|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02785 |
PLN02785 |
Protein HOTHEAD |
10-572 |
0e+00 |
|
Protein HOTHEAD
Pssm-ID: 215420 [Multi-domain] Cd Length: 587 Bit Score: 700.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 10 LFVALSLFLHSPICSSDKAP-----NYSFMRDATGSPTTSY----------YDYIIIGGGTAGCPLAATLSQNASVLLLE 74
Cdd:PLN02785 5 LFLFLLLLCLPTSSSSQGKShftpyRYPFIDKASSFSSSSSsssssggdsaYDYIVVGGGTAGCPLAATLSQNFSVLLLE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 75 RGDSPYNNPNITRLSAFGAALSDLSESSPSQRFVSEDGVINARARVLGGGSALNAGFYTRAGTKYVRNMGWDGALANESY 154
Cdd:PLN02785 85 RGGVPFGNANVSFLENFHIGLADTSPTSASQAFISTDGVINARARVLGGGTCINAGFYSRASTRFIQKAGWDAKLVNESY 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 155 QWVEAKVAFQPPMGRWQTAVRDGLLEAGIVPNNGFTYDHINGTKFGGTIFDRNGNRHTAADLLEYADPKGITVLLHATVH 234
Cdd:PLN02785 165 PWVERQIVHWPKVAPWQAALRDSLLEVGVSPFNGFTYDHVYGTKVGGTIFDEFGRRHTAAELLAAGNPNKLRVLLHATVQ 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 235 RILFRTrGTTKPIANGVVYRDRTGQAHRAYLKEGALSEIILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMDQPHVGQG 314
Cdd:PLN02785 245 KIVFDT-SGKRPRATGVIFKDENGNQHQAFLSNNKGSEIILSAGAIGSPQMLLLSGIGPKKELKKHKIPVVLHNEHVGKG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 315 MYDNPMNAVFVPSPVPVEVSLIEVVGITGEGTYVEAAGGenfgggggGSSGSSSTRDYYAMFS----------PRATLLE 384
Cdd:PLN02785 324 MADNPMNSIFVPSKAPVEQSLIQTVGITKMGVYIEASSG--------FGQSPDSIHCHHGIMSaeigqlstipPKQRTPE 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 385 S-NSMTKLSSAQP---FQGGFLLEKVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSR 460
Cdd:PLN02785 396 AiQAYIHRKKNLPheaFNGGFILEKIAGPISTGHLSLINTNVDDNPSVTFNYFKHPQDLQRCVYGIRTIEKIVKTNHFTN 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 461 YKYAD-VSFEYLLNLTASTPVNLRPPRSGPGASLppsaEEFCQHTVTTIWHYHGGCVVGRVVDGDYKVIGIDRLRVIDMS 539
Cdd:PLN02785 476 FTQCDkQTMEKVLNMSVKANINLIPKHTNDTKSL----EQFCKDTVITIWHYHGGCHVGKVVDQNYKVLGVSRLRVIDGS 551
|
570 580 590
....*....|....*....|....*....|...
gi 22329512 540 TVGYCPGTNPQATVMMLGRYMGVKILRERLTKK 572
Cdd:PLN02785 552 TFDESPGTNPQATVMMMGRYMGVKILRERLGRA 584
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
46-571 |
1.14e-68 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 230.87 E-value: 1.14e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 46 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGDSPyNNPNITRLSAFGAALSDLS-----ESSPsQRFVSEDGVINARA 118
Cdd:COG2303 5 YDYVIVGAGSAGCVLANRLSEDAglRVLLLEAGGRD-DDPLIRMPAGYAKLLGNPRydwryETEP-QPGLNGRRLYWPRG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 119 RVLGGGSALNAGFYTR-----------AG-------------TKYVRNMGWDGALANESYQWveaKVAFQPPMGRWQTAV 174
Cdd:COG2303 83 KVLGGSSSINGMIYVRgqpedfdlwaqLGnqgwgyddvlpyfKRAEDNERGADAYHGRSGPL---PVSDPPLPNPLSDAF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 175 RDGLLEAGIVPNNGFtydhiNGTK-FGGTIFD---RNGNRHTAADllEYADP----KGITVLLHATVHRILFRtrGTTkp 246
Cdd:COG2303 160 IEAAEELGIPRADDF-----NGGAcEGCGFCQvtcRNGARWSAAR--AYLPPalkrPNLTVRTGALVTRILFD--GGR-- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 247 iANGVVYRDRtGQAHRAYlkegALSEIILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMDQPHVGQGMYDNPMNAV--F 324
Cdd:COG2303 229 -ATGVEYRDD-GEEHTVR----AAREVILAAGAINSPQLLLLSGIGPASHLREHGIPVVHDLPGVGRNLQDHLEVSVvfR 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 325 VPSPVPVEVSLIEVVGI-------TGEGT--YVEAAGgenFggggGGSSGSSSTRDYYAMFSP--------RATLLESNS 387
Cdd:COG2303 303 FKEPVTLNKSLRKARIGlqylltrSGPLTsnVAEAGG---F----FRSDPGLERPDLQFHFLPlgltprwgKKALHDGHG 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 388 MTklssaqpFQGGfllekVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSRYkyadvs 467
Cdd:COG2303 376 FT-------AHVE-----QLRPESRGRVTLDSADPLGAPLIRPNYLSDENDRRVLVAGVRLAREIAAQPALAPY------ 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 468 feyllnltastpvnlRPPRSGPGASLPPSAE-EFCQHTVTTIWHYHGGCVVGR----VVDGDYKVIGIDRLRVID---MS 539
Cdd:COG2303 438 ---------------RGEEILPGPDVQSDEElAFIRARAYTIYHPVGTCRMGTdpdsVVDPRLRVHGVENLRVVDasvMP 502
|
570 580 590
....*....|....*....|....*....|..
gi 22329512 540 TVgycPGTNPQATVMMLGrYMGVKILRERLTK 571
Cdd:COG2303 503 TI---TSGNTNAPTIMLA-EKAADMILGDYLK 530
|
|
| GMC_oxred_C |
pfam05199 |
GMC oxidoreductase; This domain found associated with pfam00732. |
409-557 |
8.75e-24 |
|
GMC oxidoreductase; This domain found associated with pfam00732.
Pssm-ID: 398739 [Multi-domain] Cd Length: 143 Bit Score: 97.47 E-value: 8.75e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 409 PLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSRYKyadvsfeyllNLTASTPVNLRPPRSG 488
Cdd:pfam05199 1 PRSRGRVTLSSSDPTGLPVIDPNYLSDPADLAALRAALRLARRILAAAGLVLGV----------ELTPGPVPEVSDAAVT 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22329512 489 PGASLppsaEEFCQHTVTTIWHYHGGCVVGR-----VVDGDYKVIGIDRLRVIDMSTVGYCPGTNPQATVMMLG 557
Cdd:pfam05199 71 SDDEL----LAYIRAAASTSYHPMGTCRMGAdpddaVVDPDLRVHGVDNLRVVDASVFPSSPSGNPTLTIYALA 140
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
46-129 |
4.90e-04 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 42.31 E-value: 4.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 46 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGDSPynnpnitRLSAFGAALSDLSESSPSQRFVSEDGVINARARVLGGG 124
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADkGLRVLLLEKKSFP-------RYKPCGGALSPRALEELDLPGELIVNLVRGARFFSPNG 73
|
....*
gi 22329512 125 SALNA 129
Cdd:TIGR02032 74 DSVEI 78
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02785 |
PLN02785 |
Protein HOTHEAD |
10-572 |
0e+00 |
|
Protein HOTHEAD
Pssm-ID: 215420 [Multi-domain] Cd Length: 587 Bit Score: 700.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 10 LFVALSLFLHSPICSSDKAP-----NYSFMRDATGSPTTSY----------YDYIIIGGGTAGCPLAATLSQNASVLLLE 74
Cdd:PLN02785 5 LFLFLLLLCLPTSSSSQGKShftpyRYPFIDKASSFSSSSSsssssggdsaYDYIVVGGGTAGCPLAATLSQNFSVLLLE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 75 RGDSPYNNPNITRLSAFGAALSDLSESSPSQRFVSEDGVINARARVLGGGSALNAGFYTRAGTKYVRNMGWDGALANESY 154
Cdd:PLN02785 85 RGGVPFGNANVSFLENFHIGLADTSPTSASQAFISTDGVINARARVLGGGTCINAGFYSRASTRFIQKAGWDAKLVNESY 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 155 QWVEAKVAFQPPMGRWQTAVRDGLLEAGIVPNNGFTYDHINGTKFGGTIFDRNGNRHTAADLLEYADPKGITVLLHATVH 234
Cdd:PLN02785 165 PWVERQIVHWPKVAPWQAALRDSLLEVGVSPFNGFTYDHVYGTKVGGTIFDEFGRRHTAAELLAAGNPNKLRVLLHATVQ 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 235 RILFRTrGTTKPIANGVVYRDRTGQAHRAYLKEGALSEIILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMDQPHVGQG 314
Cdd:PLN02785 245 KIVFDT-SGKRPRATGVIFKDENGNQHQAFLSNNKGSEIILSAGAIGSPQMLLLSGIGPKKELKKHKIPVVLHNEHVGKG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 315 MYDNPMNAVFVPSPVPVEVSLIEVVGITGEGTYVEAAGGenfgggggGSSGSSSTRDYYAMFS----------PRATLLE 384
Cdd:PLN02785 324 MADNPMNSIFVPSKAPVEQSLIQTVGITKMGVYIEASSG--------FGQSPDSIHCHHGIMSaeigqlstipPKQRTPE 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 385 S-NSMTKLSSAQP---FQGGFLLEKVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSR 460
Cdd:PLN02785 396 AiQAYIHRKKNLPheaFNGGFILEKIAGPISTGHLSLINTNVDDNPSVTFNYFKHPQDLQRCVYGIRTIEKIVKTNHFTN 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 461 YKYAD-VSFEYLLNLTASTPVNLRPPRSGPGASLppsaEEFCQHTVTTIWHYHGGCVVGRVVDGDYKVIGIDRLRVIDMS 539
Cdd:PLN02785 476 FTQCDkQTMEKVLNMSVKANINLIPKHTNDTKSL----EQFCKDTVITIWHYHGGCHVGKVVDQNYKVLGVSRLRVIDGS 551
|
570 580 590
....*....|....*....|....*....|...
gi 22329512 540 TVGYCPGTNPQATVMMLGRYMGVKILRERLTKK 572
Cdd:PLN02785 552 TFDESPGTNPQATVMMMGRYMGVKILRERLGRA 584
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
46-571 |
1.14e-68 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 230.87 E-value: 1.14e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 46 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGDSPyNNPNITRLSAFGAALSDLS-----ESSPsQRFVSEDGVINARA 118
Cdd:COG2303 5 YDYVIVGAGSAGCVLANRLSEDAglRVLLLEAGGRD-DDPLIRMPAGYAKLLGNPRydwryETEP-QPGLNGRRLYWPRG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 119 RVLGGGSALNAGFYTR-----------AG-------------TKYVRNMGWDGALANESYQWveaKVAFQPPMGRWQTAV 174
Cdd:COG2303 83 KVLGGSSSINGMIYVRgqpedfdlwaqLGnqgwgyddvlpyfKRAEDNERGADAYHGRSGPL---PVSDPPLPNPLSDAF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 175 RDGLLEAGIVPNNGFtydhiNGTK-FGGTIFD---RNGNRHTAADllEYADP----KGITVLLHATVHRILFRtrGTTkp 246
Cdd:COG2303 160 IEAAEELGIPRADDF-----NGGAcEGCGFCQvtcRNGARWSAAR--AYLPPalkrPNLTVRTGALVTRILFD--GGR-- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 247 iANGVVYRDRtGQAHRAYlkegALSEIILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMDQPHVGQGMYDNPMNAV--F 324
Cdd:COG2303 229 -ATGVEYRDD-GEEHTVR----AAREVILAAGAINSPQLLLLSGIGPASHLREHGIPVVHDLPGVGRNLQDHLEVSVvfR 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 325 VPSPVPVEVSLIEVVGI-------TGEGT--YVEAAGgenFggggGGSSGSSSTRDYYAMFSP--------RATLLESNS 387
Cdd:COG2303 303 FKEPVTLNKSLRKARIGlqylltrSGPLTsnVAEAGG---F----FRSDPGLERPDLQFHFLPlgltprwgKKALHDGHG 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 388 MTklssaqpFQGGfllekVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSRYkyadvs 467
Cdd:COG2303 376 FT-------AHVE-----QLRPESRGRVTLDSADPLGAPLIRPNYLSDENDRRVLVAGVRLAREIAAQPALAPY------ 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 468 feyllnltastpvnlRPPRSGPGASLPPSAE-EFCQHTVTTIWHYHGGCVVGR----VVDGDYKVIGIDRLRVID---MS 539
Cdd:COG2303 438 ---------------RGEEILPGPDVQSDEElAFIRARAYTIYHPVGTCRMGTdpdsVVDPRLRVHGVENLRVVDasvMP 502
|
570 580 590
....*....|....*....|....*....|..
gi 22329512 540 TVgycPGTNPQATVMMLGrYMGVKILRERLTK 571
Cdd:COG2303 503 TI---TSGNTNAPTIMLA-EKAADMILGDYLK 530
|
|
| PRK02106 |
PRK02106 |
choline dehydrogenase; Validated |
42-565 |
4.93e-41 |
|
choline dehydrogenase; Validated
Pssm-ID: 235000 [Multi-domain] Cd Length: 560 Bit Score: 156.14 E-value: 4.93e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 42 TTSYYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGDSPYnnpnitRLSAF---GAALSDLSESSP-SQRFVSE----- 110
Cdd:PRK02106 2 TTMEYDYIIIGAGSAGCVLANRLSEDPdvSVLLLEAGGPDY------RWDFFiqmPAALAFPLQGKRyNWAYETEpephm 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 111 DG--VINARARVLGGGSALNAGFYTR------------AGTK---------YVRNM-----------GWDGALA------ 150
Cdd:PRK02106 76 NNrrMECPRGKVLGGSSSINGMVYIRgnamdydnwaelPGLEgwsyadclpYFKKAetrdggeddyrGGDGPLSvtrgkp 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 151 --NESYQ-WVEAKVafqppmgrwqtavrdgllEAGivpnngftY---DHINGTK---FGgtIFDR---NGNRHTAADllE 218
Cdd:PRK02106 156 gtNPLFQaFVEAGV------------------QAG--------YprtDDLNGYQqegFG--PMDRtvtNGRRWSAAR--A 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 219 YADP----KGITVLLHATVHRILFrtrgtTKPIANGVVYRdRTGQAHRAYlkegALSEIILSAGTLGSPQLLMLSGVGPS 294
Cdd:PRK02106 206 YLDPalkrPNLTIVTHALTDRILF-----EGKRAVGVEYE-RGGGRETAR----ARREVILSAGAINSPQLLQLSGIGPA 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 295 AQLQAQNITVVMDQPHVGQGMYDNpMNAVF---VPSPVPVEVSL----IEVVGI------TGEGT--YVEAAGgenFggg 359
Cdd:PRK02106 276 EHLKELGIPVVHDLPGVGENLQDH-LEVYIqyeCKQPVSLYPALkwwnKPKIGAewlftgTGLGAsnHFEAGG---F--- 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 360 gggssgsSSTRDYYAM------FSPRATLLESNSmtklssaqPFQG-GFLLEkvMGPL---STGHLELKTRNPKDNPIVT 429
Cdd:PRK02106 349 -------IRSRAGVDWpniqyhFLPVAIRYDGSN--------AVKGhGFQAH--VGPMrspSRGSVKLKSADPRAHPSIL 411
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 430 FNYFQHPDDLKRCVRGIQTIERVVQSKAFSRYKYADVSfeyllnltastpvnlrpprsgPGASLPPSAE--EFCQHTVTT 507
Cdd:PRK02106 412 FNYMSTEQDWREFRDAIRLTREIMAQPALDPYRGREIS---------------------PGADVQTDEEidAFVREHAET 470
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22329512 508 IWHYHGGCVVGR----VVDGDYKVIGIDRLRVIDMSTVGYCPGTNPQATVMMLGRYMGVKIL 565
Cdd:PRK02106 471 AYHPSCTCKMGTdpmaVVDPEGRVHGVEGLRVVDASIMPTITNGNLNAPTIMIAEKAADLIR 532
|
|
| GMC_oxred_C |
pfam05199 |
GMC oxidoreductase; This domain found associated with pfam00732. |
409-557 |
8.75e-24 |
|
GMC oxidoreductase; This domain found associated with pfam00732.
Pssm-ID: 398739 [Multi-domain] Cd Length: 143 Bit Score: 97.47 E-value: 8.75e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 409 PLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSRYKyadvsfeyllNLTASTPVNLRPPRSG 488
Cdd:pfam05199 1 PRSRGRVTLSSSDPTGLPVIDPNYLSDPADLAALRAALRLARRILAAAGLVLGV----------ELTPGPVPEVSDAAVT 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22329512 489 PGASLppsaEEFCQHTVTTIWHYHGGCVVGR-----VVDGDYKVIGIDRLRVIDMSTVGYCPGTNPQATVMMLG 557
Cdd:pfam05199 71 SDDEL----LAYIRAAASTSYHPMGTCRMGAdpddaVVDPDLRVHGVDNLRVVDASVFPSSPSGNPTLTIYALA 140
|
|
| GMC_oxred_N |
pfam00732 |
GMC oxidoreductase; This family of proteins bind FAD as a cofactor. |
46-301 |
1.56e-12 |
|
GMC oxidoreductase; This family of proteins bind FAD as a cofactor.
