|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
2-952 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 727.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:PLN03210 44 FKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 82 FKKTCSGKTEEKRRRWSQALNDVGNIAGEHFLNWDNESKMMEKIARDISNKVNTTISRDFEDMVGVETHLEKIQSLLHLD 161
Cdd:PLN03210 124 FEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 162 NdDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGS-----YNSS-LDEYGLKLQLQEQLLSKILNQTGMR 235
Cdd:PLN03210 204 S-EEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISksmeiYSSAnPDDYNMKLHLQRAFLSEILDKKDIK 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 236 VYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQHdDIKNTYYVDFPTQKEARQIFC 315
Cdd:PLN03210 283 IYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAH-GIDHIYEVCLPSNELALEMFC 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 316 RYGFKQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSvdrNIERVLRVGYDGLH-EKD 394
Cdd:PLN03210 362 RSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDG---KIEKTLRVSYDGLNnKKD 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 395 QLLFLLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSggNIV-MHKLLQQVGREAVQRQ--EPWKRQILI 471
Cdd:PLN03210 439 KAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRE--DIVeMHSLLQEMGKEIVRAQsnEPGEREFLV 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 472 DAHEICNVLETDSGCANVMGISFNVSTIpNGVHISAKAFQNMRNLRFLSIYETRRD--VNLRVNVPDDMD-FPHRLRSLH 548
Cdd:PLN03210 517 DAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLFLKFYTKKWDqkKEVRWHLPEGFDyLPPKLRLLR 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 549 WEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPS 628
Cdd:PLN03210 596 WDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPS 675
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 629 SVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEM--------------- 693
Cdd:PLN03210 676 SIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFpsnlrlenldelilc 755
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 694 -LESIRLW----------------------SCLETLVVYGSVItHNFWAVTLIEKMG-TDIERIPDCIkDLPALKSLYIG 749
Cdd:PLN03210 756 eMKSEKLWervqpltplmtmlspsltrlflSDIPSLVELPSSI-QNLHKLEHLEIENcINLETLPTGI-NLESLESLDLS 833
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 750 GCPKLFSLP-----------------ELP------GSLRRLTVETCESLKTVSFPI-----------------------D 783
Cdd:PLN03210 834 GCSRLRTFPdistnisdlnlsrtgieEVPwwiekfSNLSFLDMNGCNNLQRVSLNIsklkhletvdfsdcgalteaswnG 913
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 784 SP----------------IVSFSFPNCFELGEEArrVITQKAGQMIAYLPGREIPAEFVHRAIGDSLT----IRSSFCS- 842
Cdd:PLN03210 914 SPsevamatdnihsklpsTVCINFINCFNLDQEA--LLQQQSIFKQLILSGEEVPSYFTHRTTGASLTniplLHISPCQp 991
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 843 --IFRICVVVSPKSeMKEEYVGFmcRKRINgCPIGDNL------------FKAqlrKLQAEHLFIFQ--FEFLEEDGWLE 906
Cdd:PLN03210 992 ffRFRACAVVDSES-FFIISVSF--DIQVC-CRFIDRLgnhfdspyqphvFSV---TKKGSHLVIFDccFPLNEDNAPLA 1064
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|
gi 22330404 907 QDN----EVLFKFTTSSEELDIIECGIQILTGETNRNISTYGSYESRSEQ 952
Cdd:PLN03210 1065 ELNydhvDIQFRLTNKNSQLKLKGCGIRLSEDDSSLNNTLPNVEEADDDN 1114
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
2-136 |
2.60e-56 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 191.81 E-value: 2.60e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:pfam01582 33 IDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILECALDLGQKVIPIFYEVDPSDVRKQTGSFGKA 112
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 22330404 82 FKKTCSGKTEEKRRRWSQALNDVGNIagEHFLNWDNESKMMEKIARDISNKVNTT 136
Cdd:pfam01582 113 FKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDISNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
2-107 |
7.27e-29 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 112.42 E-value: 7.27e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 2 FDDQAIERGQTISpELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCK-EDIGQIVMTVFYGVDPSDVRKQTGDILK 80
Cdd:smart00255 34 FIDDFEPGGGDLE-EIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRK 112
|
90 100
....*....|....*....|....*...
