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Conserved domains on  [gi|15222811|ref|NP_175397|]
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Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 130-401 8.53e-31

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 126.89  E-value: 8.53e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  130 VLQRFKDLVAD--DKLKSWEGP-DICNkYLGLKCAIFPKTKhlalaSVQFNGLNLRGKIGKILKldnfldKLEEVTIFHA 206
Cdd:PLN00113  33 LLLSFKSSINDplKYLSNWNSSaDVCL-WQGITCNNSSRVV-----SIDLSGKNISGKISSAIF------RLPYIQTINL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  207 NSNGFTGSVPD--FSNLKFLYELDLSNNKLTGDFPTSVLKgnNLTFLDLRFNSFSGSVPPQV-FNLDLDVLFINNNNLVQ 283
Cdd:PLN00113 101 SNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTGSIPRGSIP--NLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVG 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  284 KLPLNLGSITAL-YLTFANNRFTGPIPESIGNIKYLQEVLFLNNKLTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGC 362
Cdd:PLN00113 179 KIPNSLTNLTSLeFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 15222811  363 LETMEQLNLAGNKFYGTIPEIVCEIACLQNVSLSNNYFT 401
Cdd:PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 130-401 8.53e-31

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 126.89  E-value: 8.53e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  130 VLQRFKDLVAD--DKLKSWEGP-DICNkYLGLKCAIFPKTKhlalaSVQFNGLNLRGKIGKILKldnfldKLEEVTIFHA 206
Cdd:PLN00113  33 LLLSFKSSINDplKYLSNWNSSaDVCL-WQGITCNNSSRVV-----SIDLSGKNISGKISSAIF------RLPYIQTINL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  207 NSNGFTGSVPD--FSNLKFLYELDLSNNKLTGDFPTSVLKgnNLTFLDLRFNSFSGSVPPQV-FNLDLDVLFINNNNLVQ 283
Cdd:PLN00113 101 SNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTGSIPRGSIP--NLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVG 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  284 KLPLNLGSITAL-YLTFANNRFTGPIPESIGNIKYLQEVLFLNNKLTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGC 362
Cdd:PLN00113 179 KIPNSLTNLTSLeFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 15222811  363 LETMEQLNLAGNKFYGTIPEIVCEIACLQNVSLSNNYFT 401
Cdd:PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
184-426 8.35e-17

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 82.29  E-value: 8.35e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 184 KIGKILKLDNFLDKLEEVTIFHANSNGFTGSVPDFSNLKFLYELDLSNNKLTGDFPtsvlkgnNLTFLDLRFNSFSgSVP 263
Cdd:COG4886  58 RDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLT-------NLESLDLSGNQLT-DLP 129

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 264 PQVFNLD-LDVLFINNNNLvQKLPLNLGSITAL-YLTFANNRFTGpIPESIGNIKYLQEVLFLNNKLTGcLPYQIGNLTR 341
Cdd:COG4886 130 EELANLTnLKELDLSNNQL-TDLPEPLGNLTNLkSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITD-LPEPLGNLTN 206

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 342 ATVFDVGFNQLTgPIPYSFGCLETMEQLNLAGNKFyGTIPEIvCEIACLQNVSLSNNYFTQVgPKCRKLIKRKIMDVSMN 421
Cdd:COG4886 207 LEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQL-TDLPEL-GNLTNLEELDLSNNQLTDL-PPLANLTNLKTLDLSNN 282


                ....*
gi 15222811 422 CILDL 426
Cdd:COG4886 283 QLTDL 287
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 130-401 8.53e-31

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 126.89  E-value: 8.53e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  130 VLQRFKDLVAD--DKLKSWEGP-DICNkYLGLKCAIFPKTKhlalaSVQFNGLNLRGKIGKILKldnfldKLEEVTIFHA 206
Cdd:PLN00113  33 LLLSFKSSINDplKYLSNWNSSaDVCL-WQGITCNNSSRVV-----SIDLSGKNISGKISSAIF------RLPYIQTINL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  207 NSNGFTGSVPD--FSNLKFLYELDLSNNKLTGDFPTSVLKgnNLTFLDLRFNSFSGSVPPQV-FNLDLDVLFINNNNLVQ 283
Cdd:PLN00113 101 SNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTGSIPRGSIP--NLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVG 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  284 KLPLNLGSITAL-YLTFANNRFTGPIPESIGNIKYLQEVLFLNNKLTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGC 362
Cdd:PLN00113 179 KIPNSLTNLTSLeFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 15222811  363 LETMEQLNLAGNKFYGTIPEIVCEIACLQNVSLSNNYFT 401
Cdd:PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 208-424 1.15e-21

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 98.77  E-value: 1.15e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  208 SNGFTGSVP-DFSNLKFLYELDLSNNKLTGDFPTSVLKGNNLTFLDLRFNSFSGSVPPQVFNLDLDVLFINNNNLVQKLP 286
Cdd:PLN00113 413 DNSFSGELPsEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVP 492

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  287 LNLGSITALY-LTFANNRFTGPIPESIGNIKYLQEVLFLNNKLTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGCLET 365
Cdd:PLN00113 493 RKLGSLSELMqLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVES 572

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15222811  366 MEQLNLAGNKFYGTIPEI-----VCEIACLQNVSLSNNYFTQVGPKCRKLIKRKIMDVSMNCIL 424
Cdd:PLN00113 573 LVQVNISHNHLHGSLPSTgaflaINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTL 636
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 209-401 1.69e-20

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 95.30  E-value: 1.69e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  209 NGFTGSVP-DFSNLKFLYELDLSNNKLTGDFPTSVLKGNNLTFLDLRFNSFSGSVPPQVFNL-DLDVLFINNNNLVQKLP 286
Cdd:PLN00113 246 NNLTGPIPsSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLqNLEILHLFSNNFTGKIP 325

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  287 LNLGSITAL-YLTFANNRFTGPIPESIGNIKYLQEVLFLNNKLTGCLPYQI---GNLTRATVFDvgfNQLTGPIPYSFGC 362
Cdd:PLN00113 326 VALTSLPRLqVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLcssGNLFKLILFS---NSLEGEIPKSLGA 402

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 15222811  363 LETMEQLNLAGNKFYGTIPEIVCEIACLQNVSLSNNYFT 401
Cdd:PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQ 441
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 161-400 2.01e-20

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 94.91  E-value: 2.01e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  161 AIFPKTKhlaLASVQFNGLNLRGKIGKILKldnfldKLEEVTIFHANSNGFTGSVPD-FSNLKFLYELDLSNNKLTGDFP 239
Cdd:PLN00113 279 SIFSLQK---LISLDLSDNSLSGEIPELVI------QLQNLEILHLFSNNFTGKIPVaLTSLPRLQVLQLWSNKFSGEIP 349

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  240 TSVLKGNNLTFLDLRFNSFSGSVP------------------------------------------------------PQ 265
Cdd:PLN00113 350 KNLGKHNNLTVLDLSTNNLTGEIPeglcssgnlfklilfsnslegeipkslgacrslrrvrlqdnsfsgelpseftklPL 429

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  266 VFNLD-------------------LDVLFINNNNLVQKLPLNLGSITALYLTFANNRFTGPIPESIGNIKYLQEVLFLNN 326
Cdd:PLN00113 430 VYFLDisnnnlqgrinsrkwdmpsLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN 509

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15222811  327 KLTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGCLETMEQLNLAGNKFYGTIPEIVCEIACLQNVSLSNNYF 400
Cdd:PLN00113 510 KLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHL 583
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 190-401 2.09e-20

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 94.91  E-value: 2.09e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  190 KLDNFLDKLEEVTIFHANSNGFTGSVP----DFSNLKFLY---------------------ELDLSNNKLTGDFPTSVLK 244
Cdd:PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIPrelgQMKSLKWIYlgynnlsgeipyeiggltslnHLDLVYNNLTGPIPSSLGN 258

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  245 GNNLTFLDLRFNSFSGSVPPQVFNL-DLDVLFINNNNLVQKLP---LNLGSITALYLtFANNrFTGPIPESIGNIKYLQE 320
Cdd:PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLqKLISLDLSDNSLSGEIPelvIQLQNLEILHL-FSNN-FTGKIPVALTSLPRLQV 336

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  321 VLFLNNKLTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGCLETMEQLNLAGNKFYGTIPEIVCEIACLQNVSLSNNYF 400
Cdd:PLN00113 337 LQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF 416


                 .
gi 15222811  401 T 401
Cdd:PLN00113 417 S 417
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
184-426 8.35e-17

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 82.29  E-value: 8.35e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 184 KIGKILKLDNFLDKLEEVTIFHANSNGFTGSVPDFSNLKFLYELDLSNNKLTGDFPtsvlkgnNLTFLDLRFNSFSgSVP 263
Cdd:COG4886  58 RDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLT-------NLESLDLSGNQLT-DLP 129

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 264 PQVFNLD-LDVLFINNNNLvQKLPLNLGSITAL-YLTFANNRFTGpIPESIGNIKYLQEVLFLNNKLTGcLPYQIGNLTR 341
Cdd:COG4886 130 EELANLTnLKELDLSNNQL-TDLPEPLGNLTNLkSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITD-LPEPLGNLTN 206

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 342 ATVFDVGFNQLTgPIPYSFGCLETMEQLNLAGNKFyGTIPEIvCEIACLQNVSLSNNYFTQVgPKCRKLIKRKIMDVSMN 421
Cdd:COG4886 207 LEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQL-TDLPEL-GNLTNLEELDLSNNQLTDL-PPLANLTNLKTLDLSNN 282


                ....*
gi 15222811 422 CILDL 426
Cdd:COG4886 283 QLTDL 287
PLN03150 PLN03150
hypothetical protein; Provisional
 297-381 1.99e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 63.30  E-value: 1.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  297 LTFANNRFTGPIPESIGNIKYLQEVLFLNNKLTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGCLETMEQLNLAGNKF 376
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                 ....*
gi 15222811  377 YGTIP 381
Cdd:PLN03150 503 SGRVP 507
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
174-428 7.04e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 61.10  E-value: 7.04e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 174 VQFNGLNLRGKIGKILKLDNFLDKLEEVTIFHANSNGFTGSVPDFSNLKFLYELDLSNNKLTGDFPTSVLKGNNLTFLDL 253
Cdd:COG4886   1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 254 RFNSFSGSVPPQVFNLDLDVLFINNNNLVQKLPlnlgSITALYLTfaNNRFTGpIPESIGNIKYLQEVLFLNNKLTGcLP 333
Cdd:COG4886  81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNLT----NLESLDLS--GNQLTD-LPEELANLTNLKELDLSNNQLTD-LP 152

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 334 YQIGNLTRATVFDVGFNQLTGpIPYSFGCLETMEQLNLAGNKFyGTIPEIVCEIACLQNVSLSNNYFTQVGPKCRKLIKR 413
Cdd:COG4886 153 EPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNL 230

                       250
                ....*....|....*
gi 15222811 414 KIMDVSMNCILDLPN 428
Cdd:COG4886 231 ETLDLSNNQLTDLPE 245
PLN03150 PLN03150
hypothetical protein; Provisional
 207-290 1.32e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 60.60  E-value: 1.32e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  207 NSNGFTGSVP-DFSNLKFLYELDLSNNKLTGDFPTSVLKGNNLTFLDLRFNSFSGSVPPQVFNL-DLDVLFINNNNLVQK 284
Cdd:PLN03150 426 DNQGLRGFIPnDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLtSLRILNLNGNSLSGR 505


                 ....*.
gi 15222811  285 LPLNLG 290
Cdd:PLN03150 506 VPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 223-350 1.32e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 54.05  E-value: 1.32e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  223 FLYELDLSNNKLTGDFPTSVLKGNNLTFLDLRFNSFSGSVPPqvfnldldvlfinnnnlvqklplNLGSITAL-YLTFAN 301
Cdd:PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP-----------------------SLGSITSLeVLDLSY 475

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 15222811  302 NRFTGPIPESIGNIKYLQEVLFLNNKLTGCLPYQIGN-LTRATVFDVGFN 350
Cdd:PLN03150 476 NSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGrLLHRASFNFTDN 525
PLN03150 PLN03150
hypothetical protein; Provisional
 322-421 9.90e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 51.36  E-value: 9.90e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811  322 LFLNNK-LTGCLPYQIGNLTRATVFDVGFNQLTGPIPYSFGCLETMEQLNLAGNKFYGTIPEIVCEIACLQNVSLSNNYF 400
Cdd:PLN03150 423 LGLDNQgLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                         90       100
                 ....*....|....*....|...
gi 15222811  401 TQVGPKC--RKLIKRKIMDVSMN 421
Cdd:PLN03150 503 SGRVPAAlgGRLLHRASFNFTDN 525
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
187-329 1.37e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 44.15  E-value: 1.37e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222811 187 KILKLDNFLDKLEEVTIFHANSNGFTgSVPDFSNLKFLYELDLSNNKLTgDFPTSvLKGNNLTFLDLRFNSFSGSVPPQV 266
Cdd:COG4886 216 QLTDLPEPLANLTNLETLDLSNNQLT-DLPELGNLTNLEELDLSNNQLT-DLPPL-ANLTNLKTLDLSNNQLTDLKLKEL 292

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15222811 267 FNLDLDVLFINNNNLVQKLPLNLGSITALYLTFANNRFTGPIPESIGNIKYLQEVLFLNNKLT 329
Cdd:COG4886 293 ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLL 355
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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