Pssm-ID: 366272 [Multi-domain] Cd Length: 218 Bit Score: 66.92 E-value: 1.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 46 YDYIIIGGGTAGCplaatlsqnasvlllergdspynnpnitrlsafgaalsdlsesSPSQRFvsedgvINARARVLGGGS 125
Cdd:pfam00732 1 YDYLYEGGGSAGS-------------------------------------------VNGRRM------ILPAGSTVGGGS 31
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 126 ALNAGFYTRaGTKYVR--------NMGWDGALANESYQWVEAKV----AFQPPMGRWQtAVRDGLLEAGI----VP--NN 187
Cdd:pfam00732 32 SVNWSACIR-TPAAVLdewasefgLEGWGYDDYLPYMDKVEGPLgvttKGIEESPLNQ-ALLKAAEELGYpveaVPrnSN 109
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 188 GFTYD--HINGTKFGgtifDRNGNRHTAadlLEYADPKGITVLLHATVHRILFRTRGttkPIANGVVYRDRTGQAHRayl 265
Cdd:pfam00732 110 GCHYCgfCGLGCPTG----AKQSTARTW---LRPALERNLRILTGAKAEKIIILGRG---GRAVGVEARDGGGGIKR--- 176
|
250 260 270
....*....|....*....|....*....|....*.
gi 22329512 266 KEGALSEIILSAGTLGSPQLLMLSGVGPSAQLQAQN 301
Cdd:pfam00732 177 LITAAKEVVVAAGALNTPPLLLRSGLGKNPHPVGKN 212
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
46-262 |
5.56e-05 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 45.98 E-value: 5.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 46 YDYIIIGGGTAGcpLAATLS---QNASVLLLERGDSPYNNpniTRLSAFGAALSDlsesSPSQRFVSEDgvinararvlg 122
Cdd:COG1053 4 YDVVVVGSGGAG--LRAALEaaeAGLKVLVLEKVPPRGGH---TAAAQGGINAAG----TNVQKAAGED----------- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 123 ggSALNAGFYTRAGTKY------VRnmgwdgALANESYQ---WVEAK-VAFQPpmgrwqtavrdglLEAGIVPNNGftyd 192
Cdd:COG1053 64 --SPEEHFYDTVKGGDGladqdlVE------ALAEEAPEaidWLEAQgVPFSR-------------TPDGRLPQFG---- 118
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22329512 193 hinGTKFGGTIF--DRNGNRHTAAdLLEYADPKGITVLLHATVHRILfRTRGTtkpiANGVVYRDRTGQAHR 262
Cdd:COG1053 119 ---GHSVGRTCYagDGTGHALLAT-LYQAALRLGVEIFTETEVLDLI-VDDGR----VVGVVARDRTGEIVR 181
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
40-75 |
2.32e-04 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 44.07 E-value: 2.32e-04
10 20 30
....*....|....*....|....*....|....*....
gi 22329512 40 SPTTSYYDY--IIIGGGTAGCPLAATLS-QNASVLLLER 75
Cdd:PTZ00367 26 KPARTNYDYdvIIVGGSIAGPVLAKALSkQGRKVLMLER 64
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
46-79 |
3.63e-04 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 43.21 E-value: 3.63e-04
10 20 30
....*....|....*....|....*....|....*.
gi 22329512 46 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGDSP 79
Cdd:COG0579 5 YDVVIIGAGIVGLALARELSRyeDLKVLVLEKEDDV 40
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
46-129 |
4.90e-04 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 42.31 E-value: 4.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329512 46 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGDSPynnpnitRLSAFGAALSDLSESSPSQRFVSEDGVINARARVLGGG 124
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADkGLRVLLLEKKSFP-------RYKPCGGALSPRALEELDLPGELIVNLVRGARFFSPNG 73
|
....*
gi 22329512 125 SALNA 129
Cdd:TIGR02032 74 DSVEI 78
|
|
| Lycopene_cycl |
pfam05834 |
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ... |
47-100 |
1.63e-03 |
|
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.
Pssm-ID: 310433 [Multi-domain] Cd Length: 380 Bit Score: 40.86 E-value: 1.63e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 22329512 47 DYIIIGGGTAGCPLAATLSQNA---SVLLLERGDSPYNNPNITrLSAFGAALSDLSE 100
Cdd:pfam05834 1 DVVIIGAGPAGLSLAARLAAAKpglSVVLIEPGPSLLRPNNYV-WSDEFEDLGALED 56
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
46-77 |
5.15e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 39.42 E-value: 5.15e-03
10 20 30
....*....|....*....|....*....|...
gi 22329512 46 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGD 77
Cdd:PRK06370 6 YDAIVIGAGQAGPPLAARAAGlGMKVALIERGL 38
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
46-79 |
6.67e-03 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 39.10 E-value: 6.67e-03
10 20 30
....*....|....*....|....*....|....*
gi 22329512 46 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGDSP 79
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKrGRRVLLIEKGKKL 35
|
|
| |