gi 22330404 81 VFKKTCSGKTE-EKRRRWSQALNDVGNI 107
Cdd:smart00255 113 VFKKNYLKWPEdEKEQFWKKALYAVPSK 140
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
566-768 |
4.10e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 72.66 E-value: 4.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 566 LVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCwSLVEIPSSVGNLHKLEELEMNLCl 645
Cdd:COG4886 69 LSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN- 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 646 QLQVVPThfNLASLRSLRMLGCW--ELRKFP-GIS--TNITSLVIGDAMLEEMLESIRLWSCLETLVVYgsvithnfwav 720
Cdd:COG4886 147 QLTDLPE--PLGNLTNLKSLDLSnnQLTDLPeELGnlTNLKELDLSNNQITDLPEPLGNLTNLEELDLS----------- 213
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 22330404 721 tliekmGTDIERIPDCIKDLPALKSLYIGGCpKLFSLPELpGSLRRLT 768
Cdd:COG4886 214 ------GNQLTDLPEPLANLTNLETLDLSNN-QLTDLPEL-GNLTNLE 253
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
171-282 |
1.80e-03 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 39.82 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 171 IYGPAGIGKTTIARALHSLLSdRFQLTCFMENLrGSYNSSLDEYGLKLQLQEQLLSKILNQTgmrvynlsaiqgmlcdQK 250
Cdd:cd00009 24 LYGPPGTGKTTLARAIANELF-RPGAPFLYLNA-SDLLEGLVVAELFGHFLVRLLFELAEKA----------------KP 85
|
90 100 110
....*....|....*....|....*....|....*...
gi 22330404 251 VLIILDDVDDL------KQLEALANETKWFGPGSRVVV 282
Cdd:cd00009 86 GVLFIDEIDSLsrgaqnALLRVLETLNDLRIDRENVRV 123
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
2-952 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 727.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:PLN03210 44 FKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 82 FKKTCSGKTEEKRRRWSQALNDVGNIAGEHFLNWDNESKMMEKIARDISNKVNTTISRDFEDMVGVETHLEKIQSLLHLD 161
Cdd:PLN03210 124 FEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 162 NdDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGS-----YNSS-LDEYGLKLQLQEQLLSKILNQTGMR 235
Cdd:PLN03210 204 S-EEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISksmeiYSSAnPDDYNMKLHLQRAFLSEILDKKDIK 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 236 VYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQHdDIKNTYYVDFPTQKEARQIFC 315
Cdd:PLN03210 283 IYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAH-GIDHIYEVCLPSNELALEMFC 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 316 RYGFKQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSvdrNIERVLRVGYDGLH-EKD 394
Cdd:PLN03210 362 RSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDG---KIEKTLRVSYDGLNnKKD 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 395 QLLFLLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSggNIV-MHKLLQQVGREAVQRQ--EPWKRQILI 471
Cdd:PLN03210 439 KAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRE--DIVeMHSLLQEMGKEIVRAQsnEPGEREFLV 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 472 DAHEICNVLETDSGCANVMGISFNVSTIpNGVHISAKAFQNMRNLRFLSIYETRRD--VNLRVNVPDDMD-FPHRLRSLH 548
Cdd:PLN03210 517 DAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLFLKFYTKKWDqkKEVRWHLPEGFDyLPPKLRLLR 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 549 WEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPS 628
Cdd:PLN03210 596 WDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPS 675
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 629 SVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEM--------------- 693
Cdd:PLN03210 676 SIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFpsnlrlenldelilc 755
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 694 -LESIRLW----------------------SCLETLVVYGSVItHNFWAVTLIEKMG-TDIERIPDCIkDLPALKSLYIG 749
Cdd:PLN03210 756 eMKSEKLWervqpltplmtmlspsltrlflSDIPSLVELPSSI-QNLHKLEHLEIENcINLETLPTGI-NLESLESLDLS 833
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 750 GCPKLFSLP-----------------ELP------GSLRRLTVETCESLKTVSFPI-----------------------D 783
Cdd:PLN03210 834 GCSRLRTFPdistnisdlnlsrtgieEVPwwiekfSNLSFLDMNGCNNLQRVSLNIsklkhletvdfsdcgalteaswnG 913
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 784 SP----------------IVSFSFPNCFELGEEArrVITQKAGQMIAYLPGREIPAEFVHRAIGDSLT----IRSSFCS- 842
Cdd:PLN03210 914 SPsevamatdnihsklpsTVCINFINCFNLDQEA--LLQQQSIFKQLILSGEEVPSYFTHRTTGASLTniplLHISPCQp 991
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 843 --IFRICVVVSPKSeMKEEYVGFmcRKRINgCPIGDNL------------FKAqlrKLQAEHLFIFQ--FEFLEEDGWLE 906
Cdd:PLN03210 992 ffRFRACAVVDSES-FFIISVSF--DIQVC-CRFIDRLgnhfdspyqphvFSV---TKKGSHLVIFDccFPLNEDNAPLA 1064
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|
gi 22330404 907 QDN----EVLFKFTTSSEELDIIECGIQILTGETNRNISTYGSYESRSEQ 952
Cdd:PLN03210 1065 ELNydhvDIQFRLTNKNSQLKLKGCGIRLSEDDSSLNNTLPNVEEADDDN 1114
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
2-136 |
2.60e-56 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 191.81 E-value: 2.60e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:pfam01582 33 IDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILECALDLGQKVIPIFYEVDPSDVRKQTGSFGKA 112
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 22330404 82 FKKTCSGKTEEKRRRWSQALNDVGNIagEHFLNWDNESKMMEKIARDISNKVNTT 136
Cdd:pfam01582 113 FKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDISNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
2-107 |
7.27e-29 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 112.42 E-value: 7.27e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 2 FDDQAIERGQTISpELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCK-EDIGQIVMTVFYGVDPSDVRKQTGDILK 80
Cdd:smart00255 34 FIDDFEPGGGDLE-EIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRK 112
|
90 100
....*....|....*....|....*...
gi 22330404 81 VFKKTCSGKTE-EKRRRWSQALNDVGNI 107
Cdd:smart00255 113 VFKKNYLKWPEdEKEQFWKKALYAVPSK 140
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
147-385 |
9.90e-20 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 89.75 E-value: 9.90e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 147 VETHLEKIQSllHLDNDDEAMIVGIYGPAGIGKTTIARAL---HSLLSDRFQLT--CFMENLRGSYNSSLDEYGLKLQLQ 221
Cdd:pfam00931 1 REDMVEKVIG--KLSEKDEPGIVGIHGMGGVGKTTLAAQIfndFDEVEGHFDSVawVVVSKTFTISTLQQTILQNLGLSE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 222 EQLLSKILNQTGMRVYNLsaiqgmLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQHDDIKNTYY 301
Cdd:pfam00931 79 DDWDNKEEGELARKIRRA------LLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGGPSDPHE 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 302 VDFPTQKEARQIFCRYGF-KQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLR-KKTEDDWEDILHRLESSFDSVDRNI 379
Cdd:pfam00931 153 VELLEPDEAWELFENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLScKKTVEEWKHVYDVLQSELKSNSYSL 232
|
....*.
gi 22330404 380 ERVLRV 385
Cdd:pfam00931 233 NSVRSI 238
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
566-768 |
4.10e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 72.66 E-value: 4.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 566 LVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCwSLVEIPSSVGNLHKLEELEMNLCl 645
Cdd:COG4886 69 LSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN- 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 646 QLQVVPThfNLASLRSLRMLGCW--ELRKFP-GIS--TNITSLVIGDAMLEEMLESIRLWSCLETLVVYgsvithnfwav 720
Cdd:COG4886 147 QLTDLPE--PLGNLTNLKSLDLSnnQLTDLPeELGnlTNLKELDLSNNQITDLPEPLGNLTNLEELDLS----------- 213
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 22330404 721 tliekmGTDIERIPDCIKDLPALKSLYIGGCpKLFSLPELpGSLRRLT 768
Cdd:COG4886 214 ------GNQLTDLPEPLANLTNLETLDLSNN-QLTDLPEL-GNLTNLE 253
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
566-768 |
1.01e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 71.12 E-value: 1.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 566 LVELNLQNNKLEKLWEGTQPLTNLNKLELCGSlRLKELPD-LSSATNLKRLDLTGCwSLVEIPSSVGNLHKLEELEMNLC 644
Cdd:COG4886 115 LESLDLSGNQLTDLPEELANLTNLKELDLSNN-QLTDLPEpLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLSNN 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 645 lQLQVVPTHfnLASLRSLRMLGCWelrkfpgiSTNITSLvigDAMLEEM--LESIRLWscletlvvygsvithnfwavtl 722
Cdd:COG4886 193 -QITDLPEP--LGNLTNLEELDLS--------GNQLTDL---PEPLANLtnLETLDLS---------------------- 236
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 22330404 723 iekmGTDIERIPDcIKDLPALKSLYIGGCpKLFSLPELpGSLRRLT 768
Cdd:COG4886 237 ----NNQLTDLPE-LGNLTNLEELDLSNN-QLTDLPPL-ANLTNLK 275
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
492-659 |
3.53e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 56.87 E-value: 3.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 492 ISFN-VSTIPngvhisaKAFQNMRNLRFLSIYETRRDvnlrvnvpddmDFPHRLRSLhwevypgkslpstfrpEYLVELN 570
Cdd:COG4886 166 LSNNqLTDLP-------EELGNLTNLKELDLSNNQIT-----------DLPEPLGNL----------------TNLEELD 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 571 LQNNKLEKLWEGTQPLTNLNKLELCGSlRLKELPDLSSATNLKRLDLTGCWsLVEIPSSvGNLHKLEELEMNLC----LQ 646
Cdd:COG4886 212 LSGNQLTDLPEPLANLTNLETLDLSNN-QLTDLPELGNLTNLEELDLSNNQ-LTDLPPL-ANLTNLKTLDLSNNqltdLK 288
|
170
....*....|...
gi 22330404 647 LQVVPTHFNLASL 659
Cdd:COG4886 289 LKELELLLGLNSL 301
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
2-59 |
7.67e-07 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 48.85 E-value: 7.67e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 22330404 2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIV 59
Cdd:pfam13676 29 LDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALADPEGRKRLI 86
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
565-584 |
4.84e-06 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 43.87 E-value: 4.84e-06
|
| AAA_16 |
pfam13191 |
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ... |
145-270 |
6.36e-05 |
|
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.
Pssm-ID: 433025 [Multi-domain] Cd Length: 167 Bit Score: 44.42 E-value: 6.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 145 VGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDR---FQLTCFMEN------------------- 202
Cdd:pfam13191 3 VGREEELEQLLDALDRVRSGRPPSVLLTGEAGTGKTTLLRELLRALERDggyFLRGKCDENlpyspllealtregllrql 82
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 22330404 203 LRGSYNSSLDEYGLKLQLQEQLLSKILNQTGMRVYNL--SAIQGMLCDQK-VLIILDDVD-----DLKQLEALANE 270
Cdd:pfam13191 83 LDELESSLLEAWRAALLEALAPVPELPGDLAERLLDLllRLLDLLARGERpLVLVLDDLQwadeaSLQLLAALLRL 158
|
|
| ATPase_2 |
pfam01637 |
ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is ... |
154-274 |
1.15e-03 |
|
ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is involved in binding ATP. There are eukaryote members as well as archaeal members in this family.
