e-14

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 79.21  E-value: 1.66e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  236 PttphskvttspkttAAKPVTPKPSLAPNSETSKEASLAsnkettvetkettatnkqssaskkktTSAKETRSaektsdk 315
Cdd:PHA03247 2557 P--------------AAPPAAPDRSVPPPRPAPRPSEPA--------------------------VTSRARRP------- 2589

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  316 DVEPTSTTPKNSAPTTTKKPVTTTKEPvpttpkepepttpkepppttkkpepttpkepepttpkepeptTPKEPEPTTPK 395
Cdd:PHA03247 2590 DAPPQSARPRAPVDDRGDPRGPAPPSP------------------------------------------LPPDTHAPDPP 2627

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  396 EPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 475
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPT 2707

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  476 PEPttpkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 555
Cdd:PHA03247 2708 PEP----APHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR 2782

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  556 PEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 635
Cdd:PHA03247 2783 LTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGG 2860

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  636 P----EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTtpkePEPT 711
Cdd:PHA03247 2861 DvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQ----PPPP 2934

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  712 TPKKPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTRKEPEPTTPKE-PEPTTP 769
Cdd:PHA03247 2935 PPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAPSREaPASSTP 2994
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 454-855 1.91e-14

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 78.58  E-value: 1.91e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  454 PTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE-PEPTTLKEPEPTTPKEPE--PTTPKEPE-PTTPKEP-EPTTPKEPE-P 526
Cdd:PTZ00449  521 PKAPGDKEGEEGeHEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSkiPTLSKKPEfPKDPKHPkDPEEPKKPKrP 600

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  527 TTPKEP-EPTTPKEPE----PTTPKEPE-PTTPKEPEPTTpkepEPTTPKEPE-PTTPKEPEPttlkepePTTPKEPEPT 599
Cdd:PTZ00449  601 RSAQRPtRPKSPKLPElldiPKSPKRPEsPKSPKRPPPPQ----RPSSPERPEgPKIIKSPKP-------PKSPKPPFDP 669

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  600 TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPePTTPKEPEptTPKEPepttPKEPEPT 679
Cdd:PTZ00449  670 KFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLP-PKLPRDEE--FPFEP----IGDPDAE 742

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  680 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTRKEPE- 757
Cdd:PTZ00449  743 QPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAmKRPDSPSEHEDKPPGDHPSLPKKRHRLDg 822

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  758 ---PTTPKEPEP-TTPKEP--EPTTPKKPEP-TTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLK 830
Cdd:PTZ00449  823 lalSTTDLESDAgRIAKDAsgKIVKLKRSKSfDDLTTVEEAEEMGAEARKIVVDDDGTEADDEDTHPPEEKHKSEVRRRR 902

                         410       420
                  ....*....|....*....|....*
gi 161086926  831 PqkptkapkptkkpTKAPKKPTSTK 855
Cdd:PTZ00449  903 P-------------PKKPSKPKKPS 914
Cornifin pfam02389
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...
 538-657 1.97e-14

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.


Pssm-ID: 280537 [Multi-domain]  Cd Length: 135  Bit Score: 71.24  E-value: 1.97e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   538 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 617
Cdd:pfam02389    6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 161086926   618 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 657
Cdd:pfam02389   84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 525-751 1.90e-13

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 75.51  E-value: 1.90e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  525 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 603
Cdd:PRK10263  338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  604 PEPTTLKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 683
Cdd:PRK10263  416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVE 491

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  684 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTP-KKPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPT 751
Cdd:PRK10263  492 PEPvveeTKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 498-748 6.10e-13

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 72.88  E-value: 6.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  498 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 577
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  578 KEPE-PTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTTKEPES-TTRKEPEP 654
Cdd:NF033839  356 PQPEkPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKpKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  655 TTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 734
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVK--PQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQAS 513

                         250
                  ....*....|....
gi 161086926  735 TTPKEPEPTTPKEP 748
Cdd:NF033839  514 TNEKATNKPKKSLP 527
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 458-774 1.07e-12

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 72.90  E-value: 1.07e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  458 KEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKE---- 531
Cdd:PHA03307   59 AAACDRFEPPTGPP-PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTppPASPPPSPAPDlsem 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  532 --PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 609
Cdd:PHA03307  138 lrPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASA 217

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  610 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 685
Cdd:PHA03307  218 SSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPApitlPTRIWEASGWNGPSSRPGPASSSSSPRERSPS 297

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  686 PTTPKEPEPTTPKEPEPTTPKEPEPTT-PKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEP 764
Cdd:PHA03307  298 PSPSSPGSGPAPSSPRASSSSSSSRESsSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSS 377

                         330
                  ....*....|
gi 161086926  765 EPTTPKEPEP 774
Cdd:PHA03307  378 PAASAGRPTR 387
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 493-727 1.64e-12

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 72.43  E-value: 1.64e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  493 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 571
Cdd:PRK10263  338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  572 PEPTTPKEPEPTTLKEPEPTtpkePEPTTPKEPEPTTLKEPEPttPKEPEPTTLKEPEPTTPKEPEPTTTKEPEsttrKE 651
Cdd:PRK10263  416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQS--TFAPQSTYQTEQTYQQPAAQEPLYQQPQP----VE 485

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  652 PEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKKPepttPKEPEPT 727
Cdd:PRK10263  486 QQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 509-735 2.66e-12

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 71.65  E-value: 2.66e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  509 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE 587
Cdd:PRK10263  338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  588 PEPTTPKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 667
Cdd:PRK10263  416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVE 491

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  668 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPKEPepttPKEPEPT 735
Cdd:PRK10263  492 PEPvveeTKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 499-813 2.93e-12

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 70.95  E-value: 2.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  499 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 578
Cdd:NF033839  158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKL-AVATYMSKILDDIQKHHLQKEKHRQIVALIKE 236

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  579 EPEPTTLKEPEPTTPK-EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 657
Cdd:NF033839  237 LDELKKQALSEIDNVNtKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPET 316

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  658 KEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 736
Cdd:NF033839  317 PKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPK 395

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  737 PK-EPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP-KEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPE 813
Cdd:NF033839  396 PEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPE 474
HX smart00120
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...
 1011-1055 3.57e-12

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).


Pssm-ID: 214524 [Multi-domain]  Cd Length: 45  Bit Score: 61.87  E-value: 3.57e-12
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 161086926   1011 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQIVKGFGGL 1055
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 452-773 1.32e-11

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 69.24  E-value: 1.32e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE 531
Cdd:PRK07764  415 AAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP---AGGAPSPPPAAAPSAQPAPAPAAA--PEPTAAPAPAPPAAPA 489

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  532 PEPTTPKEPEPTTP------------------------------KEPEPT-----------------------TPKEPE- 557
Cdd:PRK07764  490 PAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglarrfaSPGNAEv 569

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  558 -------------------PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP-TTPKEPEPTTLKEPEPTTP 617
Cdd:PRK07764  570 lvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPaGAAAAPAEASAAPAPGVAA 649

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  618 KEPEPTTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:PRK07764  650 PEHHPKHVAVPDASDGGDGWP-----AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQA 724

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  698 KEPEPTTPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTTPKEPE 773
Cdd:PRK07764  725 AQGASAPSPAADDPVPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEddaPSMDDEDRRDAE 802
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 451-774 1.37e-11

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 69.24  E-value: 1.37e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTP 529
Cdd:PRK07764  405 APAAApAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS---PAGNAPAGGAPSPPPAAAPSAQPAPAPAAA--PEPTAA 479

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  530 KEPEPTTPKEPEPTTPKEPEPTTP------------------------------KEPEPT-------------------- 559
Cdd:PRK07764  480 PAPAPPAAPAPAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglar 559

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  560 ---TPKEPE--------------------PTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTtlkePEPTT 616
Cdd:PRK07764  560 rfaSPGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAP----APAGA 632

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  617 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPE 693
Cdd:PRK07764  633 AAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPapaPAAPAAPAGAAPAQPAPAPAATPPAG 712

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  694 PTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 773
Cdd:PRK07764  713 QADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792


                  .
gi 161086926  774 P 774
Cdd:PRK07764  793 M 793
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 497-738 3.90e-11

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 67.26  E-value: 3.90e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  497 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPT----TPKE 571
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSKsvdaVAKP 407

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  572 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKE 651
Cdd:PLN03209  408 AEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAA 487

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  652 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTP 729
Cdd:PLN03209  488 APPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSPytMYEDLKPP 567


                  ....*....
gi 161086926  730 KEPEPTTPK 738
Cdd:PLN03209  568 TSPTPSPVL 576
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 515-835 5.31e-11

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 66.72  E-value: 5.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  515 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 592
Cdd:NF033839  158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLavATYMSKILDDIQKHHLQKEKHRQIVALIKEL 237

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  593 PKEPEPTTPKEPEPTTLKEPEPTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPES-TTRKEPEPTTPKEPEPTTPKEP 668
Cdd:NF033839  238 DELKKQALSEIDNVNTKVEIENTVHKifaDMDAVVTKFKKGLTQDTPKEPGNKKPSApKPGMQPSPQPEKKEVKPEPETP 317

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  669 EPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 746
Cdd:NF033839  318 KPEVKPQLEKPKPEvKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPE 397

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  747 -EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTaPAEEIQNKPEETTPASEDSDDS 825
Cdd:NF033839  398 vKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVK-PQPETPKPEVKPQPEKPKPEVK 476

                         330
                  ....*....|
gi 161086926  826 KTTLKPQKPT 835
Cdd:NF033839  477 PQPEKPKPDN 486
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 454-777 5.51e-11

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 66.93  E-value: 5.51e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  454 PTTPKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTLKEPEPTtpkePEPTTPKEPEPTTP-KEPEPTTPKEPEPTTP 529
Cdd:PRK07764  390 GAGAPAAAAPSAAAAAPAaapAPAAAAPAAAAAPAPAAAPQPAPA----PAPAPAPPSPAGNApAGGAPSPPPAAAPSAQ 465

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  530 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTP------------------------------KEPEPtTPKE 579
Cdd:PRK07764  466 PAPAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEA-TVLG 542

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  580 PEPTTL--------------------------------------------KEPEPTTPKEPEPTTPKEPEPttlkEPEPT 615
Cdd:PRK07764  543 VRGDTLvlgfstgglarrfaspgnaevlvtalaeelggdwqveavvgpapGAAGGEGPPAPASSGPPEEAA----RPAAP 618

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  616 TPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 695
Cdd:PRK07764  619 AAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAP 698

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  696 TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTPKEPEPTTRKEPEPTTPKEPEPTT 768
Cdd:PRK07764  699 AQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPddppdpaGAPAQPPPPPAPAPAAAPAAAPPPSP 778


                  ....*....
gi 161086926  769 PKEPEPTTP 777
Cdd:PRK07764  779 PSEEEEMAE 787
PHA03378 PHA03378
EBNA-3B; Provisional
 487-818 9.14e-11

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 66.63  E-value: 9.14e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  487 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 566
Cdd:PHA03378  522 ATLLPPSPPQPRAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLG-PLQIQPLTSPTTSQLASSAPSYAQTPWPVP 600

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  567 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP---EPTTLKEPEPTTPKEPEPTTTKE 643
Cdd:PHA03378  601 HPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPpqvEITPYKPTWTQIGHIPYQPSPTG 680

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  644 PESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 723
Cdd:PHA03378  681 ANTMLPIQWAPGTMQPP----PRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARP 756

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  724 PEPT-TPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVT 802
Cdd:PHA03378  757 PAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRG 836

                         330
                  ....*....|....*.
gi 161086926  803 APAEEIQNKPEETTPA 818
Cdd:PHA03378  837 RPSLKKPAALERQAAA 852
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 446-757 1.23e-10

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 66.16  E-value: 1.23e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP- 524
Cdd:PRK07764  419 AAAAPAPAAAPQPAPAPA-PAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAp 497

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  525 -EPTTP------------------------------KEPEPT-----------------------TPKEPE--------- 541
Cdd:PRK07764  498 aAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglarrfaSPGNAEvlvtalaee 577

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  542 -----------PTTPKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:PRK07764  578 lggdwqveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPAAPAPAGAA-AAPAEASAAPAPGVAAPEHHPKH 656

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  609 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 688
Cdd:PRK07764  657 VAVPDASDGGDGWPAKAGGAAPAAPPPAPA-----PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  689 PKEPEPTTPKEPEPTTPKEPEPtTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTRKEPE 757
Cdd:PRK07764  732 SPAADDPVPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEddaPSMDDEDRRDAE 802
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 462-827 2.09e-10

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 65.39  E-value: 2.09e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  462 PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 541
Cdd:PRK07764  386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  542 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP----------------KEPEPtTPKEPE 605
Cdd:PRK07764  466 PAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPeilaavpkrsrktwaiLLPEA-TVLGVR 544

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  606 PTTL----------------KEPE--------------------PTTPKEPEPTTLKEPEPTTPKE--PEPTTTKEPEST 647
Cdd:PRK07764  545 GDTLvlgfstgglarrfaspGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAP 624

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  648 TRKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKEPEP 726
Cdd:PRK07764  625 AAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGAAPAQPAP 703

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  727 TTPKEPEPTTPKEPEPTTPKEPEPTTRKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAE 806
Cdd:PRK07764  704 APAATPPAGQADDPAAQPPQAAQGASAP-SPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782

                         410       420
                  ....*....|....*....|.
gi 161086926  807 EIQNKPEETTPASEDSDDSKT 827
Cdd:PRK07764  783 EEMAEDDAPSMDDEDRRDAEE 803
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 589-777 2.13e-10

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 65.49  E-value: 2.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  589 EPTTPKEPEPTTPKEP-EPTTLKEPEPTtPKEPEPTTLKEPEPTTPkEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 667
Cdd:PRK10263  338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  668 PE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPT---TPKKPEPTTPKEPE-PTTPKEPEPTTPKE 739
Cdd:PRK10263  416 AQqpyyAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQS--TFAPQSTyqtEQTYQQPAAQEPLYqQPQPVEQQPVVEPE 493

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 161086926  740 P--EPTTPKEP---------EPTTRKEPEPTTPKEPEPTTPKEPEPTTP 777
Cdd:PRK10263  494 PvvEETKPARPplyyfeeveEKRAREREQLAAWYQPIPEPVKEPEPIKS 542
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
529-710 2.82e-10

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 64.60  E-value: 2.82e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  609 LKE---------PEPTT-------------------------------PKEPEPTT---------------LKEPEPTTP 633
Cdd:PRK14948  441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQafakvlgrsiklnleSQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 710
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 545-777 2.89e-10

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 64.56  E-value: 2.89e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPTTLKEPEPTTPKEP-EPTTPKEPEPTTLKEPEPTtpkePEPT 623
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSK----SVDA 403

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  624 TLKEPEPTTPKEPEPTTT---KEPESTTRKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPK 698
Cdd:PLN03209  404 VAKPAEPDVVPSPGSASNvpeVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS--TSSVPAVPDTAPAT 481

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  699 EPEPTTPKEPEPTTPKKPEPTTPKEPEPTTpkePEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 777
Cdd:PLN03209  482 AATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSP 557
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
545-734 2.91e-10

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 64.60  E-value: 2.91e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 624
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  625 LKEPEPTTPKEPEPTTTK------------EPESTT-----------------------------------RKEPEPTTP 657
Cdd:PRK14948  441 LEELWQQILAKLELPSTRmllsqqaelvslDSNRAViavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  658 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKePEPTTPKEPEP 734
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 446-777 3.05e-10

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 64.81  E-value: 3.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPT-TPKEPEPTTpkePEPTTPKEPEPTTLKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEP 524
Cdd:PHA03307   93 STLAPASPAREGSPTPPGpSSPDPPPPT---PPPASPPPSPAPDLSEMLRPVGSPGPP-----PAASPPAAGASPAAVAS 164

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  525 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 604
Cdd:PHA03307  165 DAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSES 244

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  605 EPTTLKEPEPTTPKEPEPTTLKEP--EPTTPKEPEPTTTKEPESTTRKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPK 682
Cdd:PHA03307  245 SGCGWGPENECPLPRPAPITLPTRiwEASGWNGPSSRPGPASSSSSPRERSP----SPSPSSPGSGPAPSSPRASSSSSS 320

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  683 EPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTRKEPEPTT 760
Cdd:PHA03307  321 SRESSSSS-TSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRAR 399

                         330
                  ....*....|....*..
gi 161086926  761 PKEPEPTTPKEPEPTTP 777
Cdd:PHA03307  400 RRDATGRFPAGRPRPSP 416
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
505-694 3.90e-10

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 64.21  E-value: 3.90e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  505 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 584
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  585 LKE---------PEPTT-------------------------------PKEPEPTTPKEP---EPTTL----KEPEPTTP 617
Cdd:PRK14948  441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKvlgRSIKLnlesQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  618 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 694
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 473-651 5.56e-10

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 63.73  E-value: 5.56e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  473 PKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 552
Cdd:PRK07994  361 PAAPLPEPEVPPQSAA---PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  553 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLkePEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTLKEpeptt 632
Cdd:PRK07994  438 AKKSEPAAASRARPV-NSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHE----- 507

                         170
                  ....*....|....*....
gi 161086926  633 pKEPEPTTTKEPESTTRKE 651
Cdd:PRK07994  508 -KTPELAAKLAAEAIERDP 525
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 465-614 9.13e-10

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 62.96  E-value: 9.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  465 PKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 544
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  545 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTT----PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 614
Cdd:PRK07994  438 AKKSEPAAASRARPV-NSALERLASVRPAPSAlekaPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 452-777 1.19e-09

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 62.70  E-value: 1.19e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPk 530
Cdd:PRK07764  396 AAAPSAAAAAPA-AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNApAGGAPSPPPAAAPSAQPAPAPAAA- 473

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  531 ePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------------TTPKEPEPTTP-KEPEPT---------TLKE 587
Cdd:PRK07764  474 -PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDaatlrerwpeilaAVPKRSRKTWAiLLPEATvlgvrgdtlVLGF 552

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  588 PEP----------------------------------TTPKEPEPTTPKEPEPTTLKE--PEPTTPKEPEPTtlkePEPT 631
Cdd:PRK07764  553 STGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAP----AAPA 628

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  632 TPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPT 711
Cdd:PRK07764  629 PAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA--PAAPAAPAGAAPAQPAPAPA 706

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  712 TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTRKEPEPTTPKEPEPTTPKEPEPTTP 777
Cdd:PRK07764  707 ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPddppdpaGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 451-777 1.42e-09

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 62.88  E-value: 1.42e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 528
Cdd:PHA03307  107 TPPGPSSPDPPPPTppPASPPPSPAPDLSEMLRPVGSPG--PPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETAR 184

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:PHA03307  185 APSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPIT 264

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  609 LKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkepeP 686
Cdd:PHA03307  265 LPTRiwEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRG-----A 339

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  687 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKE-PEPTTRKEPEPTTPKE 763
Cdd:PHA03307  340 AVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDaTGRFPAGRPRPSPLDA 419

                         330
                  ....*....|....
gi 161086926  764 PEptTPKEPEPTTP 777
Cdd:PHA03307  420 GA--ASGAFYARYP 431
Hemopexin pfam00045
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...
 1011-1048 1.69e-09

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).


Pssm-ID: 395000 [Multi-domain]  Cd Length: 44  Bit Score: 54.49  E-value: 1.69e-09
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 161086926  1011 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQI 1048
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLI 36
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 500-667 2.32e-09

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 61.81  E-value: 2.32e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  500 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 576
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPaVPLPETTSQLLAARQQlqRAQGATKAKKSEPAA 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  577 PKEPEPTTlKEPEPTTPKEPEPTTPkePEPTTLKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTTKEpesttrKEPEPTT 656
Cdd:PRK07994  446 ASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHE------KTPELAA 514

                         170
                  ....*....|.
gi 161086926  657 PKEPEPTTPKE 667
Cdd:PRK07994  515 KLAAEAIERDP 525
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
582-777 2.45e-09

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 61.82  E-value: 2.45e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  582 PTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPE 661
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAA---PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  662 PTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTT 736
Cdd:PRK12323  452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 161086926  737 PKEPEPTTPKEPEPTTRKEPEPTTPKEPE--PTTPKEPEPTTP 777
Cdd:PRK12323  532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
569-750 2.59e-09

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 61.52  E-value: 2.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  569 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 648
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  649 RKE---------PEPTT-------------------------------PKEPEPTTP---------------KEPEPTTP 673
Cdd:PRK14948  441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAfakvlgrsiklnlesQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  674 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 750
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
669-755 2.61e-09

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 61.74  E-value: 2.61e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  669 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEP 748
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDPD-PVDPEPVDPVIPDPTIPDIGQSDTPPIT 631


                  ....*..
gi 161086926  749 EPTTRKE 755
Cdd:PRK15313  632 EHQFRPE 638
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 446-777 2.62e-09

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 61.73  E-value: 2.62e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTLKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPT 519
Cdd:PHA03307  112 SSPDPPPPTPPPASPPPSPAPDlsEMLRPVGSPGPPPAASPPAAGASPAAvasdAASSRQAALPLSSPEETARAPSSPPA 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  520 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP--E 597
Cdd:PHA03307  192 EPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRiwE 271

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  598 PTTPKEPEPTTLKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKePEPTTPKEPEPTTPKEPE 677
Cdd:PHA03307  272 ASGWNGPSSRPGPASSSSSPRERSP----SPSPSSPGSGPAPSSPRASSSSSSSRESSSSS-TSSSSESSRGAAVSPGPS 346

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  678 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTRKE 755
Cdd:PHA03307  347 PSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDATGRFPAGRPRPSP----LDAGAA 422

                         330       340
                  ....*....|....*....|..
gi 161086926  756 PEPTTPKEPEPTTPKEPEPTTP 777
Cdd:PHA03307  423 SGAFYARYPLLTPSGEPWPGSP 444
PHA03247 PHA03247
large tegument protein UL36; Provisional
 473-760 3.64e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.49  E-value: 3.64e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  473 PKEPEPTTPKEPEPTTLK---------EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkePEPTTPKEPEPT 543
Cdd:PHA03247  206 PSGPGPAAPADLTAAALHlygasetylQDEPFVERRVVISHPLRGDIAAPAPPPVVGEGADRA-----PETARGATGPPP 280

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  544 TPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTPKEPEPTTLKEPEP 614
Cdd:PHA03247  281 PPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTW 359

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  615 TTPKEPEPTTLKEPEPttPKEPEPTTTKEpesTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkEPEP 694
Cdd:PHA03247  360 TPPSSLEDLSAGRHHP--KRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVP------ASAP 428

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  695 TTPKEPEPTtpkePEPTTPKKPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEP-TTRKEPEPTT 760
Cdd:PHA03247  429 PPPATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALDAlRERRPPEPPG 487
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 457-698 4.78e-09

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 60.33  E-value: 4.78e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  457 PKEPEPTTPKEPEPTTPKepePTTPKEPEPTTLKEPEPTTPKEPEPTTP-------KEPEPTTPKEPEPTTPKEPEPTTP 529
Cdd:PLN03209  328 VPPKESDAADGPKPVPTK---PVTPEAPSPPIEEEPPQPKAVVPRPLSPytayedlKPPTSPIPTPPSSSPASSKSVDAV 404

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  530 KEP-EPTTPKEPEPTT---PKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTLKepEPTTPKEPEPTTPKE 603
Cdd:PLN03209  405 AKPaEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS--TSSVPAVPDTAPATA 482

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  604 PEPTTLKEPEPTTPKEPEPTTLKEPEPTTpkePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-- 681
Cdd:PLN03209  483 ATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSPyt 559

                         250
                  ....*....|....*..
gi 161086926  682 KEPEPTTPKEPEPTTPK 698
Cdd:PLN03209  560 MYEDLKPPTSPTPSPVL 576
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
653-742 5.84e-09

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 60.58  E-value: 5.84e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  653 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKKPEPTTPKEPEPTTPkep 732
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  733 ePTTPKEPEP 742
Cdd:PRK15313  629 -PITEHQFRP 637
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
493-582 6.80e-09

