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Conserved domains on  [gi|58037485|ref|NP_084138|]
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calcium channel flower homolog isoform 1 [Mus musculus]

Protein Classification

Tvp18 family protein( domain architecture ID 10660845)

Tvp18 family protein such as Tvp18 Golgi membrane proteins that are involved in vesicular trafficking and the calcium channel flower proteins, which form calcium channels that regulate synaptic endocytosis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Cg6151-P smart01077
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 34-142 1.48e-43

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteristic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


:

Pssm-ID: 198145  Cd Length: 111  Bit Score: 140.09  E-value: 1.48e-43
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58037485     34 GVLGAVSCAISGLFNCVTIHPLNIAAGVWMIMNAFILLLCEAPFCCQFVEFANTVAEKVDRLRS-WQKAVFYCGMAIVPI 112
Cdd:smart01077   1 GILGIFLCIALGIANIFHFSVVCIVFGILMIVQGFVLLFIEAPFLLKICPFSDKFAEFIDKFDTnWQRAAFYCGMAIVPI 80

                           90       100       110
                   ....*....|....*....|....*....|.
gi 58037485    113 VMSLTLTTLLGNAIAFA-TGVLYGLSALGKK 142
Cdd:smart01077  81 LSCIMLTSLLGVAIFFAiTGVCYGLAALGKQ 111
 
Name Accession Description Interval E-value
Cg6151-P smart01077
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 34-142 1.48e-43

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteristic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 198145  Cd Length: 111  Bit Score: 140.09  E-value: 1.48e-43
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58037485     34 GVLGAVSCAISGLFNCVTIHPLNIAAGVWMIMNAFILLLCEAPFCCQFVEFANTVAEKVDRLRS-WQKAVFYCGMAIVPI 112
Cdd:smart01077   1 GILGIFLCIALGIANIFHFSVVCIVFGILMIVQGFVLLFIEAPFLLKICPFSDKFAEFIDKFDTnWQRAAFYCGMAIVPI 80

                           90       100       110
                   ....*....|....*....|....*....|.
gi 58037485    113 VMSLTLTTLLGNAIAFA-TGVLYGLSALGKK 142
Cdd:smart01077  81 LSCIMLTSLLGVAIFFAiTGVCYGLAALGKQ 111
Cg6151-P pfam10233
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 33-142 1.77e-32

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteriztic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 431157  Cd Length: 113  Bit Score: 111.85  E-value: 1.77e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58037485    33 AGVLGAVSCAISGLFNCVTIHPLNIAAGVWMIMNAFILLLCEAPFCCQFVEFANTVAEKVDRL-RSWQKAVFYCGMAIVP 111
Cdd:pfam10233   1 LGILSIILCIALGIANIFTFSVVCIIFGILCIVSGFIVLFIEVPFLLRICPTSDKFDAFIRKFeTNWMRAAFYLVMAVVQ 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 58037485   112 IVM--SLTLTTLLGNAIAFATGVLYGLSALGKK 142
Cdd:pfam10233  81 WLSlcVFATSLIAGAVLLFITGVCYGLAALGKQ 113
 
Name Accession Description Interval E-value
Cg6151-P smart01077
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 34-142 1.48e-43

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteristic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 198145  Cd Length: 111  Bit Score: 140.09  E-value: 1.48e-43
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58037485     34 GVLGAVSCAISGLFNCVTIHPLNIAAGVWMIMNAFILLLCEAPFCCQFVEFANTVAEKVDRLRS-WQKAVFYCGMAIVPI 112
Cdd:smart01077   1 GILGIFLCIALGIANIFHFSVVCIVFGILMIVQGFVLLFIEAPFLLKICPFSDKFAEFIDKFDTnWQRAAFYCGMAIVPI 80

                           90       100       110
                   ....*....|....*....|....*....|.
gi 58037485    113 VMSLTLTTLLGNAIAFA-TGVLYGLSALGKK 142
Cdd:smart01077  81 LSCIMLTSLLGVAIFFAiTGVCYGLAALGKQ 111
Cg6151-P pfam10233
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 33-142 1.77e-32

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteriztic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 431157  Cd Length: 113  Bit Score: 111.85  E-value: 1.77e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58037485    33 AGVLGAVSCAISGLFNCVTIHPLNIAAGVWMIMNAFILLLCEAPFCCQFVEFANTVAEKVDRL-RSWQKAVFYCGMAIVP 111
Cdd:pfam10233   1 LGILSIILCIALGIANIFTFSVVCIIFGILCIVSGFIVLFIEVPFLLRICPTSDKFDAFIRKFeTNWMRAAFYLVMAVVQ 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 58037485   112 IVM--SLTLTTLLGNAIAFATGVLYGLSALGKK 142
Cdd:pfam10233  81 WLSlcVFATSLIAGAVLLFITGVCYGLAALGKQ 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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