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Conserved domains on  [gi|13899259|ref|NP_113623|]
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THAP domain-containing protein 2 [Homo sapiens]

Protein Classification

THAP domain-containing protein( domain architecture ID 10527248)

THAP domain-containing protein may act as a DNA-binding transcription regulator

CATH:  3.30.40.180|2.40.128.20
Gene Ontology:  GO:0003677|GO:0046872|GO:0043565
PubMed:  12575992|20144952
SCOP:  4002822

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
THAP pfam05485
THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a ...
 5-80 5.20e-27

THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


:

Pssm-ID: 461662  Cd Length: 76  Bit Score: 98.76  E-value: 5.20e-27
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 13899259     5 CAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIF 80
Cdd:pfam05485   1 CSVPGCTNRKKKNPRTSFHKFPKDPERRKKWLNACKRKDLPPPSNSYVCSLHFEENDFEKSGGKRKLKPGAIPTLF 76
 
Name Accession Description Interval E-value
THAP pfam05485
THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a ...
 5-80 5.20e-27

THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 461662  Cd Length: 76  Bit Score: 98.76  E-value: 5.20e-27
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 13899259     5 CAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIF 80
Cdd:pfam05485   1 CSVPGCTNRKKKNPRTSFHKFPKDPERRKKWLNACKRKDLPPPSNSYVCSLHFEENDFEKSGGKRKLKPGAIPTLF 76
THAP smart00980
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It ...
 5-81 7.54e-23

The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 214951  Cd Length: 80  Bit Score: 88.26  E-value: 7.54e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13899259      5 CAAAGCATTYNKHINISFHRFPL-DPKRRKEWVRLVRRKNFV---PGKHTFLCSKHFEASCFDLTGqtRRLKMDAVPTIF 80
Cdd:smart00980   2 CCVPGCGNRSKKNPGLSFFRFPKeDPELRKKWLENLGLPDDPnrkPKKRSRICSRHFEPDDFDNSG--RRLKPGAVPTLF 79


                   .
gi 13899259     81 D 81
Cdd:smart00980  80 L 80
 
Name Accession Description Interval E-value
THAP pfam05485
THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a ...
 5-80 5.20e-27

THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 461662  Cd Length: 76  Bit Score: 98.76  E-value: 5.20e-27
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 13899259     5 CAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIF 80
Cdd:pfam05485   1 CSVPGCTNRKKKNPRTSFHKFPKDPERRKKWLNACKRKDLPPPSNSYVCSLHFEENDFEKSGGKRKLKPGAIPTLF 76
THAP smart00980
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It ...
 5-81 7.54e-23

The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 214951  Cd Length: 80  Bit Score: 88.26  E-value: 7.54e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13899259      5 CAAAGCATTYNKHINISFHRFPL-DPKRRKEWVRLVRRKNFV---PGKHTFLCSKHFEASCFDLTGqtRRLKMDAVPTIF 80
Cdd:smart00980   2 CCVPGCGNRSKKNPGLSFFRFPKeDPELRKKWLENLGLPDDPnrkPKKRSRICSRHFEPDDFDNSG--RRLKPGAVPTLF 79


                   .
gi 13899259     81 D 81
Cdd:smart00980  80 L 80
DM3 smart00692
Zinc finger domain in CG10631, C. elegans LIN-15B and human P52rIPK;
22-80 1.94e-12

Zinc finger domain in CG10631, C. elegans LIN-15B and human P52rIPK;


Pssm-ID: 128933  Cd Length: 59  Bit Score: 60.01  E-value: 1.94e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 13899259     22 FHRFPLDPKRRKEWVRLVR-RKNFVPGKHTFLCSKHFEASCFdltGQTRRLKMDAVPTIF 80
Cdd:smart00692   1 LFRFPKDPELLKKWEHNLRlSPDEKKLKNSRICSRHFEPECF---GKRRRLKPGAVPTLE 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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