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 60.20  E-value: 6.80e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  493 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPkep 572
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDPD-PVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  573 ePTTPKEPEP 582
Cdd:PRK15313  629 -PITEHQFRP 637
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
534-737 8.30e-09

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 59.89  E-value: 8.30e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  534 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPTTLKEPE 613
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA---RRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  614 PTTPKEPEPTTlkepePTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKE 691
Cdd:PRK12323  452 PAPAAAPAAAA-----RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESI 526

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 161086926  692 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE--PTTPKEPEPTTP 737
Cdd:PRK12323  527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 462-776 8.58e-09

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 59.59  E-value: 8.58e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   462 PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTTPKE 539
Cdd:pfam17823  115 LAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAAsaPHAASPAPRTAASSTTAASSTTAASSA 194

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   540 PEPTTPKEPEPTTPKEPEPTTPK---EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 616
Cdd:pfam17823  195 PTTAASSAPATLTPARGISTAATatgHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGD 274

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   617 PKEPEPTTLKE-PEPTTPKEPEPTTTKEPESTTRKepepTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEP 694
Cdd:pfam17823  275 PHARRLSPAKHmPSDTMARNPAAPMGAQAQGPIIQ----VSTDQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLAVVTT 350

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   695 TTPKEPEPTTPKEPEPTTPKKPE-----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 769
Cdd:pfam17823  351 TKAQAKEPSASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPKTLAM 430


                   ....*..
gi 161086926   770 KEPEPTT 776
Cdd:pfam17823  431 ASCQLST 437
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
454-652 1.07e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 59.50  E-value: 1.07e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  454 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 533
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAA---PAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  534 PTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTPKEPEPTT 608
Cdd:PRK12323  452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 161086926  609 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 652
Cdd:PRK12323  532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
661-750 1.30e-08

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 59.43  E-value: 1.30e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  661 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKKPEPTTPKEPEPTTPKEPEPTTPkep 740
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  741 ePTTPKEPEP 750
Cdd:PRK15313  629 -PITEHQFRP 637
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 513-683 1.40e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 59.11  E-value: 1.40e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  513 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 592
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  593 PKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLkePEPTTPKEPEPTTTKEPESTtrKEPEPTTPKEPEP--TTPKEPEP 670
Cdd:PRK07994  438 AKKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKalEHEKTPEL 512

                         170
                  ....*....|...
gi 161086926  671 TTPKEPEPTTPKE 683
Cdd:PRK07994  513 AAKLAAEAIERDP 525
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
550-745 1.43e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 59.12  E-value: 1.43e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  550 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlKEPE 629
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP-PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  630 PTTPKEPEPTT---TKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTT 704
Cdd:PRK12323  452 PAPAAAPAAAArpaAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 161086926  705 PKEPEPTTPKKPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTP 745
Cdd:PRK12323  532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
486-697 1.45e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 59.12  E-value: 1.45e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  486 PTTLKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 565
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  566 PTTPKEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTTKE 643
Cdd:PRK12323  452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESI 526

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 161086926  644 PESTTRKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPkepePTTPKEPEPTTP 697
Cdd:PRK12323  527 PDPATADPDDAFETLAPAPAAA--PAPRAAAATEPVVA----PRPPRASASGLP 574
rne PRK10811
ribonuclease E; Reviewed
 502-673 1.50e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 59.28  E-value: 1.50e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  502 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkEPE 581
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHP-EVI 920

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  582 PTTLKEPEPTTPKEPEPTTPKEPEpttlkEPEPTTPKEPEPTTLKEPEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEP 660
Cdd:PRK10811  921 AAPVTEQPQVITESDVAVAQEVAE-----HAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVT 995

                         170
                  ....*....|...
gi 161086926  661 EPTTPKEPEPTTP 673
Cdd:PRK10811  996 AVEPEVAPAQVPE 1008
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
452-627 1.64e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 58.82  E-value: 1.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 531
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  532 ---------PEPTT------------------------------------------------------PKEPEPTTPKEP 548
Cdd:PRK14948  444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  549 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE 627
Cdd:PRK14948  524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTA---TQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEEIDK 599
Aim21 pfam11489
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in ...
 465-746 1.67e-08

Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in yeasts. Saccharomyces cerevisiae Aim21 may be involved in mitochondrial migration along actin filament. It may also interact with ribosomes.


Pssm-ID: 371558 [Multi-domain]  Cd Length: 677  Bit Score: 58.83  E-value: 1.67e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   465 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTpKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPT 543
Cdd:pfam11489  288 PSSPAPQSSSASPSGESGEEERDWYEEPILAS-DEVAKEPAGEEPAVSPSFEREEIVKyEVKSRTESVPESREESKIASI 366

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   544 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPT 623
Cdd:pfam11489  367 HGSVPSLARHTPLEDVEEYEPLFPEDDSEGAVKKPTEESSRFKRPELNHRFPSEDVWEDSPSSLQL-TATVSTPSNPPPR 445

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   624 TLKEPEPTTPKEPEPTTTKePESTTRKEPEPTTPKEPEPTTPKEP-------------EPTTPKEPEPTTPKEPEpttpK 690
Cdd:pfam11489  446 AFETPEQETSSSSSEPSLD-DQSELKSEDVKERPEVKAQRFPSRDvwedapesqelvtTVETPDEVKSTSPGVPT----K 520

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   691 EPEPTTPKEPEPTTPKEPE--PTTPKKPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPK 746
Cdd:pfam11489  521 PAIPARPKSGKPTSPTEKRkpPPVPKKPKPQIPARPAkAQPQQAGEEFKPKPRVPARPG 579
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 593-763 1.73e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 58.72  E-value: 1.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  593 PKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP--KEPEP 670
Cdd:PRK07994  361 PAAPLPEPEVPPQSAA-----PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGA 435

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  671 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPepttPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEP 748
Cdd:PRK07994  436 TKAKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTP 510

                         170
                  ....*....|....*
gi 161086926  749 EPTTRKEPEPTTPKE 763
Cdd:PRK07994  511 ELAAKLAAEAIERDP 525
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 577-755 2.07e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 58.72  E-value: 2.07e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  577 PKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 656
Cdd:PRK07994  361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  657 PKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEpeptt 736
Cdd:PRK07994  438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507

                         170
                  ....*....|....*....
gi 161086926  737 pKEPEPTTPKEPEPTTRKE 755
Cdd:PRK07994  508 -KTPELAAKLAAEAIERDP 525
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 561-739 2.45e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 58.34  E-value: 2.45e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  561 PKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 640
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  641 TKEPESTTRKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkKPEPTT 720
Cdd:PRK07994  438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKAL------KKALEH 506

                         170
                  ....*....|....*....
gi 161086926  721 PKEPEPTTPKEPEPTTPKE 739
Cdd:PRK07994  507 EKTPELAAKLAAEAIERDP 525
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 529-699 2.52e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 58.34  E-value: 2.52e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTP--KEPEP 606
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATA-APTAAVAPPQAPAVPPPPASAPQQAPAV----PLPETTSQLLAARQQlqRAQGA 435

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  607 TTLKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTTkePESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEP--TTPKEP 684
Cdd:PRK07994  436 TKAKKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKalEHEKTP 510

                         170
                  ....*....|....*
gi 161086926  685 EPTTPKEPEPTTPKE 699
Cdd:PRK07994  511 ELAAKLAAEAIERDP 525
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 459-601 2.84e-08

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 57.08  E-value: 2.84e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  459 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTLKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 534
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  535 ttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP---KEPEPTTP 601
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
rne PRK10811
ribonuclease E; Reviewed
 448-644 2.89e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 58.51  E-value: 2.89e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  448 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPT 527
Cdd:PRK10811  848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHPEVIAAP 923

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  528 TPKEPEPTTpkepEPTTPKEPEptTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTPKEPep 606
Cdd:PRK10811  924 VTEQPQVIT----ESDVAVAQE--VAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVT-- 995

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 161086926  607 ttlKEPEPTTPKEPEPTTLKEPEPTTP--KEPEPTTTKEP 644
Cdd:PRK10811  996 ---AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 500-588 3.05e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 58.36  E-value: 3.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  500 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttPKE 579
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA---AVE 114


                  ....*....
gi 161086926  580 PEPTTLKEP 588
Cdd:PRK12270  115 DEVTPLRGA 123
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
677-758 3.11e-08

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 58.27  E-value: 3.11e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  677 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTP----KEPEPTT 752
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPdigqSDTPPIT 631


                  ....*.
gi 161086926  753 RKEPEP 758
Cdd:PRK15313  632 EHQFRP 637
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
693-777 3.13e-08

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 58.27  E-value: 3.13e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  693 EPTTPKEPEPTTPKEPEPTTPKkpepttPKEPEPTTPKEPEPTTPKepepttPKEPEPTtrkEPEPTTPKEPEPTTPKEP 772
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPD------PVDPDPV---DPEPVDPVIPDPTIPDIG 623


                  ....*
gi 161086926  773 EPTTP 777
Cdd:PRK15313  624 QSDTP 628
Atrophin-1 pfam03154
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
 455-785 3.27e-08

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.


Pssm-ID: 460830 [Multi-domain]  Cd Length: 991  Bit Score: 58.24  E-value: 3.27e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   455 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT--TPKE 531
Cdd:pfam03154  197 AGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQtPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSlhGQMP 276

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   532 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT----PKEPEPTTPKE 603
Cdd:pfam03154  277 PMPhslqTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPReqplPPAPLSMPHIK 356

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   604 PEPTTLKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 681
Cdd:pfam03154  357 PPPTTPIPQLPNPQSHKHPPHLSGPSPfqMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQ 436

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   682 KEPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTPKKPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPT 759
Cdd:pfam03154  437 SQSLPPPAASHPPTSGLHQVPSQSPFPQhPFVPGGPPPITPPSgPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPP 516

                          330       340
                   ....*....|....*....|....*..
gi 161086926   760 TP-KEPEPTTPKEPEPTTPkkpEPTTT 785
Cdd:pfam03154  517 VQiKEEALDEAEEPESPPP---PPRSP 540
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 668-747 3.61e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 57.98  E-value: 3.61e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  668 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 747
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 605-824 3.69e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 57.80  E-value: 3.69e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  605 EPTTLKEPEPTTPKEPepTTLKEPEPTtpkePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 684
Cdd:PRK08691  373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  685 EPTTPKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEpepttpkEPEPTTRKEPEPTTPKEP 764
Cdd:PRK08691  447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPND-------EAVETETFAHEAPAEPFY 518

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  765 EPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDD 824
Cdd:PRK08691  519 GYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFSTE 578
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 507-657 3.74e-08

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 56.70  E-value: 3.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  507 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 582
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  583 ttlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPestTRKEPEPTTP 657
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPA--APEAEEPARPEPPPAPKP---KRRRRRASVP 334
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
461-550 3.74e-08

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 57.89  E-value: 3.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  461 EPTTPKEPEPTTPKEPEPTTPkepEPTtlkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 540
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIP---DPV---DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  541 ePTTPKEPEP 550
Cdd:PRK15313  629 -PITEHQFRP 637
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
469-558 3.74e-08

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 57.89  E-value: 3.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  469 EPTTPKEPEPTTPKEPEPTTlkePEPTtpkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 548
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVI---PDPV---DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  549 ePTTPKEPEP 558
Cdd:PRK15313  629 -PITEHQFRP 637
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 628-774 3.80e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 57.57  E-value: 3.80e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  628 PEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 704
Cdd:PRK07994  366 PEPEVPPQSaAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAA 445

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  705 PKEPEPtTPKKPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTtrKEPEPTTPKEPEPTTPKEPEP 774
Cdd:PRK07994  446 ASRARP-VNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 660-739 4.07e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 57.98  E-value: 4.07e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  660 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 739
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 616-769 4.16e-08

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 56.70  E-value: 4.16e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  616 TPKEPEPTTLKEPEPTTPKEPEPTTTKE---PESTTRKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKE 691
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  692 PEPTTPKEPEPttpkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTT 768
Cdd:NF040712  258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333


                  .
gi 161086926  769 P 769
Cdd:NF040712  334 P 334
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 545-713 4.21e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 57.57  E-value: 4.21e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 624
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  625 LKEPEPTTPKEPEPTTTkEPESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 702
Cdd:PRK07994  438 AKKSEPAAASRARPVNS-ALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512

                         170
                  ....*....|.
gi 161086926  703 TTPKEPEPTTP 713
Cdd:PRK07994  513 AAKLAAEAIER 523
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
492-678 4.21e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 57.67  E-value: 4.21e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  492 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 571
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  572 ---------PEPTTPK-----------EPEPTTL------------KEPEPTTP---------------KEPEPTTPKEP 604
Cdd:PRK14948  444 lwqqilaklELPSTRMllsqqaelvslDSNRAVIavspnwlgmvqsRKPLLEQAfakvlgrsiklnlesQSGSASNTAKT 523

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  605 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKePEPTTPKEPEP 678
Cdd:PRK14948  524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 457-730 4.33e-08

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 57.65  E-value: 4.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  457 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 536
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  537 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 616
Cdd:NF033845  621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 700

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  617 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 696
Cdd:NF033845  701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780

                         250       260       270
                  ....*....|....*....|....*....|....
gi 161086926  697 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 730
Cdd:NF033845  781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
Atrophin-1 pfam03154
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
 454-820 4.67e-08

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.


Pssm-ID: 460830 [Multi-domain]  Cd Length: 991  Bit Score: 57.85  E-value: 4.67e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   454 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkepePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 533
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSP-------ATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPM 252

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   534 PTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPE 613
Cdd:pfam03154  253 TQ-PPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPP-QPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPS 330

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   614 PTTPKEPEPTTlKEPEPTTPKePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 693
Cdd:pfam03154  331 QSQLQSQQPPR-EQPLPPAPL-SMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPP 408

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   694 PTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttrkePEPTTPKEPEPTTPKE-P 772
Cdd:pfam03154  409 SAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFP-------QHPFVPGGPPPITPPSgP 481

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*...
gi 161086926   773 EPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASE 820
Cdd:pfam03154  482 PTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEE 529
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
451-710 4.77e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 57.55  E-value: 4.77e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 530
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPA-PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAD 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  531 EPEPTTPKePEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlk 610
Cdd:PRK07003  438 RGDDAADG-DAPVPAKANARASADSRCD--ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA---- 510

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  611 EPEPTTPKEPEPTTLKEPEPTTPkEPEPTTTKEPE-------------------STTRKEPEPTTPKePEPTTPKEPEPT 671
Cdd:PRK07003  511 RAPAAASREDAPAAAAPPAPEAR-PPTPAAAAPAAraggaaaaldvlrnagmrvSSDRGARAAAAAK-PAAAPAAAPKPA 588

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 161086926  672 TPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 710
Cdd:PRK07003  589 APRVAVQVpTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
510-721 5.38e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 57.19  E-value: 5.38e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  510 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE 589
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  590 PTTPKEPEPTTP---KEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPK 666
Cdd:PRK12323  452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPA------PAQPDAAPAGWVAES 525

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  667 EPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPkepePTTPKKPEPTTP 721
Cdd:PRK12323  526 IPDPATADPDDAFETLAPAPAAA--PAPRAAAATEPVVA----PRPPRASASGLP 574
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 633-775 5.48e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 57.18  E-value: 5.48e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  633 PKEPEPTTTKEPESTTrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 712
Cdd:PRK07994  361 PAAPLPEPEVPPQSAA---PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  713 PKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTT----PKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 775
Cdd:PRK07994  438 AKKSEPAAASRARP-VNSALERLASVRPAPSAlekaPAKKEAYRWKATNPVEVKKEPVATPKALKKA 503
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 549-766 5.71e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 57.03  E-value: 5.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  549 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP 628
Cdd:PRK08691  373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  629 EPTTPKepeptttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE 707
Cdd:PRK08691  447 AGTAQT---------SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPF 517

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  708 PEPTTPKKPEPttPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTRKEPEptTPKEPEP 766
Cdd:PRK08691  518 YGYGFPDNDCP--PEDGAEIPPPDWEHAAPADTaGGGADEEAEAGGIGGNN--TPSAPPP 573
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
566-769 5.90e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 57.19  E-value: 5.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  566 PTTPKEPEPTTPKEPEPTTLKEPEPTTPkepEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 645
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  646 STTRKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKKPEPTT 720
Cdd:PRK12323  452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 161086926  721 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtrkepePTTPKEPEPTTP 769
Cdd:PRK12323  532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVA------PRPPRASASGLP 574
rne PRK10811
ribonuclease E; Reviewed
 510-684 6.45e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 57.36  E-value: 6.45e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  510 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTLKEP 588
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAP 923

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  589 EPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTtpkepEPTTTKEPESTTrkepEPTTPKEPEPTTPKEP 668
Cdd:PRK10811  924 VTEQPQVITESDVAVAQEVA-EHAEPVVEPQDETADIEEAAET-----AEVVVAEPEVVA----QPAAPVVAEVAAEVET 993

                         170
                  ....*....|....*.
gi 161086926  669 EPTTPKEPEPTTPKEP 684
Cdd:PRK10811  994 VTAVEPEVAPAQVPEA 1009
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
449-624 6.65e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 56.81  E-value: 6.65e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  449 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPE 525
Cdd:PRK12323  391 APAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARpaaAGPR 470

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  526 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 603
Cdd:PRK12323  471 PVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPA 550

                         170       180
                  ....*....|....*....|...
gi 161086926  604 PEPTTLKEPE--PTTPKEPEPTT 624
Cdd:PRK12323  551 PRAAAATEPVvaPRPPRASASGL 573
rne PRK10811
ribonuclease E; Reviewed
 542-732 7.71e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 56.97  E-value: 7.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  542 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPepttlkePEPTTPKEPE 621
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQP-------EEVVVVETTH 916

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  622 PTTLKEPEPTTPKEPEPTTTKEPESTTRkEPEPTTPKEPEPTTPKEPEPTT---PKEPEP-TTPKEPEPTTPKEPEPTTP 697
Cdd:PRK10811  917 PEVIAAPVTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVvAQPAAPVVAEVAAEVETVT 995

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 161086926  698 KEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTPKEP 732
Cdd:PRK10811  996 AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 452-603 7.71e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 56.80  E-value: 7.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKE 531
Cdd:PRK07994  385 AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARP-VNSALERLASVR 463

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  532 PEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepttlKEPEPTTPKEPEPTTPKE 603
Cdd:PRK07994  464 PAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE------KTPELAAKLAAEAIERDP 525
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
453-534 7.76e-08

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 57.12  E-value: 7.76e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  453 EPTTPKEPEPTTPKEPEPTTPK--EPEPTTPKEPEPtTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPK 530
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPDpvDPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP----PITEH 633


                  ....
gi 161086926  531 EPEP 534
Cdd:PRK15313  634 QFRP 637
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 521-691 7.91e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 56.80  E-value: 7.91e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  521 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 600
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  601 PKEPEPTTLKEPEPtTPKEPEPTTLKEPEPTTPkEPEPtttKEPESTTRKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 678
Cdd:PRK07994  438 AKKSEPAAASRARP-VNSALERLASVRPAPSAL-EKAP---AKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512

                         170
                  ....*....|...
gi 161086926  679 TTPKEPEPTTPKE 691
Cdd:PRK07994  513 AAKLAAEAIERDP 525
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
473-646 8.87e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 56.51  E-value: 8.87e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  473 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 552
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  553 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 569
Cdd:PRK14948  441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  570 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPES 646
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTA-TQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEE 596
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 601-777 9.47e-08

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 56.41  E-value: 9.47e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  601 PKEPEPTTLKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 680
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  681 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKKPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEpeptt 760
Cdd:PRK07994  438 AKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507

                         170
                  ....*....|....*..
gi 161086926  761 pKEPEPTTPKEPEPTTP 777
Cdd:PRK07994  508 -KTPELAAKLAAEAIER 523
PHA03247 PHA03247
large tegument protein UL36; Provisional
 542-776 9.56e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.87  E-value: 9.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  542 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkepePTTPKEPEPTtlkEPEPTTPKEPE 621
Cdd:PHA03247  255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAP----LALPAPPDPP---PPAPAGDAEEE 327

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  622 PTTLKEPEPTTPKePEPTTTKEPESTTRKEPEPTTPKEPEPTT------PKEPEPTTPKEPEPTTpKEPEPTTPKEPEPT 695
Cdd:PHA03247  328 DDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhpKRASLPTRKRRSARHA-ATPFARGPGGDDQT 405

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  696 TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPT-TPKEPE-PTTPKEPEPTTPkePEPTTRKEPEPTTPKEPEP-TTPKEP 772
Cdd:PHA03247  406 RPAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAP--ATEPAPDDPDDATRKALDAlRERRPP 483


                  ....
gi 161086926  773 EPTT 776
Cdd:PHA03247  484 EPPG 487
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 652-731 9.64e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 56.82  E-value: 9.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  652 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 731
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
NESP55 pfam06390
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ...
 532-702 9.92e-08

Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.


Pssm-ID: 115071 [Multi-domain]  Cd Length: 261  Bit Score: 54.87  E-value: 9.92e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   532 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLK 610
Cdd:pfam06390   81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   611 EPEPTTPKE--PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPT 687
Cdd:pfam06390  161 PKGATFHQSltERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEeEEEKEEEKQQPHRCKPKKPA 240

                          170
                   ....*....|....*
gi 161086926   688 TPKEPEPTTPKEPEP 702
Cdd:pfam06390  241 RRRDPSPESPPKKGA 255
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 676-751 1.17e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 56.44  E-value: 1.17e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  676 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 751
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
462-681 1.21e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 56.04  E-value: 1.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  462 PTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 541
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAA---PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  542 PTTPKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkepEPTTPKEPE 621
Cdd:PRK12323  452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP------AQPDAAPAG 520

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  622 PTTLKEPEPTTPKEPEPTTTKEPESTTrkEPEPTTPKEPEPTTPkepePTTPKEPEPTTP 681
Cdd:PRK12323  521 WVAESIPDPATADPDDAFETLAPAPAA--APAPRAAAATEPVVA----PRPPRASASGLP 574
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 492-571 1.31e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 56.44  E-value: 1.31e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  492 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 571
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 576-729 1.31e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 55.16  E-value: 1.31e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  576 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPepttlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT 655
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGV 252

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  656 TPKEPEPTTP-----KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP---KEPEPT 727
Cdd:NF040712  253 EQPEDEPVGPgaapaAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRAS 332


                  ..
gi 161086926  728 TP 729
Cdd:NF040712  333 VP 334
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
477-566 1.33e-07

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 56.35  E-value: 1.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  477 EPTTPKEPEPTTLKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 556
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  557 ePTTPKEPEP 566
Cdd:PRK15313  629 -PITEHQFRP 637
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
517-606 1.33e-07

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 56.35  E-value: 1.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  517 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTLKEPEPTTPkep 596
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  597 ePTTPKEPEP 606
Cdd:PRK15313  629 -PITEHQFRP 637
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 480-633 1.41e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 55.16  E-value: 1.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  480 TPKEPEPTTLKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKE 555
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  556 PEPTTPKEPEPttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTL---KEPEPTT 632
Cdd:NF040712  258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333


                  .
gi 161086926  633 P 633
Cdd:NF040712  334 P 334
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 473-746 1.51e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 56.11  E-value: 1.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  473 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 552
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  553 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTT 632
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  633 PKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 712
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  713 PKKPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPK 746
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 537-707 1.59e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 55.64  E-value: 1.59e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  537 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 616
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  617 PKEPEPTTLKEPEPtTPKEPEPTTTKEPESTTRKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 694
Cdd:PRK07994  438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512

                         170
                  ....*....|...
gi 161086926  695 TTPKEPEPTTPKE 707
Cdd:PRK07994  513 AAKLAAEAIERDP 525
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 497-770 1.60e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 55.73  E-value: 1.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  497 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 576
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  577 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 656
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  657 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 736
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  737 PKEPEPTTPKEPEPTTRKEPEPTTP--KEPEPTTPK 770
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 493-702 1.61e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 55.87  E-value: 1.61e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  493 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 572
Cdd:PRK08691  373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  573 EPTTPKePEPTTLKEPEPTTPKEPEPTTPKEPEpttlKEPEPTTPKEPEPTtlkePEPTTP-KEPEPTTTKEPESTTRKE 651
Cdd:PRK08691  447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAAD----NETDAPLSEVPSEN----PIQATPnDEAVETETFAHEAPAEPF 517

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  652 PEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEP----EPTTPKEPEP 702
Cdd:PRK08691  518 YGYGFPDNDCPPEDGAEIPPPDWEhAAPADTAGGGADEEAEAggigGNNTPSAPPP 573
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 465-738 1.95e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 55.73  E-value: 1.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  465 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 544
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 624
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  625 LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 704
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  705 PKEPEPTTPKKPEPTTPKEPEPTTP--KEPEPTTPK 738
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
rne PRK10811
ribonuclease E; Reviewed
 590-745 2.01e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 55.43  E-value: 2.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  590 PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP----EPTTTKEPESTTRKEPEPTTPKEPEPTTP 665
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAevveEPVVVAEPQPEEVVVVETTHPEVIAAPVT 925

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  666 KEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 742
Cdd:PRK10811  926 EQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005


                  ...
gi 161086926  743 TTP 745
Cdd:PRK10811 1006 VPE 1008
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 600-761 2.21e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 54.39  E-value: 2.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  600 TPKEPEPTTLKEPEPTTPKEPEPTTLKE---PEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPKEPEPTTPKE 675
Cdd:NF040712  178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  676 PEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKepeptTRKE 755
Cdd:NF040712  258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKP-----KRRR 328


                  ....*.
gi 161086926  756 PEPTTP 761
Cdd:NF040712  329 RRASVP 334
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 678-773 2.33e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 55.20  E-value: 2.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  678 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKE-P 756
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*..
gi 161086926  757 EPTTPKEPEPTTPKEPE 773
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEE 454
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 505-778 2.60e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 55.34  E-value: 2.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  505 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 584
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  585 LKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT 664
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  665 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 744
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 161086926  745 PKEPEPTTRKEPEPTTPKEPEPTTP--KEPEPTTPK 778
Cdd:NF033845  779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
Atrophin-1 pfam03154
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
 468-776 3.12e-07

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.


