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Conserved domains on  [gi|254675126|ref|NP_082372|]
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CRACD-like protein isoform 2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4592 pfam15262
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ...
 145-243 4.10e-24

Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.


:

Pssm-ID: 464602 [Multi-domain]  Cd Length: 127  Bit Score: 98.64  E-value: 4.10e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   145 KRAEETGMSSEDDGLPRSPPEMSLLHDVGPGTTIKilvSSSRPQSPDHMSDASI------------SSRTL----DGSLA 208
Cdd:pfam15262   15 KRADDAGASSEDDGLPRSPPEISLLHEILLSTESK---SSDPPQHLSSLSLAGTgseeeeqstpvkSSRPKspfsPSGTI 91

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 254675126   209 PVVDFSHPPEFSSCLDNSAAKHKLLVKPRNQRSSK 243
Cdd:pfam15262   92 EPINFDAPPQALACLDNSAAKHKLSVKPKNQRASR 126
PTZ00436 super family cl33183
60S ribosomal protein L19-like protein; Provisional
 500-628 1.10e-12

60S ribosomal protein L19-like protein; Provisional


The actual alignment was detected with superfamily member PTZ00436:

Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 71.13  E-value: 1.10e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  500 APPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPP 579
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAP 299

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 254675126  580 KKIMAPPERDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPP 628
Cdd:PTZ00436  300 AKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
 430-818 8.42e-09

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 60.18  E-value: 8.42e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  430 AFSERHMAFPGGGSIPPEGNTTPHKGVMEPPERDMSPSKDNMAPPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSPP 509
Cdd:PHA03307   16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  510 EGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPP----EGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAP 585
Cdd:PHA03307   96 APASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMlrpvGSPGPPPAASPPAAGASPAAVASDAASSRQAALP 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  586 peRDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPPET 665
Cdd:PHA03307  176 --LSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPEN 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  666 ITDTNLETPSDTERQDQSvQKEEELTLVVVPRPEGVGTESSTAPAPSPPVPKSCLK-----HKALVTSGSPAESPLKEPG 740
Cdd:PHA03307  254 ECPLPRPAPITLPTRIWE-ASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPApssprASSSSSSSRESSSSSTSSS 332

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  741 PAVQDKAVVPPARPRPTQAATSGGPERTALGRKNER---SAEPQRSSVKRFSVTSSRARARVSGSRLPEYSAHVPAGGRA 817
Cdd:PHA03307  333 SESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRprpSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRP 412


                  .
gi 254675126  818 P 818
Cdd:PHA03307  413 R 413
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 695-1039 1.88e-03

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.67  E-value: 1.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  695 VPRPEGVGTESSTAPAPSPPVPKSCLKHKALVTSGSPAESPLKEPGPAVQDKAVVPPARPRPTQAATSGGPERTALGRKN 774
Cdd:PRK07764  432 APAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  775 ERSAEPQ-RSSVKRFSVTSSRAR---ARVSGSRLPEYS-AHVPAG--------GRAPLLRS------GLAWKSEAALDdl 835
Cdd:PRK07764  512 LRERWPEiLAAVPKRSRKTWAILlpeATVLGVRGDTLVlGFSTGGlarrfaspGNAEVLVTalaeelGGDWQVEAVVG-- 589

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  836 qvlpkpqdrktmGGDPQNSGDVGAGQAGPGKSPQEAEPCASSVQEPANGEDQSPFPVKLRSTSLSLKYRDSSAQEAKAIK 915
Cdd:PRK07764  590 ------------PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHV 657

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  916 RYSAEVRLEKGGLALLPKDEQSHVGAAPALRGSRSPNGQGkgkTRSPEQPGTKPPLPRKPLLPSLTLPYPPTGLDTSPGE 995
Cdd:PRK07764  658 AVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAA---PAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPA 734

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 254675126  996 SERLIPviLPPEPRKEKLSNQGAEKGQPPAATGPGADGQPTPPW 1039
Cdd:PRK07764  735 ADDPVP--LPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPP 776
 
Name Accession Description Interval E-value
DUF4592 pfam15262
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ...
 145-243 4.10e-24

Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.


