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Conserved domains on  [gi|79344495|ref|NP_172900|]
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Ankyrin repeat family protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
14-230 3.10e-15

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 75.76  E-value: 3.10e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  14 INELYALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWH 93
Cdd:COG0666  30 LLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEA 109

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  94 dGGLSRVKGRNGVTPFHLLVIRGDDDLVaECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLtgwiqrmsqkdayyI 173
Cdd:COG0666 110 -GADVNARDKDGETPLHLAAYNGNLEIV-KLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLL--------------L 173

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 79344495 174 ENRV-LNKRDFDFNTALHLAAYKNDQQALKLLLKcRLVEPNLVNIDDLTFVDILRTQG 230
Cdd:COG0666 174 EAGAdVNARDNDGETPLHLAAENGHLEIVKLLLE-AGADVNAKDNDGKTALDLAAENG 230
PGG super family cl16503
Domain of unknown function; The PGG domain is named for the highly conserved sequence motif ...
 291-385 5.18e-10

Domain of unknown function; The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known.


The actual alignment was detected with superfamily member pfam13962:

Pssm-ID: 433609  Cd Length: 114  Bit Score: 56.79  E-value: 5.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   291 RGAFLIVCTLIITATYQMALQPPGGVHQsENANANAGSVVM-KQTFFILLWISNTVGFCCAVFYTFCLIPLGQLFT---I 366
Cdd:pfam13962   8 RNTLLLVATLIATVTFAAGFTPPGGYWQ-DDDGPHAGKPILaKNPAFKAFVISNAIAFFASLVAVVLLLSIVSDFLrslP 86

                          90
                  ....*....|....*....
gi 79344495   367 WFFYIGTCLCISYALAMAV 385
Cdd:pfam13962  87 RKLRIGLKLLWVALLSMLV 105
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
14-230 3.10e-15

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 75.76  E-value: 3.10e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  14 INELYALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWH 93
Cdd:COG0666  30 LLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEA 109

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  94 dGGLSRVKGRNGVTPFHLLVIRGDDDLVaECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLtgwiqrmsqkdayyI 173
Cdd:COG0666 110 -GADVNARDKDGETPLHLAAYNGNLEIV-KLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLL--------------L 173

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 79344495 174 ENRV-LNKRDFDFNTALHLAAYKNDQQALKLLLKcRLVEPNLVNIDDLTFVDILRTQG 230
Cdd:COG0666 174 EAGAdVNARDNDGETPLHLAAENGHLEIVKLLLE-AGADVNAKDNDGKTALDLAAENG 230
PGG pfam13962
Domain of unknown function; The PGG domain is named for the highly conserved sequence motif ...
 291-385 5.18e-10

Domain of unknown function; The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known.


Pssm-ID: 433609  Cd Length: 114  Bit Score: 56.79  E-value: 5.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   291 RGAFLIVCTLIITATYQMALQPPGGVHQsENANANAGSVVM-KQTFFILLWISNTVGFCCAVFYTFCLIPLGQLFT---I 366
Cdd:pfam13962   8 RNTLLLVATLIATVTFAAGFTPPGGYWQ-DDDGPHAGKPILaKNPAFKAFVISNAIAFFASLVAVVLLLSIVSDFLrslP 86

                          90
                  ....*....|....*....
gi 79344495   367 WFFYIGTCLCISYALAMAV 385
Cdd:pfam13962  87 RKLRIGLKLLWVALLSMLV 105
Ank_2 pfam12796
Ankyrin repeats (3 copies);
109-207 4.29e-08

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 50.50  E-value: 4.29e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   109 FHLLVIRGDDDLVaECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLtgwiqrmsqkdayyIENRVLNKRDFDfNTA 188
Cdd:pfam12796   1 LHLAAKNGNLELV-KLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLL--------------LEHADVNLKDNG-RTA 64

                          90
                  ....*....|....*....
gi 79344495   189 LHLAAYKNDQQALKLLLKC 207
Cdd:pfam12796  65 LHYAARSGHLEIVKLLLEK 83
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 44-208 2.66e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 52.69  E-value: 2.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   44 AAVFGNIEFAMEMLN--LKPSFARklnTSGYSPLHLAVEKEQSDFVSHMLWHdGGLSRVKGRNGVTPFHLLVIRGDDDLV 121
Cdd:PHA02875   9 AILFGELDIARRLLDigINPNFEI---YDGISPIKLAMKFRDSEAIKLLMKH-GAIPDVKYPDIESELHDAVEEGDVKAV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  122 aECLITSPECIEDVNVDRQNA-LHLAVMNDRFEVLQVLtgwIQRMSQKDayyIENRvlnkrdfDFNTALHLAAYKNDQQA 200
Cdd:PHA02875  85 -EELLDLGKFADDVFYKDGMTpLHLATILKKLDIMKLL---IARGADPD---IPNT-------DKFSPLHLAVMMGDIKG 150