Pssm-ID: 460830 [Multi-domain]  Cd Length: 991  Bit Score: 55.16  E-value: 3.12e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   468 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPK 546
Cdd:pfam03154  146 PSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPnQTQSTA 225

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   547 EPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLK 626
Cdd:pfam03154  226 APHTLIQQTPTLHPQRLPSPHPPLQPMT----QPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLT 301

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   627 EPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPepttpkepepTTPKEPEPTTPKEPEPTTPKEPEPTTPK 706
Cdd:pfam03154  302 PQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQ----------PLPPAPLSMPHIKPPPTTPIPQLPNPQS 371

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926   707 EPEPTTPKKPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTT 776
Cdd:pfam03154  372 HKHPPHLSGPSPfqMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPP 443
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 451-593 3.12e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 54.00  E-value: 3.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 526
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  527 ttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTL---KEPEPTTP 593
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
652-726 3.17e-07

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 54.81  E-value: 3.17e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  652 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkkpePTTPKEPEP 726
Cdd:PRK15313  566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 636-714 3.23e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 54.90  E-value: 3.23e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  636 PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 714
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
rne PRK10811
ribonuclease E; Reviewed
 566-756 3.48e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 54.66  E-value: 3.48e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  566 PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEpepTTTKEPE 645
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVE---TTHPEVI 920

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  646 STTRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTtpkepEPTTPKEPEP-TTPKEPEPTTPKKPEPTTP 721
Cdd:PRK10811  921 AAPVTEQPQVITESDVAVaqeVAEHAEPVVEPQDETADIEEAAET-----AEVVVAEPEVvAQPAAPVVAEVAAEVETVT 995

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 161086926  722 KEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTRKEP 756
Cdd:PRK10811  996 AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
481-654 3.60e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 54.58  E-value: 3.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  481 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 560
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  561 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 577
Cdd:PRK14948  441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  578 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 654
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPT---PPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594
rne PRK10811
ribonuclease E; Reviewed
 494-659 3.79e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 54.66  E-value: 3.79e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  494 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEP 572
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAP 923

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  573 EPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTT---PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 649
Cdd:PRK10811  924 VTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVA 1002

                         170
                  ....*....|
gi 161086926  650 KEPEPTTPKE 659
Cdd:PRK10811 1003 PAQVPEATVE 1012
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 484-563 3.93e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 54.90  E-value: 3.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  484 PEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 563
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 654-749 4.14e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 54.43  E-value: 4.14e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  654 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE-P 732
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*..
gi 161086926  733 EPTTPKEPEPTTPKEPE 749
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEE 454
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 450-722 4.55e-07

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 54.57  E-value: 4.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 529
Cdd:NF033845  544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSD 619

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  530 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 609
Cdd:NF033845  620 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 699

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  610 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 689
Cdd:NF033845  700 DSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 779

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 161086926  690 KEPEPTTPKEPEPTTPKEPEPTTPKKPE--PTTPK 722
Cdd:NF033845  780 SDSDSDSDSDSDSDSDSDSRVTPPNNEQkaPSNPK 814
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 468-557 4.63e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 54.05  E-value: 4.63e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  468 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTP 545
Cdd:PRK14950  366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442

                          90
                  ....*....|..
gi 161086926  546 KEPEPTTPKEPE 557
Cdd:PRK14950  443 KYTPPAPPKEEE 454
DUF4045 pfam13254
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...
 598-766 4.91e-07

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.


Pssm-ID: 433066 [Multi-domain]  Cd Length: 415  Bit Score: 53.63  E-value: 4.91e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   598 PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEStTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 677
Cdd:pfam13254  197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLS-TDKEQSPAPTSASEPPPKTKELPKDSEEPA 275

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   678 PTTPKEPEPTTPKEPEptTPKEPEPTTPKEPEPTTPKKPEPTTPKepePTTPKEPEPTTPKEPEPTTPKEPEPTTRK-EP 756
Cdd:pfam13254  276 APSKSAEASTEKKEPD--TESSPETSSEKSAPSLLSPVSKASIDK---PLSSPDRDPLSPKPKPQSPPKDFRANLRSrEV 350

                          170
                   ....*....|
gi 161086926   757 EPTTPKEPEP 766
Cdd:pfam13254  351 PKDKSKKDEP 360
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
491-742 4.94e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 54.09  E-value: 4.94e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  491 EPEPT----TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 566
Cdd:PRK07003  359 EPAVTgggaPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  567 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkEPES 646
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA----RAPA 514

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  647 TTRKEPEPTTPKEPEPTTPkEPEPTTPKEP------------------EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 708
Cdd:PRK07003  515 AASREDAPAAAAPPAPEAR-PPTPAAAAPAaraggaaaaldvlrnagmRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVA 593

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 161086926  709 EPT-TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 742
Cdd:PRK07003  594 VQVpTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
612-774 4.98e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 54.20  E-value: 4.98e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  612 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE------ 685
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPslnlee 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  686 -----------PTT------------------------------------------------------PKEPEPTTPKEP 700
Cdd:PRK14948  444 lwqqilaklelPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  701 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKePEPTTPKEPEP 774
Cdd:PRK14948  524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 593-755 5.11e-07

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 53.83  E-value: 5.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  593 PKEPEPTT-PKEPEPTTLKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP----K 666
Cdd:PRK13108  295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdierE 374

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  667 EPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpepTTPKEPEPTTPKEPEPtTPKEPEPTTP 745
Cdd:PRK13108  375 QPGDLAGQAPAaHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPI----PDPAKPDELAVAGPGD-DPAEPDGIRR 449

                         170
                  ....*....|
gi 161086926  746 KEPEPTTRKE 755
Cdd:PRK13108  450 QDDFSSRRRR 459
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 692-771 5.28e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 54.13  E-value: 5.28e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  692 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE 771
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 468-547 5.37e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 54.13  E-value: 5.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  468 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 547
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 700-778 5.46e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 54.13  E-value: 5.46e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  700 PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 778
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 628-707 6.10e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 54.13  E-value: 6.10e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  628 PEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 707
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 485-694 6.36e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 53.94  E-value: 6.36e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  485 EPTTLKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 560
Cdd:PRK08691  373 ENTELQSPSAQTAEKE--TAAKKPQPRPEAETAQTPVQTASaaamPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTA 450

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  561 PKePEPTTPKEPEPTTPKEPEPTTLKEPEpttpKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 640
Cdd:PRK08691  451 QT-SAKSIQTASEAETPPENQVSKNKAAD----NETDAPLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGYGFPDN 525

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 161086926  641 TKEPESTTRKEPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEptTPKEPEP 694
Cdd:PRK08691  526 DCPPEDGAEIPPPDWEHAAPADTAGGGAD----EEAEAGGIGGNN--TPSAPPP 573
rne PRK10811
ribonuclease E; Reviewed
 614-777 7.04e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 53.89  E-value: 7.04e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  614 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPE 693
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHPEVIA 921

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  694 PTTPKEPEPTTPKEP--EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTRKEPEPTTPKEPEPTTPK 770
Cdd:PRK10811  922 APVTEQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEV 1001


                  ....*..
gi 161086926  771 EPEPTTP 777
Cdd:PRK10811 1002 APAQVPE 1008
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 516-612 7.79e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.74  E-value: 7.79e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  516 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkepepttpke 595
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA----------- 106

                          90
                  ....*....|....*..
gi 161086926  596 PEPTTPKEPEPTTLKEP 612
Cdd:PRK12270  107 APAAAAVEDEVTPLRGA 123
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 476-555 7.86e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.74  E-value: 7.86e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  476 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 555
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 563-705 8.09e-07

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 52.46  E-value: 8.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  563 EPEPTTPKEPEPTTPKE---PEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPkEPEPT 639
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAG--TPDDLASARRRRAGVEQPEDEPV-GPGAA 265

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  640 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTP 705
Cdd:NF040712  266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
446-611 8.25e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 53.43  E-value: 8.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKE---------P 516
Cdd:PRK14948  374 PANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEElwqqilaklE 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  517 EPTT------------------------------------------------------PKEPEPTTPKEPEPTTPKEPEP 542
Cdd:PRK14948  454 LPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKTPPPPQKSPPP 533

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  543 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKE 611
Cdd:PRK14948  534 PAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSS---PPPPIPEEPTPSPTKDSSPEEIDK 599
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 540-641 8.55e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.74  E-value: 8.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  540 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKE 619
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA---APAAAAVE 114

                          90       100
                  ....*....|....*....|....*..
gi 161086926  620 PEPTTLKEPEPTTPKEPE-----PTTT 641
Cdd:PRK12270  115 DEVTPLRGAAAAVAKNMDaslevPTAT 141
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
563-756 8.72e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 53.31  E-value: 8.72e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  563 EPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTtPKEPEPTTTK 642
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARV-AGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAP-PAAPAPPATA 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  643 EPESTTRKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPK 722
Cdd:PRK07003  437 DRGDDAADGDAPVPAKANARASADSRCD--ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPA 514

                         170       180       190
                  ....*....|....*....|....*....|....
gi 161086926  723 EPepttPKEPEPTTPKEPEPTTPkEPEPTTRKEP 756
Cdd:PRK07003  515 AA----SREDAPAAAAPPAPEAR-PPTPAAAAPA 543
PRK10819 PRK10819
transport protein TonB; Provisional
 460-589 8.89e-07

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 51.61  E-value: 8.89e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  460 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTtpK 538
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPK--R 119

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 161086926  539 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPE 589
Cdd:PRK10819  120 EVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQPQ 169
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 457-778 8.91e-07

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 53.55  E-value: 8.91e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  457 PKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPE-------PTTPKEPEPTTPKEPEPTTP 529
Cdd:PRK10263  366 PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQqpyyapaPEQPAQQPYYAPAPEQPVAG 444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  530 KE---PEPTTPKEPEPTTPKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTT 600
Cdd:PRK10263  445 NAwqaEEQQSTFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLA 524

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  601 P-KEPEPTTLKEPEPTTPKEPEPTTLKEP--EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT----PKEPEPTTP 673
Cdd:PRK10263  525 AwYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSggprPQVKEGIGP 604

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  674 KEPEPTTPKEP-----------------------------------------------------------------EPTT 688
Cdd:PRK10263  605 QLPRPKRIRVPtrrelasygiklpsqraaeekareaqrnqydsgdqynddeidamqqdelarqfaqtqqqrygeqyQHDV 684

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  689 PKEPEPT-----------------------------------------------TPKEP--EPTTPKEPEPTTPKKPEPT 719
Cdd:PRK10263  685 PVNAEDAdaaaeaelarqfaqtqqqrysgeqpaganpfslddfefspmkallddGPHEPlfTPIVEPVQQPQQPVAPQQQ 764

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  720 TPKEPEPTTP----KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 778
Cdd:PRK10263  765 YQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 827
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 492-581 9.42e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 53.27  E-value: 9.42e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  492 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTP 569
Cdd:PRK14950  366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442

                          90
                  ....*....|..
gi 161086926  570 KEPEPTTPKEPE 581
Cdd:PRK14950  443 KYTPPAPPKEEE 454
NESP55 pfam06390
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ...
 612-779 9.57e-07

Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.


Pssm-ID: 115071 [Multi-domain]  Cd Length: 261  Bit Score: 51.79  E-value: 9.57e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   612 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTK-EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 690
Cdd:pfam06390   81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   691 EPEPT---TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKE-PEPTTRKEPEPTTPKEPEP 766
Cdd:pfam06390  161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPE-RGPLDKDPRDPEEeEEEKEEEKQQPHRCKPKKP 239

                          170
                   ....*....|...
gi 161086926   767 TTPKEPEPTTPKK 779
Cdd:pfam06390  240 ARRRDPSPESPPK 252
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 640-723 9.71e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.36  E-value: 9.71e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  640 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 719
Cdd:PRK12270   34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113


                  ....
gi 161086926  720 TPKE 723
Cdd:PRK12270  114 EDEV 117
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 652-741 9.75e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 52.89  E-value: 9.75e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  652 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKE-PEPTTP 729
Cdd:PRK14950  366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442

                          90
                  ....*....|..
gi 161086926  730 KEPEPTTPKEPE 741
Cdd:PRK14950  443 KYTPPAPPKEEE 454
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 454-549 1.02e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 52.89  E-value: 1.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  454 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-P 532
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*..
gi 161086926  533 EPTTPKEPEPTTPKEPE 549
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEE 454
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 531-673 1.10e-06

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 52.08  E-value: 1.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  531 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTLKEPEPTTPKEPEPTTPkEPEPT 607
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPV-GPGAA 265

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  608 TLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP---KEPEPTTP 673
Cdd:NF040712  266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 460-539 1.10e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.36  E-value: 1.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  460 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 539
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 684-763 1.12e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.36  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  684 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKE 763
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 662-765 1.15e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 52.89  E-value: 1.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  662 PTTPKEPEPTTPKEPEPTTPKePEPTTpkepePTTPKEPEPTTPKEPEPTTPKKPEPTtpkePEPTTPkePEPTTPKEPE 741
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT-PAPST-----RPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAP 429

                          90       100
                  ....*....|....*....|....*
gi 161086926  742 PTTPKE-PEPTTRKEPEPTTPKEPE 765
Cdd:PRK14950  430 KLTRAAiPVDEKPKYTPPAPPKEEE 454
NESP55 pfam06390
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ...
 492-662 1.19e-06

Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.


Pssm-ID: 115071 [Multi-domain]  Cd Length: 261  Bit Score: 51.40  E-value: 1.19e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   492 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 568
Cdd:pfam06390   81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAptTEPETEPEDEPGPVV 160

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   569 PKEPEPTTPKEPEPTTLKEPEP-TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 647
Cdd:pfam06390  161 PKGATFHQSLTERLHALKLQSAdASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240

                          170
                   ....*....|....*
gi 161086926   648 TRKEPEPTTPKEPEP 662
Cdd:pfam06390  241 RRRDPSPESPPKKGA 255
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 634-938 1.24e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 53.15  E-value: 1.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE-- 709
Cdd:PTZ00449  493 KKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGeHEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSki 572

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  710 PTTPKKPEptTPKEPE-PTTPKEP-EPTTPKEPE-PTTPKEPepttrKEPE----PTTPKEPE-PTTPKEPEPTTPKKPE 781
Cdd:PTZ00449  573 PTLSKKPE--FPKDPKhPKDPEEPkKPKRPRSAQrPTRPKSP-----KLPElldiPKSPKRPEsPKSPKRPPPPQRPSSP 645

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  782 PTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPK 861
Cdd:PTZ00449  646 ERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL 725

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  862 TRKPKTTPSPLKTTSATP----ELNTTPLEVMLPTTTIPKQTPNPE--TAEVNPDHEDADGGEGEKPLI-PGPPVLFPTA 934
Cdd:PTZ00449  726 PRDEEFPFEPIGDPDAEQpddiEFFTPPEEERTFFHETPADTPLPDilAEEFKEEDIHAETGEPDEAMKrPDSPSEHEDK 805


                  ....
gi 161086926  935 IPGT 938
Cdd:PTZ00449  806 PPGD 809
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 452-531 1.25e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 52.97  E-value: 1.25e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 531
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
541-617 1.29e-06

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 52.88  E-value: 1.29e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  541 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPtTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 617
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP 628
PRK10819 PRK10819
transport protein TonB; Provisional
 652-768 1.31e-06

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 51.22  E-value: 1.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  652 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 730
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPKREV 121

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 161086926  731 EpepttPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 768
Cdd:PRK10819  122 K-----PVEPRPASPFENTAPARPTSSTATAAASKPVT 154
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 510-605 1.36e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 52.50  E-value: 1.36e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  510 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE-P 588
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*..
gi 161086926  589 EPTTPKEPEPTTPKEPE 605
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEE 454
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 668-775 1.36e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 1.36e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  668 PEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPT 743
Cdd:PRK14951  376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|..
gi 161086926  744 TPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 775
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAAR 487
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 478-573 1.38e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 52.50  E-value: 1.38e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  478 PTTPKEPEPTTLKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-P 556
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*..
gi 161086926  557 EPTTPKEPEPTTPKEPE 573
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEE 454
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
452-526 1.52e-06

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 52.88  E-value: 1.52e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  452 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEP 526
Cdd:PRK15313  566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDPDPV-DPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 490-762 1.54e-06

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 52.64  E-value: 1.54e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  490 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 569
Cdd:NF033845  544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDSD 621

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  570 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 649
Cdd:NF033845  622 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 701

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  650 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 729
Cdd:NF033845  702 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 781

                         250       260       270
                  ....*....|....*....|....*....|...
gi 161086926  730 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 762
Cdd:NF033845  782 SDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
617-779 1.71e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 52.27  E-value: 1.71e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  617 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 696
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  697 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 713
Cdd:PRK14948  441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  714 KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 779
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTP 586
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 569-831 2.13e-06

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 52.26  E-value: 2.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  569 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 648
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  649 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTT 728
Cdd:NF033845  619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  729 PKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEI 808
Cdd:NF033845  699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778

                         250       260
                  ....*....|....*....|....
gi 161086926  809 QNKPEETTPASEDSD-DSKTTLKP 831
Cdd:NF033845  779 DSDSDSDSDSDSDSDsDSDSRVTP 802
NESP55 pfam06390
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ...
 548-734 2.25e-06

Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.


Pssm-ID: 115071 [Multi-domain]  Cd Length: 261  Bit Score: 50.63  E-value: 2.25e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   548 PEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTLKEPEPTTPKEPEptTPKEPEPTTLKEPEPTTPKEPEPTtlKE 627
Cdd:pfam06390   81 PEPSEPESDHEDEDFEPELARPECLE-YDEDDFDTETDSETEPESDIESE--TEFETEPETEPDTAPTTEPETEPE--DE 155

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   628 PEPTTPKEPE-PTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEpttpkEPEPTTPK 706
Cdd:pfam06390  156 PGPVVPKGATfHQSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPE-RGPLDKDPRDPEEEE-----EEKEEEKQ 229

                          170       180
                   ....*....|....*....|....*...
gi 161086926   707 EPEPTTPKKPEPTTPKEPEPTTPKEPEP 734
Cdd:pfam06390  230 QPHRCKPKKPARRRDPSPESPPKKGAIP 257
PHA03247 PHA03247
large tegument protein UL36; Provisional
 460-664 2.49e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 52.25  E-value: 2.49e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  460 PEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--------- 521
Cdd:PHA03247  269 PETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPlprprqhyp 348

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  522 ------KEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 595
Cdd:PHA03247  349 lgfpkrRRPTWTPPSSLEDLSAGRHHP--KRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPV 423

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  596 P--EPTTPKEPEPTtlkePEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRKEPEP-TTPKEPEPTT 664
Cdd:PHA03247  424 PasAPPPPATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALDAlRERRPPEPPG 487
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 500-620 2.50e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 51.64  E-value: 2.50e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  500 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 578
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 161086926  579 EPEPTTLKEPEPTTPkEPEPTTPKEPePTTLKEPEPTTPKEP 620
Cdd:PRK14951  454 QAAPETVAIPVRVAP-EPAVASAAPA-PAAAPAAARLTPTEE 493
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 526-621 2.79e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 51.73  E-value: 2.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  526 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-P 604
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*..
gi 161086926  605 EPTTLKEPEPTTPKEPE 621
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEE 454
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 452-569 2.79e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 51.64  E-value: 2.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTP-KEPEPTTPKepePTTPKEPEPTTLKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 529
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAA---APAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 161086926  530 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 569
Cdd:PRK14951  453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PHA03247 PHA03247
large tegument protein UL36; Provisional
 494-728 3.00e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.86  E-value: 3.00e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  494 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 564
Cdd:PHA03247  255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAM 334

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  565 EPTTPKePEPTT------PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTpKEPEPTTLKEPEPTTPKEPEP 638
Cdd:PHA03247  335 EVVSPL-PRPRQhyplgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVP 412

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  639 TTTKEPESTTRKEPEPTTPKEPEPT-TPKEPE-PTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKKP 716
Cdd:PHA03247  413 ASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAPATE----PAPDDPDDATRKALDALRERRPPEPPGA 488

                         250
                  ....*....|..
gi 161086926  717 EPTTPKEPEPTT 728
Cdd:PHA03247  489 DLAELLGRHPDT 500
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 468-587 3.02e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 51.64  E-value: 3.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  468 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 545
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 161086926  546 KEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKE 587
Cdd:PRK14951  453 AQAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 524-643 3.34e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 51.25  E-value: 3.34e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  524 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPK 602
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 161086926  603 EPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTTKE 643
Cdd:PRK14951  454 QAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 620-699 3.51e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.43  E-value: 3.51e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  620 PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 699
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 652-769 3.93e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 51.25  E-value: 3.93e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  652 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 730
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 161086926  731 EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 769
Cdd:PRK14951  454 QAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 517-726 3.97e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 51.25  E-value: 3.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  517 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 596
Cdd:PRK08691  373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  597 EPTTPKePEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP-ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 675
Cdd:PRK08691  447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPiQATPNDEAVETETFAHEAPAEPFYGYGFPDN 525

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 161086926  676 PEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKKPEPTTPKEPEP 726
Cdd:PRK08691  526 DCP--PEDGAEIPPPDWEHAAPADTAGGGADE-EAEAGGIGGNNTPSAPPP 573
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
557-633 4.44e-06

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 51.34  E-value: 4.44e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  557 EPTTPKEPEPTTPKEPEPTTPkepEPTtlkEPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPTTLKEPEPTTP 633
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIP---DPV---DPDPVDPVIPDPVIPDPVDPDPV-DPEPVDPVIPDPTIPDIGQSDTP 628
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
629-718 4.63e-06

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 50.95  E-value: 4.63e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  629 EPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 708
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPD------PVIPDPVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628

                          90
                  ....*....|
gi 161086926  709 ePTTPKKPEP 718
Cdd:PRK15313  629 -PITEHQFRP 637
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 492-613 4.78e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 50.87  E-value: 4.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  492 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 570
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 161086926  571 EPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPTTLKEPE 613
Cdd:PRK14951  454 QAAPETVAIPVRV---APEPAVASAAPAPAAAPAAARLTPTEE 493
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 651-775 4.87e-06

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 50.15  E-value: 4.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  651 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 726
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 161086926  727 ttpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 775
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEP 313
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 604-729 5.21e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 50.87  E-value: 5.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  604 PEPTTLKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTTKEPesttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 682
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAP-------AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 161086926  683 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 729
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 506-586 5.47e-06

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 47.09  E-value: 5.47e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   506 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTL 585
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116


                   .
gi 161086926   586 K 586
Cdd:pfam05887  117 K 117
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 642-710 5.63e-06

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 47.09  E-value: 5.63e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   642 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 710
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 452-547 5.90e-06

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 50.23  E-value: 5.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 528
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343

                          90
                  ....*....|....*....
gi 161086926  529 PKEPEPTTPKEPEPTTPKE 547
Cdd:COG3266   344 AAAAAPAAPAVAKKLAADE 362
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 550-646 6.08e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 50.58  E-value: 6.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  550 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE-P 628
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*...
gi 161086926  629 EPTTPKEPEPTTTKEPES 646
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEEK 455
NESP55 pfam06390
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ...
 452-626 6.19e-06

Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.


Pssm-ID: 115071 [Multi-domain]  Cd Length: 261  Bit Score: 49.09  E-value: 6.19e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 530
Cdd:pfam06390   81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   531 EPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPT 607
Cdd:pfam06390  161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240

                          170
                   ....*....|....*....
gi 161086926   608 TLKEPEPTTPKEPEPTTLK 626
Cdd:pfam06390  241 RRRDPSPESPPKKGAIPIR 259
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 472-730 6.23e-06

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 50.40  E-value: 6.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  472 TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPtt 544
Cdd:NF033838  228 TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGEETLPSPSLKPEK-- 304

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 pKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE------PTTLKEPEPTTPKEpEPTTPKEPEPttLKEP-EPTTP 617
Cdd:NF033838  305 -KVAEAEKKVEEAKKKAKDQKEEDRRNYPTNTYKTLEleiaesDVKVKEAELELVKE-EAKEPRNEEK--IKQAkAKVES 380

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  618 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPeptTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTT 696
Cdd:NF033838  381 KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEK---PAEQPQPAPAPQPEKPAPKPEKPAeQPKAEKPADQQAEEDYA 457

                         250       260       270
                  ....*....|....*....|....*....|....
gi 161086926  697 PKEPEpttpkEPEPTTPKKPePTTPKEPEPTTPK 730
Cdd:NF033838  458 RRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
613-710 6.39e-06

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 50.57  E-value: 6.39e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  613 EPTTPKEPEPTTLKEPEPTTPkepEPTttkepesttrkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEP 692
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVIP---DPV-----------DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIG 623

                          90
                  ....*....|....*...
gi 161086926  693 EPTTPkepePTTPKEPEP 710
Cdd:PRK15313  624 QSDTP----PITEHQFRP 637
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 530-610 7.16e-06

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 46.71  E-value: 7.16e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   530 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttpkEPEPTTL 609
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116


                   .
gi 161086926   610 K 610
Cdd:pfam05887  117 K 117
PRK10819 PRK10819
transport protein TonB; Provisional
 451-558 7.46e-06

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 48.91  E-value: 7.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTLKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPK 530
Cdd:PRK10819   59 EPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPV-VIPKPEPKPKPKPKPKPKPVKKVEEQPK--REVKPVEPRPASPFENT 135

                          90       100
                  ....*....|....*....|....*...
gi 161086926  531 EPEPTTPKEPEPTTPKePEPTTPKEPEP 558
Cdd:PRK10819  136 APARPTSSTATAAASK-PVTSVSSGPRA 162
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 515-665 8.03e-06

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 49.38  E-value: 8.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  515 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 590
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  591 ttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEpttlkEPEPTTpkePEPTTTKEPESTTRKEPEPTTP---KEPEPTTP 665
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPP-----APAPAA---PAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 632-725 8.42e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 50.19  E-value: 8.42e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  632 TPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PE 709
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPV 438

                          90
                  ....*....|....*.
gi 161086926  710 PTTPKKPEPTTPKEPE 725
Cdd:PRK14950  439 DEKPKYTPPAPPKEEE 454
PHA03247 PHA03247
large tegument protein UL36; Provisional
 449-608 9.50e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 50.32  E-value: 9.50e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  449 RKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 528
Cdd:PHA03247  354 RRRPTWTPPSSLEDLSAGRHHP--KRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPP 430

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  529 PKEPEPTtpkePEPTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEptTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:PHA03247  431 PATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALD--ALRERRPPEPPGADLAELLGRHPDT 500
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 490-558 9.64e-06

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 46.32  E-value: 9.64e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   490 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 558
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 634-702 9.73e-06

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 46.32  E-value: 9.73e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 702
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 660-824 9.84e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 49.86  E-value: 9.84e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  660 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK---KPEPTTPKEPEPTTPKEPEPTT 736
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllAARQQLQRAQGATKAKKSEPAA 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  737 PKEPEPtTPKEPEPTTRKEPEP-TTPKEPEPTTPKEPEPTTPkkpeptttspkTTTLKATTLAPKVTAPAEEIQNKPEET 815
Cdd:PRK07994  446 ASRARP-VNSALERLASVRPAPsALEKAPAKKEAYRWKATNP-----------VEVKKEPVATPKALKKALEHEKTPELA 513


                  ....*....
gi 161086926  816 TPASEDSDD 824
Cdd:PRK07994  514 AKLAAEAIE 522
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 599-709 9.99e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 49.81  E-value: 9.99e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  599 TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPESTTRKEPEPTTPK-EPEPTTPKEPEPTTPkeP 676
Cdd:PRK14950  343 TTSYGQLPLELAVIEALLVPVPAPQPAKPTAAApSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--P 420

                          90       100       110
                  ....*....|....*....|....*....|....
gi 161086926  677 EPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE 709
Cdd:PRK14950  421 VPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEEE 454
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 638-733 1.03e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 49.81  E-value: 1.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  638 PTTTKEPESTTRKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK-P 716
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437

                          90
                  ....*....|....*..
gi 161086926  717 EPTTPKEPEPTTPKEPE 733
Cdd:PRK14950  438 VDEKPKYTPPAPPKEEE 454
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 597-819 1.06e-05

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 49.54  E-value: 1.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  597 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPE--PTTPKEPEPTTT---KEPESTTRKEPEPTTP-------KEPEPTT 664
Cdd:PLN03209  308 ETTAPLTPMEELLAKIPSQRVPPKESDAADGPKpvPTKPVTPEAPSPpieEEPPQPKAVVPRPLSPytayedlKPPTSPI 387

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  665 PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTT---PKEPEPTTPKEPEPTTP--KKPEPTTPKEPEPTTPKEPEPTTPK 738
Cdd:PLN03209  388 PTPPSSSPASSKSVDAVAKPaEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS 467

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  739 EP-EPTTPKEPEPTTRKEPEPTTPKEPEPTTP-------KEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN 810
Cdd:PLN03209  468 TSsVPAVPDTAPATAATDAAAPPPANMRPLSPyavyddlKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHH 547


                  ....*....
gi 161086926  811 KPEETTPAS 819
Cdd:PLN03209  548 AQPKPRPLS 556
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 546-626 1.07e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 46.32  E-value: 1.07e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   546 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTL 625
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116


                   .
gi 161086926   626 K 626
Cdd:pfam05887  117 K 117
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 484-603 1.12e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 49.71  E-value: 1.12e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  484 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 562
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 161086926  563 EPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKE 603
Cdd:PRK14951  454 QAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 641-747 1.14e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 49.46  E-value: 1.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  641 TKEPESTTRKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKKPEP 718
Cdd:COG3266   255 LKAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTET 332

                          90       100       110
                  ....*....|....*....|....*....|
gi 161086926  719 TTPKEPEP-TTPKEPEPTTPKEPEPTTPKE 747
Cdd:COG3266   333 AAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 634-770 1.15e-05

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 49.63  E-value: 1.15e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 713
Cdd:NF033838  351 KEAELELVKEEAKEPRNEEKIKQAKAKVES--KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKPAEQPQPAPAPQP 428

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  714 KKPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTRKEPePTTPKEPEPTTPK 770
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYaRRSEEEYNRLTQQQP-PKTEKPAQPSTPK 485
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 474-542 1.16e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 46.32  E-value: 1.16e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   474 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 542
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 452-765 1.27e-05

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 49.70  E-value: 1.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTLKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPK 522
Cdd:PRK10263  423 PAPEQPAQQPYYAPAPEQPVAGNAwqaEEQQSTFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPA 502

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  523 EPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTT------- 592
Cdd:PRK10263  503 RPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATgaaatva 582

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  593 -------------PKEPEPTTPKEPEPTTLKEPeptTPKEPEPTTLKEP------------------------------- 628
Cdd:PRK10263  583 apvfslansggprPQVKEGIGPQLPRPKRIRVP---TRRELASYGIKLPsqraaeekareaqrnqydsgdqynddeidam 659

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  629 ---------------------EPTTPKEPEPTTTKEPESTTRK------------EPEPTTP-----------KEPEPTT 664
Cdd:PRK10263  660 qqdelarqfaqtqqqrygeqyQHDVPVNAEDADAAAEAELARQfaqtqqqrysgeQPAGANPfslddfefspmKALLDDG 739

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  665 PKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP----KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEpttPK 738
Cdd:PRK10263  740 PHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ---PQ 816

                         410       420
                  ....*....|....*....|....*..
gi 161086926  739 EPEPTTPKEPEPTTRKEPEPTTPKEPE 765
Cdd:PRK10263  817 YQQPQQPVAPQPQYQQPQQPVAPQPQD 843
MSCRAMM_ClfB NF033845
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ...
 529-828 1.27e-05

MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468203 [Multi-domain]  Cd Length: 871  Bit Score: 49.56  E-value: 1.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:NF033845  543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  609 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPE-P 686
Cdd:NF033845  621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsD 700

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  687 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEP 766
Cdd:NF033845  701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  767 TTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTT 828
Cdd:NF033845  781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKASKQHKTDALPETGDKSENT 842
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 450-518 1.29e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 45.94  E-value: 1.29e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 518
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 481-649 1.32e-05

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 49.70  E-value: 1.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  481 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTT 560
Cdd:PRK10263  716 PAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPV-QQPQQPVAPQQQYQQPQQPVAP-QPQYQQPQQPVAPQPQYQQ 793

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  561 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP--EPTTPKEPEPT-TLKEP------------EPTTPKePEPTTL 625
Cdd:PRK10263  794 PQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQPQdTLLHPllmrngdsrplhKPTTPL-PSLDLL 872

                         170       180
                  ....*....|....*....|....
gi 161086926  626 KEPepttPKEPEPTTTKEPESTTR 649
Cdd:PRK10263  873 TPP----PSEVEPVDTFALEQMAR 892
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 466-534 1.42e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 45.94  E-value: 1.42e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   466 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 534
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK10819 PRK10819
transport protein TonB; Provisional
 516-645 1.50e-05

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 47.75  E-value: 1.50e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  516 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPttLKEPEPTTPK 594
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKP--VKKVEEQPKR 119

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 161086926  595 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKePEPTTPKEPEPTTTKEPE 645
Cdd:PRK10819  120 EVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQPQ 169
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 588-685 1.58e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 49.04  E-value: 1.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  588 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPttlKEPEPTTPkePEPTTTKEPESTtrkePEPTTPKEPEPTTPKE 667
Cdd:PRK14950  366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPP---KEPVRETA--TPPPVPPRPVAP----PVPHTPESAPKLTRAA 435

                          90
                  ....*....|....*....
gi 161086926  668 -PEPTTPKEPEPTTPKEPE 685
Cdd:PRK14950  436 iPVDEKPKYTPPAPPKEEE 454
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 698-766 1.61e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 45.94  E-value: 1.61e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   698 KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEP 766
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 636-739 1.67e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 48.69  E-value: 1.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  636 PEPTTTKEPESTTRkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkepePTTPKEPEPTTPKK 715
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPT------AAKPVVTETAAPAA 337

                          90       100
                  ....*....|....*....|....*
gi 161086926  716 PEP-TTPKEPEPTTPKEPEPTTPKE 739
Cdd:COG3266   338 PAPeAAAAAAAPAAPAVAKKLAADE 362
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 484-579 1.70e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 48.69  E-value: 1.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  484 PEPTTLKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 560
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343

                          90
                  ....*....|....*....
gi 161086926  561 PKEPEPTTPKEPEPTTPKE 579
Cdd:COG3266   344 AAAAAPAAPAVAKKLAADE 362
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
565-651 1.75e-05

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 49.41  E-value: 1.75e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  565 EPTTPKEPEPTTPKEPEPTTlkePEPTtpkEPEPTTPKEPEPtTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 644
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVI---PDPV---DPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTPPIT 631


                  ....*..
gi 161086926  645 ESTTRKE 651
Cdd:PRK15313  632 EHQFRPE 638
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 690-758 1.96e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 45.55  E-value: 1.96e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   690 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEP 758
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 694-778 1.98e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 48.65  E-value: 1.98e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  694 PTTPKEPEPTTPKEPEPTTPKKP--EPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTRKEPEPTTPKE--PEPTT 768
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPTPApsTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEK 441

                          90
                  ....*....|
gi 161086926  769 PKEPEPTTPK 778
Cdd:PRK14950  442 PKYTPPAPPK 451
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
589-686 1.99e-05

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 49.03  E-value: 1.99e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  589 EPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTlkePEPTTPK--EPEPTttkepesttrkEPEPTTPKEPEPTTPK 666
Cdd:PRK15313  559 EPDEPIIPDPVDPVIPDPVI---PDPVDPDPVDPVI---PDPVIPDpvDPDPV-----------DPEPVDPVIPDPTIPD 621

                          90       100
                  ....*....|....*....|
gi 161086926  667 EPEPTTPkepePTTPKEPEP 686
Cdd:PRK15313  622 IGQSDTP----PITEHQFRP 637
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 674-742 2.02e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 45.55  E-value: 2.02e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   674 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 742
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK10819 PRK10819
transport protein TonB; Provisional
 563-702 2.05e-05

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 47.37  E-value: 2.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  563 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPttlkEPEPTTPKePEPTTLKEPEpttpKEPEPTTTK 642
Cdd:PRK10819   36 HQVIELPAPAQPISVTMVAPADLEPPQAVQP-PPEPVVEPEPEP----EPIPEPPK-EAPVVIPKPE----PKPKPKPKP 105

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  643 EPESTTRKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 702
Cdd:PRK10819  106 KPKPVKKVEEQPK--REVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
DUF4045 pfam13254
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...
 678-817 2.15e-05

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.


Pssm-ID: 433066 [Multi-domain]  Cd Length: 415  Bit Score: 48.24  E-value: 2.15e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   678 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 757
Cdd:pfam13254  197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADT-LSTDKEQSPAPTSASEPPPKTKELPKDSEEPA 275

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926   758 PTTPKEPEPTTPKEP--EPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTP 817
Cdd:pfam13254  276 APSKSAEASTEKKEPdtESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSP 337
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
557-741 2.43e-05

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 48.12  E-value: 2.43e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   557 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP 636
Cdd:pfam05539  167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQRGPSGS 246

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   637 --EPTTTKEPESTTRKEPEPTTPKepePTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPK 714
Cdd:pfam05539  247 pqHPPSTTSQDQSTTGDGQEHTQR---RKTP--PATSNRRSPHSTATPPPTTKRQETGRPT----PRPTATTQSGSSPPH 317

                          170       180
                   ....*....|....*....|....*..
gi 161086926   715 KPEPTTPKEPEPTTPKEPEPTTPKEPE 741
Cdd:pfam05539  318 SSPPGVQANPTTQNLVDCKELDPPKPN 344
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 476-571 2.45e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 48.31  E-value: 2.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  476 PEPTTPKEPEPTTLkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 552
Cdd:COG3266   267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343

                          90
                  ....*....|....*....
gi 161086926  553 PKEPEPTTPKEPEPTTPKE 571
Cdd:COG3266   344 AAAAAPAAPAVAKKLAADE 362
dnaA PRK14086
chromosomal replication initiator protein DnaA;
451-647 2.51e-05

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 48.67  E-value: 2.51e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtPKEPEPTTP 529
Cdd:PRK14086   89 DPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGAW-PRAADDYGW 167

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  530 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:PRK14086  168 QQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRrRDYDHPRPDWDRPRRDRTDRPEPPPGAGHVHRGGPGPPE 247

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 161086926  609 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 647
Cdd:PRK14086  248 RDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKYT 286
PRK11633 PRK11633
cell division protein DedD; Provisional
 449-545 2.54e-05

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 46.92  E-value: 2.54e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  449 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPt 527
Cdd:PRK11633   50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEA- 127

                          90
                  ....*....|....*...
gi 161086926  528 tPKEPEPTTPKEPEPTTP 545
Cdd:PRK11633  128 -PPAPKPEPKPVVEEKAA 144
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 612-707 2.58e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 48.31  E-value: 2.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  612 PEPTTPKEPEPTTLkepEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 688
Cdd:COG3266   267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343

                          90
                  ....*....|....*....
gi 161086926  689 PKEPEPTTPKEPEPTTPKE 707
Cdd:COG3266   344 AAAAAPAAPAVAKKLAADE 362
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 564-661 2.60e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 48.27  E-value: 2.60e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  564 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKepepttlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKE 643
Cdd:PRK14950  366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPV---------RETATPPPVPPRPVAPPVPHTPESAPKLTRAA 435

                          90
                  ....*....|....*....
gi 161086926  644 -PESTTRKEPEPTTPKEPE 661
Cdd:PRK14950  436 iPVDEKPKYTPPAPPKEEE 454
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 572-826 2.61e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 48.63  E-value: 2.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  572 PEPTTPKEPEPTTL-KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRK 650
Cdd:PHA03307   65 FEPPTGPPPGPGTEaPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP----PPTPPPASPPPSPAPDLSEMLRP 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  651 EPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEPTTPkkpePTTPKEPEPTTPK 730
Cdd:PHA03307  141 VGSPGPPPAASP--PAAGASPAAVASDAASSRQAALPLSSPEETARA----PSSPPAEPPPST----PPAAASPRPPRRS 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  731 EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPePTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN 810
Cdd:PHA03307  211 SPISASASSPAPAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSS 289

                         250
                  ....*....|....*.
gi 161086926  811 KPEETTPASEDSDDSK 826
Cdd:PHA03307  290 SPRERSPSPSPSSPGS 305
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 658-726 2.70e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 45.17  E-value: 2.70e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   658 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 726
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
 521-741 2.80e-05

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 48.42  E-value: 2.80e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  521 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPE-PT 599
Cdd:PTZ00441  283 PVEPEPLPVPAPVPPTPEDDNPRPTDDEFAVPNFNEGLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDESNvPP 362

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  600 TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEpttpKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 679
Cdd:PTZ00441  363 NPPNVPGGSNSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKPENKGDGQNEPV 438

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  680 TPK--EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEpEPTTPKEPEPTTPKEPE 741
Cdd:PTZ00441  439 IPKplDNERDQSNKNKQVNPGNRHNSEDRYTRPHGRNNENRNYNNK-NSDIPKHPERSEHEQPE 501
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
541-725 2.94e-05

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 48.12  E-value: 2.94e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   541 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKep 620
Cdd:pfam05539  167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQT--EPPPSQRG-- 242

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   621 ePTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPKEPEPTTPKEP 700
Cdd:pfam05539  243 -PSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKR--QETGRPTPRPTATTQSGSSPPHSS 319

                          170       180
                   ....*....|....*....|....*
gi 161086926   701 EPTTPKEPEPTTPKKPEPTTPKEPE 725
Cdd:pfam05539  320 PPGVQANPTTQNLVDCKELDPPKPN 344
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 671-776 3.00e-05

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 48.08  E-value: 3.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  671 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 750
Cdd:PHA03264  253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331

                          90       100
                  ....*....|....*....|....*..
gi 161086926  751 TTRKEPEPTTPKEP-EPTTPKEPEPTT 776
Cdd:PHA03264  332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 644-757 3.05e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 48.17  E-value: 3.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  644 PESTTRKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 719
Cdd:PRK14951  376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 161086926  720 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 757
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 618-723 3.25e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 47.92  E-value: 3.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  618 KEPEPTTLKEPEPTTPKEPEPTTTKEPESttRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPT 695
Cdd:COG3266   256 KAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETA 333

                          90       100
                  ....*....|....*....|....*....
gi 161086926  696 TPKEPEP-TTPKEPEPTTPKKPEPTTPKE 723
Cdd:COG3266   334 APAAPAPeAAAAAAAPAAPAVAKKLAADE 362
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 630-737 3.30e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 48.17  E-value: 3.30e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  630 PTTPKEPEPTTTKEPESTTRKEPEPTTPKE----PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 705
Cdd:PRK14951  381 PARPEAAAPAAAPVAQAAAAPAPAAAPAAAasapAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETV 460

                          90       100       110
                  ....*....|....*....|....*....|..
gi 161086926  706 KEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 737
Cdd:PRK14951  461 AIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 628-749 3.35e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 48.17  E-value: 3.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  628 PEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 706
Cdd:PRK14951  376 AEKKTPARPEA-----AAPAAAPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 161086926  707 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 749
Cdd:PRK14951  451 PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 578-691 3.39e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 47.92  E-value: 3.39e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  578 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLkepePTTPkePEPTTTKEPESTTRKEPEPTTP 657
Cdd:COG3266   256 KAPSQASSASAPATTSLGEQQEVSLPPAVAA--QPAAAAAAQPSAVAL----PAAP--AAAAAAAAPAEAAAPQPTAAKP 327

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 161086926  658 KEPEPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKE 691
Cdd:COG3266   328 VVTETAAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 570-650 3.53e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 44.78  E-value: 3.53e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   570 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTTKEPESTTR 649
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPEPEPEPEPEPEPEPEPGAATL 116


                   .
gi 161086926   650 K 650
Cdd:pfam05887  117 K 117
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
665-831 3.54e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 48.04  E-value: 3.54e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  665 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 744
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  745 PKE---------PEPTTR-------------------------------KEPE------------------------PTT 760
Cdd:PRK14948  441 LEElwqqilaklELPSTRmllsqqaelvsldsnraviavspnwlgmvqsRKPLleqafakvlgrsiklnlesqsgsaSNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  761 PKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKP 831
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKD 591
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 468-563 3.57e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 47.92  E-value: 3.57e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  468 PEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 544
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343

                          90
                  ....*....|....*....
gi 161086926  545 PKEPEPTTPKEPEPTTPKE 563
Cdd:COG3266   344 AAAAAPAAPAVAKKLAADE 362
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 626-694 3.78e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 44.78  E-value: 3.78e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   626 KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 694
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 508-603 4.10e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 47.54  E-value: 4.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  508 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTL 585
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPEAA 343

                          90
                  ....*....|....*....
gi 161086926  586 K-EPEPTTPKEPEPTTPKE 603
Cdd:COG3266   344 AaAAAPAAPAVAKKLAADE 362
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 604-699 4.32e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 47.54  E-value: 4.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  604 PEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 680
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343

                          90
                  ....*....|....*....
gi 161086926  681 PKEPEPTTPKEPEPTTPKE 699
Cdd:COG3266   344 AAAAAPAAPAVAKKLAADE 362
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 618-686 4.40e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 44.40  E-value: 4.40e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   618 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 686
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 539-689 4.56e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 47.07  E-value: 4.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  539 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 614
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  615 ttpkEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTTPKEPEPttPKEPEPTTPKePEPTTP 689
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPA--APEAEEPARPEP--PPAPKPKRRR-RRASVP 334
PRK11633 PRK11633
cell division protein DedD; Provisional
 649-745 4.58e-05

