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Conserved domains on  [gi|15218058|ref|NP_172964|]
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Ubiquinol-cytochrome C reductase hinge protein [Arabidopsis thaliana]

Protein Classification

cytochrome b-c1 complex subunit 6 family protein( domain architecture ID 10491949)

cytochrome b-c1 complex subunit 6 family protein is a component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation

Gene Ontology:  GO:0006122|GO:1902600
PubMed:  14977419|11192733|23876289|16005845

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UCR_hinge pfam02320
Ubiquinol-cytochrome C reductase hinge protein; The ubiquinol-cytochrome C reductase complex ...
 8-69 1.43e-20

Ubiquinol-cytochrome C reductase hinge protein; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex.


:

Pssm-ID: 460531  Cd Length: 65  Bit Score: 76.06  E-value: 1.43e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15218058    8 DPKKYLEESC--KPKCVKPLLEYQACVKRIQGDDS-GHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69
Cdd:pfam02320  1 DPKDALREECkeKPKCAKLKHHYEECVERVTSRSEdTEEDCVEEFFDLVHCVDHCVAPKLFSKLK 65
 
Name Accession Description Interval E-value
UCR_hinge pfam02320
Ubiquinol-cytochrome C reductase hinge protein; The ubiquinol-cytochrome C reductase complex ...
 8-69 1.43e-20

Ubiquinol-cytochrome C reductase hinge protein; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex.


Pssm-ID: 460531  Cd Length: 65  Bit Score: 76.06  E-value: 1.43e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15218058    8 DPKKYLEESC--KPKCVKPLLEYQACVKRIQGDDS-GHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69
Cdd:pfam02320  1 DPKDALREECkeKPKCAKLKHHYEECVERVTSRSEdTEEDCVEEFFDLVHCVDHCVAPKLFSKLK 65
 
Name Accession Description Interval E-value
UCR_hinge pfam02320
Ubiquinol-cytochrome C reductase hinge protein; The ubiquinol-cytochrome C reductase complex ...
 8-69 1.43e-20

Ubiquinol-cytochrome C reductase hinge protein; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex.


Pssm-ID: 460531  Cd Length: 65  Bit Score: 76.06  E-value: 1.43e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15218058    8 DPKKYLEESC--KPKCVKPLLEYQACVKRIQGDDS-GHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69
Cdd:pfam02320  1 DPKDALREECkeKPKCAKLKHHYEECVERVTSRSEdTEEDCVEEFFDLVHCVDHCVAPKLFSKLK 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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