                 ....*...
gi 79344495  201 LKLLLKCR 208
Cdd:PHA02875 151 IELLIDHK 158
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
14-230 3.10e-15

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 75.76  E-value: 3.10e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  14 INELYALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWH 93
Cdd:COG0666  30 LLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEA 109

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  94 dGGLSRVKGRNGVTPFHLLVIRGDDDLVaECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLtgwiqrmsqkdayyI 173
Cdd:COG0666 110 -GADVNARDKDGETPLHLAAYNGNLEIV-KLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLL--------------L 173

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 79344495 174 ENRV-LNKRDFDFNTALHLAAYKNDQQALKLLLKcRLVEPNLVNIDDLTFVDILRTQG 230
Cdd:COG0666 174 EAGAdVNARDNDGETPLHLAAENGHLEIVKLLLE-AGADVNAKDNDGKTALDLAAENG 230
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
1-248 3.37e-15

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 75.76  E-value: 3.37e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   1 MDLRLQQAAESGSINELYALIDENPYILENIDAVpfvSTPLHVAAVFGNIEFAMEMLNLKPSFARKlNTSGYSPLHLAVE 80
Cdd:COG0666  54 GALLLLAAALAGDLLVALLLLAAGADINAKDDGG---NTLLHAAARNGDLEIVKLLLEAGADVNAR-DKDGETPLHLAAY 129

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  81 KEQSDFVSHMLwhDGGLS-RVKGRNGVTPFHLLVIRGDDDLVaECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLt 159
Cdd:COG0666 130 NGNLEIVKLLL--EAGADvNAQDNDGNTPLHLAAANGNLEIV-KLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLL- 205

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495 160 gwiqrmsqkdayyIENRV-LNKRDFDFNTALHLAAYKNDQQALKLLLKcRLVEPNLVNIDDLTFVDILRTQGENAGGGNL 238
Cdd:COG0666 206 -------------LEAGAdVNAKDNDGKTALDLAAENGNLEIVKLLLE-AGADLNAKDKDGLTALLLAAAAGAALIVKLL 271

                       250
                ....*....|
gi 79344495 239 DLEQAVIKTG 248
Cdd:COG0666 272 LLALLLLAAA 281
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
19-221 2.83e-12

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 66.90  E-value: 2.83e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  19 ALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWHDGGLS 98
Cdd:COG0666   1 LLLLLLLLLLLLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADI 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  99 RVKGRNGVTPFHLLVIRGDDDLVAEcLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLtgwiqrmsqkdayyIENRV- 177
Cdd:COG0666  81 NAKDDGGNTLLHAAARNGDLEIVKL-LLEAGADVNARDKDGETPLHLAAYNGNLEIVKLL--------------LEAGAd 145

                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 79344495 178 LNKRDFDFNTALHLAAYKNDQQALKLLLKcRLVEPNLVNIDDLT 221
Cdd:COG0666 146 VNAQDNDGNTPLHLAAANGNLEIVKLLLE-AGADVNARDNDGET 188
PGG pfam13962
Domain of unknown function; The PGG domain is named for the highly conserved sequence motif ...
 291-385 5.18e-10

Domain of unknown function; The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known.


Pssm-ID: 433609  Cd Length: 114  Bit Score: 56.79  E-value: 5.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   291 RGAFLIVCTLIITATYQMALQPPGGVHQsENANANAGSVVM-KQTFFILLWISNTVGFCCAVFYTFCLIPLGQLFT---I 366
Cdd:pfam13962   8 RNTLLLVATLIATVTFAAGFTPPGGYWQ-DDDGPHAGKPILaKNPAFKAFVISNAIAFFASLVAVVLLLSIVSDFLrslP 86

                          90
                  ....*....|....*....
gi 79344495   367 WFFYIGTCLCISYALAMAV 385
Cdd:pfam13962  87 RKLRIGLKLLWVALLSMLV 105
Ank_2 pfam12796
Ankyrin repeats (3 copies);
109-207 4.29e-08

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 50.50  E-value: 4.29e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   109 FHLLVIRGDDDLVaECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLtgwiqrmsqkdayyIENRVLNKRDFDfNTA 188
Cdd:pfam12796   1 LHLAAKNGNLELV-KLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLL--------------LEHADVNLKDNG-RTA 64