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 46.15  E-value: 4.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  649 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPt 727
Cdd:PRK11633   50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEA- 127

                          90
                  ....*....|....*...
gi 161086926  728 tPKEPEPTTPKEPEPTTP 745
Cdd:PRK11633  128 -PPAPKPEPKPVVEEKAA 144
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
451-569 4.70e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.56  E-value: 4.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPE 525
Cdd:PRK12323  449 APAPAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPD 528

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 161086926  526 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTP 569
Cdd:PRK12323  529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
dnaA PRK14086
chromosomal replication initiator protein DnaA;
492-687 4.71e-05

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 47.51  E-value: 4.71e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  492 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPK 570
Cdd:PRK14086   98 PPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGAW-PRAADDYGWQQQRLGFPP 176

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  571 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEpEPTTLKEPEPTTPKEPEptTTKEPESTTRK 650
Cdd:PRK14086  177 RAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRR-DRTDRPEPPPGAGHVHR--GGPGPPERDDA 251

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 161086926  651 EPEPTTPKEPEPTtPKEPEPTtPKEPEPTTPKEPEPT 687
Cdd:PRK14086  252 PVVPIRPSAPGPL-AAQPAPA-PGPGEPTARLNPKYT 286
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 457-605 4.77e-05

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 47.28  E-value: 4.77e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  457 PKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 534
Cdd:PRK13108  295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIER 373

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  535 TTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTT-LKEPEPTTPKEPEPtTPKEPE 605
Cdd:PRK13108  374 EQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD-DPAEPD 445
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 447-502 4.80e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 44.40  E-value: 4.80e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926   447 TTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 502
Cdd:pfam05887   54 TNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 659-808 4.89e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 47.07  E-value: 4.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  659 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 734
Cdd:NF040712  189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  735 ttpkEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPA-EEI 808
Cdd:NF040712  269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVPSwDDV 339
PRK10819 PRK10819
transport protein TonB; Provisional
 668-778 4.94e-05

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 46.21  E-value: 4.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  668 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 747
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120

                          90       100       110
                  ....*....|....*....|....*....|.
gi 161086926  748 PEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 778
Cdd:PRK10819  121 VKPVEPRPASPFENTAPARPTSSTATAAASK 151
PHA03379 PHA03379
EBNA-3A; Provisional
 457-700 5.04e-05

EBNA-3A; Provisional


Pssm-ID: 223066 [Multi-domain]  Cd Length: 935  Bit Score: 47.75  E-value: 5.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  457 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKEPEPTTPKEP---E 533
Cdd:PHA03379  408 ASEPTYGTPRPPVEKPRPEVPQSLETATSHGSAQVPEPPPVHDLEPGPLHDQHSM---APCPVAQLPPGPLQDLEPgdqL 484

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  534 PTTPKEPEPTTPKEPEPT----TPKEPEPT-TPKEPEPTTPKEPEPTTPkEPEPTTLKEpEPTTPKEPEPTTPKEPEPTT 608
Cdd:PHA03379  485 PGVVQDGRPACAPVPAPAgpivRPWEASLSqVPGVAFAPVMPQPMPVEP-VPVPTVALE-RPVCPAPPLIAMQGPGETSG 562

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  609 LKEPEPTTpkEPEPTTlkepePTTPKEPEPTTTKEPESTTRKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 687
Cdd:PHA03379  563 IVRVRERW--RPAPWT-----PNPPRSPSQMSVRDRLARLRAEAQPyQASVEVQPPQLTQVSPQQPMEYPLEPEQQMFPG 635

                         250
                  ....*....|...
gi 161086926  688 TPKEPEPTTPKEP 700
Cdd:PHA03379  636 SPFSQVADVMRAG 648
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 482-587 5.22e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 47.15  E-value: 5.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  482 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPT 559
Cdd:COG3266   256 KAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETA 333

                          90       100
                  ....*....|....*....|....*....
gi 161086926  560 TPKEPEP-TTPKEPEPTTPKEPEPTTLKE 587
Cdd:COG3266   334 APAAPAPeAAAAAAAPAAPAVAKKLAADE 362
PRK11633 PRK11633
cell division protein DedD; Provisional
 652-752 5.25e-05

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 46.15  E-value: 5.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  652 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 730
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|..
gi 161086926  731 EPEPttPKEPEPTTPKEPEPTT 752
Cdd:PRK11633  124 KVEA--PPAPKPEPKPVVEEKA 143
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
644-819 5.85e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 47.26  E-value: 5.85e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  644 PESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 723
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  724 ---------PEPTT------------------------------------------------------PKEPEPTTPKEP 740
Cdd:PRK14948  444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  741 EPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKpeptttspktttlkATTLAPKVTAPAEEIQNKPEETTPAS 819
Cdd:PRK14948  524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQA--------------SSNAPAQIPADSSPPPPIPEEPTPSP 588
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 671-771 6.09e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 47.15  E-value: 6.09e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  671 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 750
Cdd:COG3266   265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAP----AAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340

                          90       100
                  ....*....|....*....|..
gi 161086926  751 -TTRKEPEPTTPKEPEPTTPKE 771
Cdd:COG3266   341 eAAAAAAAPAAPAVAKKLAADE 362
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 610-678 6.34e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 44.01  E-value: 6.34e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   610 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 678
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 394-774 6.47e-05

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 47.39  E-value: 6.47e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  394 PKEPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTtpkePEPTTPKEPEPTTP 473
Cdd:PRK10263  374 APAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQA 449

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  474 KEPEPttPKEPEPTTLKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP-K 546
Cdd:PRK10263  450 EEQQS--TFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLAAwY 527

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  547 EPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTT--------------------PKEPEPTTPKEP 604
Cdd:PRK10263  528 QPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATgaaatvaapvfslansggprPQVKEGIGPQLP 607

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  605 EPTTLKEPeptTPKEPEPTTLKEPEPTTPKE------------------------------------------------- 635
Cdd:PRK10263  608 RPKRIRVP---TRRELASYGIKLPSQRAAEEkareaqrnqydsgdqynddeidamqqdelarqfaqtqqqrygeqyqhdv 684

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  636 ----------PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPT 703
Cdd:PRK10263  685 pvnaedadaaAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPlfTPIVEPVQQPQQPVAPQQQ 764

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  704 TPKEPEPTTP----KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEP--EPTTPKEPEP 774
Cdd:PRK10263  765 YQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQP 841
PRK11633 PRK11633
cell division protein DedD; Provisional
 598-697 6.60e-05

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 45.76  E-value: 6.60e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  598 PTTPK---EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP--EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT 672
Cdd:PRK11633   42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPslDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP 121

                          90       100
                  ....*....|....*....|....*
gi 161086926  673 PKEPEPttPKEPEPTTPKEPEPTTP 697
Cdd:PRK11633  122 QQKVEA--PPAPKPEPKPVVEEKAA 144
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 446-523 7.25e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 47.19  E-value: 7.25e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 523
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 452-533 7.38e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 47.11  E-value: 7.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPT----TPKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPK---EPEPTTPKEPEPTTPKE-PEPTTPKE 523
Cdd:PRK14950  366 PQPAKPTAAAPSpvrpTPAPSTRPKAAAAANIPPKEPVRET-ATPPPVPPRpvaPPVPHTPESAPKLTRAAiPVDEKPKY 444

                          90
                  ....*....|
gi 161086926  524 PEPTTPKEPE 533
Cdd:PRK14950  445 TPPAPPKEEE 454
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 522-590 7.99e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 44.01  E-value: 7.99e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   522 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 590
Cdd:pfam05887   43 KGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 111
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 612-691 8.03e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 47.19  E-value: 8.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  612 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 691
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PHA03369 PHA03369
capsid maturational protease; Provisional
 660-763 8.08e-05

capsid maturational protease; Provisional


Pssm-ID: 223061 [Multi-domain]  Cd Length: 663  Bit Score: 46.92  E-value: 8.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  660 PEPTTPKEP--EPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP-EPTTPKEPEPT 735
Cdd:PHA03369  354 TAPSRVLAAaaKVAVIAAPQThTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSPGTSYGPEPV 433

                          90       100
                  ....*....|....*....|....*...
gi 161086926  736 TPKEPEPTTPKEPEPTTRKEPEPTTPKE 763
Cdd:PHA03369  434 GPVPPQPTNPYVMPISMANMVYPGHPQE 461
PHA03247 PHA03247
large tegument protein UL36; Provisional
 574-801 8.27e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 47.24  E-value: 8.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  574 PTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT-PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 652
Cdd:PHA03247  255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVwGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAM 334

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  653 EPTTPKepepTTPKEPEPTT-PKEPEPTTpkepepTTPKEPEPTTPKEPEPttPKEPEPTTPKKPEPTTpKEPEPTTPKE 731
Cdd:PHA03247  335 EVVSPL----PRPRQHYPLGfPKRRRPTW------TPPSSLEDLSAGRHHP--KRASLPTRKRRSARHA-ATPFARGPGG 401

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  732 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPT-TPKEPE-PTTPKKPEPTTTSPKTTTLKATTLAPKV 801
Cdd:PHA03247  402 DDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAPATEPAPDDPDDATRKA 473
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 588-705 8.72e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 46.63  E-value: 8.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  588 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTLKEP-EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 665
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 161086926  666 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 705
Cdd:PRK14951  453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 446-525 8.76e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 46.73  E-value: 8.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEP 524
Cdd:PRK14950  375 APSPVRPTPAPSTRPKAAAAANIPPKEPV-RETATPPPVPPRPVAPPVPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEE 453


                  .
gi 161086926  525 E 525
Cdd:PRK14950  454 E 454
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 446-622 9.03e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 46.63  E-value: 9.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPE 525
Cdd:PRK08691  400 AETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQT-SAKSIQTASEAETPPENQVSKNKAAD 478

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  526 PTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE---PEPTTLKEPEPTTPKEPEpttp 601
Cdd:PRK08691  479 NETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAeipPPDWEHAAPADTAGGGAD---- 554

                         170       180
                  ....*....|....*....|.
gi 161086926  602 KEPEPTTLKEPEptTPKEPEP 622
Cdd:PRK08691  555 EEAEAGGIGGNN--TPSAPPP 573
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 451-633 9.04e-05

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 46.84  E-value: 9.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKEPE-----------------------PTTPKEPEPTTPKEPEPT----TLKEPEPTTPKEPEPT 503
Cdd:PLN03209  340 KPVPTKPVTPEAPSPPIEEeppqpkavvprplspytayedlkPPTSPIPTPPSSSPASSKsvdaVAKPAEPDVVPSPGSA 419

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  504 T---PKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTP 577
Cdd:PLN03209  420 SnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSSTSsVPAVPDTAPATAATDAAAPPPANMRPLSP 499

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  578 ----KEPEPTTLKEPEPTTPKEPEPTTPKepEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 633
Cdd:PLN03209  500 yavyDDLKPPTSPSPAAPVGKVAPSSTNE--VVKVGNSAPPTALADEQHHAQPKPRPLSP 557
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 451-531 9.87e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 46.38  E-value: 9.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT--PKEPEPTTPKEPEP-TTPKEPEPTTPKEPEPT 527
Cdd:COG3266   279 SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAAAAAAAPAAPAVAKKL 358


                  ....
gi 161086926  528 TPKE 531
Cdd:COG3266   359 AADE 362
Trypan_PARP pfam05887
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ...
 586-654 9.96e-05

Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.


Pssm-ID: 368653  Cd Length: 134  Bit Score: 43.63  E-value: 9.96e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926   586 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 654
Cdd:pfam05887   41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
PRK10819 PRK10819
transport protein TonB; Provisional
 606-757 1.03e-04

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 45.44  E-value: 1.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  606 PTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESttrkEPEPTTpkEPEPTTPKePEPTTPKEPEPTTPKEPE 685
Cdd:PRK10819   36 HQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP----EPEPIP--EPPKEAPV-VIPKPEPKPKPKPKPKPK 108

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  686 PTTPKEPEPTTPKEPepttpkePEPTTPKKPEPTTPKEPEPTTPkepePTTPKEPEPTTPKEPEPTTRKEPE 757
Cdd:PRK10819  109 PVKKVEEQPKREVKP-------VEPRPASPFENTAPARPTSSTA----TAAASKPVTSVSSGPRALSRNQPQ 169
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
 617-773 1.06e-04

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 46.50  E-value: 1.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  617 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPeptt 696
Cdd:PTZ00441  283 PVEPEPLPVPAPVPPTPEDDNPRPTDDEFAVPNFNEGLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDES---- 358

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  697 pkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 773
Cdd:PTZ00441  359 ---NVPPNPPNVPGGSNSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKPE 428
PRK10819 PRK10819
transport protein TonB; Provisional
 475-617 1.15e-04

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 45.06  E-value: 1.15e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  475 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPkEPEPTtpKEPEpttpKEPEPttpkEPEPTTPKE-PEPTTPKEPEPTTP 553
Cdd:PRK10819   36 HQVIELPAPAQPISVTMVAPADLEPPQAVQP-PPEPV--VEPE----PEPEP----IPEPPKEAPvVIPKPEPKPKPKPK 104

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  554 KEPEPTTPKEPEP---TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 617
Cdd:PRK10819  105 PKPKPVKKVEEQPkreVKPVEPRPASPFENTAPARPTSSTATAAASKPVTSVSSGPRALSRNQPQYP 171
dnaA PRK14086
chromosomal replication initiator protein DnaA;
505-727 1.20e-04

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 46.36  E-value: 1.20e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  505 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEPttpkePEPTT 584
Cdd:PRK14086   87 TVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTAR----PAYPAYQQR-----PEPGA 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  585 LKEPEPTTPKEPEPTTPKEPEPttlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRkePEPTTPKEPEPTT 664
Cdd:PRK14086  158 WPRAADDYGWQQQRLGFPPRAP-------YASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPR--PDWDRPRRDRTDR 228

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  665 PkEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPtTPKEPEPtTPKKPEPTTPKEPEPT 727
Cdd:PRK14086  229 P-EPPPGAGHVHRGGPGPPERDDAPVVPI--RPSAPGP-LAAQPAP-APGPGEPTARLNPKYT 286
PRK11633 PRK11633
cell division protein DedD; Provisional
 614-730 1.21e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.99  E-value: 1.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  614 PTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttpkepepttpkepEPTTPK 690
Cdd:PRK11633   42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEP--------------APVEPP 107

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 161086926  691 EPEPTTPKEPEPTTPKEPEPTTPKKPEPtTPKEPEPTTPK 730
Cdd:PRK11633  108 KPKPVEKPKPKPKPQQKVEAPPAPKPEP-KPVVEEKAAPT 146
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
 577-773 1.22e-04

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 46.11  E-value: 1.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  577 PKEPEPTTLKEPEPTTPKEPEPTTPKE----PEPTT-LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKE 651
Cdd:PTZ00441  283 PVEPEPLPVPAPVPPTPEDDNPRPTDDefavPNFNEgLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDESNVPP 362

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  652 PEPTTP----KEPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPT 727
Cdd:PTZ00441  363 NPPNVPggsnSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKPENKGDGQNEPV 438

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  728 TPK----------EPEPTTPKEPEPTTPKEPEP-------TTRKEPEPTTPKEPEPTTPKEPE 773
Cdd:PTZ00441  439 IPKpldnerdqsnKNKQVNPGNRHNSEDRYTRPhgrnnenRNYNNKNSDIPKHPERSEHEQPE 501
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 503-608 1.24e-04

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 46.15  E-value: 1.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  503 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 582
Cdd:PHA03264  253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331

                          90       100
                  ....*....|....*....|....*..
gi 161086926  583 TTLKEPEPTTPKEP-EPTTPKEPEPTT 608
Cdd:PHA03264  332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
PRK10819 PRK10819
transport protein TonB; Provisional
 676-779 1.25e-04

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 45.06  E-value: 1.25e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  676 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKE 755
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120

                          90       100
                  ....*....|....*....|....
gi 161086926  756 PEPTTPKEPEPTTPKEPEPTTPKK 779
Cdd:PRK10819  121 VKPVEPRPASPFENTAPARPTSST 144
PRK14949 PRK14949
DNA polymerase III subunits gamma and tau; Provisional
 450-596 1.26e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237863 [Multi-domain]  Cd Length: 944  Bit Score: 46.26  E-value: 1.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  450 KEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT--TPKEPEP 526
Cdd:PRK14949  637 KKSSAdRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYdrPPWEEAP 716

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  527 TTpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 596
Cdd:PRK14949  717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQAthQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
630-818 1.31e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 46.41  E-value: 1.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  630 PTTPKEPEPTTTKEPESTTRKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 709
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  710 PTTPKKPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKT 789
Cdd:PRK12323  452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESI 526

                         170       180
                  ....*....|....*....|....*....
gi 161086926  790 TTLKATTLAPKVTAPAEEIQNKPEETTPA 818
Cdd:PRK12323  527 PDPATADPDDAFETLAPAPAAAPAPRAAA 555
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 598-693 1.31e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 46.34  E-value: 1.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  598 PTTPKEPEPTTLKEPEPTTPK--EPEPTTLKEPEPTTPKEPEPTTTKEPESTtrkePEPTTPkePEPTTPKEPEPTTPKE 675
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPTpaPSTRPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAPKLTRAA 435

                          90
                  ....*....|....*....
gi 161086926  676 -PEPTTPKEPEPTTPKEPE 693
Cdd:PRK14950  436 iPVDEKPKYTPPAPPKEEE 454
PRK11633 PRK11633
cell division protein DedD; Provisional
 500-601 1.36e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.61  E-value: 1.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  500 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 578
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|...
gi 161086926  579 EPEPTTlkEPEPTTPKEPEPTTP 601
Cdd:PRK11633  124 KVEAPP--APKPEPKPVVEEKAA 144
PRK11633 PRK11633
cell division protein DedD; Provisional
 676-777 1.42e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.61  E-value: 1.42e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  676 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKKpEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRK 754
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAPSL-DPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|...
gi 161086926  755 EPEPttPKEPEPTTPKEPEPTTP 777
Cdd:PRK11633  124 KVEA--PPAPKPEPKPVVEEKAA 144
PRK10819 PRK10819
transport protein TonB; Provisional
 548-670 1.43e-04

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 45.06  E-value: 1.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  548 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTT---PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 624
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP----EPEPIPeppKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQP 117

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 161086926  625 LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKePEPTTPKEPEP 670
Cdd:PRK10819  118 KREVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
679-762 1.52e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 45.01  E-value: 1.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  679 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPttpkKPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTRKEP 756
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQS----KPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96


                  ....*.
gi 161086926  757 EPTTPK 762
Cdd:PRK13042   97 TEINPK 102
DUF4045 pfam13254
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...
 450-598 1.55e-04

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.


Pssm-ID: 433066 [Multi-domain]  Cd Length: 415  Bit Score: 45.54  E-value: 1.55e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTLKEPEPTTPKEPEPTTPKEPEP---TTPKEPEPT 519
Cdd:pfam13254  201 KEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPseeadtlSTDKEQSPAPTSASEPPPKTKELPkdsEEPAAPSKS 280

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   520 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLK--EPEPTTPKEPE 597
Cdd:pfam13254  281 AEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPK-PKPQSPPKDFRANLRsrEVPKDKSKKDE 359


                   .
gi 161086926   598 P 598
Cdd:pfam13254  360 P 360
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
455-621 1.55e-04

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 45.81  E-value: 1.55e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   455 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKEPEPTTPKEPeP 534
Cdd:pfam05539  177 TTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQT----EPPPSQRGPSGSPQHP-P 251

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   535 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE------PEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:pfam05539  252 STTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQetgrptPRPTATTQSGSSPPHSSPPGVQANPTTQN 331

                          170
                   ....*....|...
gi 161086926   609 LKEPEPTTPKEPE 621
Cdd:pfam05539  332 LVDCKELDPPKPN 344
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
446-606 1.63e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 46.00  E-value: 1.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---- 521
Cdd:PRK07003  438 RGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPaaas 517

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  522 KEPEPTTPKEPEPTTPkEPEPTTPKEP--------------------------EPTTPKEPEPTTPKEPEPTTPKEPEPT 575
Cdd:PRK07003  518 REDAPAAAAPPAPEAR-PPTPAAAAPAaraggaaaaldvlrnagmrvssdrgaRAAAAAKPAAAPAAAPKPAAPRVAVQV 596

                         170       180       190
                  ....*....|....*....|....*....|..
gi 161086926  576 -TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 606
Cdd:PRK07003  597 pTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 588-667 1.65e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 46.04  E-value: 1.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  588 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 667
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
PRK10819 PRK10819
transport protein TonB; Provisional
 532-654 1.65e-04

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 44.67  E-value: 1.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  532 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE 611
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 161086926  612 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKePESTTRKEPEP 654
Cdd:PRK10819  121 VKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
PRK14949 PRK14949
DNA polymerase III subunits gamma and tau; Provisional
 529-684 1.69e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237863 [Multi-domain]  Cd Length: 944  Bit Score: 45.87  E-value: 1.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTLKEPEPTTPKEPEPTTPKEPEP 606
Cdd:PRK14949  637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEaaLASGSAPAPPPVPDPYDRPPWEEAP 716

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  607 TTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTtkEPESTtrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 684
Cdd:PRK14949  717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
PRK11633 PRK11633
cell division protein DedD; Provisional
 508-608 1.80e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.22  E-value: 1.80e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  508 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 586
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|..
gi 161086926  587 EPEPttPKEPEPTTPKEPEPTT 608
Cdd:PRK11633  124 KVEA--PPAPKPEPKPVVEEKA 143
PRK11633 PRK11633
cell division protein DedD; Provisional
 476-577 1.85e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.22  E-value: 1.85e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  476 PEPTTPKEPEPT-TLKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 554
Cdd:PRK11633   45 PKPGDRDEPDMMpAATQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|...
gi 161086926  555 EPEPttPKEPEPTTPKEPEPTTP 577
Cdd:PRK11633  124 KVEA--PPAPKPEPKPVVEEKAA 144
PRK11633 PRK11633
cell division protein DedD; Provisional
 668-770 1.85e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.22  E-value: 1.85e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  668 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 746
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|....
gi 161086926  747 EPEPTTRKEPEPtTPKEPEPTTPK 770
Cdd:PRK11633  124 KVEAPPAPKPEP-KPVVEEKAAPT 146
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 482-762 1.88e-04

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 45.77  E-value: 1.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  482 KEPEPTTLKEPEptTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEpTTPKEPEPTTPK 554
Cdd:NF033838  216 KKAEATRLEKIK--TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGE 292

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  555 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE----PT-TPKEPE------PTTPKEPEPTTLKEpEPTTPKEPEPt 623
Cdd:NF033838  293 ETLPSPSLKPEKKVAEAEKKVEEAKKKAKDQKEEDrrnyPTnTYKTLEleiaesDVKVKEAELELVKE-EAKEPRNEEK- 370

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  624 tLKEPEPTTPKEPEPTTTKEPESTTRKepepttpKEPEPTTPKEPEPTTPKEPeptTPKEPEPTTPKEPEPTTPKepePT 703
Cdd:NF033838  371 -IKQAKAKVESKKAEATRLEKIKTDRK-------KAEEEAKRKAAEEDKVKEK---PAEQPQPAPAPQPEKPAPK---PE 436

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  704 TPKEpeptTPKKPEPTTPKEPEPTTPKEPEpttpkEPEPTTPKEPePTTRKEPEPTTPK 762
Cdd:NF033838  437 KPAE----QPKAEKPADQQAEEDYARRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 548-651 1.96e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 45.23  E-value: 1.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  548 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKepepttPKEPEPTTLKE 627
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAK------PVVTETAAPAA 337

