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Conserved domains on  [gi|225007542|ref|NP_075531|]
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solute carrier family 15 member 3 [Mus musculus]

Protein Classification

MFS transporter( domain architecture ID 999995)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26758938|26098515
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS super family cl28910
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
38-559 0e+00

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


The actual alignment was detected with superfamily member cd17348:

Pssm-ID: 475125 [Multi-domain]  Cd Length: 435  Bit Score: 597.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLNSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGL 117
Cdd:cd17348    7 VLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLGMLL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 LLTTitndgrrsfcgempelplepACPSSSCQGSWSSpycattlylvllllaLAASSVRSTLTSFGADQVMDLGRDATRR 197
Cdd:cd17348   87 FPAT--------------------AAPALYAGLLLVG---------------LGVGSVKANITPFGADQVKDRGPEATRR 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 198 FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFItkpptgsqvssmlklafqnccpcrr 277
Cdd:cd17348  132 FFNWFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI------------------------- 186
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 278 sssrdsesahllpdqrsnqpgpspqedmaNFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFRTNpnislL 357
Cdd:cd17348  187 -----------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQSLHLKIPNIFISN-----I 232
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 358 LRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEKERLQYIAANQ 437
Cdd:cd17348  233 AGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAGILESKRLEIVKHNT 312
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 438 TVPQLIGKDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFP 517
Cdd:cd17348  313 TIQQQIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIK 392
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|...
gi 225007542 518 G-GWMYCPKDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIAGR 559
Cdd:cd17348  393 EiGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
 
Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
38-559 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 597.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLNSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGL 117
Cdd:cd17348    7 VLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLGMLL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 LLTTitndgrrsfcgempelplepACPSSSCQGSWSSpycattlylvllllaLAASSVRSTLTSFGADQVMDLGRDATRR 197
Cdd:cd17348   87 FPAT--------------------AAPALYAGLLLVG---------------LGVGSVKANITPFGADQVKDRGPEATRR 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 198 FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFItkpptgsqvssmlklafqnccpcrr 277
Cdd:cd17348  132 FFNWFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI------------------------- 186
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 278 sssrdsesahllpdqrsnqpgpspqedmaNFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFRTNpnislL 357
Cdd:cd17348  187 -----------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQSLHLKIPNIFISN-----I 232
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 358 LRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEKERLQYIAANQ 437
Cdd:cd17348  233 AGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAGILESKRLEIVKHNT 312
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 438 TVPQLIGKDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFP 517
Cdd:cd17348  313 TIQQQIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIK 392
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|...
gi 225007542 518 G-GWMYCPKDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIAGR 559
Cdd:cd17348  393 EiGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
179-515 9.64e-63

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 211.41  E-value: 9.64e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  179 LTSFGADQVMDLGRDATRRFFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFITKPPTG 258
Cdd:pfam00854  53 VSSFGGDQFEETDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLPAVGMIIALLVFLLGSRMYKKKPPKG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  259 S---QVSSMLKLAFQNCCPCRRSSSRDSESAHLLP--------DQRSNQPGP-----SPQEDMANFQVLVKILPVMVTLV 322
Cdd:pfam00854 133 NvltKVFKVLPVAAWNKVKLNGSSAGIKKLHWLDWareldaliILGIVVPGIffniwCTKTKVEEVKRLLRVLPLFLPLI 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  323 PYWMVYFQMQSTYVLQGlhlhipnifrtnPNISLLLRSdssnYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP 402
Cdd:pfam00854 213 MFWALYDQMGTSWVLQA------------RTMNRKIGS----FEIPPAQFQAFNAILVLIFIPIFDRLVYPLGRKCTGGL 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  403 SSLQKMALGMFFGFTSIIVAGVLEKERLQYIAAnqtvpqligKDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYS 482
Cdd:pfam00854 277 TPLQKMAVGLFLASLAFAIAAIVQLKRNDTGPE---------FPIAQEVPISVLWLIPQYLLIGFGELFISIGGLEFFYK 347
                         330       340       350
                  ....*....|....*....|....*....|...
gi 225007542  483 EAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLS 515
Cdd:pfam00854 348 LAPKSMTSLITGLFLLTNALGNFLSGVIATLTA 380
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
40-562 4.26e-29

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 120.69  E-value: 4.26e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  40 LVQMLERAAFFGVTSNLVLYL-NSLNFNWDGQQASRATLL---FLGASYLLAPVGGWLADVYLGRFLTIS---------- 105
Cdd:COG3104   21 FTEMWERFSFYGMRAILVLYLtASLADGGLGLSEADAAAIygaYTALVYLTPLLGGWLADRLLGQRRAILlggilmalgh 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 106 ----LSLLLYLAASGLLLTTITNDGrrsfcgempelpLEPACpssscqgswsspycattlylvllllalaassvrSTLTS 181
Cdd:COG3104  101 fllaLPGGVTLFYLGLALIAVGNGL------------FKPNI---------------------------------SSLVG 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 182 --FGADqvmDLGRDATrrfFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFitkPPTGS 259
Cdd:COG3104  136 qlYDPG---DPRRDAG---FTIFYMGINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYL---GDIGL 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 260 QVSSMLKLAFQNCCPCRRSSSRDSESAHLLPDQRSNQPGP--------------SPQEDMANFQVLVKILPVMVTLVPYW 325
Cdd:COG3104  207 EPDNPLSKKERLIAVALGALLLVLVLAGLLSNANIANYLLyviaiiayfifilrSKKLTKEERKRLLAILILFLFSIVFW 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 326 MVYFQMQSTYVLQGLHlhipnifRTNPNISlllrsdssNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRcKLLPSSL 405
Cdd:COG3104  287 ALYEQAGTSLNLFADR-------NVDRSLF--------GFEIPPSWFQSLNPLFIIILAPVFAALWTKLGKR-GKEPSTP 350
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 406 QKMALGMFF---GFTSIIVAGvlekerlQYIAANQTVpqligkdlyyaaplSIWWQIPQYLLIGVSEIFASIPGLEFAYS 482
Cdd:COG3104  351 TKFALGLLLlglGFLVMALAA-------LLAGAGGKV--------------SPLWLVLAYLLLTIGELCLSPVGLSMITK 409
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 483 EAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFPGGWMycpkdfgninncqmdrYFFLLAGIEAVTAVLFLWIAGRYER 562
Cdd:COG3104  410 LAPARFAGQMMGLWFLATALGNLLAGLLAGLYAVPGYTA----------------YFLLLGGIALVAGVVLLLLSPKLRR 473
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
182-431 1.42e-09

