NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15223064|ref|NP_177171|]
View 

formin 8 [Arabidopsis thaliana]

Protein Classification

FH2 domain-containing protein( domain architecture ID 10490182)

FH2 domain-containing protein similar to formin homology proteins that control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarization

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
302-707 6.08e-123

Formin Homology 2 Domain;


:

Pssm-ID: 396655  Cd Length: 372  Bit Score: 372.76  E-value: 6.08e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   302 KQVKLKPLHWDKVNPDSDHSMVWDKIDRGSFSFDGDLMEALFGYVAVGKKSPEQGDEKNPKST----QIFILDPRKSQNT 377
Cdd:pfam02181   7 PKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLSELEELFSAKAKTKKNKKSEDKSSSKkkpkEVSLLDPKRAQNI 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   378 AIVLKSLGMTREELVESLIEGNDFV--PDTLERLARIAPTKEEQSAILEFDGDTAKLADAETFLFHLLKsVPTAFTRLNA 455
Cdd:pfam02181  87 AILLRKLKLPPEEIIQAILEGDEDAldLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSK-IPRLEARLRA 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   456 FLFRANYYPEMAHHSKCLQTLDLACKELRSRGLFVKLLEAILKAGNRMNAGTARGNAQAFNLTALLKLSDVKSVDGKTSL 535
Cdd:pfam02181 166 LLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNKTTL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   536 LNFVVEEVVRsegkrcvmnrrshsltrsgssnynggnsslqvmskeeqekeylklGLPVVGGLSSEFSNVKKAACVDYET 615
Cdd:pfam02181 246 LHYLVKIIRE---------------------------------------------KFPEVLDFSSELSHVKKAAKVNLEQ 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   616 VVATCSALAVRAKDAKTVIGECEDGE--GGRFVKTMMTFLDSVEEEVKIAKGEERKVMELVKRTTDYYqaGAVTKGKNPL 693
Cdd:pfam02181 281 LEKDVKQLERGLKKLERELELSALDEhpDDKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYF--GEDPKETSPE 358
                         410
                  ....*....|....
gi 15223064   694 HLFVIVRDFLAMVD 707
Cdd:pfam02181 359 EFFKILRDFLKEFK 372
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
302-707 6.08e-123

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 372.76  E-value: 6.08e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   302 KQVKLKPLHWDKVNPDSDHSMVWDKIDRGSFSFDGDLMEALFGYVAVGKKSPEQGDEKNPKST----QIFILDPRKSQNT 377
Cdd:pfam02181   7 PKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLSELEELFSAKAKTKKNKKSEDKSSSKkkpkEVSLLDPKRAQNI 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   378 AIVLKSLGMTREELVESLIEGNDFV--PDTLERLARIAPTKEEQSAILEFDGDTAKLADAETFLFHLLKsVPTAFTRLNA 455
Cdd:pfam02181  87 AILLRKLKLPPEEIIQAILEGDEDAldLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSK-IPRLEARLRA 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   456 FLFRANYYPEMAHHSKCLQTLDLACKELRSRGLFVKLLEAILKAGNRMNAGTARGNAQAFNLTALLKLSDVKSVDGKTSL 535
Cdd:pfam02181 166 LLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNKTTL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   536 LNFVVEEVVRsegkrcvmnrrshsltrsgssnynggnsslqvmskeeqekeylklGLPVVGGLSSEFSNVKKAACVDYET 615
Cdd:pfam02181 246 LHYLVKIIRE---------------------------------------------KFPEVLDFSSELSHVKKAAKVNLEQ 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   616 VVATCSALAVRAKDAKTVIGECEDGE--GGRFVKTMMTFLDSVEEEVKIAKGEERKVMELVKRTTDYYqaGAVTKGKNPL 693
Cdd:pfam02181 281 LEKDVKQLERGLKKLERELELSALDEhpDDKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYF--GEDPKETSPE 358
                         410
                  ....*....|....
gi 15223064   694 HLFVIVRDFLAMVD 707
Cdd:pfam02181 359 EFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
297-714 2.41e-122