                          90       100
                  ....*....|....*....|....*
gi 161086926  628 PEP-TTPKEPEPTTTKEPESTTRKE 651
Cdd:COG3266   338 PAPeAAAAAAAPAAPAVAKKLAADE 362
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 532-627 1.98e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 45.23  E-value: 1.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  532 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT--PKEPEPTTPKEPEPTTL 609
Cdd:COG3266   265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPEAA 343

                          90
                  ....*....|....*....
gi 161086926  610 K-EPEPTTPKEPEPTTLKE 627
Cdd:COG3266   344 AaAAAPAAPAVAKKLAADE 362
FimV COG3170
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
485-764 2.12e-04

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];


Pssm-ID: 442403 [Multi-domain]  Cd Length: 508  Bit Score: 45.55  E-value: 2.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  485 EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEP 564
Cdd:COG3170    99 EYTLLLDPPAYAAAAAAPAAAPAPAPAAPAAAAAAADQPAAEAAPAASGEYYPVRPGDTLWSIAARPVR--PSSGVSLDQ 176

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  565 EPTTPKEPEPTTPKEPEPTTLKEPEPT---TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTT 641
Cdd:COG3170   177 MMVALYRANPDAFIDGNINRLKAGAVLrvpAAEEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAA 256

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  642 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEP-TTPKEPEPTTPkkpeP 718
Cdd:COG3170   257 AAAAGPVPAAAEDTLSPEVTAAAAAEEADALPEAAAELAErlAALEAQLAELQRLLALKNPAPaAAVSAPAAAAA----A 332

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 161086926  719 TTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTRKEPEPTTPKEP 764
Cdd:COG3170   333 ATVEAAAPAAAAQPAAAAP-APALDNPLLLAGLLRRRKAEADEVDP 377
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 505-657 2.24e-04

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 45.35  E-value: 2.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  505 PKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEP 580
Cdd:PRK13108  295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdiERE 374

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  581 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPtTPKEPEPTTTKEPesttrkEPEPTTP 657
Cdd:PRK13108  375 QPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIP-DPAKPDELAVAGP------GDDPAEP 444
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 455-560 2.29e-04

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 45.00  E-value: 2.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  455 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 534
Cdd:PHA03264  253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331

                          90       100
                  ....*....|....*....|....*..
gi 161086926  535 TTPKEPEPTTPKEP-EPTTPKEPEPTT 560
Cdd:PHA03264  332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 573-778 2.31e-04

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 45.39  E-value: 2.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  573 EPTTPKEPEpTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPE----PT-TPKEPEPTTT------ 641
Cdd:NF033838  272 EPATPDKKE-NDAKSSDSSVGEETLPSPSLKPEKKVAEAEKKVEEAKKKAKDQKEEDrrnyPTnTYKTLELEIAesdvkv 350

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  642 KEPESTTRKEpEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKKPEPTTp 721
Cdd:NF033838  351 KEAELELVKE-EAKEPRNEEKI-KQAKAKVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKE-KPAEQPQPAPAP- 426

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  722 kEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTRK---EPEPTTPKEPePTTPKEPEPTTPK 778
Cdd:NF033838  427 -QPEKPAPKPEKPAeQPKAEKPADQQAEEDYARRseeEYNRLTQQQP-PKTEKPAQPSTPK 485
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 464-606 2.42e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 45.46  E-value: 2.42e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  464 TPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTTPkepePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 541
Cdd:PRK10263  739 GPHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAP----QPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 814

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  542 PTTPKEPEPTTPkEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEP 606
Cdd:PRK10263  815 PQYQQPQQPVAP-QPQYQQPQQPVAPQPQDTllHPLLMRNGDSRPLHKPTTPLPSLDLLTPpPSEVEP 881
dnaA PRK14086
chromosomal replication initiator protein DnaA;
587-775 2.47e-04

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 45.20  E-value: 2.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  587 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKE-PESTTRKEPEPtTPKEPEPTTP 665
Cdd:PRK14086   89 DPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAyPAYQQRPEPGA-WPRAADDYGW 167

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  666 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkKPEPTTPKEPEPTTPkEPEPTTPKEPE---- 741
Cdd:PRK14086  168 QQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAGHVHRggpg 244

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 161086926  742 -PTTPKEPEPTTRKEPEPTTPKEPEPtTPKEPEPT 775
Cdd:PRK14086  245 pPERDDAPVVPIRPSAPGPLAAQPAP-APGPGEPT 278
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 655-764 2.67e-04

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 45.00  E-value: 2.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  655 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 734
Cdd:PHA03264  253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331

                          90       100       110
                  ....*....|....*....|....*....|
gi 161086926  735 TTPKEPEPTTPKEPEPTtrkePEPTTPKEP 764
Cdd:PHA03264  332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
PRK11633 PRK11633
cell division protein DedD; Provisional
 540-640 2.74e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 43.84  E-value: 2.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  540 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK 618
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|..
gi 161086926  619 EPEPTTlkEPEPTTPKEPEPTT 640
Cdd:PRK11633  124 KVEAPP--APKPEPKPVVEEKA 143
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 679-777 2.89e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 44.84  E-value: 2.89e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  679 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEP 758
Cdd:COG3266   265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340

                          90       100
                  ....*....|....*....|
gi 161086926  759 -TTPKEPEPTTPKEPEPTTP 777
Cdd:COG3266   341 eAAAAAAAPAAPAVAKKLAA 360
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 511-611 3.00e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 44.84  E-value: 3.00e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  511 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 590
Cdd:COG3266   265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340

                          90       100
                  ....*....|....*....|..
gi 161086926  591 -TTPKEPEPTTPKEPEPTTLKE 611
Cdd:COG3266   341 eAAAAAAAPAAPAVAKKLAADE 362
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
493-661 3.18e-04

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 44.65  E-value: 3.18e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   493 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT---PKEPEPTTP 569
Cdd:pfam05539  167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   570 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE------PEPTTLKEPEPTTPKEPEPTTTKE 643
Cdd:pfam05539  247 PQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQetgrptPRPTATTQSGSSPPHSSPPGVQAN 326

                          170
                   ....*....|....*...
gi 161086926   644 PESTTRKEPEPTTPKEPE 661
Cdd:pfam05539  327 PTTQNLVDCKELDPPKPN 344
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 564-681 3.19e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.09  E-value: 3.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  564 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPT-TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTT 641
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 161086926  642 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 681
Cdd:PRK14951  453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
509-693 3.23e-04

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 44.65  E-value: 3.23e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   509 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT---PKEPEPTTL 585
Cdd:pfam05539  167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   586 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKepeptttkepESTTRKEPEPTTPKEPEPTTP 665
Cdd:pfam05539  247 PQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKR----------QETGRPTPRPTATTQSGSSPP 316

                          170       180
                   ....*....|....*....|....*...
gi 161086926   666 KEPEPTTPKEPEPTTPKEPEPTTPKEPE 693
Cdd:pfam05539  317 HSSPPGVQANPTTQNLVDCKELDPPKPN 344
PRK10905 PRK10905
cell division protein DamX; Validated
 663-778 3.24e-04

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 44.16  E-value: 3.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  663 TTPKEPEPTTPKEPEPTTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTPKEPEPT--TPKE 731
Cdd:PRK10905  106 TQPQNQQQLNNVAVNSTLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAviePKKPQATAKTEPKPVaqTPKR 185

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 161086926  732 PEPTTPKEPepttPKEPEPTTRKEPEPTTPKEPEPT-TPKEPEPTTPK 778
Cdd:PRK10905  186 TEPAAPVAS----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 633-774 3.48e-04

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 44.58  E-value: 3.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  633 PKEPEPTT-TKEPESTTRKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 710
Cdd:PRK13108  295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIER 373

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  711 TTPKKPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTRKEPEPTT-PKEPEPTTPKEPEP 774
Cdd:PRK13108  374 EQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD 439
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 446-672 3.55e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 44.57  E-value: 3.55e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 525
Cdd:pfam17823  200 SSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARR 279

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   526 PTTPKE-PEPTTPKEPEPTTPKEPEPTTPK----EPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPT 599
Cdd:pfam17823  280 LSPAKHmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPS 359

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926   600 TPKEPEPTTLKEPE-----PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT 672
Cdd:pfam17823  360 ASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPKTLAMASCQLST 437
PHA03169 PHA03169
hypothetical protein; Provisional
 466-674 3.69e-04

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 44.58  E-value: 3.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  466 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpKEPEPTTP 545
Cdd:PHA03169   44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAE---ELASGLSP 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  546 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTL 625
Cdd:PHA03169  121 ENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTS 200

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 161086926  626 KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPK 674
Cdd:PHA03169  201 SPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 676-777 3.72e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 44.71  E-value: 3.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  676 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTT 752
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAvaLAPAPPA 453

                          90       100
                  ....*....|....*....|....*...
gi 161086926  753 RKEPEPTTPK---EPEPTTPKEPEPTTP 777
Cdd:PRK14951  454 QAAPETVAIPvrvAPEPAVASAAPAPAA 481
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
645-820 3.72e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.87  E-value: 3.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  645 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 724
Cdd:PRK12323  371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  725 EPTTPKEPEPTTP---KEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKV 801
Cdd:PRK12323  451 APAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPA 530

                         170
                  ....*....|....*....
gi 161086926  802 TAPAEEIQNKPEETTPASE 820
Cdd:PRK12323  531 TADPDDAFETLAPAPAAAP 549
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 451-563 3.78e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 44.86  E-value: 3.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTT 528
Cdd:PRK07994  414 PLPETTSQLLAARQQlqRAQGATKAKKSEPAAASRARPVN-SALERLASVRPAPSALEKA----PAKKEAYRWKATNPVE 488

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 161086926  529 PKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKE 563
Cdd:PRK07994  489 VKKEPVATPKALKKalEHEKTPELAAKLAAEAIERDP 525
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 607-667 3.83e-04

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 44.12  E-value: 3.83e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   607 TTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 667
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 454-581 3.89e-04

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 44.58  E-value: 3.89e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  454 PTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP----KEPEPTTPKEPE-PTTPKEPEPTT 528
Cdd:PRK13108  320 PGEPNQPDDVA--EAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdierEQPGDLAGQAPAaHQVDAEAASAA 397

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPtTPKEPE 581
Cdd:PRK13108  398 PEEPAALASEAHDETEPEVPEKAAPI----PDPAKPDELAVAGPGD-DPAEPD 445
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
646-730 3.92e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.85  E-value: 3.92e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  646 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKkpEPTTPKE 723
Cdd:PRK13042   22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQV 95


                  ....*..
gi 161086926  724 PEPTTPK 730
Cdd:PRK13042   96 PTEINPK 102
PRK12757 PRK12757
cell division protein FtsN; Provisional
 621-701 4.30e-04

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 43.49  E-value: 4.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  621 EPTTLKE-PE-PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 698
Cdd:PRK12757   98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177


                  ...
gi 161086926  699 EPE 701
Cdd:PRK12757  178 EKE 180
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
495-578 4.36e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.85  E-value: 4.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  495 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKEP 572
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96


                  ....*.
gi 161086926  573 EPTTPK 578
Cdd:PRK13042   97 TEINPK 102
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
655-738 4.40e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.85  E-value: 4.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  655 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKepEPTTPKEP 732
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96


                  ....*.
gi 161086926  733 EPTTPK 738
Cdd:PRK13042   97 TEINPK 102
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
487-570 4.52e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.85  E-value: 4.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  487 TTLKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKEP 564
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96


                  ....*.
gi 161086926  565 EPTTPK 570
Cdd:PRK13042   97 TEINPK 102
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 548-677 4.52e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 44.32  E-value: 4.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  548 PEPTTPKEPEPTTP-KEPEPTTPKepePTTPKEPEPTTLKEPepttpkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTLK 626
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAA---APAPAAAPAAAASAP-------AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 161086926  627 EPEPTTPKEPEPTTTKEPestTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 677
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIP---VRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
639-722 4.56e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.85  E-value: 4.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  639 TTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKKP 716
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96


                  ....*.
gi 161086926  717 EPTTPK 722
Cdd:PRK13042   97 TEINPK 102
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 614-826 4.57e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 44.78  E-value: 4.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  614 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 693
Cdd:PHA03307   25 PATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  694 pttpkEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 773
Cdd:PHA03307  105 -----SPTPPGP-SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS 178

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 161086926  774 PTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSK 826
Cdd:PHA03307  179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADD 231
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 715-779 4.74e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 44.50  E-value: 4.74e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  715 KPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 779
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPA 101
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 639-699 5.28e-04

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 43.73  E-value: 5.28e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   639 TTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 699
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 540-660 5.65e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 43.93  E-value: 5.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  540 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK 618
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 161086926  619 EPEPTTLKEPEPTTPkEPePTTTKEPESTTRKEPEPTTPKEP 660
Cdd:PRK14951  454 QAAPETVAIPVRVAP-EP-AVASAAPAPAAAPAAARLTPTEE 493
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 580-697 5.94e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 43.93  E-value: 5.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  580 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 657
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 161086926  658 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:PRK14951  453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK14949 PRK14949
DNA polymerase III subunits gamma and tau; Provisional
 545-700 5.97e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237863 [Multi-domain]  Cd Length: 944  Bit Score: 44.33  E-value: 5.97e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  545 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPE--PTTPKEPEPTTLKEPEPTTPKEPEP 622
Cdd:PRK14949  637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEaaLASGSAPAPPPVPDPYDRPPWEEAP 716

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  623 TTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 700
Cdd:PRK14949  717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
PRK10819 PRK10819
transport protein TonB; Provisional
 500-624 5.99e-04

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 43.13  E-value: 5.99e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  500 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttpKEPEPttpkEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPK 578
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPE----PEPEP----IPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKV 113

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 161086926  579 EPEPTtlKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTT 624
Cdd:PRK10819  114 EEQPK--REVKPVEPRPASPFENTAPARPT---SSTATAAASKPVT 154
PHA03369 PHA03369
capsid maturational protease; Provisional
 584-699 6.30e-04

capsid maturational protease; Provisional


Pssm-ID: 223061 [Multi-domain]  Cd Length: 663  Bit Score: 43.83  E-value: 6.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  584 TLKEPEPTTPKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEP-EP 662
Cdd:PHA03369  350 TASLTAPSRVLAAAAKVAVIAAPQT-----HTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSP 424

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 161086926  663 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 699
Cdd:PHA03369  425 GTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQE 461
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 448-515 6.33e-04

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 43.73  E-value: 6.33e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926   448 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKE 515
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK14960 PRK14960
DNA polymerase III subunit gamma/tau;
481-604 6.87e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237868 [Multi-domain]  Cd Length: 702  Bit Score: 43.88  E-value: 6.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  481 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT------TPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTT 552
Cdd:PRK14960  407 PAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPQPNqdlmvfDPNHHELIGLESAvvQETVSVLEEDFIPVPEQKLV 486

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 161086926  553 PKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 604
Cdd:PRK14960  487 QVQAETQVKQiEPEPASTAEPIGLFEASSAEFSLAQDTSAYDLVSEPVIEQQS 539
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 535-635 6.90e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 43.69  E-value: 6.90e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  535 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 614
Cdd:COG3266   265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340

                          90       100
                  ....*....|....*....|..
gi 161086926  615 -TTPKEPEPTTLKEPEPTTPKE 635
Cdd:COG3266   341 eAAAAAAAPAAPAVAKKLAADE 362
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
597-773 7.04e-04

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 43.50  E-value: 7.04e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   597 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTpkepEPTTPKEP 676
Cdd:pfam05539  167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQT----EPPPSQRG 242

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   677 EPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKKP-EPTTPKEPEPTTPKE------PEPTTPKEPEPTTPKEPE 749
Cdd:pfam05539  243 PSGSPQHPPSTT--SQDQSTTGDGQEHTQRRKTPPATSNRrSPHSTATPPPTTKRQetgrptPRPTATTQSGSSPPHSSP 320

                          170       180
                   ....*....|....*....|....
gi 161086926   750 PTTRKEPEPTTPKEPEPTTPKEPE 773
Cdd:pfam05539  321 PGVQANPTTQNLVDCKELDPPKPN 344
PRK14960 PRK14960
DNA polymerase III subunit gamma/tau;
550-732 7.05e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237868 [Multi-domain]  Cd Length: 702  Bit Score: 43.88  E-value: 7.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  550 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPE 629
Cdd:PRK14960  360 PLAPNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEVISQPAMVEPEPEP----EPEPEPEPEPEPEPEPEPE 435

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  630 PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEP 708
Cdd:PRK14960  436 PEPEPEPQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEPIGLFEASS 515

                         170       180
                  ....*....|....*....|....
gi 161086926  709 EPTTPKKPEPTTPKEPEPTTPKEP 732
Cdd:PRK14960  516 AEFSLAQDTSAYDLVSEPVIEQQS 539
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 640-707 7.60e-04

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 43.35  E-value: 7.60e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926   640 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 707
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 712-777 7.80e-04

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 43.35  E-value: 7.80e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926   712 TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 777
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 508-588 7.80e-04

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 43.45  E-value: 7.80e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  508 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 584
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPPA 98


                  ....
gi 161086926  585 LKEP 588
Cdd:NF041121   99 LPNP 102
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 687-759 8.02e-04

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 43.52  E-value: 8.02e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  687 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKEPEPTTRKEPEPT 759
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 648-713 8.22e-04

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 43.35  E-value: 8.22e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926   648 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 713
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 448-561 8.22e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 43.55  E-value: 8.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  448 TRKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPkepePTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 524
Cdd:PRK14951  380 TPARPEAAAPaaaPVAQAAAAPAPAAAPAAAASAPAA----PPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 161086926  525 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 561
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 572-645 8.72e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.73  E-value: 8.72e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  572 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 645
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111
PTZ00108 PTZ00108
DNA topoisomerase 2-like protein; Provisional
 563-779 8.74e-04

DNA topoisomerase 2-like protein; Provisional


Pssm-ID: 240271 [Multi-domain]  Cd Length: 1388  Bit Score: 43.88  E-value: 8.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  563 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPePTTPKEPEPTTLKEPEPTTPKEPEPTTTK 642
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNS-KRVDSDEKRKLDDKPDNKKSNSSGSDQED 1227

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  643 EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkepepTTPKKPEPTTPK 722
Cdd:PTZ00108 1228 DEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPS------KRPDGESNGGSK 1301

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  723 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-RKEPEPTTPKEPEPTTPKEPEPTTPKK 779
Cdd:PTZ00108 1302 PSSPTKKKVKKRLEGSLAALKKKKKSEKKTaRKKKSKTRVKQASASQSSRLLRRPRKK 1359
PRK10905 PRK10905
cell division protein DamX; Validated
 495-602 9.01e-04

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 43.00  E-value: 9.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  495 TTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPKEPEPTT---PKEPEPTTPKEPEPT--TPKEPEPTTPKEPepttP 569
Cdd:PRK10905  122 TLPTEPATVAPVRNGNASRQ--TAKTQTAERPATTRPARKQAviePKKPQATAKTEPKPVaqTPKRTEPAAPVAS----T 195

                          90       100       110
                  ....*....|....*....|....*....|....
gi 161086926  570 KEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTPK 602
Cdd:PRK10905  196 KAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
PRK14960 PRK14960
DNA polymerase III subunit gamma/tau;
617-756 9.74e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237868 [Multi-domain]  Cd Length: 702  Bit Score: 43.50  E-value: 9.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  617 PKEPEPTTLKEP-EPTTPKEP--EPTTTKEPESTTRKEPEPTT----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 689
Cdd:PRK14960  360 PLAPNEILVSEPvQQNGQAEVglNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPE 439

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926  690 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTRKEP 756
Cdd:PRK14960  440 PEPQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEP 507
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 580-659 9.81e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.73  E-value: 9.81e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  580 PEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE 659
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
648-708 1.01e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 43.45  E-value: 1.01e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  648 TRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 708
Cdd:COG5373    38 AEAAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PTZ00108 PTZ00108
DNA topoisomerase 2-like protein; Provisional
 507-734 1.02e-03

DNA topoisomerase 2-like protein; Provisional


Pssm-ID: 240271 [Multi-domain]  Cd Length: 1388  Bit Score: 43.50  E-value: 1.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  507 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 586
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASV-VGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQED 1227

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  587 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE--STTRKEPEPTTPKEPEPTT 664
Cdd:PTZ00108 1228 DEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPppSKRPDGESNGGSKPSSPTK 1307

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  665 PKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 734
Cdd:PTZ00108 1308 KKVKKRLEGSLAALKKKKKSEKKTaRKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSED 1378
PRK11633 PRK11633
cell division protein DedD; Provisional
 460-569 1.09e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 41.91  E-value: 1.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  460 PEPTTPKEPEPTTPKEPepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkEPEPTTPKEPEPTTPKE 539
Cdd:PRK11633   45 PKPGDRDEPDMMPAATQ--ALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEP------EPAPVEPPKPKPVEKPK 116

                          90       100       110
                  ....*....|....*....|....*....|
gi 161086926  540 PEPTTPKEPEPttPKEPEPTTPKEPEPTTP 569
Cdd:PRK11633  117 PKPKPQQKVEA--PPAPKPEPKPVVEEKAA 144
PHA03247 PHA03247
large tegument protein UL36; Provisional
 452-632 1.15e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.39  E-value: 1.15e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTP----KEPEPTTL---KEPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTP 521
Cdd:PHA03247  310 PAPPDPPPPAPAGDAEEEDDEDGAMEVVSPlprpRQHYPLGFpkrRRPTWTPPSSLEDLSAGRHHPkraSLPTRKRRSAR 389

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  522 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPT-TPKEPE-PTTPKEPEPTTlkEPEPTTPKEPE 597
Cdd:PHA03247  390 HAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPasAPPPPATPLPSaEPGSDDgPAPPPERQPPA--PATEPAPDDPD 467

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 161086926  598 PTTPKEPEptTLKEPEPTTPKEPEPTTLKEPEPTT 632
Cdd:PHA03247  468 DATRKALD--ALRERRPPEPPGADLAELLGRHPDT 500
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 684-756 1.28e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 42.75  E-value: 1.28e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  684 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEP 756
Cdd:PTZ00144  122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
PRK10819 PRK10819
transport protein TonB; Provisional
 692-812 1.31e-03

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 41.98  E-value: 1.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  692 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTRKEPEpttPKEPEPTTPK 770
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPK---PVKKVEEQPK 118

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 161086926  771 EPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKP 812
Cdd:PRK10819  119 REVKPVEPRPASPFENTAPARPTSSTATAAASKPVTSVSSGP 160
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 631-691 1.32e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.57  E-value: 1.32e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   631 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 691
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK10905 PRK10905
cell division protein DamX; Validated
 495-617 1.32e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 42.23  E-value: 1.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  495 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPKEPEPTT---PKEPEPTTPKEPEPT--TP 569
Cdd:PRK10905  106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQ--TAKTQTAERPATTRPARKQAviePKKPQATAKTEPKPVaqTP 183

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 161086926  570 KEPEPTTPKEPEPTtlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 617
Cdd:PRK10905  184 KRTEPAAPVASTKA----PAATSTPAPKETATTAPVQTASPAQTTATP 227
PRK10905 PRK10905
cell division protein DamX; Validated
 519-647 1.32e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 42.23  E-value: 1.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  519 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPKEPEPTT---PKEPEPTTLKEPEPT--TP 593
Cdd:PRK10905  106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQ--TAKTQTAERPATTRPARKQAviePKKPQATAKTEPKPVaqTP 183

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  594 KEPEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPEST 647
Cdd:PRK10905  184 KRTEPAAPVASTKA----PAATSTPAPKETATTAPVQTaSPAQTTATPAAGGKTA 234
PRK10905 PRK10905
cell division protein DamX; Validated
 527-666 1.32e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 42.23  E-value: 1.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  527 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTPKEPEP 606
Cdd:PRK10905  106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKP 178

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  607 TtlkepePTTPKEPEPTTlkepEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPK 666
Cdd:PRK10905  179 V------AQTPKRTEPAA----PVASTKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
643-746 1.33e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 42.42  E-value: 1.33e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  643 EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkkPEPTTPK 722
Cdd:PRK13335   69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTNTPQ 142

