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Conserved domains on  [gi|22330404|ref|NP_176561|]
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Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

disease resistance family protein( domain architecture ID 1000118)

disease resistance family protein similar to Nicotiana glutinosa TMV resistance protein N; resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein

Gene Ontology:  GO:0006952

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
2-952 0e+00

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 727.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404     2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:PLN03210   44 FKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEA 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404    82 FKKTCSGKTEEKRRRWSQALNDVGNIAGEHFLNWDNESKMMEKIARDISNKVNTTISRDFEDMVGVETHLEKIQSLLHLD 161
Cdd:PLN03210  124 FEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLE 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   162 NdDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGS-----YNSS-LDEYGLKLQLQEQLLSKILNQTGMR 235
Cdd:PLN03210  204 S-EEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISksmeiYSSAnPDDYNMKLHLQRAFLSEILDKKDIK 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   236 VYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQHdDIKNTYYVDFPTQKEARQIFC 315
Cdd:PLN03210  283 IYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAH-GIDHIYEVCLPSNELALEMFC 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   316 RYGFKQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSvdrNIERVLRVGYDGLH-EKD 394
Cdd:PLN03210  362 RSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDG---KIEKTLRVSYDGLNnKKD 438
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   395 QLLFLLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSggNIV-MHKLLQQVGREAVQRQ--EPWKRQILI 471
Cdd:PLN03210  439 KAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRE--DIVeMHSLLQEMGKEIVRAQsnEPGEREFLV 516
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   472 DAHEICNVLETDSGCANVMGISFNVSTIpNGVHISAKAFQNMRNLRFLSIYETRRD--VNLRVNVPDDMD-FPHRLRSLH 548
Cdd:PLN03210  517 DAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLFLKFYTKKWDqkKEVRWHLPEGFDyLPPKLRLLR 595
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   549 WEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPS 628
Cdd:PLN03210  596 WDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPS 675
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   629 SVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEM--------------- 693
Cdd:PLN03210  676 SIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFpsnlrlenldelilc 755
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   694 -LESIRLW----------------------SCLETLVVYGSVItHNFWAVTLIEKMG-TDIERIPDCIkDLPALKSLYIG 749
Cdd:PLN03210  756 eMKSEKLWervqpltplmtmlspsltrlflSDIPSLVELPSSI-QNLHKLEHLEIENcINLETLPTGI-NLESLESLDLS 833
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   750 GCPKLFSLP-----------------ELP------GSLRRLTVETCESLKTVSFPI-----------------------D 783
Cdd:PLN03210  834 GCSRLRTFPdistnisdlnlsrtgieEVPwwiekfSNLSFLDMNGCNNLQRVSLNIsklkhletvdfsdcgalteaswnG 913
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   784 SP----------------IVSFSFPNCFELGEEArrVITQKAGQMIAYLPGREIPAEFVHRAIGDSLT----IRSSFCS- 842
Cdd:PLN03210  914 SPsevamatdnihsklpsTVCINFINCFNLDQEA--LLQQQSIFKQLILSGEEVPSYFTHRTTGASLTniplLHISPCQp 991
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   843 --IFRICVVVSPKSeMKEEYVGFmcRKRINgCPIGDNL------------FKAqlrKLQAEHLFIFQ--FEFLEEDGWLE 906
Cdd:PLN03210  992 ffRFRACAVVDSES-FFIISVSF--DIQVC-CRFIDRLgnhfdspyqphvFSV---TKKGSHLVIFDccFPLNEDNAPLA 1064
                        1050      1060      1070      1080      1090
                  ....*....|....*....|....*....|....*....|....*....|
gi 22330404   907 QDN----EVLFKFTTSSEELDIIECGIQILTGETNRNISTYGSYESRSEQ 952
Cdd:PLN03210 1065 ELNydhvDIQFRLTNKNSQLKLKGCGIRLSEDDSSLNNTLPNVEEADDDN 1114
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
2-952 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 727.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404     2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:PLN03210   44 FKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEA 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404    82 FKKTCSGKTEEKRRRWSQALNDVGNIAGEHFLNWDNESKMMEKIARDISNKVNTTISRDFEDMVGVETHLEKIQSLLHLD 161
Cdd:PLN03210  124 FEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLE 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   162 NdDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGS-----YNSS-LDEYGLKLQLQEQLLSKILNQTGMR 235
Cdd:PLN03210  204 S-EEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISksmeiYSSAnPDDYNMKLHLQRAFLSEILDKKDIK 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   236 VYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQHdDIKNTYYVDFPTQKEARQIFC 315
Cdd:PLN03210  283 IYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAH-GIDHIYEVCLPSNELALEMFC 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   316 RYGFKQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSvdrNIERVLRVGYDGLH-EKD 394
Cdd:PLN03210  362 RSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDG---KIEKTLRVSYDGLNnKKD 438
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   395 QLLFLLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSggNIV-MHKLLQQVGREAVQRQ--EPWKRQILI 471
Cdd:PLN03210  439 KAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRE--DIVeMHSLLQEMGKEIVRAQsnEPGEREFLV 516
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   472 DAHEICNVLETDSGCANVMGISFNVSTIpNGVHISAKAFQNMRNLRFLSIYETRRD--VNLRVNVPDDMD-FPHRLRSLH 548
Cdd:PLN03210  517 DAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLFLKFYTKKWDqkKEVRWHLPEGFDyLPPKLRLLR 595
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   549 WEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPS 628
Cdd:PLN03210  596 WDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPS 675
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   629 SVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEM--------------- 693
Cdd:PLN03210  676 SIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFpsnlrlenldelilc 755
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   694 -LESIRLW----------------------SCLETLVVYGSVItHNFWAVTLIEKMG-TDIERIPDCIkDLPALKSLYIG 749
Cdd:PLN03210  756 eMKSEKLWervqpltplmtmlspsltrlflSDIPSLVELPSSI-QNLHKLEHLEIENcINLETLPTGI-NLESLESLDLS 833
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   750 GCPKLFSLP-----------------ELP------GSLRRLTVETCESLKTVSFPI-----------------------D 783
Cdd:PLN03210  834 GCSRLRTFPdistnisdlnlsrtgieEVPwwiekfSNLSFLDMNGCNNLQRVSLNIsklkhletvdfsdcgalteaswnG 913
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   784 SP----------------IVSFSFPNCFELGEEArrVITQKAGQMIAYLPGREIPAEFVHRAIGDSLT----IRSSFCS- 842
Cdd:PLN03210  914 SPsevamatdnihsklpsTVCINFINCFNLDQEA--LLQQQSIFKQLILSGEEVPSYFTHRTTGASLTniplLHISPCQp 991
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   843 --IFRICVVVSPKSeMKEEYVGFmcRKRINgCPIGDNL------------FKAqlrKLQAEHLFIFQ--FEFLEEDGWLE 906
Cdd:PLN03210  992 ffRFRACAVVDSES-FFIISVSF--DIQVC-CRFIDRLgnhfdspyqphvFSV---TKKGSHLVIFDccFPLNEDNAPLA 1064
                        1050      1060      1070      1080      1090
                  ....*....|....*....|....*....|....*....|....*....|
gi 22330404   907 QDN----EVLFKFTTSSEELDIIECGIQILTGETNRNISTYGSYESRSEQ 952
Cdd:PLN03210 1065 ELNydhvDIQFRLTNKNSQLKLKGCGIRLSEDDSSLNNTLPNVEEADDDN 1114
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
2-136 2.60e-56

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 191.81  E-value: 2.60e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404     2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:pfam01582  33 IDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILECALDLGQKVIPIFYEVDPSDVRKQTGSFGKA 112
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 22330404    82 FKKTCSGKTEEKRRRWSQALNDVGNIagEHFLNWDNESKMMEKIARDISNKVNTT 136
Cdd:pfam01582 113 FKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDISNKLNGT 165
TIR smart00255
Toll - interleukin 1 - resistance;
2-107 7.27e-29

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 112.42  E-value: 7.27e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404      2 FDDQAIERGQTISpELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCK-EDIGQIVMTVFYGVDPSDVRKQTGDILK 80
Cdd:smart00255  34 FIDDFEPGGGDLE-EIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRK 112
                           90       100
                   ....*....|....*....|....*...
gi 22330404     81 VFKKTCSGKTE-EKRRRWSQALNDVGNI 107
Cdd:smart00255 113 VFKKNYLKWPEdEKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
566-768 4.10e-13

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 72.66  E-value: 4.10e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 566 LVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCwSLVEIPSSVGNLHKLEELEMNLCl 645
Cdd:COG4886  69 LSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN- 146
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 646 QLQVVPThfNLASLRSLRMLGCW--ELRKFP-GIS--TNITSLVIGDAMLEEMLESIRLWSCLETLVVYgsvithnfwav 720
Cdd:COG4886 147 QLTDLPE--PLGNLTNLKSLDLSnnQLTDLPeELGnlTNLKELDLSNNQITDLPEPLGNLTNLEELDLS----------- 213
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 22330404 721 tliekmGTDIERIPDCIKDLPALKSLYIGGCpKLFSLPELpGSLRRLT 768
Cdd:COG4886 214 ------GNQLTDLPEPLANLTNLETLDLSNN-QLTDLPEL-GNLTNLE 253
AAA cd00009
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ...
171-282 1.80e-03

The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.


Pssm-ID: 99707 [Multi-domain]  Cd Length: 151  Bit Score: 39.82  E-value: 1.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 171 IYGPAGIGKTTIARALHSLLSdRFQLTCFMENLrGSYNSSLDEYGLKLQLQEQLLSKILNQTgmrvynlsaiqgmlcdQK 250
Cdd:cd00009  24 LYGPPGTGKTTLARAIANELF-RPGAPFLYLNA-SDLLEGLVVAELFGHFLVRLLFELAEKA----------------KP 85
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22330404 251 VLIILDDVDDL------KQLEALANETKWFGPGSRVVV 282
Cdd:cd00009  86 GVLFIDEIDSLsrgaqnALLRVLETLNDLRIDRENVRV 123
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
2-952 0e+00

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 727.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404     2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:PLN03210   44 FKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEA 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404    82 FKKTCSGKTEEKRRRWSQALNDVGNIAGEHFLNWDNESKMMEKIARDISNKVNTTISRDFEDMVGVETHLEKIQSLLHLD 161
Cdd:PLN03210  124 FEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLE 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   162 NdDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGS-----YNSS-LDEYGLKLQLQEQLLSKILNQTGMR 235
Cdd:PLN03210  204 S-EEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISksmeiYSSAnPDDYNMKLHLQRAFLSEILDKKDIK 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   236 VYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQHdDIKNTYYVDFPTQKEARQIFC 315
Cdd:PLN03210  283 IYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAH-GIDHIYEVCLPSNELALEMFC 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   316 RYGFKQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSvdrNIERVLRVGYDGLH-EKD 394
Cdd:PLN03210  362 RSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDG---KIEKTLRVSYDGLNnKKD 438
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   395 QLLFLLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSggNIV-MHKLLQQVGREAVQRQ--EPWKRQILI 471
Cdd:PLN03210  439 KAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRE--DIVeMHSLLQEMGKEIVRAQsnEPGEREFLV 516
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   472 DAHEICNVLETDSGCANVMGISFNVSTIpNGVHISAKAFQNMRNLRFLSIYETRRD--VNLRVNVPDDMD-FPHRLRSLH 548
Cdd:PLN03210  517 DAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLFLKFYTKKWDqkKEVRWHLPEGFDyLPPKLRLLR 595
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   549 WEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPS 628
Cdd:PLN03210  596 WDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPS 675
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   629 SVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEM--------------- 693
Cdd:PLN03210  676 SIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFpsnlrlenldelilc 755
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   694 -LESIRLW----------------------SCLETLVVYGSVItHNFWAVTLIEKMG-TDIERIPDCIkDLPALKSLYIG 749
Cdd:PLN03210  756 eMKSEKLWervqpltplmtmlspsltrlflSDIPSLVELPSSI-QNLHKLEHLEIENcINLETLPTGI-NLESLESLDLS 833
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   750 GCPKLFSLP-----------------ELP------GSLRRLTVETCESLKTVSFPI-----------------------D 783
Cdd:PLN03210  834 GCSRLRTFPdistnisdlnlsrtgieEVPwwiekfSNLSFLDMNGCNNLQRVSLNIsklkhletvdfsdcgalteaswnG 913
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   784 SP----------------IVSFSFPNCFELGEEArrVITQKAGQMIAYLPGREIPAEFVHRAIGDSLT----IRSSFCS- 842
Cdd:PLN03210  914 SPsevamatdnihsklpsTVCINFINCFNLDQEA--LLQQQSIFKQLILSGEEVPSYFTHRTTGASLTniplLHISPCQp 991
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   843 --IFRICVVVSPKSeMKEEYVGFmcRKRINgCPIGDNL------------FKAqlrKLQAEHLFIFQ--FEFLEEDGWLE 906
Cdd:PLN03210  992 ffRFRACAVVDSES-FFIISVSF--DIQVC-CRFIDRLgnhfdspyqphvFSV---TKKGSHLVIFDccFPLNEDNAPLA 1064
                        1050      1060      1070      1080      1090
                  ....*....|....*....|....*....|....*....|....*....|
gi 22330404   907 QDN----EVLFKFTTSSEELDIIECGIQILTGETNRNISTYGSYESRSEQ 952
Cdd:PLN03210 1065 ELNydhvDIQFRLTNKNSQLKLKGCGIRLSEDDSSLNNTLPNVEEADDDN 1114
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
2-136 2.60e-56

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 191.81  E-value: 2.60e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404     2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKV 81
Cdd:pfam01582  33 IDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILECALDLGQKVIPIFYEVDPSDVRKQTGSFGKA 112
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 22330404    82 FKKTCSGKTEEKRRRWSQALNDVGNIagEHFLNWDNESKMMEKIARDISNKVNTT 136
Cdd:pfam01582 113 FKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDISNKLNGT 165
TIR smart00255
Toll - interleukin 1 - resistance;
2-107 7.27e-29

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 112.42  E-value: 7.27e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404      2 FDDQAIERGQTISpELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCK-EDIGQIVMTVFYGVDPSDVRKQTGDILK 80
Cdd:smart00255  34 FIDDFEPGGGDLE-EIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRK 112
                           90       100
                   ....*....|....*....|....*...
gi 22330404     81 VFKKTCSGKTE-EKRRRWSQALNDVGNI 107
Cdd:smart00255 113 VFKKNYLKWPEdEKEQFWKKALYAVPSK 140
NB-ARC pfam00931
NB-ARC domain;
147-385 9.90e-20

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 89.75  E-value: 9.90e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   147 VETHLEKIQSllHLDNDDEAMIVGIYGPAGIGKTTIARAL---HSLLSDRFQLT--CFMENLRGSYNSSLDEYGLKLQLQ 221
Cdd:pfam00931   1 REDMVEKVIG--KLSEKDEPGIVGIHGMGGVGKTTLAAQIfndFDEVEGHFDSVawVVVSKTFTISTLQQTILQNLGLSE 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   222 EQLLSKILNQTGMRVYNLsaiqgmLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQHDDIKNTYY 301
Cdd:pfam00931  79 DDWDNKEEGELARKIRRA------LLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGGPSDPHE 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   302 VDFPTQKEARQIFCRYGF-KQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLR-KKTEDDWEDILHRLESSFDSVDRNI 379
Cdd:pfam00931 153 VELLEPDEAWELFENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLScKKTVEEWKHVYDVLQSELKSNSYSL 232

                  ....*.
gi 22330404   380 ERVLRV 385
Cdd:pfam00931 233 NSVRSI 238
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
566-768 4.10e-13

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 72.66  E-value: 4.10e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 566 LVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCwSLVEIPSSVGNLHKLEELEMNLCl 645
Cdd:COG4886  69 LSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN- 146
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 646 QLQVVPThfNLASLRSLRMLGCW--ELRKFP-GIS--TNITSLVIGDAMLEEMLESIRLWSCLETLVVYgsvithnfwav 720
Cdd:COG4886 147 QLTDLPE--PLGNLTNLKSLDLSnnQLTDLPeELGnlTNLKELDLSNNQITDLPEPLGNLTNLEELDLS----------- 213
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 22330404 721 tliekmGTDIERIPDCIKDLPALKSLYIGGCpKLFSLPELpGSLRRLT 768
Cdd:COG4886 214 ------GNQLTDLPEPLANLTNLETLDLSNN-QLTDLPEL-GNLTNLE 253
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
566-768 1.01e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 71.12  E-value: 1.01e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 566 LVELNLQNNKLEKLWEGTQPLTNLNKLELCGSlRLKELPD-LSSATNLKRLDLTGCwSLVEIPSSVGNLHKLEELEMNLC 644
Cdd:COG4886 115 LESLDLSGNQLTDLPEELANLTNLKELDLSNN-QLTDLPEpLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLSNN 192
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 645 lQLQVVPTHfnLASLRSLRMLGCWelrkfpgiSTNITSLvigDAMLEEM--LESIRLWscletlvvygsvithnfwavtl 722
Cdd:COG4886 193 -QITDLPEP--LGNLTNLEELDLS--------GNQLTDL---PEPLANLtnLETLDLS---------------------- 236
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 22330404 723 iekmGTDIERIPDcIKDLPALKSLYIGGCpKLFSLPELpGSLRRLT 768
Cdd:COG4886 237 ----NNQLTDLPE-LGNLTNLEELDLSNN-QLTDLPPL-ANLTNLK 275
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
492-659 3.53e-08

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 56.87  E-value: 3.53e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 492 ISFN-VSTIPngvhisaKAFQNMRNLRFLSIYETRRDvnlrvnvpddmDFPHRLRSLhwevypgkslpstfrpEYLVELN 570
Cdd:COG4886 166 LSNNqLTDLP-------EELGNLTNLKELDLSNNQIT-----------DLPEPLGNL----------------TNLEELD 211
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 571 LQNNKLEKLWEGTQPLTNLNKLELCGSlRLKELPDLSSATNLKRLDLTGCWsLVEIPSSvGNLHKLEELEMNLC----LQ 646
Cdd:COG4886 212 LSGNQLTDLPEPLANLTNLETLDLSNN-QLTDLPELGNLTNLEELDLSNNQ-LTDLPPL-ANLTNLKTLDLSNNqltdLK 288
                       170
                ....*....|...
gi 22330404 647 LQVVPTHFNLASL 659
Cdd:COG4886 289 LKELELLLGLNSL 301
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
2-59 7.67e-07

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 48.85  E-value: 7.67e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 22330404     2 FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIV 59
Cdd:pfam13676  29 LDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALADPEGRKRLI 86
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
565-584 4.84e-06

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 43.87  E-value: 4.84e-06
                          10        20
                  ....*....|....*....|
gi 22330404   565 YLVELNLQNNKLEKLWEGTQ 584
Cdd:pfam07725   1 NLVELNMPYSKLEKLWEGVK 20
AAA_16 pfam13191
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ...
145-270 6.36e-05

AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.


Pssm-ID: 433025 [Multi-domain]  Cd Length: 167  Bit Score: 44.42  E-value: 6.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   145 VGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDR---FQLTCFMEN------------------- 202
Cdd:pfam13191   3 VGREEELEQLLDALDRVRSGRPPSVLLTGEAGTGKTTLLRELLRALERDggyFLRGKCDENlpyspllealtregllrql 82
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 22330404   203 LRGSYNSSLDEYGLKLQLQEQLLSKILNQTGMRVYNL--SAIQGMLCDQK-VLIILDDVD-----DLKQLEALANE 270
Cdd:pfam13191  83 LDELESSLLEAWRAALLEALAPVPELPGDLAERLLDLllRLLDLLARGERpLVLVLDDLQwadeaSLQLLAALLRL 158
ATPase_2 pfam01637
ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is ...
154-274 1.15e-03

ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is involved in binding ATP. There are eukaryote members as well as archaeal members in this family.


Pssm-ID: 376582 [Multi-domain]  Cd Length: 222  Bit Score: 41.54  E-value: 1.15e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404   154 IQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGSYNSSLDEYGLKLQLQEQLLSKILNQTG 233
Cdd:pfam01637   8 LKELEEWAERGPNLIYVIYGPEGCGKTALLRESIENLLDLGYYVIYYDPLRRYFISKLDRFEEVRRLAEALGIAVPKAEL 87
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 22330404   234 MRVYNL-SAIQGMLCD-----QKVLIILDDVDDLKQLEALANETKWF 274
Cdd:pfam01637  88 EESKLAfLAIELLLEAlkrrgKKIAIIIDEVQQAIGLNGAELLVKEL 134
AAA cd00009
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ...
171-282 1.80e-03

The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.


Pssm-ID: 99707 [Multi-domain]  Cd Length: 151  Bit Score: 39.82  E-value: 1.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404 171 IYGPAGIGKTTIARALHSLLSdRFQLTCFMENLrGSYNSSLDEYGLKLQLQEQLLSKILNQTgmrvynlsaiqgmlcdQK 250
Cdd:cd00009  24 LYGPPGTGKTTLARAIANELF-RPGAPFLYLNA-SDLLEGLVVAELFGHFLVRLLFELAEKA----------------KP 85
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22330404 251 VLIILDDVDDL------KQLEALANETKWFGPGSRVVV 282
Cdd:cd00009  86 GVLFIDEIDSLsrgaqnALLRVLETLNDLRIDRENVRV 123
AAA smart00382
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ...
168-270 4.36e-03

ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.


Pssm-ID: 214640 [Multi-domain]  Cd Length: 148  Bit Score: 38.89  E-value: 4.36e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330404    168 IVGIYGPAGIGKTTIARALHSLL--SDRFQLTCFMENLRgsynsslDEYGLKLQLQEQLLSKILNQTGMRVYNlsAIQGM 245
Cdd:smart00382   4 VILIVGPPGSGKTTLARALARELgpPGGGVIYIDGEDIL-------EEVLDQLLLIIVGGKKASGSGELRLRL--ALALA 74
                           90       100
                   ....*....|....*....|....*
gi 22330404    246 LCDQKVLIILDDVDDLKQLEALANE 270
Cdd:smart00382  75 RKLKPDVLILDEITSLLDAEQEALL 99
ExeA COG3267
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, ...
136-196 5.15e-03

Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 442498 [Multi-domain]  Cd Length: 261  Bit Score: 39.77  E-value: 5.15e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22330404 136 TISRDFEDMVGVETHLEKIQSLLHLDNDDEAMIVgIYGPAGIGKTTIARALHSLLSDRFQL 196
Cdd:COG3267  14 SLTPDPRFLFLSPSHREALARLEYALAQGGGFVV-LTGEVGTGKTTLLRRLLERLPDDVKV 73
LRR_4 pfam12799
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ...
566-608 5.75e-03

Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.


Pssm-ID: 463713 [Multi-domain]  Cd Length: 44  Bit Score: 35.68  E-value: 5.75e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 22330404   566 LVELNLQNNKLEKLwEGTQPLTNLNKLELCGSLRLKELPDLSS 608
Cdd:pfam12799   3 LEVLDLSNNQITDI-PPLAKLPNLETLDLSGNNKITDLSDLAN 44
COG4928 COG4928
Predicted P-loop ATPase, KAP-like [General function prediction only];
142-193 8.08e-03

Predicted P-loop ATPase, KAP-like [General function prediction only];


Pssm-ID: 443956  Cd Length: 386  Bit Score: 39.89  E-value: 8.08e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 22330404 142 EDMVGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDR 193
Cdd:COG4928   5 EDLLGRKKYAESLANLIKSSDADEPLVIGLDGEWGSGKTSFLNLIEKELESN 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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