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 60.93  E-value: 1.42e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  182 FGADQVMDLGRDATRRFFNWFYWSINLGAILSLL--------VVAFIEQNISFLwGYSIIVGLVGLAFFIFLFATPVFIT 253
Cdd:TIGR00926 109 FGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIitpilrgdVGCFGCQDCYPL-AFGVPAILMILALIVFMAGSKMYKK 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  254 KPPTGSQVSSMLKLAFQNCCPCRRSSSRDSESAHLLpdqrSNQPGpSPQEDMANFQVLVKILPVMVTLVPYWMVYFQMQS 333
Cdd:TIGR00926 188 KPPKGNIVSKVIKCIVTALRKRFSTRSEHWPLHWLD----YAKDK-HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGS 262
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  334 TYVLQglhlhipnifrtnpniSLLLRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMF 413
Cdd:TIGR00926 263 RWTLQ----------------ATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGL 326
                         250
                  ....*....|....*...
gi 225007542  414 FGFTSIIVAGVLEKERLQ 431
Cdd:TIGR00926 327 LAALSFFVAALVQLKVNP 344
tppB PRK09584
dipeptide/tripeptide permease DtpA;
453-568 4.77e-03

dipeptide/tripeptide permease DtpA;


Pssm-ID: 181969  Cd Length: 500  Bit Score: 39.74  E-value: 4.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 453 LSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFPggwmycpkdfGNINN 532
Cdd:PRK09584 380 VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVP----------DNVTD 449
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 225007542 533 CQMD-----RYFFLLAGIEAVTAVLFLWIAGRYERTRQDPA 568
Cdd:PRK09584 450 PLMSlevygRVFLQIGIATAVIAVLMLLTAPKLNRMTQDDS 490
 
Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
38-559 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 597.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLNSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGL 117
Cdd:cd17348    7 VLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLGMLL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 LLTTitndgrrsfcgempelplepACPSSSCQGSWSSpycattlylvllllaLAASSVRSTLTSFGADQVMDLGRDATRR 197
Cdd:cd17348   87 FPAT--------------------AAPALYAGLLLVG---------------LGVGSVKANITPFGADQVKDRGPEATRR 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 198 FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFItkpptgsqvssmlklafqnccpcrr 277
Cdd:cd17348  132 FFNWFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI------------------------- 186
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 278 sssrdsesahllpdqrsnqpgpspqedmaNFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFRTNpnislL 357
Cdd:cd17348  187 -----------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQSLHLKIPNIFISN-----I 232
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 358 LRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEKERLQYIAANQ 437
Cdd:cd17348  233 AGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAGILESKRLEIVKHNT 312
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 438 TVPQLIGKDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFP 517
Cdd:cd17348  313 TIQQQIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIK 392
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|...
gi 225007542 518 G-GWMYCPKDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIAGR 559
Cdd:cd17348  393 EiGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
MFS_POT cd06175
Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of ...
38-557 6.67e-86

Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of transporters; The Proton-coupled oligopeptide transporter (POT) family is present across all major kingdoms of life and is known by a variety of names. It is referred to as the Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) in plants, and in addition to POT, it is also known as the Peptide transporter (PepT/PTR) or Solute Carrier 15 (SLC15) family in animals. Members of this family are proton-driven symporters involved in nitrogen acquisition in the form of di- and tripeptides. Plant members transport other nitrogenous ligands including nitrate, the plant hormone auxin, and glucosinolate compounds that are important for seed defense. POT proteins exhibit substrate multispecificity, with one transporter able to recognize as many as 8,400 types of di/tripeptides and certain peptide-like drugs. The POT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340865 [Multi-domain]  Cd Length: 422  Bit Score: 273.16  E-value: 6.67e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLNSlNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGL 117
Cdd:cd06175    4 ILLIELCERFTFYGIGANLVPFLTG-ALGLGNAQAANVVLNFLGTSYVTPLFGGWIADTFLGRYRTILIGAAIYAVGVAI 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 LLTTITNDGRRSFCGEMPELPLEPACpssscqgswsspyCATTLYLVLLLLALAASSVRSTLTSFGADQVMDLGRDATRR 197
Cdd:cd06175   83 LTVSTIPPGLRPLRCNPSHCEQASGI-------------QLTGFYAALYLIALGTGGVKANVSPLGADQFDERGPSKTQS 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 198 FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYsiivglvGLAFFIFLFATPVFITKpptgsqvssmlklafqnccpcrr 277
Cdd:cd06175  150 FFNWFYFCINVGSLLAMLGTPYIQDNVGWAAAY-------GIPFVAILLALVVFEVK----------------------- 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 278 sssrdsesahllpdqrsnqpgpspqedmanfqVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFRTnpnisll 357
Cdd:cd06175  200 --------------------------------QLLRALPLFAFCILFWTVYAQMTTSYVLQALTLVRSTGLFT------- 240
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 358 lrsdssnyrIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEKERLQYIAANQ 437
Cdd:cd06175  241 ---------IPPASMQAFNPILLLLLIPVLDKVVYPLIRRYGVGLSPLTKIGLGFFFGSLSMFVAGFLELKRLNTAHAHG 311
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 438 TVpqligkdlYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFP 517
Cdd:cd06175  312 PV--------VTTSPLSFWWQIPQYLLLGIGEILVSITGLEFAYREAPKSMKGFIMGLLLLTSGFGSFFGSVLVTLVSKP 383
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|.
gi 225007542 518 -GGWMycpkDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIA 557
Cdd:cd06175  384 tDGAH----IADDLNKGVLTNFFFLLAVLAALNFLIFLLVS 420
MFS_NPF cd17351
Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant ...
38-557 2.14e-71

Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340909 [Multi-domain]  Cd Length: 445  Bit Score: 235.98  E-value: 2.14e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYL-NSLNFnwDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAasG 116
Cdd:cd17351    4 ILGNEFAERLAFYGIAVNLVTYLtKVMHL--SNAKAANTVTNFSGTSYLTPLLGAFLADAYLGRYWTIAIFSVIYLV--G 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 117 LLLTTITndgrrsfcGEMPelPLEPACPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQVMD---LGRD 193
Cdd:cd17351   80 LILLTLS--------ASVP--SLRPPPCNPDSPCEPASSTQLTVLYVGLYLIALGTGGIKPCVSAFGADQFDEtdpKEKK 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 194 ATRRFFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFitkpptgSQVSSMLKLafqncc 273
Cdd:cd17351  150 QKPSFFNWFYFSINLGSLLAVTLVVYIQDNVSWGWGFGIPAAAMALAVIVFVAGTPFY-------REVKCLLRL------ 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 274 pcrrsssrdsesahllpdqrsnqpgpspqedmanfqvlvkiLPVMVTLVPYWMVYFQMQSTYVLQGLHLHipnifrtnpn 353
Cdd:cd17351  217 -----------------------------------------LPIWATTILLSTVYAQMQTFFVQQGLTMD---------- 245
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 354 islllRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP---SSLQKMALGMFFGFTSIIVAGVLEKERL 430
Cdd:cd17351  246 -----RRLGGSFEIPAASLSVFSTLFVLLFIPLYDRVFVPFARRYTGNPrgiTPLQRIGIGLVLSILAMAVAALVEVKRL 320
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 431 QYIAANQTVPQLIGkdlyyAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGL 510
Cdd:cd17351  321 RVARAHGLLDSPTG-----VVPMSVFWLLPQYFLLGLAEVFTYIGQLEFFYDEAPDGMRSLGTALFLLTIALGNFLSSAL 395
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*...
gi 225007542 511 VALL-SFPGGWMYCPKDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIA 557
Cdd:cd17351  396 VTIVnKITGKGGGPGWLPNNLNKGRLDYFYWLLAVLSAVNFLVFLVCA 443
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
179-515 9.64e-63

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 211.41  E-value: 9.64e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  179 LTSFGADQVMDLGRDATRRFFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFITKPPTG 258
Cdd:pfam00854  53 VSSFGGDQFEETDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLPAVGMIIALLVFLLGSRMYKKKPPKG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  259 S---QVSSMLKLAFQNCCPCRRSSSRDSESAHLLP--------DQRSNQPGP-----SPQEDMANFQVLVKILPVMVTLV 322
Cdd:pfam00854 133 NvltKVFKVLPVAAWNKVKLNGSSAGIKKLHWLDWareldaliILGIVVPGIffniwCTKTKVEEVKRLLRVLPLFLPLI 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  323 PYWMVYFQMQSTYVLQGlhlhipnifrtnPNISLLLRSdssnYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP 402
Cdd:pfam00854 213 MFWALYDQMGTSWVLQA------------RTMNRKIGS----FEIPPAQFQAFNAILVLIFIPIFDRLVYPLGRKCTGGL 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  403 SSLQKMALGMFFGFTSIIVAGVLEKERLQYIAAnqtvpqligKDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYS 482
Cdd:pfam00854 277 TPLQKMAVGLFLASLAFAIAAIVQLKRNDTGPE---------FPIAQEVPISVLWLIPQYLLIGFGELFISIGGLEFFYK 347
                         330       340       350
                  ....*....|....*....|....*....|...
gi 225007542  483 EAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLS 515
Cdd:pfam00854 348 LAPKSMTSLITGLFLLTNALGNFLSGVIATLTA 380
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
38-560 2.40e-57

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 199.03  E-value: 2.40e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLNSLnFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGL 117
Cdd:cd17417    7 IIGIEVAERFAYYGIASNLVTYLTTP-LHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYLLGLVL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 LLTTITNDGRRSfcgemPELPLEPACPSSSCQGSWsspYCATTLYLVLLLLAlaassvRSTLTSFGADQV-MDLGRDATR 196
Cdd:cd17417   86 LTLSASLPSLKP-----PECNGTCSKASTLQVAFF---FFSLYLVAIGQGGH------KPCVQAFGADQFdEDDPKEKKQ 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 197 R--FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFITKpptgsqvssmlklafqnccp 274
Cdd:cd17417  152 KssFFNWWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGTPLYRYK-------------------- 211
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 275 crrsssrdsesahllpdqrsnqpgpspqedMANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGlhlhipnifrtnpni 354
Cdd:cd17417  212 ------------------------------VEEVKLVLRLIPIWFTTLVFTVVFAQSPTFFTKQG--------------- 246
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 355 SLLLRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP---SSLQKMALGMFFGFTSIIVAGVLEKERLQ 431
Cdd:cd17417  247 VTMDRTIGPNFKIPPASLQSFITLSILISIPIYDRVFVPIARKITGNPrgiTLLQRIGIGMFLSILAMVIAALVEMKRLK 326
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 432 YIAANQTVPQLIgkdlyyAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGaiMGIFFCLS--GVGSLLGSG 509
Cdd:cd17417  327 VAKEHGLISPKA------TVPMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRS--LGTALYLSvfGVGSFLSSF 398
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|..
gi 225007542 510 LVALLS-FPGGWMYCPKDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIAGRY 560
Cdd:cd17417  399 LISIVDkITSSSGGQSWFNNNLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSY 450
MFS_NPF6 cd17413
NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The ...
38-557 5.98e-50

NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter 1/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF6 includes the first identified member of the NRT1/PTR family: Arabidopsis thaliana NRT1.1, now called AtNPF6.3. It is a dual affinity nitrate influx transporter and a nitrate sensor. It also transports auxin and has nitrate efflux activity. NPF6 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340971 [Multi-domain]  Cd Length: 457  Bit Score: 179.19  E-value: 5.98e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLNSlNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGL 117
Cdd:cd17413    7 ILGIEMCERLTTLGIGVNLVTYLTG-TMHLPSATSANIVTNFLGTSFLLCLLGGFIADTFLGRYLTIAIFASIQALGVLV 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 L-LTTITNDGRRSFCGEMPELPLEPAcpssscqgswsSPYCATTLYLVLLLLALAASSVRSTLTSFGADQvMDLGRDATR 196
Cdd:cd17413   86 LtLSTTLPSLRPPPCNHTTSHHCEPA-----------SGIQLTVLYLALYLIALGTGGIKSSVSGFGSDQ-FDENDPKER 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 197 R----FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFITKPPTGSQvssmlklafqnc 272
Cdd:cd17413  154 KlmsyFFNRFFFCISVGSLLAVTVLVYIQDNVGRGWGYGICAAAMVLAIVVFLAGTKRYRFKKSIGST------------ 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 273 cpcrrsssrdsesahllpdqrsnqpgpspqeDMANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHlhipnifrtnp 352
Cdd:cd17413  222 -------------------------------QVEEVKMVVRMLPIWATTILFWTVYAQMTTFSVEQAET----------- 259
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 353 nisllLRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP---SSLQKMALGMFFGFTSIIVAGVLEKER 429
Cdd:cd17413  260 -----MDRNIGSFEIPPASMAVFLVATILLTTAVYDRVIVPLCRKLTGHPqglTTLQRIGVGLVFSCLAMAVAALVELKR 334
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 430 LQyIAANQTVPQLIgkdlyyaAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSG 509
Cdd:cd17413  335 LR-IAHAHGKPVKT-------VPMSVFWLVPQYFLVGAGEAFIYTGQLDFFIRESPKGMKSMSTGLFLSTLSLGFFVSSF 406
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 225007542 510 LVALL------SFPGGWMYcpkdfGNINNCQMDRYFFLLAGIEAVTAVLFLWIA 557
Cdd:cd17413  407 LVSIVnrvtgkSHPHGWLA-----DNLNKGRLDYFYWLLAVLSALNFVIFLVFA 455
MFS_NPF8 cd17418
NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The ...
45-560 6.88e-49

NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF8 contains the Arabidopsis dipeptide transporters AtNPF8.1 (PTR1), AtNPF8.2 (PTR5), and AtNPF8.3 (PTR2), as well as tonoplast-localized transporters AtNPF8.4 (PTR4) and AtNPF8.5 (PTR6). Oryza sativa NRT1 (now called OsNPF8.9) is a low-affinity nitrate transporter. NPF8 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340976 [Multi-domain]  Cd Length: 447  Bit Score: 175.74  E-value: 6.88e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  45 ERAAFFGVTSNLVLYLNSlNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAasGLLLTTITn 124
Cdd:cd17418   14 ERLAYYGIATNLITYLTK-ELHQGNVSAANNVTNWSGTCYITPLIGAFIADAYWGRYWTIASFSAIYFI--GMVLLTLS- 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 125 dgrrsfcGEMPELPlEPACPSSSCQGSWSSPYcaTTLYLVLLLLALAASSVRSTLTSFGADQVMDLGRDATRR---FFNW 201
Cdd:cd17418   90 -------ASVPGLK-PASCIGSLCPPATSVQY--AVFFLGLYLIALGTGGIKPCVSSFGADQFDDTDPKEKVRkssFFNW 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 202 FYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFitkpptgsqvssmlklafqnccpcrrsssr 281
Cdd:cd17418  160 FYFSINIGALISSSVLVWIQENVGWGWGFGIPTVFMGIAIVSFFFGTPLY------------------------------ 209
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 282 dsesahllpdqrsnqpgpspqedmANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLhlhipnifrtnpnislLLRSD 361
Cdd:cd17418  210 ------------------------REVKILIRLLPIWASGIVFATVYSQMSTMFVQQGR----------------TMDRM 249
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 362 SSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP---SSLQKMALGMFFGFTSIIVAGVLEKERLQYIAANQT 438
Cdd:cd17418  250 GGNFEIPPASLSLFDTLSVLIWVPIYDRFIVPLVRKFTGHErgfTQLQRMGIGLFISVLSMVAAAIVEIVRLQLARTHNL 329
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 439 VPQLigkdlyYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSF-- 516
Cdd:cd17418  330 VESG------PPVPMSIFWQIPQYFLIGAAEVFTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSLIVTLVTYvt 403
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*
gi 225007542 517 -PGGWMYCPKDfgNINNCQMDRYFFLLAGIEAVTAVLFLWIAGRY 560
Cdd:cd17418  404 tKGGKPGWIPD--NLNNGHLDYFFWLLASLSFLNILVYLWIAKRY 446
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
38-557 4.39e-48

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 173.71  E-value: 4.39e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLNSLnFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTisLSLLLYLAASGL 117
Cdd:cd17419    7 ILVNQGLATLAYFGVGVNLVLYLTRV-MHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWT--STLFQAIFVIGL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 LLTTITNdgrrsfcgEMPELPlEPACPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQVMDLGRDATRR 197
Cdd:cd17419   84 LLLTLSS--------ALPSLR-PPQCGDGDLKCPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEDPIEKAS 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 198 ---FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFitkpptgSQVSSMLKLafqnccp 274
Cdd:cd17419  155 ksaFFSYFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFY-------REVKCILRL------- 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 275 crrsssrdsesahllpdqrsnqpgpspqedmanfqvlvkiLPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNifrtnpni 354
Cdd:cd17419  221 ----------------------------------------LPIWLSTIIYSVVYTQMATLFVEQGAAMDTSF-------- 252
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 355 slllrsdsSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP---SSLQKMALGMFFGFTSIIVAGVLEKERLQ 431
Cdd:cd17419  253 --------GNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRKVTGHPkgiTELQRMGIGLVIGILAMVVAALVEIQRLK 324
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 432 YIAANQTvpqligKDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGaiMGIFFCLSGV--GSLLGSG 509
Cdd:cd17419  325 VARPSNL------DDPTSPSPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRS--LGSALCMASValGNYLSSL 396
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|.
gi 225007542 510 LVALL---SFPGGWMYCPKDfgNINNCQMDRYFFLLAGIEAVTAVLFLWIA 557
Cdd:cd17419  397 LVTIVnkvTTKDGSPGWIPD--NLNKGHLDRFYWLLAALSGIDFVVFLICA 445
MFS_NPF1_2 cd17416
NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; ...
42-560 5.54e-45

NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF1 includes Medicago truncatula LATD/NIP, now named MtNPF1.7, which is a high-affinity nitrate transporter and is involved in nodulation and root architecture. NPF2 members are well-established nitrate and glucosinolate transporters, including Arabidopsis nitrate influx and efflux transporters with varied tissue and developmental specificity. Examples are AtNPF2.7, which is expressed in the cortex of mature roots, and AtNPF2.9, which is expressed in root companion cells where it is involved in phloem loading. NPF1/2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340974 [Multi-domain]  Cd Length: 444  Bit Score: 165.13  E-value: 5.54e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  42 QMLERAAFFGVTSNLVLYLNSlNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGLL-LT 120
Cdd:cd17416    8 ETGEKLASYGLLANLIVYLIE-EYNMKSIAAANIINIWSGTTNFLPVVGAFLSDSYFGRFPTISVGSFASLLGMVLLtLT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 121 TItndgrrsfcgeMPEL-PlePACPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQVMD---LGRDATR 196
Cdd:cd17416   87 AA-----------IPSLrP--PPCETASSLCQSPSKLQLAVLYSALALLSIGAGGIRPCSLAFGADQFDKkteSGKRGLE 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 197 RFFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFITKpptgsqvssmlklafqnccpcr 276
Cdd:cd17416  154 SFFNWYYFTFTVAQIISLTAIVYIQDNVSWKIGFGIPAALMLLSFILFLAGSRLYVVE---------------------- 211
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 277 rsssrdsesahllpdqrsnqpgpspqedmaNFQVLVKILPVMVTLVpYWMVYFQMQSTY-VLQGLHLHipnifrtnpnis 355
Cdd:cd17416  212 ------------------------------DLKSLIRVIPIWSTGI-ILSLAMAQQMSLtVLQALVMD------------ 248
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 356 lllRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLP---SSLQKMALGMFFGFTSIIVAGVLEKERLQy 432
Cdd:cd17416  249 ---RHLGPSFQIPAGSITVFLLITLTIFIPLYDRVLVPLLRKITGRGrglTLLQRVGIGIVFSILSMAVAAIVERKRRK- 324
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 433 IAANQTVPqligkdlyyAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVA 512
Cdd:cd17416  325 TALTQGNG---------TSPMSVLWLVPQLVLMGIAEAFHFIGQIEFFYQEFPESMRSTATSLFSLGMGVASYLSSALIS 395
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 225007542 513 LL------SFPGGWMycPKDfgnINNCQMDRYFFLLAGIEAVTAVLFLWIAGRY 560
Cdd:cd17416  396 AVhrttgrGGGGSWL--PDD---INKGRLDYVYWLLAGLGALNLGYFLVCSWRY 444
MFS_SLC15A1_2_like cd17347
Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily ...
45-560 2.30e-44

Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters; Solute carrier family 15 member 1 (SLC15A1) and SLC15A2 are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1, or peptide transporter 1 (PepT1), is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. SLC15A2, or peptide transporter 2 (PepT2), is abundantly expressed in the apical membrane of kidney proximal tubules and is also referred to as the renal isoform. Both proteins transport di/tripeptides, but not tetrapeptides or free amino acids, using the energy generated by an inwardly directed transmembrane proton gradient. The SLC15A1/SLC15A2-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340905 [Multi-domain]  Cd Length: 427  Bit Score: 163.17  E-value: 2.30e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  45 ERAAFFGVTSNLVLYL-NSLNFNWDgqQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGLL-LTTI 122
Cdd:cd17347   14 ERFSYYGMRAILVLYLtDFLGFSEA--EATAIYHSFVMLCYFFPLLGAIIADSYLGKYRTILYLSLVYCLGHIVLaVTAI 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 123 TNDGRRSFCGEMPELPLepacpssscqgswsspycattlylvlllLALAASSVRSTLTSFGADQVMDLGRDATRRFFNWF 202
Cdd:cd17347   92 PPLGPPHVWGLLIGLLL----------------------------IAIGTGGIKPCVSAFGGDQFGADQQHLLARFFSWF 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 203 YWSINLGAILSLLVVAFIEQNISFLW--GYSIIVGLVGLAFFIflfATPVFITKPPTGSQVSSMLKlafqnccpcrrsss 280
Cdd:cd17347  144 YFAINAGSLLSTFLTPILRADVQFGGhdCYPLAFGVPGVLMAV---ATLVFWLGRKHYKDVKALLR-------------- 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 281 rdsesahllpdqrsnqpgpspqedmanfqVLVKILPVMVtlvpYWMVYFQMQSTYVLQGLHLhipnifrtNPNISLllrs 360
Cdd:cd17347  207 -----------------------------VLVLFIPLPV----FWALFDQQGSRWTLQAEQM--------DGLVGG---- 241
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 361 dssnYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEkERLQYIAANQTVP 440
Cdd:cd17347  242 ----FTILPDQMQALNPILILILIPLFDYVIYPLLERCGIPLTPLRKMGVGMILAALAFVIAGFLQ-LRIDGGLPGQPDP 316
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 441 QLIGKDLYY-AAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFPGG 519
Cdd:cd17347  317 GEVTTFEDIePNSVSILWQLPQYVVLTAGEVLFSITGLEFAYTQAPKSMKSVVQAAWLLTVALGNLIVVIVAELIQFSSQ 396
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|.
gi 225007542 520 WMycpkdfgninncqmdrYFFLLAGIEAVTAVLFLWIAGRY 560
Cdd:cd17347  397 AA----------------EYFFFAGLMLVVAVVFALLARFY 421
MFS_NPF4 cd17414
NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The ...
38-559 1.52e-36

NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. Members of the NPF4 subfamily have been shown to transport ABA. NPF4 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340972 [Multi-domain]  Cd Length: 456  Bit Score: 141.78  E-value: 1.52e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYL-NSLNFNwdgqQASRATLL--FLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAa 114
Cdd:cd17414    7 VLVVEALENMAYLANANNLVTYLiNNMHYS----LAKSANIVtnFVGTAFLLALLGGFLSDSFLSSFKTIIIFGSIELL- 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 115 sGLLLTTITndgrrsfcGEMPELPLEPACPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQVMD---LG 191
Cdd:cd17414   82 -GLILLTVQ--------AHIPSLQPPSCNSLGDLTCKEPSGSQAAILFVGLYLVALGVGCIKPNLPSHGADQFDEndpKG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 192 RDATRRFFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFITKpptgSQVssmlklafqn 271
Cdd:cd17414  153 RRQLSSFFNWYYFSFSLGALIAVTLVVWVEENKGWDWGFGVSAAVIAVGILVFVAGTPFYRNK----TQV---------- 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 272 ccpcrrsssrdsesahllpdqrsnqpgpspqEDManfQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGlhlhipnifrtn 351
Cdd:cd17414  219 -------------------------------EEV---KIVLKMLPIFACTIILNCILAQLQTFSVQQG------------ 252
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 352 pniSLLLRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSS---LQKMALGMFFGFTSIIVAGVLEKE 428
Cdd:cd17414  253 ---STMNRTKIGSFNIPPASLQAIPVIFMLILVPLYDHLLVPFARKITGHESGithLQRIGIGLVLSTLSMVVAALVETK 329
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 429 RLQYIAANQTVpqligkDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGS 508
Cdd:cd17414  330 RKKVAVENGLL------NSKENLPISIFWIALQFLILGISDMFTAVGLLEFFYTESPSSMRSLGTALTWCSYSFGFYLSS 403
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 225007542 509 GLVALLSF------PGGWMycpkDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIAGR 559
Cdd:cd17414  404 VLVSVVNKvtgsggHGGWL----LGENLNRDRLDLFYWLLCVLSTINFLNYLFWARR 456
MFS_NPF3 cd17415
NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The ...
42-557 1.25e-31

NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF3 is the smallest NPF subfamily and it includes Cucumis sativus nitrite transporter (CsNitr1), now named CsNPF3.2. It functions as a chloroplast nitrite uptake transporter to remove toxic nitrite from the cytosol. NPF3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340973 [Multi-domain]  Cd Length: 448  Bit Score: 127.56  E-value: 1.25e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  42 QMLERAAFFGVTSNLVLYLnSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAasGLLLTT 121
Cdd:cd17415   11 EICERLASVGFHTNLITYL-TLQLHMPLVKAANILTNFNGTASLTPLLGAFIADSFAGRFWTITIGSIIYQL--GMVLLT 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 122 ITndgrrsfcGEMPELPlEPACPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQV-MDLGRDATRR--F 198
Cdd:cd17415   88 IS--------AILPSLR-PPPCNGHEVCACQASSAQLSILYLSLLLTALGSGGIRPCVVAFGADQFdESDPKQAKQTwnF 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 199 FNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFItkpptgsqvssmlklafqnccpcrrs 278
Cdd:cd17415  159 FNWYYFCMGIAILLAVTVIVYIQDNVGWGWGFGIPTIAMAISVIAFVVGSPLYR-------------------------- 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 279 ssrdsesahllpdqrsnqpgpspqedmaNFQVLVKILPVMVTLVPYWMVYFQmQSTYVLQGLhlhipnifRTnpnislLL 358
Cdd:cd17415  213 ----------------------------ELKSIIRMLPIWAAGILLVTASSQ-QHTFSIQQA--------RT------MN 249
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 359 RSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSS---LQKMALGMFFGFTSIIVAGVLEKERlQYIAA 435
Cdd:cd17415  250 RHLTPSFQIPPASMSVFGILSLLTTVPLYDRVLMPVARKFTGNERGitfLQRMGIGLFISILATVVAAFVEVKR-KSVAA 328
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 436 NQTV---PQLIgkdlyyaAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVA 512
Cdd:cd17415  329 NHGLldrPHAT-------VPISVFWLVPQYILHGIAEAFMSIGHLEFFYDQSPESMRSTATALFWSTISLGSYLSTLLVT 401
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*
gi 225007542 513 LLSFPGGWMYCPKDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIA 557
Cdd:cd17415  402 LVHKETSRGGRWWLPNNLNRGRLDYFYWLVAVLQAVNLVYFLICA 446
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
40-562 4.26e-29

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 120.69  E-value: 4.26e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  40 LVQMLERAAFFGVTSNLVLYL-NSLNFNWDGQQASRATLL---FLGASYLLAPVGGWLADVYLGRFLTIS---------- 105
Cdd:COG3104   21 FTEMWERFSFYGMRAILVLYLtASLADGGLGLSEADAAAIygaYTALVYLTPLLGGWLADRLLGQRRAILlggilmalgh 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 106 ----LSLLLYLAASGLLLTTITNDGrrsfcgempelpLEPACpssscqgswsspycattlylvllllalaassvrSTLTS 181
Cdd:COG3104  101 fllaLPGGVTLFYLGLALIAVGNGL------------FKPNI---------------------------------SSLVG 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 182 --FGADqvmDLGRDATrrfFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFitkPPTGS 259
Cdd:COG3104  136 qlYDPG---DPRRDAG---FTIFYMGINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYL---GDIGL 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 260 QVSSMLKLAFQNCCPCRRSSSRDSESAHLLPDQRSNQPGP--------------SPQEDMANFQVLVKILPVMVTLVPYW 325
Cdd:COG3104  207 EPDNPLSKKERLIAVALGALLLVLVLAGLLSNANIANYLLyviaiiayfifilrSKKLTKEERKRLLAILILFLFSIVFW 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 326 MVYFQMQSTYVLQGLHlhipnifRTNPNISlllrsdssNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRcKLLPSSL 405
Cdd:COG3104  287 ALYEQAGTSLNLFADR-------NVDRSLF--------GFEIPPSWFQSLNPLFIIILAPVFAALWTKLGKR-GKEPSTP 350
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 406 QKMALGMFF---GFTSIIVAGvlekerlQYIAANQTVpqligkdlyyaaplSIWWQIPQYLLIGVSEIFASIPGLEFAYS 482
Cdd:COG3104  351 TKFALGLLLlglGFLVMALAA-------LLAGAGGKV--------------SPLWLVLAYLLLTIGELCLSPVGLSMITK 409
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 483 EAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFPGGWMycpkdfgninncqmdrYFFLLAGIEAVTAVLFLWIAGRYER 562
Cdd:COG3104  410 LAPARFAGQMMGLWFLATALGNLLAGLLAGLYAVPGYTA----------------YFLLLGGIALVAGVVLLLLSPKLRR 473
MFS_PTR2 cd17350
Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide ...
195-522 2.87e-23

Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide transporter or permease PTR2 is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. It is a 12-transmembrane domain (TMD) integral membrane protein that translocates di-/tripeptides. As with other POT family proteins, it displays characteristic substrate multispecificity. PTR2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340908 [Multi-domain]  Cd Length: 438  Bit Score: 102.55  E-value: 2.87e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 195 TRRFFNWFYWSINLGAiLSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFITKPptgSQVSSMLKLAFQNCcp 274
Cdd:cd17350  162 LSRIYMIFYWAINVGS-LSLLATTYLERTKGFWYAYLLPLCVFVIPLIILAFGKKFYKIRP---DLFIDELKRALRAC-- 235
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 275 crrsssrdsesahllpdqrsnqpgpspqedmanfqvlvkilPVMVTLVPYWMVYFQMQSTYVLQG--LHLH-IPNIFRTN 351
Cdd:cd17350  236 -----------------------------------------KVFLFYPIYWVCYGQMTSNFISQAgqMQLHgVPNDLFQA 274
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 352 pnislllrsdssnyripeawlllANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEKERLQ 431
Cdd:cd17350  275 -----------------------FDSIALIIFIPILENIIYPLLRKYNIPFKPITRITLGFMFASFSMIYAAVLQAKIYQ 331
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 432 -----YIAANQTVPqligkdlyyaAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLL 506
Cdd:cd17350  332 agpcyANPTGTCSP----------NDIHVWIQIPAYVLIAFSEIFASITGLEYAYTKAPPSMKSFITALFLLTNAFGAAL 401
                        330
                 ....*....|....*..
gi 225007542 507 GSGLVALLSFPG-GWMY 522
Cdd:cd17350  402 SIAISPAAVDPKlTWMF 418
MFS_SLC15A1 cd17412
Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute ...
45-506 3.50e-17

Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 1 (SLC15A1), also called peptide transporter 1 (PepT1), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A1, as well as SLC15A2, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1 is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. It is a high-capacity/low-affinity transporter that drives the transport of di-and tripeptides for metabolic purposes. It's expression is upregulated in the colon during chronic inflammation associated with inflammatory bowel disease. SLC15A1/PepT1 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340970 [Multi-domain]  Cd Length: 415  Bit Score: 84.12  E-value: 3.50e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  45 ERAAFFGVTSNLVLYLNSLnFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGLLLTTITN 124
Cdd:cd17412   14 ERFSYYGMRAVLVLYFKYF-LRWDDDLSTAIYHTFVALCYLTPILGAIIADSWLGKFKTIVYLSIVYTIGQAVMAVSAIH 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 125 DGRRSFCGEMPE-LPLEPAcpssscqgswsspycatTLYLVLLLLALAASSVRSTLTSFGADQVMDLGRDATRRFFNWFY 203
Cdd:cd17412   93 DLTDANRDGTPDnLTLHVA-----------------LSMIGLLLIALGTGGIKPCVAAFGGDQFEEHQEKQRSRFFSIFY 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 204 WSINLGAILSLLVVAFIE--------QNISFLWGYSIIVGLVGLAFFIFLFATPVFItkpptgsqvssmlklafqnccpc 275
Cdd:cd17412  156 LSINAGSLLSTIITPILRsqecgihsKQKCYPLAFGVPAALMVVALIVFILGSKMYK----------------------- 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 276 rrsssrdsesahllpdqrsnqpgpspqedmaNFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQglhlhipnifrtnpniS 355
Cdd:cd17412  213 -------------------------------QIKMVLKVLFLYIPLPMFWALFDQQGSRWTLQ----------------A 245
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 356 LLLRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEkerlqyiaa 435
Cdd:cd17412  246 TTMDGNFGAIQIQPDQMQTVNPILIIIMVPIFDAVIYPLIKKCKINFTPLRKMTVGMFLAALAFVAAALLQ--------- 316
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 225007542 436 nqtvpqligkdlyyaapLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLL 506
Cdd:cd17412  317 -----------------IQMAWQIPQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNII 370
MFS_SLC15A5 cd17349
Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute ...
38-559 2.16e-16

Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 5 (SLC15A5) is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. The specific function of SLC15A5 is unknown. SLC15A5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340907 [Multi-domain]  Cd Length: 437  Bit Score: 81.72  E-value: 2.16e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  38 VLLVQMLERAAFFGVTSNLVLYLnSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGL 117
Cdd:cd17349    7 LLLVELCERFTFFGIVCNMILFC-TIKLGYRNHQAAIVNLCFVGTSTLTPVFVGWLAEECMGRNKLVYICLFLHFLGTAL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 118 LLTTitndgrrSFCGEMPELPLEPACPSSSCQGSWSSPYcattlyLVLLLLALAASSVRSTLTSFGADQVMDLGRDATRR 197
Cdd:cd17349   86 LPVV-------AFPFEDFYIDTHHIIHTLAKREQTLLFY------VALLTASLGTGGIRAIVCPLSAYGLQDYGSRKLMS 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 198 FFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIivglvglaffiflfatpvfitkpPTGSQVSSMLKLafqnccpcrr 277
Cdd:cd17349  153 FFNWFYWLVNLNSAVVFVGISYIQQSVAKNLGFLI-----------------------PFMSVLMALITL---------- 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 278 sssrdsesaHLLpdqrsnqpgpspQEDMANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHlhipnifrTNPNISLL 357
Cdd:cd17349  200 ---------HMV------------RNDLINTKNLVRLFPLFAFQILYRTCIMQIPSGYYLQTMN--------SNLNLGGF 250
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 358 LrsdssnyrIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAGVLEKERLQYIAANQ 437
Cdd:cd17349  251 L--------LPIAAMNVISIIPLLILAPFLEYFSSCLFSSKRYGPFLSACIIAGHLCAALSVMVAGFSEIHRKRFPLVEQ 322
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 438 TvpqLIGKDLYYAApLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFP 517
Cdd:cd17349  323 T---LSGKVLLVSS-MPCFQLAPQYVLLGVAEALVTPACSLITFRLVPSSIRGISMHFLTLFNGAGCFMGALLIQLVYLI 398
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 225007542 518 GGWMYCPKdfgNINNCQMDRYFFLLAGIEAVTAVLFLWIAGR 559
Cdd:cd17349  399 SEGNWFPN---TLNKGNLERFFFFLASLMLLNALGFWRISHR 437
MFS_DtpA_like cd17346
Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily ...
40-559 2.39e-15

Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters; The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340904 [Multi-domain]  Cd Length: 399  Bit Score: 78.00  E-value: 2.39e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  40 LVQMLERAAFFGVTSNLVLYL-NSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAasGLL 118
Cdd:cd17346    9 FTEMWERFSYYGMRAILILYLtAQLGDGFSEADAASIYGAYTALVYLTPIIGGWLADKVLGARRTVFIGGILMAL--GYL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 119 LTTITNDGRRSFCGEMPELP----LEPACPssscqgswsspycattlylvllllalaassvrSTLTSFGADQvMDLGRDA 194
Cdd:cd17346   87 LLALSPFSVSMLYLGLALIIvgngLFKPNI--------------------------------SSLVGKLYDE-NDPRRDS 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 195 TrrfFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPvfitkpptgsqvssmlklafqnccp 274
Cdd:cd17346  134 G---FSIFYMGINLGAFLAPLLCGTLGDNYGYHYGFGLAAVGMLLGLLIFLLGRK------------------------- 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 275 crrsssrdsesaHLLPDQRsnqpgpspqedmanfqvLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFrtnpni 354
Cdd:cd17346  186 ------------KLLERKK-----------------MLAIIILFLFAVVFWAIYEQAGTSLALFADENVDRLLG------ 230
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 355 slllrsdssNYRIPEAWLLLANVAVILILIPVKDhLIDPLLLRCKLLPSSLQKMALGMFFGFTSIIVAgvlekerlqYIA 434
Cdd:cd17346  231 ---------GFTIPPSWFQSLNPLFIILLAPILA-ALWTKLGKRGKDPSIPTKFALGLLLLGLSFLLM---------VLA 291
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 435 ANQTVPqligkdlyyAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALL 514
Cdd:cd17346  292 ASFAGG---------SGKVSALWLVLSYFLQTLGELCLSPVGLSMITKLAPAKFAGFMMGLWFLASALGNILAGYLAGFY 362
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*
gi 225007542 515 SFPGGWMYCPKDFGninncqmdRYFFLLAGIEAVTAVLFLWIAGR 559
Cdd:cd17346  363 AQPKDPLASALVYT--------DYFGLIGVIALVAGIILLLLAKK 399
MFS_SLC15A2 cd17411
Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute ...
179-506 1.45e-13

Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 2 (SLC15A2), also called peptide transporter 2 (PepT2), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A2, as well as SLC15A1, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A2 is a high-affinity transporter and is abundantly expressed in the apical membrane of kidney proximal tubules and choroid plexus epithelial cells. It is the major transporter involved in the reclamation of peptide-bound amino acids and peptide-like drugs in the kidney, and is also called the renal isoform. In choroid plexus and the brain, it acts as an efflux transporter and plays a role in regulating peptide/neuropeptide homeostasis. SLC15A2/PepT2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340969 [Multi-domain]  Cd Length: 403  Bit Score: 72.55  E-value: 1.45e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 179 LTSFGADQVMDLGRDATRRFFNWFYWSINLGAILSLLVVAFIEQNISFLWG--YSIIVGLVGLAFFIFLFatpVFITKPP 256
Cdd:cd17411  122 VAAFGGDQFEEEHARERSKFFSIFYLSINAGSLISTFVTPILRGDVQCFGGdcYALAFGVPAALMVVALV---VFIAGSG 198
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 257 TGSQVssmlklafqnccpcrrsssrdsesahllpdqrsnqpgpspqedmanfQVLVKILPVMVTLVPYWMVYFQMQSTYV 336
Cdd:cd17411  199 MYKEV-----------------------------------------------KMVTRVLFLYIPLPMFWALFDQQGSRWT 231
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 337 LQGLHLHipnifrtnpnislllrSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMFFGF 416
Cdd:cd17411  232 LQATRMN----------------DFGGGFVLQPDQMQTLNPLLILVFIPIFDLGIYPLVSKCKINFTSLRKMATGMILAA 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 417 TSIIVAGVLEkerlqyiaanqtvpqligkdlyyaapLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIF 496
Cdd:cd17411  296 LAFAVAAAVE--------------------------IKIAWQLPQYVLLSAGEVMFSITGLEFSYSQAPASMKSVLQAGW 349
                        330
                 ....*....|
gi 225007542 497 FCLSGVGSLL 506
Cdd:cd17411  350 LLTVAFGNVI 359
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
182-431 1.42e-09

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 60.93  E-value: 1.42e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  182 FGADQVMDLGRDATRRFFNWFYWSINLGAILSLL--------VVAFIEQNISFLwGYSIIVGLVGLAFFIFLFATPVFIT 253
Cdd:TIGR00926 109 FGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIitpilrgdVGCFGCQDCYPL-AFGVPAILMILALIVFMAGSKMYKK 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  254 KPPTGSQVSSMLKLAFQNCCPCRRSSSRDSESAHLLpdqrSNQPGpSPQEDMANFQVLVKILPVMVTLVPYWMVYFQMQS 333
Cdd:TIGR00926 188 KPPKGNIVSKVIKCIVTALRKRFSTRSEHWPLHWLD----YAKDK-HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGS 262
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  334 TYVLQglhlhipnifrtnpniSLLLRSDSSNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLLPSSLQKMALGMF 413
Cdd:TIGR00926 263 RWTLQ----------------ATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGL 326
                         250
                  ....*....|....*...
gi 225007542  414 FGFTSIIVAGVLEKERLQ 431
Cdd:TIGR00926 327 LAALSFFVAALVQLKVNP 344
yjdL_sub1_fam TIGR00924
amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes ...
199-512 2.02e-06

amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273342 [Multi-domain]  Cd Length: 475  Bit Score: 50.61  E-value: 2.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  199 FNWFYWSINLGAILSLLVVAFIEQNISFLWGYSII-VGLVG--LAFFIFLFATPVFITKP---PTGSQVSSMLKLAFQNC 272
Cdd:TIGR00924 143 FTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAaVGMVIglLTFFAGRHMLRDIGSVPdplSGQGKTYGKLLLALLAA 222
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  273 CP----CRRSSSRDSESAHLLPDQRSNQPGP------SPQEDMANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLqglhl 342
Cdd:TIGR00924 223 LAlvffCAWLMHHVVIANILLMTVTLAVIIFffrlafKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNF----- 297
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  343 hipnIFRTNPNISLLlrsdssNYRIPEAWLLLANVAVILILIPVKDHLIDPLLLRCKLlPSSLQKMALGMFFgftsiIVA 422
Cdd:TIGR00924 298 ----FADNNMHHEML------GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKD-PTTPLKFTLGMLF-----CGA 361
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542  423 GVLEKERLQYIAANQTvpqligkdlyyaaPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGV 502
Cdd:TIGR00924 362 SFLTFAASIWFADAGG-------------LTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM 428
                         330
                  ....*....|
gi 225007542  503 GSLLGsGLVA 512
Cdd:TIGR00924 429 GSLLG-GYLA 437
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
453-492 5.26e-06

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 49.37  E-value: 5.26e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 225007542  453 LSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAI 492
Cdd:TIGR00926 563 VSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVL 602
tppB PRK09584
dipeptide/tripeptide permease DtpA;
453-568 4.77e-03

dipeptide/tripeptide permease DtpA;


Pssm-ID: 181969  Cd Length: 500  Bit Score: 39.74  E-value: 4.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 225007542 453 LSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSFPggwmycpkdfGNINN 532
Cdd:PRK09584 380 VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVP----------DNVTD 449
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 225007542 533 CQMD-----RYFFLLAGIEAVTAVLFLWIAGRYERTRQDPA 568
Cdd:PRK09584 450 PLMSlevygRVFLQIGIATAVIAVLMLLTAPKLNRMTQDDS 490
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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