                          90       100
                  ....*....|....*....|....*
gi 161086926  723 EPEPTTPKEPE-PTTPKEPEPTTPK 746
Cdd:PRK13335  143 PMQSTKSDTPQsPTIKQAQTDMTPK 167
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 487-547 1.36e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.57  E-value: 1.36e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   487 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 547
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK10905 PRK10905
cell division protein DamX; Validated
 455-570 1.40e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 42.23  E-value: 1.40e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  455 TTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTPKEPEPTtpkepePTTPKEPEPTT 528
Cdd:PRK10905  122 TLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKPV------AQTPKRTEPAA 190

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 161086926  529 PKEPepttPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 570
Cdd:PRK10905  191 PVAS----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 663-723 1.41e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.57  E-value: 1.41e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   663 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 723
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 495-555 1.42e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.57  E-value: 1.42e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   495 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 555
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 519-579 1.42e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.57  E-value: 1.42e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   519 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 579
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 511-571 1.42e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.57  E-value: 1.42e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   511 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 571
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 503-563 1.42e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.57  E-value: 1.42e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   503 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 563
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 532-612 1.44e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 42.68  E-value: 1.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  532 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPPA 98


                  ....
gi 161086926  609 LKEP 612
Cdd:NF041121   99 LPNP 102
PHA03247 PHA03247
large tegument protein UL36; Provisional
 636-825 1.44e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.00  E-value: 1.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  636 PEPTTTKEPESTtrKEPEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTPK 706
Cdd:PHA03247  255 PAPPPVVGEGAD--RAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDG 332

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  707 EPEPTTP---------------KKPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 768
Cdd:PHA03247  333 AMEVVSPlprprqhyplgfpkrRRPTWTPPSSLEDLSAGRHHPkraSLPTRKRRSARHAATPFARGPGGDDQTRPAAPVP 412

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  769 PKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDS 825
Cdd:PHA03247  413 ASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDA 469
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 527-636 1.45e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 42.68  E-value: 1.45e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  527 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 606
Cdd:PHA03264  253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331

                          90       100       110
                  ....*....|....*....|....*....|
gi 161086926  607 TTLKEPEPTTPKEPEPTtlkePEPTTPKEP 636
Cdd:PHA03264  332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
PTZ00108 PTZ00108
DNA topoisomerase 2-like protein; Provisional
 587-826 1.48e-03

DNA topoisomerase 2-like protein; Provisional


Pssm-ID: 240271 [Multi-domain]  Cd Length: 1388  Bit Score: 43.11  E-value: 1.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  587 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPK 666
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDD 1228

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  667 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKKPEPTTPKEPEPTTPKepepTTPKEPEPTTPK 746
Cdd:PTZ00108 1229 EEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFS---SDDLSKEGKPKNAPKRVSAVQYSPPPPS----KRPDGESNGGSK 1301

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  747 EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP--KKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN-KPEET--TPASED 821
Cdd:PTZ00108 1302 PSSPTKKKVKKRLEGSLAALKKKKKSEKKTArkKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDdDDSEVddSEDEDD 1381


                  ....*
gi 161086926  822 SDDSK 826
Cdd:PTZ00108 1382 EDDED 1386
MDN1 COG5271
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ...
 446-825 1.49e-03

Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444083 [Multi-domain]  Cd Length: 1028  Bit Score: 43.08  E-value: 1.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 524
Cdd:COG5271   280 GLEAAEDDALDAELTAAQaADPESDDDADDSTLAALEGAAEDTEIATADELAAADDEDDDDSAAEDAAEEAATAEDSAAE 359

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  525 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 604
Cdd:COG5271   360 DTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASAGETEDESTDVTSA 439

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  605 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTkEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 684
Cdd:COG5271   440 EDDIATDEEADSLADEEEEAEAELDTEEDTESAEEDA-DGDEATDEDDASDDGDEEEAEEDAEAEADSDELTAEETSADD 518

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  685 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEP 764
Cdd:COG5271   519 GADTDAAADPEDSDEDALEDETEGEENAPG-SDQDADETDEPEATAEEDEPDEAEAETEDATENADADETEESADESEEA 597

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  765 EPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLApkvTAPAEEIQNKPEETTPASEDSDDS 825
Cdd:COG5271   598 EASEDEAAEEEEADDDEADADADGAADEEETEEE---AAEDEAAEPETDASEAADEDADAE 655
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 604-687 1.59e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.96  E-value: 1.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  604 PEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKE 683
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAP--AAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAA-AAVE 114


                  ....
gi 161086926  684 PEPT 687
Cdd:PRK12270  115 DEVT 118
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 479-584 1.64e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 42.30  E-value: 1.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  479 TTPKEPEPTTLKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 558
Cdd:PHA03264  253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331

                          90       100
                  ....*....|....*....|....*..
gi 161086926  559 TTPKEPEPTTPKEP-EPTTPKEPEPTT 584
Cdd:PHA03264  332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 451-549 1.73e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 42.39  E-value: 1.73e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 529
Cdd:PRK14951  394 VAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVA 473

                          90       100
                  ....*....|....*....|
gi 161086926  530 KEPEPTTPKEPEPTTPKEPE 549
Cdd:PRK14951  474 SAAPAPAAAPAAARLTPTEE 493
PRK12757 PRK12757
cell division protein FtsN; Provisional
 485-565 1.76e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 41.57  E-value: 1.76e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  485 EPTTLKE-PE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 562
Cdd:PRK12757   98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177


                  ...
gi 161086926  563 EPE 565
Cdd:PRK12757  178 EKE 180
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 471-531 1.87e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.19  E-value: 1.87e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   471 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 531
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 479-539 1.90e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 42.19  E-value: 1.90e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   479 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 539
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
522-580 1.93e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.68  E-value: 1.93e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  522 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 580
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
490-548 1.93e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.68  E-value: 1.93e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  490 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 548
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
498-556 1.93e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.68  E-value: 1.93e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  498 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 556
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
506-564 1.93e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.68  E-value: 1.93e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  506 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 564
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
514-572 1.93e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.68  E-value: 1.93e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  514 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 572
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 452-636 1.96e-03

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 42.22  E-value: 1.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPT----TPKEPEPTTPKEPEPTT---PKEPEPTTLKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPK 522
Cdd:PLN03209  388 PTPPSSSPASSKsvdaVAKPAEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS 467

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  523 epEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPK 602
Cdd:PLN03209  468 --TSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALA 542

                         170       180       190
                  ....*....|....*....|....*....|....
gi 161086926  603 EPEPTTLKEPEPTTPKePEPTTLKEPEPTTPKEP 636
Cdd:PLN03209  543 DEQHHAQPKPRPLSPY-TMYEDLKPPTSPTPSPV 575
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
658-716 1.99e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.29  E-value: 1.99e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  658 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKKP 716
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
466-532 1.99e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.29  E-value: 1.99e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  466 KEPEPTTPKEPEPTTPKEPEpttlkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 532
Cdd:COG5373    40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PRK10905 PRK10905
cell division protein DamX; Validated
 463-578 2.00e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 41.85  E-value: 2.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  463 TTPKEPEPTTPKEPEPTTPKEPepTTLKEPEPTTPKEPEPTT---PKEPEPTTPKEPEPTtpkepePTTPKEPEPTTPKE 539
Cdd:PRK10905  122 TLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAviePKKPQATAKTEPKPV------AQTPKRTEPAAPVA 193

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 161086926  540 PepttPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 578
Cdd:PRK10905  194 S----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 463-523 2.04e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 41.80  E-value: 2.04e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   463 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 523
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PHA03377 PHA03377
EBNA-3C; Provisional
 449-777 2.07e-03

EBNA-3C; Provisional


Pssm-ID: 177614 [Multi-domain]  Cd Length: 1000  Bit Score: 42.35  E-value: 2.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  449 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPT 527
Cdd:PHA03377  549 RATPPKVSPSDRGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGPhEKQPPSSAPRDMAPS 628

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  528 TPKE-------PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 598
Cdd:PHA03377  629 VVRMflrerllEQSTGPKPKSFWEMRAGRDGSGIQQEPSSRRQPatQSTPPRPSWLPSVFVLPSVDAGRAQPSEESHLSS 708

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  599 TTPKEP----EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE--PEPTTTKEPESTTRKEPEPTTP----KEPEPTTPKEP 668
Cdd:PHA03377  709 MSPTQPisheEQPRYEDPDDPLDLSLHPDQAPPPSHQAPYSghEEPQAQQAPYPGYWEPRPPQAPylgyQEPQAQGVQVS 788

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  669 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEP 748
Cdd:PHA03377  789 SYPGYAGPWGLRAQHPRYRHSWAYWSQYPGHGHPQGPWAPRPPHLPPQWDGSAGHGQDQVSQFP----HLQSETGPPRLQ 864

                         330       340
                  ....*....|....*....|....*....
gi 161086926  749 EPTTRKEPEPTTPKEPEPTTPKEPEPTTP 777
Cdd:PHA03377  865 LSQVPQLPYSQTLVSSSAPSWSSPQPRAP 893
PRK12757 PRK12757
cell division protein FtsN; Provisional
 696-765 2.08e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 41.57  E-value: 2.08e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  696 TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 765
Cdd:PRK12757  111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
663-746 2.16e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 41.54  E-value: 2.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  663 TTPKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKE-PEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKepEPTTPKEP 740
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPST----KVEAPQSkPNATTPPSTKVEAPQqTPNATTPSSTKVETPQ--SPTTKQVP 96


                  ....*.
gi 161086926  741 EPTTPK 746
Cdd:PRK13042   97 TEINPK 102
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
666-724 2.17e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 42.29  E-value: 2.17e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  666 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKKPEPTTPKEP 724
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
576-674 2.23e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 41.65  E-value: 2.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  576 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKepePTTTKEPESTTRKEPEPT 655
Cdd:PRK13335   73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK---TKVTTPPSTNTPQPMQST 147

                          90       100
                  ....*....|....*....|
gi 161086926  656 TPKEPE-PTTPKEPEPTTPK 674
Cdd:PRK13335  148 KSDTPQsPTIKQAQTDMTPK 167
rne PRK10811
ribonuclease E; Reviewed
 654-819 2.33e-03

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 42.33  E-value: 2.33e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  654 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPE 733
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVIA 921

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  734 PTTPKEPEPTTPKE---PEPTTRkEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTTSPKTTTLKATTLAPKVTAPAEE 807
Cdd:PRK10811  922 APVTEQPQVITESDvavAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVAQPAAPVVAEVAAEVETVTAVEPE 1000

                         170
                  ....*....|..
gi 161086926  808 IQNKPEETTPAS 819
Cdd:PRK10811 1001 VAPAQVPEATVE 1012
PRK11633 PRK11633
cell division protein DedD; Provisional
 684-779 2.37e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 40.76  E-value: 2.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  684 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 762
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90
                  ....*....|....*..
gi 161086926  763 EPEPTTPKEPEPTTPKK 779
Cdd:PRK11633  124 KVEAPPAPKPEPKPVVE 140
PRK10905 PRK10905
cell division protein DamX; Validated
 454-546 2.57e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 41.46  E-value: 2.57e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  454 PTTPKEPEPTTPKEPEPTT---PKEPEPTTPKEPEPTtlkepePTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPK 530
Cdd:PRK10905  143 AKTQTAERPATTRPARKQAviePKKPQATAKTEPKPV------AQTPKRTEPAAPVAS----TKAPAATSTPAPKETATT 212

                          90
                  ....*....|....*..
gi 161086926  531 EPEPT-TPKEPEPTTPK 546
Cdd:PRK10905  213 APVQTaSPAQTTATPAA 229
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 660-732 2.64e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.59  E-value: 2.64e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  660 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 732
Cdd:PTZ00144  122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 623-683 2.69e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 41.42  E-value: 2.69e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   623 TTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 683
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 495-563 2.71e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.59  E-value: 2.71e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  495 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 563
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 503-571 2.71e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.59  E-value: 2.71e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  503 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 571
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 511-579 2.71e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.59  E-value: 2.71e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  511 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 579
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
474-540 2.82e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.91  E-value: 2.82e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  474 KEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 540
Cdd:COG5373    40 AAEAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 645-744 2.89e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 41.53  E-value: 2.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  645 ESTTRKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 724
Cdd:PHA03264  259 EESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPDADRPEG 337

                          90       100
                  ....*....|....*....|.
gi 161086926  725 EPTTPKEP-EPTTPKEPEPTT 744
Cdd:PHA03264  338 WPSLEAITfPPPTPATPAVPR 358
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 518-939 3.00e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 3.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  518 PTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTLKEPEPTTPKEP 596
Cdd:PRK07764  390 GAGAPAAAAPSAAAAAPA-AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNApAGGAPSPPPAAAPSAQPAP 468

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  597 EPTTPkePEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTT-------------KEPESTTR-KEPEPTtPKEPEP 662
Cdd:PRK07764  469 APAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATlrerwpeilaavpKRSRKTWAiLLPEAT-VLGVRG 545

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  663 TT----------------PKEPE--------------------PTTPKEPEPTTPKEPEPTTPKEPEPttpkepEPTTPK 706
Cdd:PRK07764  546 DTlvlgfstgglarrfasPGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAA------RPAAPA 619

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  707 EPEPTTPKKPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPTTT 785
Cdd:PRK07764  620 APAAPAAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGAAP 698

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  786 SPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSkttlkpqkptkapkptkkptkapkkptstkkpktpktrkp 865
Cdd:PRK07764  699 AQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDP---------------------------------------- 738

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  866 kttpsplkttsatpelntTPLEVMLPTTTIPKQTPNPETAEVNPDHEDADGGEGEKPLIPGPPVLFPTAIPGTD 939
Cdd:PRK07764  739 ------------------VPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
463-554 3.04e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 41.16  E-value: 3.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  463 TTPKEPEPTTPKEPEPTTPKEPEPTTlkepeptTPKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepE 541
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPST-------KVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--S 89

                          90
                  ....*....|...
gi 161086926  542 PTTPKEPEPTTPK 554
Cdd:PRK13042   90 PTTKQVPTEINPK 102
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
632-738 3.08e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 41.27  E-value: 3.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  632 TPKEPEPTTTKEPESTTRKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkePEPT 711
Cdd:PRK13335   68 TRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTN 139

                          90       100
                  ....*....|....*....|....*...
gi 161086926  712 TPKKPEPTTPKEPE-PTTPKEPEPTTPK 738
Cdd:PRK13335  140 TPQPMQSTKSDTPQsPTIKQAQTDMTPK 167
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 524-596 3.11e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.59  E-value: 3.11e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  524 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 596
Cdd:PTZ00144  122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 687-747 3.12e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 41.42  E-value: 3.12e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   687 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 747
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
dnaA PRK14086
chromosomal replication initiator protein DnaA;
629-822 3.13e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 41.73  E-value: 3.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  629 EPTTPKEPEPTTTKEPESTT--RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPtTPKEPEPTTPK 706
Cdd:PRK14086   93 GEPAPPPPHARRTSEPELPRpgRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAY---QQRPEPGA-WPRAADDYGWQ 168

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  707 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPKEPEPTTPkEPEPTTPKKPEPTTTS 786
Cdd:PRK14086  169 QQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPR--PDWDRPRRDRTDRP-EPPPGAGHVHRGGPGP 245

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 161086926  787 PKTTTLKATTLAPKvtAPAEEIQNKPEETTPASEDS 822
Cdd:PRK14086  246 PERDDAPVVPIRPS--APGPLAAQPAPAPGPGEPTA 279
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 679-739 3.15e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 41.42  E-value: 3.15e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   679 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 739
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 644-727 3.16e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.59  E-value: 3.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  644 PESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKKPEPTTPKE 723
Cdd:PTZ00144  114 PLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPK----AAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARAD 186


                  ....
gi 161086926  724 PEPT 727
Cdd:PTZ00144  187 PRET 190
PRK01297 PRK01297
ATP-dependent RNA helicase RhlB; Provisional
 654-717 3.17e-03

ATP-dependent RNA helicase RhlB; Provisional


Pssm-ID: 234938 [Multi-domain]  Cd Length: 475  Bit Score: 41.44  E-value: 3.17e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  654 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPE 717
Cdd:PRK01297   13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
dnaA PRK14086
chromosomal replication initiator protein DnaA;
555-759 3.19e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 41.73  E-value: 3.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  555 EPEPTTPkepePTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEPttlkePEPTT-P 633
Cdd:PRK14086   93 GEPAPPP----PHARRTSEPELPRPGRRPYEGYGGP----RADDRPPGLPRQDQLPTARPAYPAYQQR-----PEPGAwP 159

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  634 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkEPEPTTP 713
Cdd:PRK14086  160 RAADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAG 236

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 161086926  714 KKPEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPEPTTRKEPEPT 759
Cdd:PRK14086  237 HVHRGGPGPPERDDAPVVPIrpsaPGPLAAQPAPAPGPGEPTARLNPKYT 286
PRK11633 PRK11633
cell division protein DedD; Provisional
 580-681 3.19e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 40.37  E-value: 3.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  580 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPK 658
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATV--APPNTPVEPEPAPVEPPKPKPVEKPKPKPKP 121

                          90       100
                  ....*....|....*....|...
gi 161086926  659 EPEPTTPKEPEPTTPKEPEPTTP 681
Cdd:PRK11633  122 QQKVEAPPAPKPEPKPVVEEKAA 144
PRK01297 PRK01297
ATP-dependent RNA helicase RhlB; Provisional
 678-753 3.20e-03

ATP-dependent RNA helicase RhlB; Provisional


Pssm-ID: 234938 [Multi-domain]  Cd Length: 475  Bit Score: 41.44  E-value: 3.20e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  678 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 753
Cdd:PRK01297   13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKTR 88
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
626-692 3.21e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.91  E-value: 3.21e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  626 KEPEPTTPKEPEPTTTKEPEsttrkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 692
Cdd:COG5373    40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
587-698 3.22e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 41.27  E-value: 3.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  587 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEpEPTTLKEPEPTTPKEPEPTTTkePESTTRKePEPTTPkepePTTPK 666
Cdd:PRK13335   69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQTT--TESTTPK-TKVTTP----PSTNT 140

                          90       100       110
                  ....*....|....*....|....*....|..
gi 161086926  667 EPEPTTPKEPEPTTpkepePTTPKEPEPTTPK 698
Cdd:PRK13335  141 PQPMQSTKSDTPQS-----PTIKQAQTDMTPK 167
PRK11633 PRK11633
cell division protein DedD; Provisional
 484-582 3.28e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 40.37  E-value: 3.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  484 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 562
Cdd:PRK11633   45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123

                          90       100
                  ....*....|....*....|.
gi 161086926  563 EPE-PTTPKePEPTTPKEPEP 582
Cdd:PRK11633  124 KVEaPPAPK-PEPKPVVEEKA 143
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 473-539 3.30e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.21  E-value: 3.30e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  473 PKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 539
Cdd:PTZ00144  124 PPAAAPAAAAAAKAEK-TTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
448-508 3.32e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.91  E-value: 3.32e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  448 TRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEP 508
Cdd:COG5373    38 AEAAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAA-EAPAPAAAAPPAEAEPAAA 100
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 671-731 3.40e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 41.42  E-value: 3.40e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   671 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 731
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 663-735 3.54e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.21  E-value: 3.54e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  663 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpePTTPKEPEPTTPKEPEPT 735
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPA---PAAKPPPTPVARADPRET 190
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 500-575 3.57e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.53  E-value: 3.57e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  500 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 575
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
PRK01297 PRK01297
ATP-dependent RNA helicase RhlB; Provisional
 662-725 3.58e-03

ATP-dependent RNA helicase RhlB; Provisional


Pssm-ID: 234938 [Multi-domain]  Cd Length: 475  Bit Score: 41.44  E-value: 3.58e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  662 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE 725
Cdd:PRK01297   13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 676-751 3.60e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.53  E-value: 3.60e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  676 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 751
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 468-551 3.63e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.53  E-value: 3.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  468 PEPTTPKEPEPTTPKEPEPTtlkePEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 547
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93


                  ....
gi 161086926  548 PEPT 551
Cdd:NF041121   94 PAPP 97
PRK10905 PRK10905
cell division protein DamX; Validated
 631-761 3.65e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 41.08  E-value: 3.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  631 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEpttpkEP 708
Cdd:PRK10905  106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEPKKpqATAKTEP-----KP 178

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 161086926  709 EPTTPKKPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 761
Cdd:PRK10905  179 VAQTPKRTEPAAPVAS----TKAPAATSTPAPKETATTAPVQTASPAQTTATP 227
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 671-743 3.66e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.21  E-value: 3.66e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  671 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKKPEPTtpkEPEPTTPKEPEPTTPKEPEPT 743
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
PRK12757 PRK12757
cell division protein FtsN; Provisional
 680-753 3.72e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 40.41  E-value: 3.72e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  680 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 753
Cdd:PRK12757  111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKEKEQR 184
PRK14949 PRK14949
DNA polymerase III subunits gamma and tau; Provisional
 645-822 3.72e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237863 [Multi-domain]  Cd Length: 944  Bit Score: 41.63  E-value: 3.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  645 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT--TPK 722
Cdd:PRK14949  633 EGDGKKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYdrPPW 712

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  723 EPEPTTpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPkkpeptttspktttlkatTLAPKVT 802
Cdd:PRK14949  713 EEAPEV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQATHQPQVQAEAQSP------------------ASTTALT 772

                         170       180
                  ....*....|....*....|
gi 161086926  803 APAEEIQNKPEETTPASEDS 822
Cdd:PRK14949  773 QTSSEVQDTELNLVLLSSGS 792
PRK12757 PRK12757
cell division protein FtsN; Provisional
 672-741 3.75e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 40.41  E-value: 3.75e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  672 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPE 741
Cdd:PRK12757  111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
446-538 3.76e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.77  E-value: 3.76e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  446 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkepepttlkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKe 523
Cdd:PRK13042   22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK------------PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ- 88

                          90
                  ....*....|....*
gi 161086926  524 pEPTTPKEPEPTTPK 538
Cdd:PRK13042   89 -SPTTKQVPTEINPK 102
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 449-539 3.84e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 41.39  E-value: 3.84e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  449 RKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTL-KEPEPTTPKEPEPTTP---KEPEPTTPKEPEP--TTPK 522
Cdd:PRK07994  430 QRAQGATKAKKSEPAAASRARPV-NSALERLASVRPAPSALeKAPAKKEAYRWKATNPvevKKEPVATPKALKKalEHEK 508

                          90
                  ....*....|....*..
gi 161086926  523 EPEPTTPKEPEPTTPKE 539
Cdd:PRK07994  509 TPELAAKLAAEAIERDP 525
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
640-762 3.86e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 40.88  E-value: 3.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  640 TTKEPESTTRKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKkPEPT 719
Cdd:PRK13335   60 SATTQAANTRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVT 133

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 161086926  720 TPkePEPTTPKEPEPTTPKEPEpttpkepEPTTRKEPEPTTPK 762
Cdd:PRK13335  134 TP--PSTNTPQPMQSTKSDTPQ-------SPTIKQAQTDMTPK 167
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
682-740 3.87e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.52  E-value: 3.87e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  682 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPkKPEPTTPKEPEPTTPKEPEPTTPKEP 740
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPAAA 100
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 540-628 3.89e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.14  E-value: 3.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  540 PEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTtlkEPEPTTP-K 618
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPP--PAAPPSPPGDPPEPPAPEPAPLPAPYPGSL-APPPPPPPGPAGA---APGAALPvR 92

                          90
                  ....*....|
gi 161086926  619 EPEPTTLKEP 628
Cdd:NF041121   93 VPAPPALPNP 102
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
538-596 3.90e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.52  E-value: 3.90e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  538 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTLKEPEPTTPKEP 596
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PRK01297 PRK01297
ATP-dependent RNA helicase RhlB; Provisional
 670-733 3.97e-03

ATP-dependent RNA helicase RhlB; Provisional


Pssm-ID: 234938 [Multi-domain]  Cd Length: 475  Bit Score: 41.05  E-value: 3.97e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  670 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPE 733
Cdd:PRK01297   13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
ftsN TIGR02223
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ...
 558-739 3.97e-03

cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]


Pssm-ID: 274041 [Multi-domain]  Cd Length: 298  Bit Score: 40.83  E-value: 3.97e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   558 PTTPKEPePTTPKEPEPTTPKEPEPTTLKEPEPTTPKEpepttpkEPEPTTLKEPEPTTPKEP-EPTTLKEPEPTTPKEP 636
Cdd:TIGR02223   48 LTESKQA-NEPETLQPKNQTENGETAADLPPKPEERWS-------YIEELEAREVLINDPEEPsNGGGVEESAQLTAEQR 119

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   637 EPTTTKEPESTTRKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKK 715
Cdd:TIGR02223  120 QLLEQMQADMRAAEKVLATAPSEQT-VAVEARKQTAEKKPQKARTAEAQKTPVEtEKIASKVKEAKQKQKALPKQTAETQ 198

                          170       180
                   ....*....|....*....|....
gi 161086926   716 PEPTTPKEPEPTTPKEPEPTTPKE 739
Cdd:TIGR02223  199 SNSKPIETAPKADKADKTKPKPKE 222
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 567-647 3.99e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.21  E-value: 3.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  567 TTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTTKEPES 646
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAA----KAEKTTPEKPKAAAPTPEPP---AASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRE 189


                  .
gi 161086926  647 T 647
Cdd:PTZ00144  190 T 190
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
698-764 4.03e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.52  E-value: 4.03e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  698 KEPEPTTPKEPEPTTPKKPEpttpkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTRKEPEPTTPKEP 764
Cdd:COG5373    40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 460-543 4.06e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.14  E-value: 4.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  460 PEPTTPKEPEPTTPKEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 539
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPP-----SPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93


                  ....
gi 161086926  540 PEPT 543
Cdd:NF041121   94 PAPP 97
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
527-618 4.14e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.77  E-value: 4.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  527 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKEpepttlkEPEPTTPKEPEPTTPKepE 605
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQ-------TPNATTPSSTKVETPQ--S 89

                          90
                  ....*....|...
gi 161086926  606 PTTLKEPEPTTPK 618
Cdd:PRK13042   90 PTTKQVPTEINPK 102
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 652-726 4.16e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 41.14  E-value: 4.16e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  652 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPkEPEPTTPKKPEPTTPKEPEP 726
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAPGAALP 90
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 535-595 4.34e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 41.03  E-value: 4.34e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   535 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 595
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK14960 PRK14960
DNA polymerase III subunit gamma/tau;
686-766 4.35e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237868 [Multi-domain]  Cd Length: 702  Bit Score: 41.19  E-value: 4.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  686 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTT----PKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 761
Cdd:PRK14960  360 PLAPNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPE 439


                  ....*
gi 161086926  762 KEPEP 766
Cdd:PRK14960  440 PEPQP 444
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
418-601 4.38e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.40  E-value: 4.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  418 KEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPttlkePEPT 495
Cdd:PRK12323  398 APAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASarGPGGAPAPAPAPAAAPAAAARPAAAG-----PRPV 472

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  496 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 573
Cdd:PRK12323  473 AAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPR 552

                         170       180
                  ....*....|....*....|....*...
gi 161086926  574 PTTPKEPEPTtlkepePTTPKEPEPTTP 601
Cdd:PRK12323  553 AAAATEPVVA------PRPPRASASGLP 574
PHA03169 PHA03169
hypothetical protein; Provisional
 498-706 4.39e-03

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 41.11  E-value: 4.39e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  498 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK--EPEPT 575
Cdd:PHA03169   44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAEELASglSPENT 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  576 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkEPESTTRKEPEPT 655
Cdd:PHA03169  124 SGSSPESPASHSPPPSPPSHPGPHEPAPPESHN-PSPNQQPSSFLQPSHEDSPEEPEPPTSEP----EPDSPGPPQSETP 198

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 161086926  656 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 706
Cdd:PHA03169  199 TSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
511-594 4.49e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.39  E-value: 4.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  511 TTPKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKE-PEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTLKEP 588
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPST----KVEAPQSkPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96


                  ....*.
gi 161086926  589 EPTTPK 594
Cdd:PRK13042   97 TEINPK 102
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 668-740 4.54e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.82  E-value: 4.54e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 161086926  668 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 740
Cdd:PTZ00144  122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
627-730 4.59e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 40.88  E-value: 4.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  627 EPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEpEPTTPKEPEPTTPKEPEP-TTPKEPEPTtpkePEPTTPkePEPTTP 705
Cdd:PRK13335   69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSqTTTESTTPK----TKVTTP--PSTNTP 141

                          90       100
                  ....*....|....*....|....*.
gi 161086926  706 KEPEPTTPKKPE-PTTPKEPEPTTPK 730
Cdd:PRK13335  142 QPMQSTKSDTPQsPTIKQAQTDMTPK 167
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
496-594 4.63e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 40.88  E-value: 4.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  496 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkePEPTTPKEPEPT 575
Cdd:PRK13335   73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTNTPQPMQST 147

                          90       100
                  ....*....|....*....|
gi 161086926  576 TPKEPEPTTLKEPEP-TTPK 594
Cdd:PRK13335  148 KSDTPQSPTIKQAQTdMTPK 167
PHA03169 PHA03169
hypothetical protein; Provisional
 451-578 4.70e-03

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 40.72  E-value: 4.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  451 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 528
Cdd:PHA03169  119 SPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHN-PSPNQQPSSFLQPSHEDSPEEPEPptSEPEPDSPGPPQSET 197

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 161086926  529 PKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPK 578
Cdd:PHA03169  198 PTSSPPPQSPPDEPGEPQSPTPQQAPSPNtqQAVEHEDEPTEPEREGPPFPG 249
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
690-753 4.74e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.14  E-value: 4.74e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  690 KEPEPTTPKEPEPT---TPKEPEPTTPKKPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTR 753
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAAPAAAS 105
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 572-683 4.85e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 40.99  E-value: 4.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  572 PEPTTPKEPEPTTLkepEPTTPKEPEPTTPKEPEPTTLkepePTTPkePEPTTlkEPEPTTPKEPEPTTTKePESTTRKE 651
Cdd:COG3266   267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVAL----PAAP--AAAAA--AAAPAEAAAPQPTAAK-PVVTETAA 334

                          90       100       110
                  ....*....|....*....|....*....|..
gi 161086926  652 PEPTTPKEPEPTTPkepePTTPKEPEPTTPKE 683
Cdd:COG3266   335 PAAPAPEAAAAAAA----PAAPAVAKKLAADE 362
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 591-696 4.85e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 40.76  E-value: 4.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  591 TTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEP 670
Cdd:PHA03264  253 VVPPYFEESKGYEPPPAP-SGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331

                          90       100
                  ....*....|....*....|....*..
gi 161086926  671 TTPKEPEPTTPKEP-EPTTPKEPEPTT 696
Cdd:PHA03264  332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 708-777 4.94e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.76  E-value: 4.94e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  708 PEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPkEPEPTTPKEPEPTTP 777
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAP 85
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 446-507 4.98e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 40.65  E-value: 4.98e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926   446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 507
Cdd:TIGR00601   81 TGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 628-711 5.03e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.76  E-value: 5.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  628 PEPTTPKEPEPTTTKEPESTtrkePEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 707
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93


                  ....
gi 161086926  708 PEPT 711
Cdd:NF041121   94 PAPP 97
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 638-805 5.04e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 40.73  E-value: 5.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  638 PTTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK 715
Cdd:PRK13108  276 PKGREAPGALRGSEYVVDEALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADR 355

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  716 PEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE-PTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKA 794
Cdd:PRK13108  356 DGESTPA-VEETSEADIEREQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV 434

                         170
                  ....*....|.
gi 161086926  795 TTLAPKVTAPA 805
Cdd:PRK13108  435 AGPGDDPAEPD 445
PRK12757 PRK12757
cell division protein FtsN; Provisional
 512-581 5.08e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 40.03  E-value: 5.08e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  512 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 581
Cdd:PRK12757  111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
458-524 5.16e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.14  E-value: 5.16e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  458 KEPEPTTPKEPEPTTPKEPEpttpkEPEPTTLKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 524
Cdd:COG5373    40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 631-699 5.49e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.82  E-value: 5.49e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  631 TTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 699
Cdd:PTZ00144  120 TGGAPPaAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
NESP55 pfam06390
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ...
 451-566 5.79e-03

Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.


Pssm-ID: 115071 [Multi-domain]  Cd Length: 261  Bit Score: 40.23  E-value: 5.79e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   451 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 530
Cdd:pfam06390  139 EPDTAPTTEPETEPEDEPGPVVPKGATFHQSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPE 218

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 161086926   531 E-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 566
Cdd:pfam06390  219 EeEEEKEEEKQQPHRCKPKKPARRRDPSPESPPKKGA 255
ZipA COG3115
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 586-695 5.86e-03

Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442349 [Multi-domain]  Cd Length: 298  Bit Score: 40.06  E-value: 5.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  586 KEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPkEPEpttLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 665
Cdd:COG3115    54 RVVAAEAPERVEPEASFDAEDEV-REPDQEEV-DPL---LDDEADIEAAPAEPVRWAGTAAAVEPAPEQEAYEEAGPAGE 128

                          90       100       110
                  ....*....|....*....|....*....|
gi 161086926  666 kEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 695
Cdd:COG3115   129 -SAEQEDAPAEEPEAEAPAEEALAAELCAE 157
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
653-813 5.88e-03

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 40.42  E-value: 5.88e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   653 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTT---PKEPEPTTP 729
Cdd:pfam05539  167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   730 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAeeIQ 809
Cdd:pfam05539  247 PQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPHSSPPG--VQ 324


                   ....
gi 161086926   810 NKPE 813
Cdd:pfam05539  325 ANPT 328
PRK01297 PRK01297
ATP-dependent RNA helicase RhlB; Provisional
 518-592 5.94e-03

ATP-dependent RNA helicase RhlB; Provisional


Pssm-ID: 234938 [Multi-domain]  Cd Length: 475  Bit Score: 40.67  E-value: 5.94e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  518 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 592
Cdd:PRK01297   13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKT 87
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 732-830 5.99e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 41.03  E-value: 5.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  732 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKpeptttspkttTLKATTLAPKVTAPAEeiqnK 811
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPK-----------PAAAAAAAAAPAAPPA----A 102

                          90
                  ....*....|....*....
gi 161086926  812 PEETTPASEDSDDSKTTLK 830
Cdd:PRK12270  103 AAAAAPAAAAVEDEVTPLR 121
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 700-813 5.99e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.85  E-value: 5.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  700 PEPTTPKEPEPTTP-KKPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 775
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAApaaAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 161086926  776 TPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPE 813
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 488-553 6.03e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.44  E-value: 6.03e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  488 TLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTP 553
Cdd:PTZ00144  117 EIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASK-PTPPAAAKPPEPAPAAKPPPTP 181
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
410-577 6.16e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.63  E-value: 6.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  410 KKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTtpKEPEPTTPKEPEPTTP---KEPEPTTPKEPEP 486
Cdd:PRK12323  402 PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPAPAPAAAPAAAARpaaAGPRPVAAAAAAA 479

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  487 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 564
Cdd:PRK12323  480 PARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP 559

                         170
                  ....*....|....*
gi 161086926  565 E--PTTPKEPEPTTP 577
Cdd:PRK12323  560 VvaPRPPRASASGLP 574
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 660-734 6.18e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.76  E-value: 6.18e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  660 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkkpEPTTPKEPEPTTPKEPEP 734
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAP---PPPPPPGPAGAAPGAALP 90
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 559-619 6.24e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 40.26  E-value: 6.24e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   559 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 619
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
546-604 6.32e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.75  E-value: 6.32e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  546 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEP 604
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAA-EAPAPAAAAPPAEAEPAAA 100
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 516-591 6.41e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.44  E-value: 6.41e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  516 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPkepeptTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPT 591
Cdd:PTZ00144  122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAAS------KPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
722-779 6.43e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.75  E-value: 6.43e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  722 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPtTRKEPEPTTPKEPEPTTPKEPEPTTPKK 779
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVP-EAPAAPPAAAEAPAPAAAAPPAEAEPAA 99
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 575-635 6.51e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 40.26  E-value: 6.51e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   575 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 635
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
wall_bind_EntB NF040676
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ...
 625-822 6.66e-03

cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.


Pssm-ID: 468642 [Multi-domain]  Cd Length: 476  Bit Score: 40.54  E-value: 6.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  625 LKEPEPTTPKEPEPT--TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE--- 699
Cdd:NF040676  141 LSSTAPTEKKADEKTkqVAKVQKSVKAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQEVVKPKEEPKVQEIVKPKEevk 220

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  700 -PEPTTPKEPEpttpKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 778
Cdd:NF040676  221 vQEEVKPKEEE----KVQEIVKPKEEAKVQEEVKVKEEAKVQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEI 296

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 161086926  779 KPEPTTTSPKTTTLKATTLAPKVTAPAEEiQNKPEETTPASEDS 822
Cdd:NF040676  297 AKAKEEEKAQEIAKAKEEAKAREIAKAKE-EEKAREIAKAKEEA 339
ZipA COG3115
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 450-559 6.75e-03

Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442349 [Multi-domain]  Cd Length: 298  Bit Score: 40.06  E-value: 6.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  450 KEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPkEPEpttLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 529
Cdd:COG3115    54 RVVAAEAPERVEPEASFDAE-DEVREPDQEEV-DPL---LDDEADIEAAPAEPVRWAGTAAAVEPAPEQEAYEEAGPAGE 128

                          90       100       110
                  ....*....|....*....|....*....|
gi 161086926  530 kEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 559
Cdd:COG3115   129 -SAEQEDAPAEEPEAEAPAEEALAAELCAE 157
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
678-821 6.82e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.63  E-value: 6.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  678 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 757
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161086926  758 PTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASED 821
Cdd:PRK12323  452 PAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPD 515
PRK14949 PRK14949
DNA polymerase III subunits gamma and tau; Provisional
 577-732 6.91e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237863 [Multi-domain]  Cd Length: 944  Bit Score: 40.86  E-value: 6.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  577 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 656
Cdd:PRK14949  637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDRPPWEEAP 716

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  657 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 732
Cdd:PRK14949  717 EVASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 684-807 6.93e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.47  E-value: 6.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  684 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 762
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 161086926  763 EPEPTTPKEPEPTTPkkpepTTTSPKTTTLKATTLAPKVTAPAEE 807
Cdd:PRK14951  454 QAAPETVAIPVRVAP-----EPAVASAAPAPAAAPAAARLTPTEE 493
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 479-547 6.98e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.44  E-value: 6.98e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  479 TTPKEPEPTTLKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 547
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 454-544 7.28e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 40.37  E-value: 7.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  454 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP- 532
Cdd:PHA03264  267 PPAPSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPDADRPEGWPSLEAITf 346

                          90
                  ....*....|..
gi 161086926  533 EPTTPKEPEPTT 544
Cdd:PHA03264  347 PPPTPATPAVPR 358
PHA03308 PHA03308
transcriptional regulator ICP4; Provisional
 637-745 7.48e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 165563 [Multi-domain]  Cd Length: 1463  Bit Score: 40.56  E-value: 7.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  637 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-----PEPTTPKE-------PEPTT 704
Cdd:PHA03308  750 EPSAAQESPANPWPRAPPCDEQEPLSVSPYGPEPDRPPDDDFETRKGLKRKSSEDhadpiPEGNATKKtcglqglPDSLP 829

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 161086926  705 PKEPEPTTPKKPEPTTPKEPE-PTTPKEPEPTTPKEP-EPTTP 745
Cdd:PHA03308  830 PAVPETDRDNPLLPPCPITPEgPPCPPREEPQQPQEPqEPQSP 872
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 491-555 7.68e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.05  E-value: 7.68e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  491 EPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 555
Cdd:PTZ00144  123 APPAAAPAAAAaaKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
PHA03169 PHA03169
hypothetical protein; Provisional
 490-698 7.68e-03

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 40.34  E-value: 7.68e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  490 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 569
Cdd:PHA03169   44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAEELASGLSPENT 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  570 KEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 649
Cdd:PHA03169  124 SGSSPESPASHSPP---PSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTS 200

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 161086926  650 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 698
Cdd:PHA03169  201 SPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
717-772 7.82e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 7.82e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  717 EPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTRkEPEPTTPKEPEPTTPKEP 772
Cdd:COG5373    43 AASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAA 100
DUF6550 pfam20187
Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. ...
 552-639 7.86e-03

Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicutes. Proteins in this family are approximately 180 amino acids in length. There are two conserved sequence motifs at the C-terminal: FGW/I and I/VGxM.


Pssm-ID: 466338 [Multi-domain]  Cd Length: 190  Bit Score: 39.14  E-value: 7.86e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   552 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEpEPTTPKEPE--PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPE 629
Cdd:pfam20187   59 TDDKPGVSVQNITPDTSSNDPLDIAKSSGVEQTIQE-TPVKPAEPEkpDTAVDDHKPHVVPEEGRLTNPDTPPTYDKEPT 137

                           90
                   ....*....|
gi 161086926   630 PTTPKEPEPT 639
Cdd:pfam20187  138 EVKPKETEPK 147
PRK14960 PRK14960
DNA polymerase III subunit gamma/tau;
526-692 7.89e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237868 [Multi-domain]  Cd Length: 702  Bit Score: 40.42  E-value: 7.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  526 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT----PKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTP 601
Cdd:PRK14960  360 PLAPNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEP----EPEPEPE 435

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  602 KEPEPttlkEPEPT------TPKEPEPTTLKEP----------EPTTPKEPEPTTTKEPESTTRK-EPEPTTPKEPEPTT 664
Cdd:PRK14960  436 PEPEP----EPQPNqdlmvfDPNHHELIGLESAvvqetvsvleEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEPIGLF 511

                         170       180
                  ....*....|....*....|....*...
gi 161086926  665 PKEPEPTTPKEPEPTTPKEPEPTTPKEP 692
Cdd:PRK14960  512 EASSAEFSLAQDTSAYDLVSEPVIEQQS 539
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 465-531 7.95e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.05  E-value: 7.95e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161086926  465 PKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 531
Cdd:PTZ00144  124 PPAAAPAAAAAAKAEKTTPEKPKA-AAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 554-667 7.99e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 40.22  E-value: 7.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  554 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPEPTTP 633
Cdd:COG3266   256 KAPSQASSASAPATTSLGEQQEVSLPPAV----AAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKP 327

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 161086926  634 KEPEPTTTKEPE-STTRKEPEPTTPKEPEPTTPKE 667
Cdd:COG3266   328 VVTETAAPAAPApEAAAAAAAPAAPAVAKKLAADE 362
PBP1 COG5180
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ...
 452-763 8.06e-03

PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];


Pssm-ID: 444064 [Multi-domain]  Cd Length: 548  Bit Score: 40.43  E-value: 8.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  452 PEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPT 527
Cdd:COG5180   219 GGADHPRPEAASSPKVDPPSTSeaRSRPATVDAQPEMRPPADAKERRRAAIGDTPAAEPpgLPVLEAGSEPQSDAPEAET 298

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  528 TPKEPEPTTPKEPEPTTPKEPeptTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTLKEPEPTTPKEP-EPTTPKEP 604
Cdd:COG5180   299 ARPIDVKGVASAPPATRPVRP---PGGARDPGTPRPGQPTERpaGVPEAASDAGQPPSAYPPAEEAVPGKPlEQGAPRPG 375

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  605 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 684
Cdd:COG5180   376 SSGGDGAPFQPPNGAPQPGLGRRGAPGPPMGAGDLVQAALDGGGRETASLGGAAGG-AGQGPKADFVPGDAESVSGPAGL 454

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  685 E--PTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 762
Cdd:COG5180   455 AdqAGAAASTAMADFVAPVTDATPVDVADVLGVRPDAILGGNVAPASGLDAETRIIEAEGAPATEDFVAAELSELREAAE 534


                  .
gi 161086926  763 E 763
Cdd:COG5180   535 E 535
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 527-584 8.15e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 8.15e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926   527 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 584
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSV 139
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 684-759 8.20e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 40.37  E-value: 8.20e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161086926  684 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPT 759
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 556-631 8.23e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.05  E-value: 8.23e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  556 PEPTTPKEPEPTTPKePEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTLKEPEPT 631
Cdd:PTZ00144  122 GAPPAAAPAAAAAAK-AEKTTPEKPKA---AAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 543-603 8.30e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 8.30e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   543 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 603
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK10905 PRK10905
cell division protein DamX; Validated
 543-682 8.50e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 39.92  E-value: 8.50e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  543 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepTTLKEPEPTTPKEPEPTTPKEPepttlKEPEPTTPKEPEP 622
Cdd:PRK10905  106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKP 178

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926  623 TtlkepePTTPKEPEPTTTKEPESTtrkePEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 682
Cdd:PRK10905  179 V------AQTPKRTEPAAPVASTKA----PAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
467-570 8.58e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 40.11  E-value: 8.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  467 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEpEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKepePTTPKEPEPTTPK 546
Cdd:PRK13335   69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQT--TTESTTPK---TKVTTPPSTNTPQ 142

                          90       100
                  ....*....|....*....|....*
gi 161086926  547 EPEPTTPKEPE-PTTPKEPEPTTPK 570
Cdd:PRK13335  143 PMQSTKSDTPQsPTIKQAQTDMTPK 167
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 551-608 9.12e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 9.12e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 161086926   551 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 608
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSV 139
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 624-689 9.20e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.05  E-value: 9.20e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926  624 TLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTP 689
Cdd:PTZ00144  117 EIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASK-PTPPAAAKPPEPAPAAKPPPTP 181
PRK10905 PRK10905
cell division protein DamX; Validated
 637-746 9.52e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 39.54  E-value: 9.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  637 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEpttpkEPEPTTPKEPEPTTPKEPepttPK 714
Cdd:PRK10905  126 EPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIEPKKpqATAKTEP-----KPVAQTPKRTEPAAPVAS----TK 196

                          90       100       110
                  ....*....|....*....|....*....|...
gi 161086926  715 KPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 746
Cdd:PRK10905  197 APAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
SAV_2336_NTERM NF041121
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...
 700-774 9.57e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.


Pssm-ID: 469044 [Multi-domain]  Cd Length: 473  Bit Score: 39.99  E-value: 9.57e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 161086926  700 PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttRKEPEPTTPKEPEPTTPKEPEP 774
Cdd:NF041121   19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPG---SLAPPPPPPPGPAGAAPGAALP 90
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
642-700 9.74e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 9.74e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161086926  642 KEPESTTRKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 700
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
Pneumo_att_G pfam05539
Pneumovirinae attachment membrane glycoprotein G;
637-779 9.78e-03

Pneumovirinae attachment membrane glycoprotein G;


Pssm-ID: 114270 [Multi-domain]  Cd Length: 408  Bit Score: 40.03  E-value: 9.78e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926   637 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT---PKEPEPTTP 713
Cdd:pfam05539  167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161086926   714 KKPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKePEPTTPKK 779
Cdd:pfam05539  247 PQHPPSTTSQDQSTTGDGQE-HTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPT-PRPTATTQ 310
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 703-763 9.86e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 9.86e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161086926   703 TTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKE 763
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
PRK11633 PRK11633
cell division protein DedD; Provisional
 524-631 9.89e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 39.22  E-value: 9.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161086926  524 PEPTTPKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTPKE 603
Cdd:PRK11633   45 PKPGDRDEPDMMPAATQ--ALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKP----KPVEKPKPK 118

                          90       100
                  ....*....|....*....|....*...
gi 161086926  604 PEPTTLKEPEPTTPKEPEPTTLKEPEPT 631
Cdd:PRK11633  119 PKPQQKVEAPPAPKPEPKPVVEEKAAPT 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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