Pssm-ID: 376582 [Multi-domain] Cd Length: 222 Bit Score: 41.54 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 154 IQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGSYNSSLDEYGLKLQLQEQLLSKILNQTG 233
Cdd:pfam01637 8 LKELEEWAERGPNLIYVIYGPEGCGKTALLRESIENLLDLGYYVIYYDPLRRYFISKLDRFEEVRRLAEALGIAVPKAEL 87
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 22330404 234 MRVYNL-SAIQGMLCD-----QKVLIILDDVDDLKQLEALANETKWF 274
Cdd:pfam01637 88 EESKLAfLAIELLLEAlkrrgKKIAIIIDEVQQAIGLNGAELLVKEL 134
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
171-282 |
1.80e-03 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 39.82 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 171 IYGPAGIGKTTIARALHSLLSdRFQLTCFMENLrGSYNSSLDEYGLKLQLQEQLLSKILNQTgmrvynlsaiqgmlcdQK 250
Cdd:cd00009 24 LYGPPGTGKTTLARAIANELF-RPGAPFLYLNA-SDLLEGLVVAELFGHFLVRLLFELAEKA----------------KP 85
|
90 100 110
....*....|....*....|....*....|....*...
gi 22330404 251 VLIILDDVDDL------KQLEALANETKWFGPGSRVVV 282
Cdd:cd00009 86 GVLFIDEIDSLsrgaqnALLRVLETLNDLRIDRENVRV 123
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
168-270 |
4.36e-03 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 38.89 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 168 IVGIYGPAGIGKTTIARALHSLL--SDRFQLTCFMENLRgsynsslDEYGLKLQLQEQLLSKILNQTGMRVYNlsAIQGM 245
Cdd:smart00382 4 VILIVGPPGSGKTTLARALARELgpPGGGVIYIDGEDIL-------EEVLDQLLLIIVGGKKASGSGELRLRL--ALALA 74
|
90 100
....*....|....*....|....*
gi 22330404 246 LCDQKVLIILDDVDDLKQLEALANE 270
Cdd:smart00382 75 RKLKPDVLILDEITSLLDAEQEALL 99
|
|
| ExeA |
COG3267 |
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, ... |
136-196 |
5.15e-03 |
|
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 442498 [Multi-domain] Cd Length: 261 Bit Score: 39.77 E-value: 5.15e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22330404 136 TISRDFEDMVGVETHLEKIQSLLHLDNDDEAMIVgIYGPAGIGKTTIARALHSLLSDRFQL 196
Cdd:COG3267 14 SLTPDPRFLFLSPSHREALARLEYALAQGGGFVV-LTGEVGTGKTTLLRRLLERLPDDVKV 73
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
566-608 |
5.75e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 35.68 E-value: 5.75e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 22330404 566 LVELNLQNNKLEKLwEGTQPLTNLNKLELCGSLRLKELPDLSS 608
Cdd:pfam12799 3 LEVLDLSNNQITDI-PPLAKLPNLETLDLSGNNKITDLSDLAN 44
|
|
| COG4928 |
COG4928 |
Predicted P-loop ATPase, KAP-like [General function prediction only]; |
142-193 |
8.08e-03 |
|
Predicted P-loop ATPase, KAP-like [General function prediction only];
Pssm-ID: 443956 Cd Length: 386 Bit Score: 39.89 E-value: 8.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 22330404 142 EDMVGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDR 193
Cdd:COG4928 5 EDLLGRKKYAESLANLIKSSDADEPLVIGLDGEWGSGKTSFLNLIEKELESN 56
|
|
|