|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
35-664 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1152.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 35 FSVGENKKASAKVSDAISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNM 114
Cdd:PTZ00139 3 AVPAFNRLTRTFFSGHLSSAYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNM 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 115 EEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVAD 194
Cdd:PTZ00139 83 TEDDWRWHAYDTVKGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAAD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 195 RTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTST 273
Cdd:PTZ00139 163 RTGHAMLHTLYGQSLKYDCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 274 GDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIRE 353
Cdd:PTZ00139 243 GDGGAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILE 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 354 GRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLKHVNG-QDQIV 432
Cdd:PTZ00139 323 GRGCGPNKDHIYLDLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGdDDKIV 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 433 PGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDKVPSIKANAGEESVMNLDKLRFADGSIRTSELR 512
Cdd:PTZ00139 403 PGLLAAGEAACASVHGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIR 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 513 LNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAH 592
Cdd:PTZ00139 483 KRMQRTMQKHAAVFRIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAH 562
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 54607098 593 AREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYV-DIKTGKVTLEYRPVIDKTLNEaDCATVPPAIRSY 664
Cdd:PTZ00139 563 ARDDFPERDD-----------------KNWMKHTLSYIrDVKKGKVRLTYRPVITTPLDN-EMETVPPAKRVY 617
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
80-664 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 1070.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMP 159
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 160 FSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCI 239
Cdd:TIGR01816 81 FSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 240 EDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 319
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 320 NSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 399
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 400 IPVLPTVHYNMGGIPTNYKGQVLKHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGD 479
Cdd:TIGR01816 321 IPVLPTVHYNMGGIPTNYHGQVLRDGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 480 KVPSIKANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWN 559
Cdd:TIGR01816 401 DVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVWN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 560 TDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYVDIKTGKVTL 639
Cdd:TIGR01816 481 TDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDD-----------------ENWLKHTLSYVDINTGKVLL 543
|
570 580
....*....|....*....|....*
gi 54607098 640 EYRPVIDKTLNEADCAtvpPAIRSY 664
Cdd:TIGR01816 544 SYKPVIFKPLTVADFE---PKKRVY 565
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
43-664 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 1049.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 43 ASAKVSDAISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Cdd:PLN00128 32 SRFFSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWH 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 123 FYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLH 202
Cdd:PLN00128 112 MYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 203 TLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVT 281
Cdd:PLN00128 192 TLYGQAMKHNTQFFVEYFALDLIMDSdGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVA 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 282 RAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEK 361
Cdd:PLN00128 272 RAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEK 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 362 DHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVL-KHVNGQDQIVPGLYACGE 440
Cdd:PLN00128 352 DHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVtIKGDDPDAVVPGLMAAGE 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 441 AACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDKVPSIKANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQ 520
Cdd:PLN00128 432 AACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQ 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 521 NHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR 600
Cdd:PLN00128 512 NNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAREDFTKR 591
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 54607098 601 VDeydyskpiqgqqkkpfgEHWRKHTLSYVDikTGKVTLEYRPVIDKTLNEaDCATVPPAIRSY 664
Cdd:PLN00128 592 DD-----------------ENWMKHTLGYWE--EGKVRLDYRPVHMNTLDD-EVETFPPKARVY 635
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
82-664 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 788.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 82 EAGFNTACLTKLFPTRSHTVAAQGGINAALGNME-EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPF 160
Cdd:TIGR01812 20 KAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDpDDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHWGVPF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 161 SRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE 240
Cdd:TIGR01812 100 SRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLK 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 241 DGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILIN 320
Cdd:TIGR01812 172 TGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVN 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 321 SQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG-PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 399
Cdd:TIGR01812 252 KNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 400 IPVLPTVHYNMGGIPTNYKGQVLKhvngqDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESC-RPG 478
Cdd:TIGR01812 332 IPVRPTAHYSMGGIPTDYTGRVIC-----ETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEYAaKTG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 479 DKVPSIKANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVW 558
Cdd:TIGR01812 407 NPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRINDKSKVF 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 559 NTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYVDiKTGKVT 638
Cdd:TIGR01812 487 NTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDD-----------------ENWLKHTLAYYD-NPGTPR 548
|
570 580
....*....|....*....|....*.
gi 54607098 639 LEYRPVidktlneaDCATVPPAIRSY 664
Cdd:TIGR01812 549 LEYKPV--------TITKYEPAERKY 566
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
85-645 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 557.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 85 FNTACLTKLFPTRSHTVAAQGGINAALGNME-EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRT 163
Cdd:PRK05945 29 LDVAVVAKTHPIRSHSVAAQGGIAASLKNVDpEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 164 EDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGS 243
Cdd:PRK05945 109 PDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 244 IHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQG 323
Cdd:PRK05945 181 LEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 324 ERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE----KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 399
Cdd:PRK05945 261 DRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEP 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 400 IPVLPTVHYNMGGIPTNYKGQVLKHVngqDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRpGD 479
Cdd:PRK05945 341 MPVRPTVHYCMGGIPVNTDGRVRRSA---DGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEYVQ-GR 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 480 KVPSI-KANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVW 558
Cdd:PRK05945 417 KLPEVdEQRYLKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKCW 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 559 NTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYVDikTGKVT 638
Cdd:PRK05945 497 NTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDD-----------------QNFLKHTLAYYS--PAGID 557
|
....*..
gi 54607098 639 LEYRPVI 645
Cdd:PRK05945 558 IQYMPVV 564
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
81-647 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 542.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 81 SEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPF 160
Cdd:PRK06069 28 SGGKLSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 161 SRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV-EYFALDLLMENGECRGVIALCI 239
Cdd:PRK06069 108 SRRPDGRISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRFDNIHFYdEHFVTSLIVENGVFKGVTAIDL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 240 EDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 319
Cdd:PRK06069 180 KRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLI 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 320 NSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKD--HVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTK 397
Cdd:PRK06069 260 NKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlcYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 398 EPIPVLPTVHYNMGGIPTNYKGQVLKHvngQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESC-- 475
Cdd:PRK06069 340 EPIPVRPAAHYTMGGIHTDVYGRVLTA---DGEWVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRIAGEQAAEYAlk 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 476 RPGDKVPSIKANAGEESVMnLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRG 555
Cdd:PRK06069 417 RPAPSSPVEKLAEKEEKRI-FDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDKS 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 556 MVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYVDikTG 635
Cdd:PRK06069 496 RIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDD-----------------ENWLKHTLAYYT--GG 556
|
570
....*....|...
gi 54607098 636 KVTLEYRPV-IDK 647
Cdd:PRK06069 557 GPKVTYTPVtITK 569
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
88-664 |
5.10e-165 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 485.29 E-value: 5.10e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 88 ACLTKLFPTRSHTVAAQGGinAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGK 167
Cdd:PRK09231 33 ALISKVYPMRSHTVAAEGG--SAAVAQDHDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKPDGS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 168 IYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSY-FVEYFALDLLMENGECRGVIALCIEDGSIHR 246
Cdd:PRK09231 111 VNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYPQIQrFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQ 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 247 IRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERF 326
Cdd:PRK09231 183 IRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRY 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 327 MERYA-----PVAK------DLASRDVVSRSMTLEIREGRGC-GPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVD 394
Cdd:PRK09231 263 LQDYGlgpetPLGEpknkymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVD 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 395 VTKEPIPVLPTVHYNMGGIPTNykgqvlkhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAES 474
Cdd:PRK09231 343 PVKEPIPVRPTAHYTMGGIETD--------QNCETRI-KGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAAER 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 475 CRPGDKVPS--IKANAgEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTF 552
Cdd:PRK09231 414 AATAGPGNEaaLDAQA-ADVEQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVRIT 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 553 DRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARED--YKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYV 630
Cdd:PRK09231 493 DTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDD-----------------VNFLKHTLAFY 555
|
570 580 590
....*....|....*....|....*....|....*
gi 54607098 631 DiKTGKVTLEYRPV-IDKTlneadcatvPPAIRSY 664
Cdd:PRK09231 556 N-ADGTPRIEYSDVkITKS---------PPAKRVY 580
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
80-597 |
8.43e-155 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 456.88 E-value: 8.43e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGfNTACLTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMP 159
Cdd:COG0029 23 LAERG-RVTLLTKGELGESNTRWAQGGIAAVLD--PGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELGVP 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 160 FSRTEDGKIYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDT-SYFVEYFALDLLME-NGECRGVIAL 237
Cdd:COG0029 100 FDRDEDGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHPNiTVLENHFAVDLITDaDGRCVGAYVL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 238 CIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGE 314
Cdd:COG0029 172 DEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISEAVRGE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 315 GGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGRGcgpekDHVYLQLHHLPPEQLATRLPGISETAMIFaGVD 394
Cdd:COG0029 252 GAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYARCLEL-GID 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 395 VTKEPIPVLPTVHYNMGGIPTNykgqvlkhVNGQ-DqiVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAE 473
Cdd:COG0029 325 ITKEPIPVAPAAHYTMGGVATD--------LDGRtS--IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAEDIAA 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 474 SCRPGDKVPSIKanAGEESVMNldklrfADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFd 553
Cdd:COG0029 395 RLAESPLPPEIP--EWDESVTD------PDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREEIEEYANF- 465
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 54607098 554 rgmvwnTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:COG0029 466 ------RVSRDLLELRNLLLVAELIVRAALARKESRGAHYRSDY 503
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
80-644 |
7.99e-146 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 435.86 E-value: 7.99e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTACLTKLFPTRSHTVAAQGGINAAL-GNME-EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYG 157
Cdd:PRK06452 24 IASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLERWG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 158 MPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 237
Cdd:PRK06452 104 ALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAM 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 238 CIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGI 317
Cdd:PRK06452 176 QMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISEAARGEGGI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 318 LINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCgpEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTK 397
Cdd:PRK06452 256 LKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF--PGGYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFT 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 398 EPIPVLPTVHYNMGGIPTNykgqvlkhVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRP 477
Cdd:PRK06452 334 EPIPVRPAQHYYMGGIDVD--------IDGRNPDIVGLFSAGEAACVSVHGANRLGSNSLLDTLVFGQVTGRTVVQFLKS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 478 GDKVPSIKANA-GEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGM 556
Cdd:PRK06452 406 NPGNPTSNYEKeAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKLRGMISNMYVTDKSK 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 557 VWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYvdIKTGK 636
Cdd:PRK06452 486 VYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDD-----------------NNWLKHTIAY--LRGNT 546
|
....*...
gi 54607098 637 VTLEYRPV 644
Cdd:PRK06452 547 VEVTFKPV 554
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
80-476 |
4.21e-142 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 421.55 E-value: 4.21e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNME----EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELEN 155
Cdd:COG1053 22 AAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQkaagEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWLEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 156 YGMPFSRTEDGKIYQraFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVI 235
Cdd:COG1053 102 QGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVDDGRVVGVV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 236 ALCiEDGSIHRIRAKNTVIATGGYGRTY------------FSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGA 303
Cdd:COG1053 172 ARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGD 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 304 GCLITEGCRG-EGGILINSQGERFMERYAPvakdlasRDVVSRSMTLEIREG------------------RGCGPEKDHV 364
Cdd:COG1053 251 GGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPaylvldlrhrrrleeyleAGYLVKADTI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 365 ylqlhhlppEQLATRLpGISETAMIF----------AGVDVTKE-----------PIPVLPTVHYNMGGIPTNYKGQVLk 423
Cdd:COG1053 324 ---------EELAAKL-GIDAAELAAtvarynaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVL- 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 54607098 424 hvNGQDQIVPGLYACGEAaCASVHGANRLGANSLLDLVVFGRACALSIAESCR 476
Cdd:COG1053 393 --DADGTPIPGLYAAGEA-AGSVHGANRLGGNSLGDALVFGRIAGRHAAEYAK 442
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
82-664 |
1.71e-140 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 425.16 E-value: 1.71e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 82 EAGFNTACLTKLFPTRSHTVAAQGGINAALGN--MEE-DNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGM 158
Cdd:PRK08626 26 QRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNavKGEgDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 159 PFSR-----------------TED----GKIYQRAFGGQSlKFgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV 217
Cdd:PRK08626 106 PWTRvtagprtvvingekvtiTEKeeahGLINARDFGGTK-KW-------RTCYTADGTGHTMLYAVDNEAIKLGVPVHD 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 218 EYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGL-PCQDLEFVQFH 296
Cdd:PRK08626 178 RKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFH 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 297 PTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGC-GPEKDHVYLQLHHLPPEQ 375
Cdd:PRK08626 258 PTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGRKH 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 376 LATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQV--LKhvngqdqivpGLYACGEAACASVHGANRLG 453
Cdd:PRK08626 338 IETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESygLK----------GLFSAGEAACWDMHGFNRLG 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 454 ANSLLDLVVFGRACALSIAESCRPGDKVPSIK--ANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSV 531
Cdd:PRK08626 408 GNSLAETVVAGMIVGKYVADFCLGNELEIDTAlvEKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPE 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 532 LQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDeydyskpiq 611
Cdd:PRK08626 488 LEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRND--------- 558
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 54607098 612 gqqkkpfgEHWRKHTLSY-VDIKTGKVTLEYRPViDKTLNEadcatVPPAIRSY 664
Cdd:PRK08626 559 --------RDWLNRTLASwPEGEALEPTLEYEPL-DVMKME-----LPPGFRGY 598
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
100-604 |
2.92e-135 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 407.83 E-value: 2.92e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 100 TVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLK 179
Cdd:PRK06263 46 TVMAEGGYNAVLN--PEDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSFN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 180 fgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGSIHRIRAKNTVIATGG 258
Cdd:PRK06263 124 --------RTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVdENREVIGAIFLDLRNGEIFPIYAKATILATGG 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 259 YGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGI----YGAGCLITEGCRGEGGILINSQGERFMERYAPVA 334
Cdd:PRK06263 196 AGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPER 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 335 KDLASRDVVSRSMTLEIREGRGCgpekDH--VYLQLHHLPPEQLATRLPGISETAMIFaGVDVTKEPIPVLPTVHYNMGG 412
Cdd:PRK06263 276 MELSTRDVVARAIYTEIQEGRGT----NHggVYLDVTHLPDEVIEEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGG 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 413 IPTNYKGQVlkhvngqdqIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDkvPSIKANAGEES 492
Cdd:PRK06263 351 IRINEDCET---------NIPGLFACGEVA-GGVHGANRLGGNALADTQVFGAIAGKSAAKNAENNE--FKKVNRSVEED 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 493 VMNLDKL-RFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRgmvwnTDLVETLELQNL 571
Cdd:PRK06263 419 IARIKSEiKFLNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVNGI-----VDFNKALELENM 493
|
490 500 510
....*....|....*....|....*....|...
gi 54607098 572 MLCALQTIYGAEARKESRGAHAREDYKVRVDEY 604
Cdd:PRK06263 494 ILVAELVIKSALLRKESRGAHYREDYPETNDEW 526
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
80-457 |
1.99e-133 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 397.81 E-value: 1.99e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTACLTKLFPTRSHTVAAQGGINAALG--NMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYG 157
Cdd:pfam00890 18 AAEAGLKVAVVEKGQPFGGATAWSSGGIDALGNppQGGIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEALG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 158 MPFSRTEDGKIYQRAFGGQSLKfgkggqAHRCCCVADR-----TGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECR 232
Cdd:pfam00890 98 VPFSRTEDGHLDLRPLGGLSAT------WRTPHDAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVEDGRVT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 233 GVIALCIEDGSIHRIRAK-NTVIATGGYGR---------TYFSCTSAHTSTGDGTAMVTRAGLPCQD--LEFVQFHPTGI 300
Cdd:pfam00890 172 GAVVENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 301 YG----AGCLItEGCRGEGGILINSQGERFMeryapvaKDLASRDVVSRSMT-LEIREGRGcgpekDHVYLQLHH-LPPE 374
Cdd:pfam00890 252 VGirlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRG-----ANVYLDASGsLDAE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 375 QLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLkhvNGQDQIVPGLYACGEAACASVHGANRLGA 454
Cdd:pfam00890 319 GLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVL---DADGQPIPGLYAAGEVACGGVHGANRLGG 395
|
...
gi 54607098 455 NSL 457
Cdd:pfam00890 396 NSL 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
60-597 |
1.14e-109 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 344.33 E-value: 1.14e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 60 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNM-EEDNWRWHFYDTVKGSDWLGDQDA 138
Cdd:PRK07803 7 HSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVnPKDNWQVHFRDTMRGGKFLNNWRM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 139 IHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGR--SLRYDTSY- 215
Cdd:PRK07803 87 AELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHTYP--------RLAHVGDRTGLELIRTLQQKivSLQQEDHAe 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 216 ----------FVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGL 285
Cdd:PRK07803 159 lgdyearikvFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 286 PCQDLEFVQFHPTGIYGA----GCLITEGCRGEGGILINSQGERFMERYAP-VAK------------------------D 336
Cdd:PRK07803 239 TLINMEFVQFHPTGMVWPpsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdVFKgqyaeteeeadrwykdndnnrrppE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 337 LASRDVVSRSMTLEIREGRGcgpeKDH--VYLQLH-HLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGI 413
Cdd:PRK07803 319 LLPRDEVARAINSEVKAGRG----SPHggVYLDIAsRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGV 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 414 PTNykgqvlkhVNGQDQIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDKVPSIKANAGEESV 493
Cdd:PRK07803 395 EVD--------PDTGAATVPGLFAAGECA-GGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEEAVDAAA 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 494 -MNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKT-----FDRGmvWNTdlveTLE 567
Cdd:PRK07803 466 rEALAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVeghrqYNPG--WHL----ALD 539
|
570 580 590
....*....|....*....|....*....|
gi 54607098 568 LQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK07803 540 LRNMLLVSECVARAALERTESRGGHTRDDH 569
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
88-602 |
3.12e-102 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 323.97 E-value: 3.12e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 88 ACLTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGK 167
Cdd:PLN02815 55 AIITKDEPHESNTNYAQGGVSAVLD--PSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASFDHGEDGN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 168 IYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY-FALDLLM-ENGE---CRGVIALCIEDG 242
Cdd:PLN02815 133 LHLAREGGHS--------HHRIVHAADMTGREIERALLEAVKNDPNITFFEHhFAIDLLTsQDGGsivCHGADVLDTRTG 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 243 SIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC------------LITEG 310
Cdd:PLN02815 205 EVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakarenafLITEA 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 311 CRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGRgcgpEKdHVYLQLHHLPPEQLATRLPGISETAMIF 390
Cdd:PLN02815 285 VRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPREEILSHFPNIAAECLKR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 391 aGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlkhvngqdqIVPGLYACGEAACASVHGANRLGANSLLDLVVFG-RACAL 469
Cdd:PLN02815 359 -GLDITKQPIPVVPAAHYMCGGVRTGLQGET---------NVQGLYAAGEVACTGLHGANRLASNSLLEALVFArRAVQP 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 470 SIAESCRPGDKVPSIKANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHl 549
Cdd:PLN02815 429 SIDHMARALRDVSAAAAWARPVAPTALADSVMDEILEWTAVVRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWEA- 507
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 54607098 550 KTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVD 602
Cdd:PLN02815 508 ILFRHGWKPTMVGLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
80-597 |
5.83e-97 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 306.73 E-value: 5.83e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFnTACLTKLFPTRSHTVAAQGGINAALgnMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMP 159
Cdd:TIGR00551 21 LAEKGR-VSVITKASVTDSNSYYAQGGIAAAL--AETDSIDAHVEDTLAAGAGICDEEAVWFVVSDGSEAVQFLVSHGVT 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 160 FSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLMENGECRGViaLC 238
Cdd:TIGR00551 98 FDRNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEKHARsEPNVNIIEGEFALDLLIETGRCAGV--FV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 239 IEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEG 315
Cdd:TIGR00551 168 QGSGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfLITEAVRGEG 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 316 GILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGrgcgpEKDHVYLQLHHLPPeqLATRLPGISETaMIFAGVDV 395
Cdd:TIGR00551 248 AKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN--FKDRFPTIYAV-CRGAGIDP 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 396 TKEPIPVLPTVHYNMGGIPTNykgqvlkhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAesc 475
Cdd:TIGR00551 319 EREPIPVAPGAHYTMGGISVD--------AFGRTTI-PGLYAIGETACTGLHGANRLASNSLLECLVFGLRAARTIS--- 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 476 RPGDKVPSIKANAGEESVMNLDKLRFADGSIRTSELRLnmqkSMQNHAAVFRVGSVLQEGCEKISQlygdlkhlktfdrg 555
Cdd:TIGR00551 387 REPPYASREYQSGVWDEPRSENPLDRHELQHKMSSLRS----VLWNHAGIVRLEWSLREALRKLVE-------------- 448
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 54607098 556 mvWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:TIGR00551 449 --IQDEVDERMELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
103-597 |
6.19e-94 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 299.52 E-value: 6.19e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 103 AQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKIyqrAFGGQSlkfgk 182
Cdd:PRK07512 50 AQGGIAAALG--PDDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRL---ALGLEA----- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 183 ggqAH---RCCCVA-DRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLMENGECRGViaLCIEDGSIHRIRAKNTVIATG 257
Cdd:PRK07512 120 ---AHsrrRIVHVGgDGAGAAIMRALIAAVRATPSITVLEgAEARRLLVDDGAVAGV--LAATAGGPVVLPARAVVLATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 258 GYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGaGC----LITEGCRGEGGILINSQGERFMERYAPv 333
Cdd:PRK07512 195 GIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDI-GRdpapLATEALRGEGAILINEDGERFMADIHP- 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 334 AKDLASRDVVSRSMTLEIREGRGcgpekdhVYLQLHHLPPEQLATRLPGISEtAMIFAGVDVTKEPIPVLPTVHYNMGGI 413
Cdd:PRK07512 273 GAELAPRDVVARAVFAEIAAGRG-------AFLDARAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 414 PTNYKGQvlkhvngqdQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGdKVPSIKANAGEESV 493
Cdd:PRK07512 345 AVDADGR---------SSLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAA-AAPLSAAAAPALDP 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 494 MNLDKLRfadgsirtselrlnmqKSMQNHAAVFRVGSVLQEGCEKISQLYGdlkhlktfDRGMVWNTDLVetlelqnlml 573
Cdd:PRK07512 415 ADLALLR----------------PIMSRHVGVLRDADGLRRAIAALLPLEA--------GAGPAADPATV---------- 460
|
490 500
....*....|....*....|....
gi 54607098 574 cALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK07512 461 -ALLIAVAALAREESRGAHFRTDF 483
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
88-627 |
4.73e-92 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 295.80 E-value: 4.73e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 88 ACLTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTedgk 167
Cdd:PRK07395 35 GLITKDTLKTSASDWAQGGIAAAIA--PDDSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRH---- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 168 iyqrafgGQSLKFGKGGqAHRCCCV---ADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLM--ENGECRGViaLCIED 241
Cdd:PRK07395 109 -------GQHLALTLEA-AHSRPRVlhaADTTGRAIVTTLTEQVLqRPNIEIISQALALSLWLepETGRCQGI--SLLYQ 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 242 GSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEGGIL 318
Cdd:PRK07395 179 GQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGAprfLISEAVRGEGAHL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 319 INSQGERFMERYAPvAKDLASRDVVSRSMTLEIREgRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFaGVDVTKE 398
Cdd:PRK07395 259 VDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATDPATAHVWLDLRPIPAERIRRRFPNIIRVCQKW-GIDVFQE 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 399 PIPVLPTVHYNMGGIPTNykgqvlkhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACA---LSIAESC 475
Cdd:PRK07395 336 PIPVAPAAHYWMGGVVTD--------LNNQTSI-PGLYAVGETASTGVHGANRLASNSLLECLVFAAQLAqleLPIEPPA 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 476 RPGDKVPSIKANAGEESvMNLDKLRfadgsirtsELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLK----- 550
Cdd:PRK07395 407 SPDLPPISFIIDASQWK-NEQEQIQ---------RIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALPlsqfl 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 551 ---------TFDRGMVwNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYkvrvdeydyskPiqgqQKKPfgeH 621
Cdd:PRK07395 477 anlppgqtvSFNGPDA-EQQLRLWAETRNLLDIAYLILKSALFRTESRGGHYRLDY-----------P----QTDP---A 537
|
....*.
gi 54607098 622 WRKHTL 627
Cdd:PRK07395 538 WQVHTL 543
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
90-597 |
1.19e-90 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 290.74 E-value: 1.19e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 90 LTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKiy 169
Cdd:PRK08071 31 ITKKTKRNSNSHLAQGGIAAAVA--TYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGP-- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 170 qrafggqsLKFGKGGqAHRCCCV----ADRTGHSLLHTLYGRSLRYDTsyFVEY-FALDLLMENGECRGVIALcIEDGSI 244
Cdd:PRK08071 107 --------LHLGKEG-AHRKRRIlhagGDATGKNLLEHLLQELVPHVT--VVEQeMVIDLIIENGRCIGVLTK-DSEGKL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 245 HRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAG-C--LITEGCRGEGGILINS 321
Cdd:PRK08071 175 KRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGrCvgLVSEAVRGEGAVLINE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 322 QGERFMERYAPVaKDLASRDVVSRSMTLEIREGrgcgpekDHVYLQLHHLPpeQLATRLPGIseTAMI-FAGVDVTKEPI 400
Cdd:PRK08071 255 DGRRFMMGIHPL-ADLAPRDVVARAIHEELLSG-------EKVYLNISSIQ--NFEERFPTI--SALCeKNGVDIETKRI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 401 PVLPTVHYNMGGIPTNYKGQVlkhvngqdqIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDK 480
Cdd:PRK08071 323 PVVPGAHFLMGGVKTNLDGET---------SIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILTKATKPRL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 481 VPSikaNAGEESVMNLDKLRfadgsiRTSELrlnmQKSMQNHAAVFRVGSVLQEGCEKISQLYGdlkhlktfdRGMVWNT 560
Cdd:PRK08071 394 NPF---AEKEKKFIVLNHLP------TKEEI----QEKMMKYVGIVRTEQSLSEAKRWLEKYGV---------RNMILDH 451
|
490 500 510
....*....|....*....|....*....|....*....
gi 54607098 561 D--LVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK08071 452 DalTNEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDY 490
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
88-597 |
3.15e-86 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 280.26 E-value: 3.15e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 88 ACLTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDgk 167
Cdd:PRK09077 34 AVLSKGPLSEGSTFYAQGGIAAVLD--ETDSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPFTTDEQ-- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 168 iyqrAFGGQSLKFGK-GGQAHR-CCCVADRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLMEN------GECRGVIALC 238
Cdd:PRK09077 110 ----ANGEEGYHLTReGGHSHRrILHAADATGKAVQTTLVERARNHPNITVLErHNAIDLITSDklglpgRRVVGAYVLN 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 239 IEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEG 315
Cdd:PRK09077 186 RNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYHPQArsfLITEALRGEG 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 316 GILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREgRGCgpekDHVYLQLHHLPPEQLATRLPGISETAMIFaGVDV 395
Cdd:PRK09077 266 AYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEMKR-LGA----DCVYLDISHKPADFIRQHFPTIYERCLEL-GIDI 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 396 TKEPIPVLPTVHYNMGGIPTNYKGQVlkhvngqDqiVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESC 475
Cdd:PRK09077 339 TKEPIPVVPAAHYTCGGVMVDLHGRT-------D--LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSRL 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 476 RPGDKVPSIKA-------NAGEESVM--NLDKLRFA--D--GSIRTSElRLnmqksmqnHAAVFRVGSVLQEgcekISQL 542
Cdd:PRK09077 410 PKAPMPPTLPAwdesrvtDSDEEVVIqhNWHELRLFmwDyvGIVRTTK-RL--------ERALHRIRLLQQE----IDEY 476
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 54607098 543 YGDLKhlktfdrgmVWNtDLvetLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK09077 477 YANFR---------VSN-NL---LELRNLVQVAELIVRCAMERKESRGLHYTLDY 518
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
80-664 |
5.22e-83 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 273.00 E-value: 5.22e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGfntaCLTKLFP----TRSHTVAAQGGINAALGNMEEDNWRW-HFYDTVKGSDWLGDQDAIHYMTEQAPASVVELE 154
Cdd:PRK08641 22 AAEAG----VHVDLFSlvpvKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLD 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 155 NYGMPFSRTEDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLM-ENG 229
Cdd:PRK08641 98 RMGVMFNRTPEGLLDFRRFGGT--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEgwefLGAVLdDEG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 230 ECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC--LI 307
Cdd:PRK08641 170 VCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLM 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 308 TEGCRGEGG-ILINSQGER--FMERYAPVAKDLASRDVVSRsmtlEI-----REGRGCGPEkDHVYLQLHHLPPEQLATR 379
Cdd:PRK08641 250 SESARGEGGrVWTYKDGKPwyFLEEKYPAYGNLVPRDIATR----EIfdvcvEQKLGINGE-NMVYLDLSHKDPKELDIK 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 380 LPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYkgqvlkhvngqDQI--VPGLYACGEAAcASVHGANRLGANSL 457
Cdd:PRK08641 325 LGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDY-----------DQMtnIPGLFAAGECD-YSYHGANRLGANSL 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 458 LDLV----VFGRACALSIAESCRPGDKVPS--IKANAGEESVMNLDKLRfADGSIRTSELRLNMQKSMQNHAAVFRVGSV 531
Cdd:PRK08641 393 LSAIyggmVAGPNAVEYIKGLGKSADDVSSsvFEQALKQEQEKFDNILS-MDGTENAYVLHKELGEWMTDNVTVVRENDK 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 532 LQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDeydyskpiq 611
Cdd:PRK08641 472 LLETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERND--------- 542
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 54607098 612 gqqkkpfgEHWRKHTLSYVDIKTGKVTLEYRPVidktlneaDCATVPPAIRSY 664
Cdd:PRK08641 543 --------ENWLKTTMATYTPEGEEPEFSYEDV--------DTSLIPPRKRDY 579
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
80-664 |
3.90e-81 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 268.64 E-value: 3.90e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTacltKLF-----PTRSHTVAAQGGINAALGNMEEDNWRW-HFYDTVKGSDWLGDQDAIHYMTEQAPASVVEL 153
Cdd:TIGR01811 17 LAELGYHV----KLFsyvdaPRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEIIDLM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 154 ENYGMPFSRTEDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLM-EN 228
Cdd:TIGR01811 93 DAMGVPFAREYGGLLDTRSFGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIVvDG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 229 GECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC--- 305
Cdd:TIGR01811 165 NRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGTwqs 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 306 ---LITEGCRGEGGI----------LINS--QGER--FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQL 368
Cdd:TIGR01811 245 klrLMSESLRNDGRIwtpkekndnrDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVYLDF 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 369 HH----LPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKgqvlkhvngQDQIVPGLYACGEAAcA 444
Cdd:TIGR01811 325 SDaderLGRKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDYD---------QMTNIPGLFAAGECD-F 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 445 SVHGANRLGANSLLDLVVFGRACA-------LSIAESCRPGDKVPSIKANAGEESVMNLDKLRFADGSIRTSELRLNMQK 517
Cdd:TIGR01811 395 SQHGANRLGANSLLSAIADGYFALpftipnyLGPELSSEDMPEDAPEFQAALAEEQERFDRLLKMRGDENPYYLHRELGE 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 518 SMQNHAAVFRVGSVLQEGCEKISQLYGDL-KHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARED 596
Cdd:TIGR01811 475 IMTENCGVSRNNEKLLKTDEKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPE 554
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 54607098 597 YKVRVDEYDYSKpiqgqqkkpfgEHWRKHTLSYVDIKTGKVTLEYRPVidktlneaDCATVPPAIRSY 664
Cdd:TIGR01811 555 FPTPDGEAERND-----------EEFLKVTAWEFQGENDAPEFHYEEL--------DFELVPPRKRDY 603
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
80-604 |
2.67e-80 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 264.53 E-value: 2.67e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNmeEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMP 159
Cdd:PRK07804 35 ARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVALGAR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 160 FSRTEDGKIYQRAFGGQSlkfgkggqAHRcccVA----DRTG----HSLLHTLYGRSLRYDTSYFVeyfaLDLLM-ENGE 230
Cdd:PRK07804 113 FDESPDGRWALTREGGHS--------RRR---IVhaggDATGaevqRALDAAVRADPLDIREHALA----LDLLTdGTGA 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 231 CRGVIALCIEDGS---IHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIY-GAGC- 305
Cdd:PRK07804 178 VAGVTLHVLGEGSpdgVGAVHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLFlGPAAg 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 306 ----LITEGCRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREgRGcgpeKDHVYLQLHHLppEQLATRLP 381
Cdd:PRK07804 258 gqrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TG----DDHVYLDARGI--EGFARRFP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 382 GISEtAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlkhvngqdqIVPGLYACGEAACASVHGANRLGANSLLDLV 461
Cdd:PRK07804 330 TITA-SCRAAGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT---------SVPGLYAAGEVACTGVHGANRLASNSLLEGL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 462 VFGRACALSIAESCRPGDKVPSIKANAGEESVMnldklrfadgsirTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQ 541
Cdd:PRK07804 400 VVGERAGAAAAAHAAAAGRPRATPAVGPEPGLL-------------PALDRAELQRAMTRGAGVLRSAAGLARAADRLAA 466
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 54607098 542 LYGdlkhlKTFDRGmvwntdlVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDEY 604
Cdd:PRK07804 467 GAP-----ARVVPG-------RADWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDDEW 517
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
85-518 |
4.72e-71 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 236.89 E-value: 4.72e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 85 FNTACLTKLFPTRSHTVAAQGGINAALGnmeEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTE 164
Cdd:PRK06175 27 LKILMVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 165 DGKIYQRAfGGQSLkfgkggqaHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE--YFaLDLLMENGECRGviALCIEDG 242
Cdd:PRK06175 104 KELSYTKE-GAHSV--------NRIVHFKDNTGKKVEKILLKKVKKRKNITIIEncYL-VDIIENDNTCIG--AICLKDN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 243 SIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC-----LITEGCRGEGGI 317
Cdd:PRK06175 172 KQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkkfLISESVRGEGGK 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 318 LINSQGERFMeryapvaKDLASRDVVSRSMTLEIREgrgcgPEKDHVYLQLHHLPPEQLATRLPGISETAMIfAGVDVTK 397
Cdd:PRK06175 252 LLNSKGERFV-------DELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFLKNRFPTIYEECLK-RGIDITK 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 398 EPIPVLPTVHYNMGGIPTNYKGQV-LKHvngqdqivpgLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAEScr 476
Cdd:PRK06175 319 DAIPVSPAQHYFMGGIKVDLNSKTsMKN----------LYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKINSE-- 386
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 54607098 477 pgdkVPSIKANAGEESVM--NLDKLRFADGSIRTSELRLNMQKS 518
Cdd:PRK06175 387 ----IDNIKLNITKVYTLkhDVEYYSLLNKKIIIKEIEKLRGDL 426
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
512-664 |
9.62e-63 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 204.21 E-value: 9.62e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 512 RLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGA 591
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 54607098 592 HAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYVDIKTGKVTLEYRPVIDKTLneadcatVPPAIRSY 664
Cdd:pfam02910 81 HAREDYPERDD-----------------ENWLKHTLAYYDGDDGGPRLEYEPVTFTTL-------FPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
80-605 |
4.05e-58 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 203.11 E-value: 4.05e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTACLTKLfPTRSHTVAAQGGInaALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMP 159
Cdd:PRK08401 20 LAKKGFDVTIIGPG-IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 160 FSRTEdgkiyqrAFGGQSLkfgkggqaHRCCCVADRTGHSLLHTLYGRSLRYDTSyFVEYFALDLLMENGECRGVIAlci 239
Cdd:PRK08401 97 FEGNE-------LEGGHSF--------PRVFTIKNETGKHIIKILYKHARELGVN-FIRGFAEELAIKNGKAYGVFL--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 240 eDGSIHRIRAknTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC--LITEGCRGEGGI 317
Cdd:PRK08401 158 -DGELLKFDA--TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKRGtyLISEAVRGAGAK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 318 LINSQGERFMeryapvaKDLASRDVVSRSMTLEIREGRGcgpekdhVYLQLHHLppEQLATRLPGISeTAMIFAGVDVTK 397
Cdd:PRK08401 235 LVTGDGERFV-------NELETRDIVARAIYRKMQEGKG-------VFLDATGI--EDFKRRFPQIY-AFLRKEGIDPSR 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 398 EPIPVLPTVHYNMGGIPTN--YKGQVlkhvngqdqivPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESC 475
Cdd:PRK08401 298 DLIPVTPIAHYTIGGISVDtfYRTGI-----------KNLYAIGEAASNGFHGANRLASNSLLECIVSGLEVARTISRER 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 476 RPGDKVPSIKANAGEESvmNLDKLRfadgsirtselrlnmqKSMQNHAAVFRVGSVLQEGCEKISQLYGDlKHLKTFDRG 555
Cdd:PRK08401 367 PKLREVKEPPYHGYELG--DVDSIR----------------EILWNHAGIVRSEESLREGLKKLEGIEAD-PRLKLLAKG 427
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 54607098 556 mvwntdlvetlelqnLMLCALqtiygaeARKESRGAHAREDYKVRVDEYD 605
Cdd:PRK08401 428 ---------------VLECAL-------AREESRGAHYREDFPFMRKEFE 455
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
80-597 |
1.48e-46 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 174.62 E-value: 1.48e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 80 LSEAGFNTACLTklF---PTRSHTVAAQGGINAAlGNMEEDN---WRwHFYDTVKGSDWLGDQDAIHYMTEQAPASVVEL 153
Cdd:PRK07573 54 LGELGYNVKVFC--YqdsPRRAHSIAAQGGINAA-KNYQNDGdsvYR-LFYDTVKGGDFRAREANVYRLAEVSVNIIDQC 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 154 ENYGMPFSRTEDGKIYQRAFGG-Q-SLKFGKGGQahrcccvadrTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLME 227
Cdd:PRK07573 130 VAQGVPFAREYGGLLANRSFGGaQvSRTFYARGQ----------TGQQLLLGAYQALSRQIAAGTVKMYTrtemLDLVVV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 228 NGECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGL----PCqdleFVQFHPTGIYGA 303
Cdd:PRK07573 200 DGRARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGSNATAIWRAHKKGAyfanPC----FTQIHPTCIPVS 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 304 G------CLITEGCRGEGGILINSQ------------GER--FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDH 363
Cdd:PRK07573 276 GdyqsklTLMSESLRNDGRIWVPKKkgdkrkpndipeEERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPTGLG 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 364 VYLQL----HHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYkgqvlkhvNGQDQIvPGLYACG 439
Cdd:PRK07573 356 VYLDFadaiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDY--------NLMSTI-PGLFVIG 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 440 EAACaSVHGANRLGANSLLdlvvfgRACA-------LSIAESCRPGDKVPSIKAN-----AGEESVMN-LDKLRFADGSI 506
Cdd:PRK07573 427 EANF-SDHGANRLGASALM------QGLAdgyfvlpYTIGNYLADTIGTPKVSTDhpefkEAEAEVQDrIDRLLNIKGKR 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 507 RTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDL-KHLKTFDRGMVWNTDL------VETLELQNLMlcalqtI 579
Cdd:PRK07573 500 TVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQELekagrvADFLELGELM------C 573
|
570
....*....|....*...
gi 54607098 580 YGAEARKESRGAHAREDY 597
Cdd:PRK07573 574 RDALHREESCGGHFREEH 591
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
103-465 |
1.99e-39 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 150.57 E-value: 1.99e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 103 AQGGINAALGNME-----EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVvELENYGMPFSRTedgKIYQraFGGQS 177
Cdd:TIGR01813 42 AAGGMNAAGTDQQkalgiEDSPELFIKDTLKGGRGINDPELVRILAEESKDAV-DWLQDGVGARLD---DLIQ--LGGHS 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 178 LKfgkggQAHRCCCVAdRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALcIEDGSIHRIRAKNTVIAT 256
Cdd:TIGR01813 116 VP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQdDQGSVVGVVVK-GKGKGIYIKAAKAVVLAT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 257 GGYGR------TY------FSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTG-IYGAGCLITEGCRGEGGILINSQG 323
Cdd:TIGR01813 189 GGFGSnkemiaKYdptlkhLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 324 ERFMEryapvakDLASRDVVSRsmtlEIREGRGCGP-----EKDHV-------YLQLHHLPP----EQLATRLpGISETA 387
Cdd:TIGR01813 269 ERFMN-------ELATRDKVSD----AILAQPGKDAylifdDDVYKkakmvdnYYRLGVAYKgdslEELAKQF-GIPAAA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 388 ----------------------MIFAGVDVTKEP---IPVLPTVHYNMGGIPTNYKGQVLkhvNGQDQIVPGLYACGEAA 442
Cdd:TIGR01813 337 lkqtikdyngyvasgkdtpfgrPMDMPTDLSKAPyyaIKVTPGVHHTMGGVKINTKAEVL---DANGKPIPGLFAAGEVT 413
|
410 420
....*....|....*....|...
gi 54607098 443 cASVHGANRLGANSLLDLVVFGR 465
Cdd:TIGR01813 414 -GGVHGANRLGGNAIADCIVFGR 435
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
82-465 |
2.88e-35 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 139.97 E-value: 2.88e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 82 EAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEE-----DNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENY 156
Cdd:PRK06481 82 DAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKaqgiaDSNDKFYEETLKGGGGTNDKALLRYFVDNSASAIDWLDSM 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 157 GMPFSRTEdgkiyqrAFGGQSLKfgkggQAHRcccVADRT--GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGV 234
Cdd:PRK06481 162 GIKLDNLT-------ITGGMSEK-----RTHR---PHDGSavGGYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVTGV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 235 IALcIEDGSIHRIRAKNTVIATGGYGRT------------YFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYG 302
Cdd:PRK06481 227 KVK-INGKETKTISSKAVVVTTGGFGANkdmiakyrpdlkGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 303 AGCLITEGCRGEGGILINSQGERFM-----------------ERYAPVAKDLASRDvvsRSMTLEIREGRGCGPEKDHV- 364
Cdd:PRK06481 306 KSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKD---RVKAIAQYEEKGFVEEGKTId 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 365 -YLQLHHLPPEQLATRLPGISE-------------TAMifaGVDVTKEP---IPVLPTVHYNMGGIPTNYKGQVLKHvng 427
Cdd:PRK06481 383 eLAKKINVPAETLTKTLDTWNKavknkkdeafgrtTGM---DNDLSTGPyyaIKIAPGIHYTMGGVKINTNTEVLKK--- 456
|
410 420 430
....*....|....*....|....*....|....*...
gi 54607098 428 QDQIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGR 465
Cdd:PRK06481 457 DGSPITGLYAAGEVT-GGLHGENRIGGNSVADIIIFGR 493
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
241-465 |
2.64e-17 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 86.37 E-value: 2.64e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 241 DGSIHRIRAKNTVIATGGYG---------RTY------FSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYG--- 302
Cdd:PTZ00306 601 SGQVMDLLADAVILATGGFSndhtpnsllREYapqlsgFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkd 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 303 ----AGCLITEGCRGEGGILINSQGERFMeryapvaKDLASRDVVS---------------------------------- 344
Cdd:PTZ00306 681 psnrTKYLGPEALRGSGGVLLNKNGERFV-------NELDLRSVVSqaiiaqgneypgsggskfaycvlneaaaklfgkn 753
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 345 -------------RSMTLE-IREGRGCGPEKDHVYL-QLHHLPPEQLATRLPGisetAMIFAGVDVTKEPIPV---LPTV 406
Cdd:PTZ00306 754 slgfywkrlglfqRVDDVKgLAKLIGCPVENLHRTLeTYERLSTKKVACPLTG----KVVFPCVVGTQGPYYVafvTPSI 829
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 54607098 407 HYNMGGIPTNYKGQVLKHVNGQDQI-----VPGLYACGEAAcASVHGANRLGANSLLDLVVFGR 465
Cdd:PTZ00306 830 HYTMGGCLISPSAEMQMEDNSVNIFedrrpILGLFGAGEVT-GGVHGGNRLGGNSLLECVVFGK 892
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
130-644 |
1.20e-15 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 80.48 E-value: 1.20e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 130 SDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDG-----KIYQraFGGQSLKFgkggqahrcccvadRTGHSLLHTL 204
Cdd:PRK08275 80 NDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGdyavkKVHH--MGSYVLPM--------------PEGHDIKKVL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 205 YGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGSIHRIRAKNTVIATGGYGR-----------TYFSCTSAhts 272
Cdd:PRK08275 144 YRQLKRARVLITNRIMATRLLTDAdGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasgylfgTYENPTNA--- 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 273 tGDGTAMVTRAGLPCQDLEFVQFHP--TGIYGAGCLITEGcrGEGGILINSQGERFMERYAPvakdlasrdvvSRSMTLE 350
Cdd:PRK08275 221 -GDGYAMAYHAGAELANLECFQINPliKDYNGPACAYVTG--PLGGYTANAKGERFIECDYW-----------SGQMMWE 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 351 I-RE-GRGCGPekdhVYLQLHHLPPEQlatrlpgISETAMIF--------------AGVDVTKEPIP-VLPTVHYNMG-- 411
Cdd:PRK08275 287 FyQElQSGNGP----VFLKLDHLAEET-------IQTIETILhtnerpsrgrfhegRGTDYRQQMVEmHISEIGFCSGhs 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 412 --GIPTNYKGQVlkhvngqdqIVPGLYACGEAACasvhganrLGANSLLDLVVFGRACALSIAESCRPGDKVPSIKANAG 489
Cdd:PRK08275 356 asGVWVNEKAET---------TVPGLYAAGDMAS--------VPHNYMLGAFTYGWFAGENAAEYVAGRDLPEVDAAQVE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 490 EESVMNLDKLRFADGsIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDrgmvWNtDLVETLELQ 569
Cdd:PRK08275 419 AERARVLAPLHREDG-LPPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARD----PH-ELMRALEVS 492
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 54607098 570 NLMLCALQTIYGAEARKESRGA--HAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYVDiKTGKVTLEYRPV 644
Cdd:PRK08275 493 SIRDCAEMAARASLFRTESRWGlyHYRVDFPERND-----------------AEWFCHTHLRKD-EDGRMVSFKRPV 551
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
56-646 |
7.41e-15 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 78.04 E-value: 7.41e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 56 PVVDHEFDAVVVGaggaglraafglseAGfnTACLTKLFPT------------------RSHTVaAQG--GINAALGNME 115
Cdd:PRK06854 6 EVVEVDTDILIIG--------------GG--MAGCGAAFEAkewapdlkvlivekanikRSGAV-AQGlsAINAYIGEGE 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 116 --EDnwrwhFYDTVKGsDWLG--DQDAIHYMTEQAPASVVELENYGMPFSRTEDGKiYQRAfG-------GQSLKfgkgg 184
Cdd:PRK06854 69 tpED-----YVRYVRK-DLMGivREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-YVRR-GrwqiminGESYK----- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 185 qahrcCCVADRTGHSLLHTLYGRSlrydtsyfveyFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVIATGG----Yg 260
Cdd:PRK06854 136 -----PIVAEAAKKALGDNVLNRV-----------FITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiY- 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 261 RTYFSCTSAHT------STGDGTAMVTRAG--LPCQDLEFVQFH------PTGIYGAGCliteGCRgeggiLINSQGERF 326
Cdd:PRK06854 199 RPRSPGEGRGRmwyppfNTGSGYAMGIRAGaeMTTFENRFIPLRfkdgygPVGAWFLLF----KAK-----AVNALGEEY 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 327 MERYAPVAKDLASRDVVSR--------SMTLEIREGRgcGPekdhVYLQLHH-LPPEQLATRL--------PGIsetAMI 389
Cdd:PRK06854 270 EAKNAAELKKYVPYADYKPiptclrnyATVEENKAGR--GP----IYMDTEEaLQDKHLESELwedfldmtPGQ---ALL 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 390 FAGVDV--TKEPIPVLPTVHYNMGGiptnYKGQVLKHVNGQDQI--------------VPGLYACGEAACASVH----GA 449
Cdd:PRK06854 341 WAAQNIepEEENSEIMGTEPYIVGS----HSGASGYWVSGPEDWvpeeykwgynrmttVEGLFAAGDVVGGSPHkfssGS 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 450 nrlganslldlVVFGRACALSIAESCRPG-DKVPSIKANAGEESVMNLDK-----LRFADGS---------IRTSELRLN 514
Cdd:PRK06854 417 -----------FAEGRIAAKAAVRYILDNkDEKPEIDDDQIEELKKEIYApleryEEFKDYStdpdvnpnyISPEQLEER 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 515 MQKSMQNHAAVFRV-----GSVLQEGCEKISQLYGDLKHLKTFDrgmvwNTDLVETLELQNLMLCALQTIYGAEARKESR 589
Cdd:PRK06854 486 LQKIMDEYAGGISTnyttnEKLLEIALELLEMLEEDSEKLAARD-----LHELMRCWELKHRLLVAEAHIRHLLFRKETR 560
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 54607098 590 --GAHAREDYKVRVDeydyskpiqgqqkkpfgEHWRKHTLSYVDIKTGKVTLEYRPVID 646
Cdd:PRK06854 561 wpGYYERADYPGKDD-----------------ENWKCFVNSRYDPGTGEWTIRKLPYYQ 602
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
81-602 |
1.93e-10 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 64.10 E-value: 1.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 81 SEAGFNTACLTKLFPTRSHTVA-AQGGINAAL--GNMEEDNWrwhFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYG 157
Cdd:PRK13800 33 AEHGANVLLLEKAHVRHSGALAmGMDGVNNAVipGKAEPEDY---VAEITRANDGIVNQRTVYQTATRGFAMVQRLERYG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 158 MPFSRTEDGKIYQRAF---GGQSLKFGKGGQAHRcccvadrtghSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGV 234
Cdd:PRK13800 110 VKFEKDEHGEYAVRRVhrsGSYVLPMPEGKDVKK----------ALYRVLRQRSMRERIRIENRLMPVRVLTEGGRAVGA 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 235 IALCIEDGSIHRIRAKNTVIATGGYGR-----------TYFSCTSAhtstGDGTAMVTRAGLPCQDLEFVQFHP--TGIY 301
Cdd:PRK13800 180 AALNTRTGEFVTVGAKAVILATGPCGRlglpasgylygTYENPTNA----GDGYSMAYHAGAELSGIECFQINPliKDYN 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 302 GAGCLITegCRGEGGILINSQGERFmeryapVAKDLASRDVVSRsMTLEIREGRgcGPekdhVYLQLHHLPPEQLATrLP 381
Cdd:PRK13800 256 GPACAYV--ANPFGGYQVNAQGERF------VDSDYWSGQMMAE-VKREIESAR--GP----IYLKVSHLPEETLSA-LE 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 382 GISETamifagvdvTKEpiPVLPTVHYNMGgipTNYK---------------GQVLKHVNGQDQ---IVPGLYACGEAAC 443
Cdd:PRK13800 320 SILHT---------TER--PTRGTFHANRG---HDYRthdiemhiseiglcsGHSASGVWVDEHartTVPGLYAAGDLAC 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 444 asVHGANRLGANSLLDLVvfGRACALSIAESCRPGDkVPSIKANAGEESVMNldKLRFADGSIRtSELRLNMQKSMQNHA 523
Cdd:PRK13800 386 --VPHNYMIGAFVFGDLA--GAHAAGTLAEVPAPGE-LPADQLAEAHELIYR--PLRHPDGPPQ-PQVEYKLRRFVNDYV 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 524 AVFRVGSVLQEGCEKISQLYGDLKhlktfdrGMVWNT--DLVETLELQNLMLCALQTIYGAEARKESRGA--HAREDYKV 599
Cdd:PRK13800 458 APPKTAAKLSIAVETFERMAAEIA-------GMGARTphELMRCAEVSFIRDCAEMAARSSLTRTESRWGlyHDRADLPE 530
|
...
gi 54607098 600 RVD 602
Cdd:PRK13800 531 RDD 533
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
197-482 |
5.44e-07 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 52.83 E-value: 5.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 197 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAlcIEDGSIHRIRAKNTVI-ATGGYGR------------TY 263
Cdd:PRK12844 207 GAALIGRMLEAALAAGVPLWTNTPLTELIVEDGRVVGVVV--VRDGREVLIRARRGVLlASGGFGHnaemrkryqpqpNS 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 264 FSCTSAHTS-TGDG--TAMVTRAGLPCQDLEF---VQFHPTGIYGAGCLITEGCRgEGGILINSQGERFMER---YAPVA 334
Cdd:PRK12844 285 GDWTNANPGdTGEVieAAMRLGAALDLMDEAWwvpGAPLPNGGPRPYMHNSERSK-PGSIIVDRAGRRFVNEagsYMEVG 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 335 KDLASRDVVSRSMTLEIREGR---------GCGPEK--DHVYLQ----------LHHLPPEQLAT---RLPGISETamif 390
Cdd:PRK12844 364 RAMYAQDAVPAWMIMDSRYRKrylfgtippGPTPQEwlDSGYMKradtieelagKTGIDPAGLAAtveRFNGFAAT---- 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 391 aGVDV----------------TKEPIPVLPTV----HYNM----------GGIPTNYKGQVLKHvngQDQIVPGLYACGE 440
Cdd:PRK12844 440 -GTDPdfhrgesaydryygdpTNKPNPSLGPLdkppFYAVrmvpgdvgtsGGLLTDEHARVLRE---DGSVIPGLYATGN 515
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 54607098 441 AAcASVHGANRLGAN-SLLDLVVFGRACALSIAEScRPGDKVP 482
Cdd:PRK12844 516 CT-ASVMGRTYPGAGaSIGNSFVFGYIAALHAAGA-RSADPPP 556
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
410-474 |
4.10e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 43.35 E-value: 4.10e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 54607098 410 MGGIPTNYKGQVLkhvnGQD-QIVPGLYACGEAA---CASVHGANRLGANSLLDLVVFGRACALSIAES 474
Cdd:PRK12834 485 LGGLETDLDSRVL----GADgTPLPGLYAAGEAAgfgGGGVHGYNALEGTFLGGCIFSGRAAGRAAARA 549
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
223-474 |
4.57e-04 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 43.49 E-value: 4.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 223 DLLMENGECRGVIALciEDGSIHRIRAKNTVI-ATGG----------YGRTYFSC---TSAHTSTGDGTAMVTRAGlpcQ 288
Cdd:PRK07843 233 DLYVEDGRVTGVHAA--ESGEPQLIRARRGVIlASGGfehneqmrakYQRAPIGTewtVGAKANTGDGILAGEKLG---A 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 289 DLEFVQfhpTGIYGAGCLITEG---CRGE----GGILINSQGERFMERYAPVAkdlasrDVVSRSMTLEIREGRGCGPE- 360
Cdd:PRK07843 308 ALDLMD---DAWWGPTIPLPGGpwfALSErnlpGSIIVNMSGKRFMNESAPYV------EAVHHMYGGEYGQGPGPGENi 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 361 ----------KDHvYLqLHHLPPEQ--------------------LATR--LPGISETAMI-----FA--GV-------- 393
Cdd:PRK07843 379 pawlvfdqryRDR-YL-FAGLQPRQpipsrwlesgvivkadtlaeLAAKigVPADALTATVqrfngFArsGVdedfhrge 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54607098 394 --------DVTKEPIPVL------PTVHYNM--------GGIPTNYKGQVLKHvngQDQIVPGLYACGEAAcASVHGANR 451
Cdd:PRK07843 457 saydryygDPTNKPNPNLgelshaPFYAAKMvpgdlgtkGGLRTDVRGRVLRD---DGSVIEGLYAAGNVS-APVMGHTY 532
|
330 340
....*....|....*....|....
gi 54607098 452 LGANSLLD-LVVFGRACALSIAES 474
Cdd:PRK07843 533 AGPGATIGpAMTFGYLAALDIAAQ 556
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
410-473 |
9.02e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.47 E-value: 9.02e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 54607098 410 MGGIPTNYKGQVLkhvNGQDQIVPGLYACGEAA---CASVHGANRL-GanSLLDLVVF-GRACALSIAE 473
Cdd:COG3573 486 LGGLQTDLDSRVL---DADGQPIPGLYAAGEAAgfgGGGVHGYRALeG--TFLGGCIFsGRAAGRAIAA 549
|
|
| |