                          90
                  ....*....|....*....
gi 79344495   189 LHLAAYKNDQQALKLLLKC 207
Cdd:pfam12796  65 LHYAARSGHLEIVKLLLEK 83
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 44-208 2.66e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 52.69  E-value: 2.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   44 AAVFGNIEFAMEMLN--LKPSFARklnTSGYSPLHLAVEKEQSDFVSHMLWHdGGLSRVKGRNGVTPFHLLVIRGDDDLV 121
Cdd:PHA02875   9 AILFGELDIARRLLDigINPNFEI---YDGISPIKLAMKFRDSEAIKLLMKH-GAIPDVKYPDIESELHDAVEEGDVKAV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495  122 aECLITSPECIEDVNVDRQNA-LHLAVMNDRFEVLQVLtgwIQRMSQKDayyIENRvlnkrdfDFNTALHLAAYKNDQQA 200
Cdd:PHA02875  85 -EELLDLGKFADDVFYKDGMTpLHLATILKKLDIMKLL---IARGADPD---IPNT-------DKFSPLHLAVMMGDIKG 150


                 ....*...
gi 79344495  201 LKLLLKCR 208
Cdd:PHA02875 151 IELLIDHK 158
Ank_2 pfam12796
Ankyrin repeats (3 copies);
5-87 3.60e-07

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 47.80  E-value: 3.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495     5 LQQAAESGSINELYALIDENPyileNIDAV-PFVSTPLHVAAVFGNIEFAMEMLNlkpSFARKLNTSGYSPLHLAVEKEQ 83
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGA----DANLQdKNGRTALHLAAKNGHLEIVKLLLE---HADVNLKDNGRTALHYAARSGH 73


                  ....
gi 79344495    84 SDFV 87
Cdd:pfam12796  74 LEIV 77
Ank_2 pfam12796
Ankyrin repeats (3 copies);
41-121 1.93e-05

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 43.18  E-value: 1.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495    41 LHVAAVFGNIEFAMEMLNLKPSfARKLNTSGYSPLHLAVEKEQSDFVSHMLWHDGGLSRVKGRngvTPFHLLVIRGDDDL 120
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGAD-ANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLKDNGR---TALHYAARSGHLEI 76


                  .
gi 79344495   121 V 121
Cdd:pfam12796  77 V 77
Ank_4 pfam13637
Ankyrin repeats (many copies);
141-205 1.09e-03

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 36.87  E-value: 1.09e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 79344495   141 NALHLAVMNDRFEVLQVLtgwiqrmsqkdayyIENRV-LNKRDFDFNTALHLAAYKNDQQALKLLL 205
Cdd:pfam13637   3 TALHAAAASGHLELLRLL--------------LEKGAdINAVDGNGETALHFAASNGNVEVLKLLL 54
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 90-221 4.52e-03

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 39.26  E-value: 4.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   90 MLWHDGGLSRVKGRNGVTPFHLLVIR--GDDDLVaECLITSPECIEDVNVDRQNALHLAVMN--DRFEVLQVLtgwIQRM 165
Cdd:PHA03100  91 LLLEYGANVNAPDNNGITPLLYAISKksNSYSIV-EYLLDNGANVNIKNSDGENLLHLYLESnkIDLKILKLL---IDKG 166

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 79344495  166 SQKDA-----YYIENRV-LNKRDFDFNTALHLAAYKNDQQALKLLLKCRlVEPNLVNIDDLT 221
Cdd:PHA03100 167 VDINAknrvnYLLSYGVpINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG-ANPNLVNKYGDT 227
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 35-134 4.72e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 39.20  E-value: 4.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79344495   35 PFVSTPLHVAAVFGNIEfAMEMLNLKPSFARK-LNTSGYSPLHLAVEKEQSDFVSHMLWHdGGLSRVKGRNGVTPFHLLV 113
Cdd:PHA02875  66 PDIESELHDAVEEGDVK-AVEELLDLGKFADDvFYKDGMTPLHLATILKKLDIMKLLIAR-GADPDIPNTDKFSPLHLAV 143

                         90       100
                 ....*....|....*....|...
gi 79344495  114 IRGDDDLVaECLITSPEC--IED 134
Cdd:PHA02875 144 MMGDIKGI-ELLIDHKACldIED 165
Ank_4 pfam13637
Ankyrin repeats (many copies);
105-158 5.49e-03

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 34.94  E-value: 5.49e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 79344495   105 GVTPFHLLVIRGDDDLVAECLITSPEcIEDVNVDRQNALHLAVMNDRFEVLQVL 158
Cdd:pfam13637   1 ELTALHAAAASGHLELLRLLLEKGAD-INAVDGNGETALHFAASNGNVEVLKLL 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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