Pssm-ID: 464602 [Multi-domain]  Cd Length: 127  Bit Score: 98.64  E-value: 4.10e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   145 KRAEETGMSSEDDGLPRSPPEMSLLHDVGPGTTIKilvSSSRPQSPDHMSDASI------------SSRTL----DGSLA 208
Cdd:pfam15262   15 KRADDAGASSEDDGLPRSPPEISLLHEILLSTESK---SSDPPQHLSSLSLAGTgseeeeqstpvkSSRPKspfsPSGTI 91

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 254675126   209 PVVDFSHPPEFSSCLDNSAAKHKLLVKPRNQRSSK 243
Cdd:pfam15262   92 EPINFDAPPQALACLDNSAAKHKLSVKPKNQRASR 126
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 500-628 1.10e-12

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 71.13  E-value: 1.10e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  500 APPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPP 579
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAP 299

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 254675126  580 KKIMAPPERDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPP 628
Cdd:PTZ00436  300 AKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 430-818 8.42e-09

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 60.18  E-value: 8.42e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  430 AFSERHMAFPGGGSIPPEGNTTPHKGVMEPPERDMSPSKDNMAPPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSPP 509
Cdd:PHA03307   16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  510 EGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPP----EGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAP 585
Cdd:PHA03307   96 APASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMlrpvGSPGPPPAASPPAAGASPAAVASDAASSRQAALP 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  586 peRDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPPET 665
Cdd:PHA03307  176 --LSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPEN 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  666 ITDTNLETPSDTERQDQSvQKEEELTLVVVPRPEGVGTESSTAPAPSPPVPKSCLK-----HKALVTSGSPAESPLKEPG 740
Cdd:PHA03307  254 ECPLPRPAPITLPTRIWE-ASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPApssprASSSSSSSRESSSSSTSSS 332

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  741 PAVQDKAVVPPARPRPTQAATSGGPERTALGRKNER---SAEPQRSSVKRFSVTSSRARARVSGSRLPEYSAHVPAGGRA 817
Cdd:PHA03307  333 SESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRprpSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRP 412


                  .
gi 254675126  818 P 818
Cdd:PHA03307  413 R 413
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 448-773 5.01e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 47.60  E-value: 5.01e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   448 GNTTPHKGVME--PPERDMSPSKDNMAppkrIIAPPERDMLPSEGDVapPKRIMAPPERDMSPPEGDVAPPKKI-----M 520
Cdd:pfam05109  412 ATTTTHKVIFSkaPESTTTSPTLNTTG----FAAPNTTTGLPSSTHV--PTNLTAPASTGPTVSTADVTSPTPAgttsgA 485

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   521 APPERDMSPPE-GDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGdvap 599
Cdd:pfam05109  486 SPVTPSPSPRDnGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPA---- 561

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   600 pkkIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPPEtitdtNLETPSDTER 679
Cdd:pfam05109  562 ---VTTPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPK-----NATSAVTTGQ 633

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   680 QDQSVQKEEELTLvvvpRPegvgteSSTAPAPSPPVPKSCLKHKALVTSGSPAESP-LKEPGPAVQDKAVVPPAR--PRP 756
Cdd:pfam05109  634 HNITSSSTSSMSL----RP------SSISETLSPSTSDNSTSHMPLLTSAHPTGGEnITQVTPASTSTHHVSTSSpaPRP 703

                          330
                   ....*....|....*..
gi 254675126   757 TQAATSGGPERTALGRK 773
Cdd:pfam05109  704 GTTSQASGPGNSSTSTK 720
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 695-1039 1.88e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.67  E-value: 1.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  695 VPRPEGVGTESSTAPAPSPPVPKSCLKHKALVTSGSPAESPLKEPGPAVQDKAVVPPARPRPTQAATSGGPERTALGRKN 774
Cdd:PRK07764  432 APAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  775 ERSAEPQ-RSSVKRFSVTSSRAR---ARVSGSRLPEYS-AHVPAG--------GRAPLLRS------GLAWKSEAALDdl 835
Cdd:PRK07764  512 LRERWPEiLAAVPKRSRKTWAILlpeATVLGVRGDTLVlGFSTGGlarrfaspGNAEVLVTalaeelGGDWQVEAVVG-- 589

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  836 qvlpkpqdrktmGGDPQNSGDVGAGQAGPGKSPQEAEPCASSVQEPANGEDQSPFPVKLRSTSLSLKYRDSSAQEAKAIK 915
Cdd:PRK07764  590 ------------PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHV 657

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  916 RYSAEVRLEKGGLALLPKDEQSHVGAAPALRGSRSPNGQGkgkTRSPEQPGTKPPLPRKPLLPSLTLPYPPTGLDTSPGE 995
Cdd:PRK07764  658 AVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAA---PAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPA 734

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 254675126  996 SERLIPviLPPEPRKEKLSNQGAEKGQPPAATGPGADGQPTPPW 1039
Cdd:PRK07764  735 ADDPVP--LPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPP 776
 
Name Accession Description Interval E-value
DUF4592 pfam15262
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ...
 145-243 4.10e-24

Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.


Pssm-ID: 464602 [Multi-domain]  Cd Length: 127  Bit Score: 98.64  E-value: 4.10e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   145 KRAEETGMSSEDDGLPRSPPEMSLLHDVGPGTTIKilvSSSRPQSPDHMSDASI------------SSRTL----DGSLA 208
Cdd:pfam15262   15 KRADDAGASSEDDGLPRSPPEISLLHEILLSTESK---SSDPPQHLSSLSLAGTgseeeeqstpvkSSRPKspfsPSGTI 91

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 254675126   209 PVVDFSHPPEFSSCLDNSAAKHKLLVKPRNQRSSK 243
Cdd:pfam15262   92 EPINFDAPPQALACLDNSAAKHKLSVKPKNQRASR 126
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 500-628 1.10e-12

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 71.13  E-value: 1.10e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  500 APPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPP 579
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAP 299

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 254675126  580 KKIMAPPERDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPP 628
Cdd:PTZ00436  300 AKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 479-607 1.74e-12

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 70.36  E-value: 1.74e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  479 APPERDMLPSEGDVAPPKRIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPP 558
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAP 299

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 254675126  559 KKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPP 607
Cdd:PTZ00436  300 AKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 493-623 1.94e-12

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 70.36  E-value: 1.94e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  493 APPKRIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPS 572
Cdd:PTZ00436  227 AAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAP 306

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 254675126  573 EGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKR 623
Cdd:PTZ00436  307 AKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPVGKKAGGKK 357
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 472-602 3.36e-12

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 69.59  E-value: 3.36e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  472 APPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPP 551
Cdd:PTZ00436  227 AAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAP 306

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 254675126  552 EGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPPKK 602
Cdd:PTZ00436  307 AKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPVGKKAGGKK 357
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 514-644 9.51e-12

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 68.05  E-value: 9.51e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  514 APPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPP 593
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAP 299

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 254675126  594 EGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKG 644
Cdd:PTZ00436  300 AKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPVG 350
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 521-649 1.31e-10

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 64.59  E-value: 1.31e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  521 APPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPP 600
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAP 299

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 254675126  601 KKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPP 649
Cdd:PTZ00436  300 AKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 514-658 2.48e-10

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 63.82  E-value: 2.48e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  514 APPKKIMAPPERD---MSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDM 590
Cdd:PTZ00436  203 AAAKKAAAPSGKKsakAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAA 282

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 254675126  591 SPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKG 658
Cdd:PTZ00436  283 APPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPVG 350
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 459-581 7.48e-10

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 62.27  E-value: 7.48e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  459 PPERDMSPSKDNMAPPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPK 538
Cdd:PTZ00436  235 PPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPA 314

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 254675126  539 KIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKK 581
Cdd:PTZ00436  315 KAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPVGKKAGGKK 357
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 430-818 8.42e-09

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 60.18  E-value: 8.42e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  430 AFSERHMAFPGGGSIPPEGNTTPHKGVMEPPERDMSPSKDNMAPPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSPP 509
Cdd:PHA03307   16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  510 EGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPP----EGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAP 585
Cdd:PHA03307   96 APASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMlrpvGSPGPPPAASPPAAGASPAAVASDAASSRQAALP 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  586 peRDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPPET 665
Cdd:PHA03307  176 --LSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPEN 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  666 ITDTNLETPSDTERQDQSvQKEEELTLVVVPRPEGVGTESSTAPAPSPPVPKSCLK-----HKALVTSGSPAESPLKEPG 740
Cdd:PHA03307  254 ECPLPRPAPITLPTRIWE-ASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPApssprASSSSSSSRESSSSSTSSS 332

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  741 PAVQDKAVVPPARPRPTQAATSGGPERTALGRKNER---SAEPQRSSVKRFSVTSSRARARVSGSRLPEYSAHVPAGGRA 817
Cdd:PHA03307  333 SESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRprpSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRP 412


                  .
gi 254675126  818 P 818
Cdd:PHA03307  413 R 413
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 542-663 2.09e-08

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 57.65  E-value: 2.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  542 APPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPP 621
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAP 299

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 254675126  622 KRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPP 663
Cdd:PTZ00436  300 AKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPP 341
PHA03247 PHA03247
large tegument protein UL36; Provisional
 282-718 2.31e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.80  E-value: 2.31e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  282 PDARQRDLIPGRRPEFGGPATFLSPGGACARRArlqhsmAVSASMEEGGCPRDEPSS-LPATPEVTEPMVVSVPSLESPS 360
Cdd:PHA03247 2580 PAVTSRARRPDAPPQSARPRAPVDDRGDPRGPA------PPSPLPPDTHAPDPPPPSpSPAANEPDPHPPPTVPPPERPR 2653

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  361 LPESSPNHILHSKSQKEELSPGGLCPLVESTSEEAPcgSGVAETPLSTDVPERDMGPSkegSAPPEGDPAFSERHMAFPG 440
Cdd:PHA03247 2654 DDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAAR--PTVGSLTSLADPPPPPPTPE---PAPHALVSATPLPPGPAAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  441 GGSIPPegnTTPHKGVMEPPERDMSPSKDNMAPPKRIIAPPERDmlpsegdvAPPKRIMAPPERDMSPPEGDVAPPKKIM 520
Cdd:PHA03247 2729 RQASPA---LPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAP--------APPAAPAAGPPRRLTRPAVASLSESRES 2797

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  521 APPERDMSPPEGDVAPPKKIMAP---PERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAP--PKKIMAPPERDMSPPEG 595
Cdd:PHA03247 2798 LPSPWDPADPPAAVLAPAAALPPaasPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPggDVRRRPPSRSPAAKPAA 2877

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  596 DVAPPKKIMAPPErdLSPSEGDVAPPKRIMAPPERDMSPfkgdmAPPKGIMEPPNRDTSLPKgdtPPPETITDTNLETPS 675
Cdd:PHA03247 2878 PARPPVRRLARPA--VSRSTESFALPPDQPERPPQPQAP-----PPPQPQPQPPPPPQPQPP---PPPPPRPQPPLAPTT 2947

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 254675126  676 DTERQDQSVQKEEELTL-VVVPRPEGVGTESSTAPAPSPPVPKS 718
Cdd:PHA03247 2948 DPAGAGEPSGAVPQPWLgALVPGRVAVPRFRVPQPAPSREAPAS 2991
PHA03247 PHA03247
large tegument protein UL36; Provisional
 439-891 8.81e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.87  E-value: 8.81e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  439 PGGGSIPPEGNTTPHKGVMEPPERDMSPSKDNMAPPKRIIAPPERDMLP---------------SEGDVAPPKRIMAPP- 502
Cdd:PHA03247 2483 PAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPrmltwirgleelasdDAGDPPPPLPPAAPPa 2562

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  503 --ERDMSPPEGDVAPPKKIM--------APPERdmSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPkkimAPPERDMSPS 572
Cdd:PHA03247 2563 apDRSVPPPRPAPRPSEPAVtsrarrpdAPPQS--ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP----PPPSPSPAAN 2636

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  573 EGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAP--PERDLSPSEGdvapPKRIMAPPERDMSPFKGDMAPPKGIMEPPN 650
Cdd:PHA03247 2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLgrAAQASSPPQR----PRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  651 RDTSLPKGDTPPPETITDTNLETPSDTERQDQSVQKEEELTLVVVPRPEGVGTESSTAPAPSPPVPKSCLKHKALVTSGS 730
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLS 2792

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  731 PAESPLKEPGPAVQDKAVVPPARPRPTQAATSGGPERTALGRKNERSAEPQRSSVKRFSVTSSRARARVSGSRLPEYS-A 809
Cdd:PHA03247 2793 ESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSpA 2872

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  810 HVPAGGRAPLLRSglaWKSEAALDDLQVLPKPQDRKTMGGDPQnsgdvgaGQAGPGKSPQEAEPCASSVQEPANGEDQSP 889
Cdd:PHA03247 2873 AKPAAPARPPVRR---LARPAVSRSTESFALPPDQPERPPQPQ-------APPPPQPQPQPPPPPQPQPPPPPPPRPQPP 2942


                  ..
gi 254675126  890 FP 891
Cdd:PHA03247 2943 LA 2944
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 411-544 3.76e-06

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 50.72  E-value: 3.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  411 PERDMGPSKEGSAPPEGDPAFSERHMAFPGGGSIPPEGNTTPHKGVMEPPERDMSPSKDNMAPPKRIIAPPERdmlpseg 490
Cdd:PTZ00436  222 PAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAK------- 294

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 254675126  491 DVAPPKRIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPP 544
Cdd:PTZ00436  295 AAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PHA03247 PHA03247
large tegument protein UL36; Provisional
 547-1062 4.21e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.48  E-value: 4.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  547 DMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPerdlspseGDVAPPKRI-- 624
Cdd:PHA03247 2465 SLSLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPV--------GEPVHPRMLtw 2536

