NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15220998|ref|NP_175224|]
View 

Ribonuclease inhibitor [Arabidopsis thaliana]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 14-94 8.29e-08

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 48.69  E-value: 8.29e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220998   14 NTTPGAKPKPAATQLSLSNIFLGFNNnFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCLETLmmSSLLYrpMTLASHKF 93
Cdd:PLN00113 198 NQLVGQIPRELGQMKSLKWIYLGYNN-LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL--KNLQY--LFLYQNKL 272


                 .
gi 15220998   94 S 94
Cdd:PLN00113 273 S 273
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 14-94 8.29e-08

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 48.69  E-value: 8.29e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220998   14 NTTPGAKPKPAATQLSLSNIFLGFNNnFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCLETLmmSSLLYrpMTLASHKF 93
Cdd:PLN00113 198 NQLVGQIPRELGQMKSLKWIYLGYNN-LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL--KNLQY--LFLYQNKL 272


                 .
gi 15220998   94 S 94
Cdd:PLN00113 273 S 273
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 14-94 8.29e-08

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 48.69  E-value: 8.29e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220998   14 NTTPGAKPKPAATQLSLSNIFLGFNNnFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCLETLmmSSLLYrpMTLASHKF 93
Cdd:PLN00113 198 NQLVGQIPRELGQMKSLKWIYLGYNN-LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL--KNLQY--LFLYQNKL 272


                 .
gi 15220998   94 S 94
Cdd:PLN00113 273 S 273
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 14-76 2.13e-05

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 41.76  E-value: 2.13e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15220998   14 NTTPGAKPKPAATQLSLSNIFLgFNNNFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCLETL 76
Cdd:PLN00113 246 NNLTGPIPSSLGNLKNLQYLFL-YQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQL 307
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 12-73 1.24e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 39.45  E-value: 1.24e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15220998   12 SPNTTPGAKPKPAAtQLSLSNIFLGFNNNFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCL 73
Cdd:PLN00113 292 SDNSLSGEIPELVI-QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNL 352
PLN03150 PLN03150
hypothetical protein; Provisional
 30-76 2.19e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 38.64  E-value: 2.19e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 15220998   30 LSNIFLGfNNNFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCLETL 76
Cdd:PLN03150 444 LQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 38-107 4.58e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 37.91  E-value: 4.58e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220998   38 NNNFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCLETLmmSSLLYrpMTLASHKFSWHLDHMILRISTL 107
Cdd:PLN00113 149 NNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNL--TSLEF--LTLASNQLVGQIPRELGQMKSL 214
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 37-73 6.13e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 37.52  E-value: 6.13e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 15220998   37 FNNNFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCL 73
Cdd:PLN00113 340 WSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 6-69 1.42e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 36.36  E-value: 1.42e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15220998    6 LYEAISSPNTTPGAKPKPAATQLSLSNIFLGfNNNFTGEIPQSICGLNSLYALDLLDNNLHGSI 69
Cdd:PLN00113 382 LFKLILFSNSLEGEIPKSLGACRSLRRVRLQ-DNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 39-73 1.47e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 36.36  E-value: 1.47e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 15220998   39 NNFTGEIPQSICGLNSLYALDLLDNNLHGSIPQCL 73
Cdd:PLN00113 366 NNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSL 400
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 38-80 1.68e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 36.36  E-value: 1.68e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 15220998   38 NNNFTGEIPQSICGL-NSLYALDLLDNNLHGSIPQ----CLETLMMSS 80
Cdd:PLN00113 102 NNQLSGPIPDDIFTTsSSLRYLNLSNNNFTGSIPRgsipNLETLDLSN 149
PLN03150 PLN03150
hypothetical protein; Provisional
 12-94 1.84e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 35.95  E-value: 1.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220998   12 SPNTTPGAKPKPAATQLSLSNIFLGFNNnFTGEIPQSICGLNSLYALDLLDNNLHGSIPqcletlmmSSLLYRPMTLASH 91
Cdd:PLN03150 450 SGNSIRGNIPPSLGSITSLEVLDLSYNS-FNGSIPESLGQLTSLRILNLNGNSLSGRVP--------AALGGRLLHRASF 520


                 ...
gi 15220998   92 KFS 94
Cdd:PLN03150 521 NFT 523
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 33-94 4.18e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 35.21  E-value: 4.18e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15220998   33 IFLGFNNNF-TGEIPQSICGLNSLYALDLLDNNLHGSIPQCLETLMMSSLLyrpmTLASHKFS 94
Cdd:PLN00113 287 ISLDLSDNSlSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVL----QLWSNKFS 345
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH