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Conserved domains on  [gi|15222452|ref|NP_177136|]
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Homeobox-leucine zipper protein family [Arabidopsis thaliana]

Protein Classification

homeobox-leucine zipper protein( domain architecture ID 11079011)

homeobox-leucine zipper protein is a transcription factor that may function in plant development and/or in stress adaptation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Homeodomain pfam00046
Homeodomain;
85-138 2.06e-17

Homeodomain;


:

Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 74.46  E-value: 2.06e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 15222452    85 KKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 138
Cdd:pfam00046   1 RRKRttFTPEQLEELEKEFQENPYPSAEEREELAAQLGLTERQVKVWFQNRRAKWK 56
HALZ pfam02183
Homeobox associated leucine zipper;
140-181 6.72e-17

Homeobox associated leucine zipper;


:

Pssm-ID: 460477 [Multi-domain]  Cd Length: 42  Bit Score: 72.55  E-value: 6.72e-17
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 15222452   140 KQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNRE 181
Cdd:pfam02183   1 KQLERDYDVLKASYDALKSDFDSLKKENQKLQAELQELKEKL 42
 
Name Accession Description Interval E-value
Homeodomain pfam00046
Homeodomain;
85-138 2.06e-17

Homeodomain;


Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 74.46  E-value: 2.06e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 15222452    85 KKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 138
Cdd:pfam00046   1 RRKRttFTPEQLEELEKEFQENPYPSAEEREELAAQLGLTERQVKVWFQNRRAKWK 56
HALZ pfam02183
Homeobox associated leucine zipper;
140-181 6.72e-17

Homeobox associated leucine zipper;


Pssm-ID: 460477 [Multi-domain]  Cd Length: 42  Bit Score: 72.55  E-value: 6.72e-17
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 15222452   140 KQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNRE 181
Cdd:pfam02183   1 KQLERDYDVLKASYDALKSDFDSLKKENQKLQAELQELKEKL 42
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 85-138 3.67e-16

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 71.13  E-value: 3.67e-16
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 15222452     85 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 138
Cdd:smart00389   4 KRTSFTPEQLEELEKEFQKNPYPSREEREELAKKLGLSERQVKVWFQNRRAKWK 57
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 85-141 7.79e-16

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 70.35  E-value: 7.79e-16
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 15222452  85 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQ 141
Cdd:cd00086   3 KRTRFTPEQLEELEKEFEKNPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
COG5576 COG5576
Homeodomain-containing transcription factor [Transcription];
62-152 3.46e-08

Homeodomain-containing transcription factor [Transcription];


Pssm-ID: 227863 [Multi-domain]  Cd Length: 156  Bit Score: 51.67  E-value: 3.46e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222452  62 DLETGNNMNGEEDYSddGSQMGE-----KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRAR 136
Cdd:COG5576  28 NKREVEAADSEMKLE--RKQDGSsppksKRRRTTDEQLMVLEREFEINPYPSSITRIKLSLLLNMPPKSVQIWFQNKRAK 105

                        90
                ....*....|....*.
gi 15222452 137 WKTKQLEKDYDTLKRQ 152
Cdd:COG5576 106 EKKKRSGKVEQRPGEE 121
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
145-179 4.35e-03

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 36.01  E-value: 4.35e-03
                        10        20        30
                ....*....|....*....|....*....|....*
gi 15222452 145 DYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKN 179
Cdd:COG2919  30 AYRELRQEIAELEAENAKLKARNAELEAEVADLKD 64
 
Name Accession Description Interval E-value
Homeodomain pfam00046
Homeodomain;
85-138 2.06e-17

Homeodomain;


Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 74.46  E-value: 2.06e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 15222452    85 KKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 138
Cdd:pfam00046   1 RRKRttFTPEQLEELEKEFQENPYPSAEEREELAAQLGLTERQVKVWFQNRRAKWK 56
HALZ pfam02183
Homeobox associated leucine zipper;
140-181 6.72e-17

Homeobox associated leucine zipper;


Pssm-ID: 460477 [Multi-domain]  Cd Length: 42  Bit Score: 72.55  E-value: 6.72e-17
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 15222452   140 KQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNRE 181
Cdd:pfam02183   1 KQLERDYDVLKASYDALKSDFDSLKKENQKLQAELQELKEKL 42
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 85-138 3.67e-16

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 71.13  E-value: 3.67e-16
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 15222452     85 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 138
Cdd:smart00389   4 KRTSFTPEQLEELEKEFQKNPYPSREEREELAKKLGLSERQVKVWFQNRRAKWK 57
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 85-141 7.79e-16

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 70.35  E-value: 7.79e-16
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 15222452  85 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQ 141
Cdd:cd00086   3 KRTRFTPEQLEELEKEFEKNPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
COG5576 COG5576
Homeodomain-containing transcription factor [Transcription];
62-152 3.46e-08

Homeodomain-containing transcription factor [Transcription];


Pssm-ID: 227863 [Multi-domain]  Cd Length: 156  Bit Score: 51.67  E-value: 3.46e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15222452  62 DLETGNNMNGEEDYSddGSQMGE-----KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRAR 136
Cdd:COG5576  28 NKREVEAADSEMKLE--RKQDGSsppksKRRRTTDEQLMVLEREFEINPYPSSITRIKLSLLLNMPPKSVQIWFQNKRAK 105

                        90
                ....*....|....*.
gi 15222452 137 WKTKQLEKDYDTLKRQ 152
Cdd:COG5576 106 EKKKRSGKVEQRPGEE 121
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
145-179 4.35e-03

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 36.01  E-value: 4.35e-03
                        10        20        30
                ....*....|....*....|....*....|....*
gi 15222452 145 DYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKN 179
Cdd:COG2919  30 AYRELRQEIAELEAENAKLKARNAELEAEVADLKD 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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