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  625 MAPPERDMSPFKGDMAPP-KGIMEPPNRDTSLPKGDTPP-PETITDTNLETPSDTERQDQSvqkeeeltlvvvPRPEGVG 702
Cdd:PHA03247 2537 IRGLEELASDDAGDPPPPlPPAAPPAAPDRSVPPPRPAPrPSEPAVTSRARRPDAPPQSAR------------PRAPVDD 2604

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  703 TESSTAPAPSPPVPKSCLKHKALVTSGSPAESPLKEPGPAvqdkAVVPPARPRPTQAATSGGPER--TALGRKNERSAEP 780
Cdd:PHA03247 2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPP----TVPPPERPRDDPAPGRVSRPRraRRLGRAAQASSPP 2680

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  781 Q--RSSVKRFSVTSSRARARVSGSRLPEYSAHVPAGGRAPLLRSGLAWKSEAALDDLQVLPKPqdrktmggdPQNSGDVG 858
Cdd:PHA03247 2681 QrpRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPA---------VPAGPATP 2751

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  859 AGQAGPGKSPQEAEPCASSV-QEPANGEDQSPFPVKLRSTSLSLKY----RDSSAQEAKAIKRYSAEVRLEKGGLALLPK 933
Cdd:PHA03247 2752 GGPARPARPPTTAGPPAPAPpAAPAAGPPRRLTRPAVASLSESRESlpspWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  934 DEQSHVGAAP---------ALRGSRSPNG--QGKGKTRSPEQPGTKPPLPRKPLLPSLTLPYPPTGLDTSPGESERLIPV 1002
Cdd:PHA03247 2832 TSAQPTAPPPppgppppslPLGGSVAPGGdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQP 2911

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126 1003 ILPPEPRkEKLSNQGAEKGQPPAATGPGADGQPTPPWITMARQKRRGAPDLPVNQEEKPG 1062
Cdd:PHA03247 2912 QAPPPPQ-PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPG 2970
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 556-665 2.26e-05

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 48.02  E-value: 2.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  556 APPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPErdmspf 635
Cdd:PTZ00436  220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPA------ 293

                          90       100       110
                  ....*....|....*....|....*....|
gi 254675126  636 KGDMAPPKGIMEPPNRDTSLPKGDTPPPET 665
Cdd:PTZ00436  294 KAAAAPAKAAAAPAKAAAAPAKAAAPPAKA 323
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 278-663 4.21e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.86  E-value: 4.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  278 MEETPDARQRDLIPGRRPEFGGPATFLSPGGACARRARLQhSMAVSASMEEGGCPRDEPSSLPATPEVTEPMVVSVPSLE 357
Cdd:PHA03307   67 PPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSP-TPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPG 145

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  358 SPSLPESSPNHILHSKSQKEELSPGGLCPLVESTSEEAPCGSGVAET-PLSTDVPERDMGPSKEGS--APPEGDPAfser 434
Cdd:PHA03307  146 PPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEpPPSTPPAAASPRPPRRSSpiSASASSPA---- 221

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  435 hmAFPGGGSIPPEGNTTPHKGVMEPPERDMSPSKDNMAPPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSPPEGDVA 514
Cdd:PHA03307  222 --PAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPS 299

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  515 PPKKiMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPkkimAPPERDMSPSEGDVAPPkkimAPPERDMSPPE 594
Cdd:PHA03307  300 PSSP-GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVS----PGPSPSRSPSPSRPPPP----ADPSSPRKRPR 370

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 254675126  595 GDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPER------DMSPFKGDMAPPKGIMEPPNRDTS---LPKGDTPPP 663
Cdd:PHA03307  371 PSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRfpagrpRPSPLDAGAASGAFYARYPLLTPSgepWPGSPPPPP 448
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 448-773 5.01e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 47.60  E-value: 5.01e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   448 GNTTPHKGVME--PPERDMSPSKDNMAppkrIIAPPERDMLPSEGDVapPKRIMAPPERDMSPPEGDVAPPKKI-----M 520
Cdd:pfam05109  412 ATTTTHKVIFSkaPESTTTSPTLNTTG----FAAPNTTTGLPSSTHV--PTNLTAPASTGPTVSTADVTSPTPAgttsgA 485

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   521 APPERDMSPPE-GDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGdvap 599
Cdd:pfam05109  486 SPVTPSPSPRDnGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPA---- 561

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   600 pkkIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPPEtitdtNLETPSDTER 679
Cdd:pfam05109  562 ---VTTPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPK-----NATSAVTTGQ 633

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126   680 QDQSVQKEEELTLvvvpRPegvgteSSTAPAPSPPVPKSCLKHKALVTSGSPAESP-LKEPGPAVQDKAVVPPAR--PRP 756
Cdd:pfam05109  634 HNITSSSTSSMSL----RP------SSISETLSPSTSDNSTSHMPLLTSAHPTGGEnITQVTPASTSTHHVSTSSpaPRP 703

                          330
                   ....*....|....*..
gi 254675126   757 TQAATSGGPERTALGRK 773
Cdd:pfam05109  704 GTTSQASGPGNSSTSTK 720
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 353-826 6.10e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.47  E-value: 6.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  353 VPSLESPSLPESSPNHILHSKSQKEELSPGGLCPLVESTSEEAPCG-SGVAETPLSTDVPERDMGPSKEGSAPPEGDPA- 430
Cdd:PHA03307   18 GEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDrFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAp 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  431 FSERHMAFPGGGSIPPEgnttphkgvmEPPERdmSPSKDNMAPPKRIIAPPERDMLPSEGdvAPPKRIMAPPERDMSPPE 510
Cdd:PHA03307   98 ASPAREGSPTPPGPSSP----------DPPPP--TPPPASPPPSPAPDLSEMLRPVGSPG--PPPAASPPAAGASPAAVA 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  511 GDVAPPKKIMAPpeRDMSPPEGDVAPPKKIMAPPERDmsPPEGDVAPPKKimaPPERDMSPSEGDVAPPKKIMAPPER-- 588
Cdd:PHA03307  164 SDAASSRQAALP--LSSPEETARAPSSPPAEPPPSTP--PAAASPRPPRR---SSPISASASSPAPAPGRSAADDAGAss 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  589 -DMSPPEgdvaPPKKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPPETIT 667
Cdd:PHA03307  237 sDSSSSE----SSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSP 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  668 DTNLETPSDTERQDQSVQKEEEltlvvVPRPEGVGTESSTAPAPSPPVPksclkhkalvtSGSPAESPLKEPGpavqdka 747
Cdd:PHA03307  313 RASSSSSSSRESSSSSTSSSSE-----SSRGAAVSPGPSPSRSPSPSRP-----------PPPADPSSPRKRP------- 369

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 254675126  748 vvPPARPRPTQAATSGGPERTALGRKNERSAEPQRSSVKRfsvtsSRARARVSGSRLPEYSAHVPAGGRaPLLRSGLAW 826
Cdd:PHA03307  370 --RPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRF-----PAGRPRPSPLDAGAASGAFYARYP-LLTPSGEPW 440
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 386-523 1.06e-04

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 46.10  E-value: 1.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  386 PLVESTSEEAPCGSGVAETPLSTDVPERDMGPSKEGSAPPEGDPAFSERHMAFPGGGSIPPEGNTTPHKGVMEPPERDMS 465
Cdd:PTZ00436  211 PSGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAA 290

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 254675126  466 PSKDNMAPPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSPPEGDVAPPKKIMAPP 523
Cdd:PTZ00436  291 PPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAP 348
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 487-618 3.10e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.09  E-value: 3.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  487 PSEGDVAPPKRIMAPPERDmSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPkkimAPPERDMSPPEGD---VAPPKKIMA 563
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARP-EAAAPAAAPVAQAAAAPAPAAAPAAAASAPA----APPAAAPPAPVAApaaAAPAAAPAA 440

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 254675126  564 PPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDLSPSE-GDV 618
Cdd:PRK14951  441 APAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEeGDV 496
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
528-844 3.84e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 44.84  E-value: 3.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  528 SPPEGDVAP--PKKIMAPPERDMSPPEGDVAPPKK-IMAPPERDMSPSEGDVAPPKKIMAPPERDMSPPEGDVAPpkkim 604
Cdd:PRK07003  366 GAPGGGVPArvAGAVPAPGARAAAAVGASAVPAVTaVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGD----- 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  605 apperdlSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPkgimePPNRDTSLPKGDTPPPETITDtnlETPSDTERQDQSV 684
Cdd:PRK07003  441 -------DAADGDAPVPAKANARASADSRCDERDAQPP-----ADSGSASAPASDAPPDAAFEP---APRAAAPSAATPA 505

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  685 QKEEELTLVVVPRPEGVGTESSTAPAPSPPVPKS---------------CLKHKALVTSGSPAESPLKEPGPAVQDKAVV 749
Cdd:PRK07003  506 AVPDARAPAAASREDAPAAAAPPAPEARPPTPAAaapaaraggaaaaldVLRNAGMRVSSDRGARAAAAAKPAAAPAAAP 585

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  750 PPARPRP-TQAATSGGPERTALGRKNERSAEPQRSSvkrfSVTSSRARARVSGSRLPEYSA----HVPAGGRAPLLRSGL 824
Cdd:PRK07003  586 KPAAPRVaVQVPTPRARAATGDAPPNGAARAEQAAE----SRGAPPPWEDIPPDDYVPLSAdegfGGPDDGFVPVFDSGP 661

                         330       340
                  ....*....|....*....|
gi 254675126  825 awkseaalDDLQVLPKPQDR 844
Cdd:PRK07003  662 --------DDVRVAPKPADA 673
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
434-656 5.17e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.10  E-value: 5.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  434 RHMAFPGGGSippEGNTTPHKGVMEPPERDMSPSkdnmAPPKRIIAPPERD--MLPSEGDVAPPKRIMAPPERDMSPPEG 511
Cdd:PRK12323  359 RMLAFRPGQS---GGGAGPATAAAAPVAQPAPAA----AAPAAAAPAPAAPpaAPAAAPAAAAAARAVAAAPARRSPAPE 431

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  512 DVAPPKKimAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMS 591
Cdd:PRK12323  432 ALAAARQ--ASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASP 509

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 254675126  592 PPEGDVAPPKKIMAPPERDLSPSEGDVAPPKRIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLP 656
Cdd:PRK12323  510 APAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
697-901 5.54e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.10  E-value: 5.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  697 RPEGVGTESSTAPAPSPPVPKSCLKHKALVTSGSPAESPLKEPGPAVQDKAVVPPARPRPTQAATSGGPERTALGRKNER 776
Cdd:PRK12323  364 RPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARG 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  777 SAEPQRSSVKRFSVTSSRARARVSGSRLPEYSAHVPAGGRAPLLRSGLAWKSEAALDDLQVL-----PKPQDRKTMGGDP 851
Cdd:PRK12323  444 PGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEfaspaPAQPDAAPAGWVA 523

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 254675126  852 QNSGDVGAGQAGPGKSPQEAEPCASSVQEPANGEDQSPFPVKLRSTSLSL 901
Cdd:PRK12323  524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGL 573
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 434-576 1.47e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 42.78  E-value: 1.47e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  434 RHMAF-PGGG--SIPPEGNTTPHKGVMEPPerDMSPSKDNMAPPKRIIAPPERDMLPsegdVAPPKRIMAPPErdmSPPE 510
Cdd:PRK14951  360 RLLAFkPAAAaeAAAPAEKKTPARPEAAAP--AAAPVAQAAAAPAPAAAPAAAASAP----AAPPAAAPPAPV---AAPA 430

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 254675126  511 GDvAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSE-GDV 576
Cdd:PRK14951  431 AA-APAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEeGDV 496
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
472-678 1.54e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.56  E-value: 1.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  472 APPKRIIAPPERDMLPSegdVAPPKRIMAPPERDMSPPegdvAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPP 551
Cdd:PRK12323  372 AGPATAAAAPVAQPAPA---AAAPAAAAPAPAAPPAAP----AAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGP 444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  552 EGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSP-----PEGDVAPPKKIMAPPERDLSPSEGDVAPP----K 622
Cdd:PRK12323  445 GGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPaaapaPADDDPPPWEELPPEFASPAPAQPDAAPAgwvaE 524

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 254675126  623 RIMAPPERDMSPFKGDMAPPKGIMEPPNRDTSLPKGDTPPPETITDTNLETPSDTE 678
Cdd:PRK12323  525 SIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD 580
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
434-623 1.70e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.53  E-value: 1.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  434 RHMAF---PGGGSIPPEGN-TTPHKGVMEP-PERDMSPSKDNMAPPKRIIAPPERDMLPSEGDVAPPKRIMAPPERDMSP 508
Cdd:PRK07003  354 RMLAFepaVTGGGAPGGGVpARVAGAVPAPgARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPP 433

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  509 PEGDVAPPKKIMAPPERdmSPPEGDVAPPKKIMAPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGDVAPP-KKIMAPPE 587
Cdd:PRK07003  434 ATADRGDDAADGDAPVP--AKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAtPAAVPDAR 511

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 254675126  588 RDMSPPEGDVAPPKKimAPPERDLSPSEGDVAPPKR 623
Cdd:PRK07003  512 APAAASREDAPAAAA--PPAPEARPPTPAAAAPAAR 545
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 695-1039 1.88e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.67  E-value: 1.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  695 VPRPEGVGTESSTAPAPSPPVPKSCLKHKALVTSGSPAESPLKEPGPAVQDKAVVPPARPRPTQAATSGGPERTALGRKN 774
Cdd:PRK07764  432 APAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  775 ERSAEPQ-RSSVKRFSVTSSRAR---ARVSGSRLPEYS-AHVPAG--------GRAPLLRS------GLAWKSEAALDdl 835
Cdd:PRK07764  512 LRERWPEiLAAVPKRSRKTWAILlpeATVLGVRGDTLVlGFSTGGlarrfaspGNAEVLVTalaeelGGDWQVEAVVG-- 589

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  836 qvlpkpqdrktmGGDPQNSGDVGAGQAGPGKSPQEAEPCASSVQEPANGEDQSPFPVKLRSTSLSLKYRDSSAQEAKAIK 915
Cdd:PRK07764  590 ------------PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHV 657

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  916 RYSAEVRLEKGGLALLPKDEQSHVGAAPALRGSRSPNGQGkgkTRSPEQPGTKPPLPRKPLLPSLTLPYPPTGLDTSPGE 995
Cdd:PRK07764  658 AVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAA---PAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPA 734

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 254675126  996 SERLIPviLPPEPRKEKLSNQGAEKGQPPAATGPGADGQPTPPW 1039
Cdd:PRK07764  735 ADDPVP--LPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPP 776
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 471-597 5.83e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.85  E-value: 5.83e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  471 MAPPKRIIAPPerdmlPSEGDVAPPKRIMAPPERDMSPPEGDVAPPkkimAPPERDMSPPEGD---VAPPKKIMAPPERD 547
Cdd:PRK14951  375 PAEKKTPARPE-----AAAPAAAPVAQAAAAPAPAAAPAAAASAPA----APPAAAPPAPVAApaaAAPAAAPAAAPAAV 445

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 254675126  548 MSPPEGDVAPPKKIMAPPERDMSPSEGDVAPPKKIMAPPERDMSP-PEGDV 597
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPtEEGDV 496
PHA03321 PHA03321
tegument protein VP11/12; Provisional
 522-756 8.29e-03

tegument protein VP11/12; Provisional


Pssm-ID: 223041 [Multi-domain]  Cd Length: 694  Bit Score: 40.33  E-value: 8.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  522 PPERDMSPPEGDVAPPkkimaPPERDMSPPEGDVAPPKKIMAPPERDMSPSEGD-------VAPPKKIMAPPERDMSPPE 594
Cdd:PHA03321  430 PPGAPAPRRDNDPPPP-----PRARPGSTPACARRARAQRARDAGPEYVDPLGAlrrlpagAAPPPEPAAAPSPATYYTR 504

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  595 GDVAPPKkimaPPERDLSPSE--GDVAPPKRimAPPERDMSPFKgdmaPPKGIMEPPNRDTSLPKGDTPPPETITDTN-- 670
Cdd:PHA03321  505 MGGGPPR----LPPRNRATETlrPDWGPPAA--APPEQMEDPYL----EPDDDRFDRRDGAAAAATSHPREAPAPDDDpi 574

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  671 LETPSDTERQDQSVQKEEELTLVVVPRPEGVGTESSTAPAPSPPvpksclkhkaLVTSGSP----AESPLKEPGPAVQDK 746
Cdd:PHA03321  575 YEGVSDSEEPVYEEIPTPRVYQNPLPRPMEGAGEPPDLDAPTSP----------WVEEENPiygwGDSPLFSPPPAARFP 644

                         250
                  ....*....|
gi 254675126  747 AVVPPARPRP 756
Cdd:PHA03321  645 PPDPALSPEP 654
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 472-668 8.40e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 40.46  E-value: 8.40e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  472 APPKRIIAPPERDMLPSEGDVAPpkrIMAPPERDMsPPEGDVAPPKKIMA----PPERDMSPPEGDVAPPKKIMAPPERD 547
Cdd:PRK08691  384 TAEKETAAKKPQPRPEAETAQTP---VQTASAAAM-PSEGKTAGPVSNQEnndvPPWEDAPDEAQTAAGTAQTSAKSIQT 459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675126  548 MS----PPEGDVAppKKIMAPPERDMSPSEgdVAPPKKIMAPPERDMSPPEG----DVAPPKKIMAPPERDLSPSEG-DV 618
Cdd:PRK08691  460 ASeaetPPENQVS--KNKAADNETDAPLSE--VPSENPIQATPNDEAVETETfaheAPAEPFYGYGFPDNDCPPEDGaEI 535

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 254675126  619 APPKRIMAPPERDMSPFKGDMAPPKGIMEPPnrdtsLPkgDTPPPETITD 668
Cdd:PRK08691  536 PPPDWEHAAPADTAGGGADEEAEAGGIGGNN-----TP--SAPPPEFSTE 578
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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