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Conserved domains on  [gi|42561665|ref|NP_171867|]
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Cystatin/monellin superfamily protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Atha_cystat_rel super family cl11766
Arabidopsis thaliana cystatin-related protein; This model represents a family similar in ...
 109-198 2.96e-18

Arabidopsis thaliana cystatin-related protein; This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam00031. Cystatins may help plants resist attack by insects.


The actual alignment was detected with superfamily member TIGR01638:

Pssm-ID: 130699  Cd Length: 92  Bit Score: 76.01  E-value: 2.96e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561665   109 DAPFFKPNMTGRDYMEIMANVAIDKYNQVENKTLKLDHIVRVTVQLSYGYKAYITFMAKESPHGELVEYQAKAERKAwqr 188
Cdd:TIGR01638   1 DWEAIRPIETNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVYL--- 77

                          90
                  ....*....|
gi 42561665   189 NIHPIFCRPA 198
Cdd:TIGR01638  78 HRHPIVCRPT 87
 
Name Accession Description Interval E-value
Atha_cystat_rel TIGR01638
Arabidopsis thaliana cystatin-related protein; This model represents a family similar in ...
 109-198 2.96e-18

Arabidopsis thaliana cystatin-related protein; This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam00031. Cystatins may help plants resist attack by insects.


Pssm-ID: 130699  Cd Length: 92  Bit Score: 76.01  E-value: 2.96e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561665   109 DAPFFKPNMTGRDYMEIMANVAIDKYNQVENKTLKLDHIVRVTVQLSYGYKAYITFMAKESPHGELVEYQAKAERKAwqr 188
Cdd:TIGR01638   1 DWEAIRPIETNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVYL--- 77

                          90
                  ....*....|
gi 42561665   189 NIHPIFCRPA 198
Cdd:TIGR01638  78 HRHPIVCRPT 87
CY cd00042
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 102-190 7.09e-04

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 238002 [Multi-domain]  Cd Length: 105  Bit Score: 37.84  E-value: 7.09e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561665 102 GIRPLDLDAPFFKPnmtgrdymeiMANVAIDKYNQVENKT-LKLDHIVRVTVQLSYGYKAYITFMAKES----------- 169
Cdd:cd00042   2 GPSDIPANDPEVQE----------LADFAVAEYNKKSNDKyLEFFKVLSAKSQVVAGTNYYITVEAGDTnckkssvpldc 71

                        90       100
                ....*....|....*....|....*..
gi 42561665 170 ------PHGELVEYQAKAERKAWQRNI 190
Cdd:cd00042  72 pdckllEEGKKKFCTAKVWEKPWENFK 98
 
Name Accession Description Interval E-value
Atha_cystat_rel TIGR01638
Arabidopsis thaliana cystatin-related protein; This model represents a family similar in ...
 109-198 2.96e-18

Arabidopsis thaliana cystatin-related protein; This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam00031. Cystatins may help plants resist attack by insects.


Pssm-ID: 130699  Cd Length: 92  Bit Score: 76.01  E-value: 2.96e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561665   109 DAPFFKPNMTGRDYMEIMANVAIDKYNQVENKTLKLDHIVRVTVQLSYGYKAYITFMAKESPHGELVEYQAKAERKAwqr 188
Cdd:TIGR01638   1 DWEAIRPIETNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVYL--- 77

                          90
                  ....*....|
gi 42561665   189 NIHPIFCRPA 198
Cdd:TIGR01638  78 HRHPIVCRPT 87
CY cd00042
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 102-190 7.09e-04

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 238002 [Multi-domain]  Cd Length: 105  Bit Score: 37.84  E-value: 7.09e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561665 102 GIRPLDLDAPFFKPnmtgrdymeiMANVAIDKYNQVENKT-LKLDHIVRVTVQLSYGYKAYITFMAKES----------- 169
Cdd:cd00042   2 GPSDIPANDPEVQE----------LADFAVAEYNKKSNDKyLEFFKVLSAKSQVVAGTNYYITVEAGDTnckkssvpldc 71

                        90       100
                ....*....|....*....|....*..
gi 42561665 170 ------PHGELVEYQAKAERKAWQRNI 190
Cdd:cd00042  72 pdckllEEGKKKFCTAKVWEKPWENFK 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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