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 372.07  E-value: 2.41e-122
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    297 GGETSKQVKLKPLHWDKVNPDSDHSMVWDKIDRGSfSFDGDLMEALFGYVAVGK---KSPEQGDEKNPK--STQIFILDP 371
Cdd:smart00498   1 KKEPKPKKKLKPLHWDKLNPSDLSGTVWDKIDEES-EGDLDELEELFSAKEKTKsasKDVSEKKSILKKkaSQEFKILDP 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    372 RKSQNTAIVLKSLGMTREELVESLIEGNDFV--PDTLERLARIAPTKEEQSAILEFDGDTA-KLADAETFLFHLLKsVPT 448
Cdd:smart00498  80 KRSQNLAILLRKLHMSYEEIKEAILEGDEDVlsVDLLEQLLKYAPTKEELKKLREYKEEDPeELARAEQFLLLISN-IPY 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    449 AFTRLNAFLFRANYYPEMAHHSKCLQTLDLACKELRSRGLFVKLLEAILKAGNRMNAGTARGNAQAFNLTALLKLSDVKS 528
Cdd:smart00498 159 LEERLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKS 238
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    529 VDGKTSLLNFVVEEVVRSEgkrcvmnrrshsltrsgssnynggnsslqvmskeeqekeylKLGLPVVGGLSSEFSNV--- 605
Cdd:smart00498 239 ADNKTTLLHFLVKIIRKKY-----------------------------------------LGGLSDPENLDDKFIEVmkp 277
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    606 -KKAACVDYETVVATCSALAVRAKDAKTVIGECEDGEG-----GRFVKTMMTFLDSVEEEVKIAKGEERKVMELVKRTTD 679
Cdd:smart00498 278 fLKAAKEKYDKLQKDLSDLKTRFEKLVEYYGEDPKDTSpeeffKDFNEFLKEFSKAAEENIKKEEEEEERRKKLVKETTE 357
                          410       420       430
                   ....*....|....*....|....*....|....*
gi 15223064    680 YYQAGAVTKGKNPLHLFVIVRDFLAMVDKVCLDIM 714
Cdd:smart00498 358 YEQSSSRQKERNPSMDFEVERDFLGVLDSLLEELG 392
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
302-707 6.08e-123

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 372.76  E-value: 6.08e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   302 KQVKLKPLHWDKVNPDSDHSMVWDKIDRGSFSFDGDLMEALFGYVAVGKKSPEQGDEKNPKST----QIFILDPRKSQNT 377
Cdd:pfam02181   7 PKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLSELEELFSAKAKTKKNKKSEDKSSSKkkpkEVSLLDPKRAQNI 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   378 AIVLKSLGMTREELVESLIEGNDFV--PDTLERLARIAPTKEEQSAILEFDGDTAKLADAETFLFHLLKsVPTAFTRLNA 455
Cdd:pfam02181  87 AILLRKLKLPPEEIIQAILEGDEDAldLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSK-IPRLEARLRA 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   456 FLFRANYYPEMAHHSKCLQTLDLACKELRSRGLFVKLLEAILKAGNRMNAGTARGNAQAFNLTALLKLSDVKSVDGKTSL 535
Cdd:pfam02181 166 LLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNKTTL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   536 LNFVVEEVVRsegkrcvmnrrshsltrsgssnynggnsslqvmskeeqekeylklGLPVVGGLSSEFSNVKKAACVDYET 615
Cdd:pfam02181 246 LHYLVKIIRE---------------------------------------------KFPEVLDFSSELSHVKKAAKVNLEQ 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064   616 VVATCSALAVRAKDAKTVIGECEDGE--GGRFVKTMMTFLDSVEEEVKIAKGEERKVMELVKRTTDYYqaGAVTKGKNPL 693
Cdd:pfam02181 281 LEKDVKQLERGLKKLERELELSALDEhpDDKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYF--GEDPKETSPE 358
                         410
                  ....*....|....
gi 15223064   694 HLFVIVRDFLAMVD 707
Cdd:pfam02181 359 EFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
297-714 2.41e-122

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 372.07  E-value: 2.41e-122
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    297 GGETSKQVKLKPLHWDKVNPDSDHSMVWDKIDRGSfSFDGDLMEALFGYVAVGK---KSPEQGDEKNPK--STQIFILDP 371
Cdd:smart00498   1 KKEPKPKKKLKPLHWDKLNPSDLSGTVWDKIDEES-EGDLDELEELFSAKEKTKsasKDVSEKKSILKKkaSQEFKILDP 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    372 RKSQNTAIVLKSLGMTREELVESLIEGNDFV--PDTLERLARIAPTKEEQSAILEFDGDTA-KLADAETFLFHLLKsVPT 448
Cdd:smart00498  80 KRSQNLAILLRKLHMSYEEIKEAILEGDEDVlsVDLLEQLLKYAPTKEELKKLREYKEEDPeELARAEQFLLLISN-IPY 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    449 AFTRLNAFLFRANYYPEMAHHSKCLQTLDLACKELRSRGLFVKLLEAILKAGNRMNAGTARGNAQAFNLTALLKLSDVKS 528
Cdd:smart00498 159 LEERLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKS 238
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    529 VDGKTSLLNFVVEEVVRSEgkrcvmnrrshsltrsgssnynggnsslqvmskeeqekeylKLGLPVVGGLSSEFSNV--- 605
Cdd:smart00498 239 ADNKTTLLHFLVKIIRKKY-----------------------------------------LGGLSDPENLDDKFIEVmkp 277
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223064    606 -KKAACVDYETVVATCSALAVRAKDAKTVIGECEDGEG-----GRFVKTMMTFLDSVEEEVKIAKGEERKVMELVKRTTD 679
Cdd:smart00498 278 fLKAAKEKYDKLQKDLSDLKTRFEKLVEYYGEDPKDTSpeeffKDFNEFLKEFSKAAEENIKKEEEEEERRKKLVKETTE 357
                          410       420       430
                   ....*....|....*....|....*....|....*
gi 15223064    680 YYQAGAVTKGKNPLHLFVIVRDFLAMVDKVCLDIM 714
Cdd:smart00498 358 YEQSSSRQKERNPSMDFEVERDFLGVLDSLLEELG 392
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH