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Conserved domains on  [gi|30699227|ref|NP_177828|]
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DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

Protein Classification

J domain-containing protein( domain architecture ID 10694106)

J domain-containing protein similar to Arabidopsis thaliana chaperone protein dnaJ 10 that plays a continuous role in plant development probably in the structural organization of compartments

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9585179|23894646|35729039|9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ-X pfam14308
X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a ...
 131-318 7.21e-60

X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known.


:

Pssm-ID: 433858  Cd Length: 205  Bit Score: 192.36  E-value: 7.21e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   131 QKEREENLSRFLKDFLSQYVHGDKEG-----FISRAESEAKRLSDAAFGADMLHTIGYVYTRQAAQELGKRaLYLGVPFV 205
Cdd:pfam14308   1 QKEREEELAEKLRDRLSPYVEADKPGdvldeFEEKLEEEAEDLKLESFGVEILHTIGWVYENKAKSFLKSQ-KFLGVGGF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   206 AEWVRNKGHSWKSQISAAKGALQLLQLQEE-SNRRLKKDGTSPANELESHIQTNKETLMGSLWKLNVVDIEVTLLHVCQM 284
Cdd:pfam14308  80 FSSVKEKGRTVKNTWNTLSSALDAQSTMEEmAKEEEKGGEELTEEELAKLEELLTGKILAAAWAGSKFEIESTLREVCDK 159

                         170       180       190
                  ....*....|....*....|....*....|....
gi 30699227   285 VFRENNLRKEELKSRAMALKILGKIFQQEKQSKN 318
Cdd:pfam14308 160 VLKDKSVPKKTRIKRAEALLILGKIFQKAKRDPE 193
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 7-68 5.77e-31

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 112.18  E-value: 5.77e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30699227     7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYD 68
Cdd:pfam00226   2 YYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
 
Name Accession Description Interval E-value
DnaJ-X pfam14308
X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a ...
 131-318 7.21e-60

X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known.


Pssm-ID: 433858  Cd Length: 205  Bit Score: 192.36  E-value: 7.21e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   131 QKEREENLSRFLKDFLSQYVHGDKEG-----FISRAESEAKRLSDAAFGADMLHTIGYVYTRQAAQELGKRaLYLGVPFV 205
Cdd:pfam14308   1 QKEREEELAEKLRDRLSPYVEADKPGdvldeFEEKLEEEAEDLKLESFGVEILHTIGWVYENKAKSFLKSQ-KFLGVGGF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   206 AEWVRNKGHSWKSQISAAKGALQLLQLQEE-SNRRLKKDGTSPANELESHIQTNKETLMGSLWKLNVVDIEVTLLHVCQM 284
Cdd:pfam14308  80 FSSVKEKGRTVKNTWNTLSSALDAQSTMEEmAKEEEKGGEELTEEELAKLEELLTGKILAAAWAGSKFEIESTLREVCDK 159

                         170       180       190
                  ....*....|....*....|....*....|....
gi 30699227   285 VFRENNLRKEELKSRAMALKILGKIFQQEKQSKN 318
Cdd:pfam14308 160 VLKDKSVPKKTRIKRAEALLILGKIFQKAKRDPE 193
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 7-68 5.77e-31

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 112.18  E-value: 5.77e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30699227     7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYD 68
Cdd:pfam00226   2 YYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 7-71 2.24e-27

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 105.17  E-value: 2.24e-27
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227   7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:COG0484   2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 7-72 3.00e-23

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 99.21  E-value: 3.00e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227     7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK 72
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGH 66
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 7-72 3.69e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 99.45  E-value: 3.69e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK 72
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGH 71
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 7-60 1.20e-22

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 89.91  E-value: 1.20e-22
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 30699227   7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSD 60
Cdd:cd06257   2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
7-61 4.94e-21

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 85.36  E-value: 4.94e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227      7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDP-LAAEKFQVLGEAYQVLSDP 61
Cdd:smart00271   3 YYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKeEAEEKFKEINEAYEVLSDP 58
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 7-133 4.56e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 90.67  E-value: 4.56e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK---------FSAPK 77
Cdd:PRK14284   3 YYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKdgpfagaggFGGAG 82

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   78 -ETMVDPTAVFALLFGSEL------FEDYIGHLAVA------SMASTQMASEIENSD-QFQDKLKAVQKE 133
Cdd:PRK14284  83 mGNMEDALRTFMGAFGGEFggggsfFEGLFGGLGEAfgmrggPAGARQGASKKVHITlSFEEAAKGVEKE 152
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
7-92 3.74e-17

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 82.56  E-value: 3.74e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNqGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGKFSAPKETMV--DPT 84
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGGFgfDAF 85


                 ....*...
gi 30699227   85 AVFALLFG 92
Cdd:NF037946  86 DVFSSFFE 93
 
Name Accession Description Interval E-value
DnaJ-X pfam14308
X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a ...
 131-318 7.21e-60

X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known.


Pssm-ID: 433858  Cd Length: 205  Bit Score: 192.36  E-value: 7.21e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   131 QKEREENLSRFLKDFLSQYVHGDKEG-----FISRAESEAKRLSDAAFGADMLHTIGYVYTRQAAQELGKRaLYLGVPFV 205
Cdd:pfam14308   1 QKEREEELAEKLRDRLSPYVEADKPGdvldeFEEKLEEEAEDLKLESFGVEILHTIGWVYENKAKSFLKSQ-KFLGVGGF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   206 AEWVRNKGHSWKSQISAAKGALQLLQLQEE-SNRRLKKDGTSPANELESHIQTNKETLMGSLWKLNVVDIEVTLLHVCQM 284
Cdd:pfam14308  80 FSSVKEKGRTVKNTWNTLSSALDAQSTMEEmAKEEEKGGEELTEEELAKLEELLTGKILAAAWAGSKFEIESTLREVCDK 159

                         170       180       190
                  ....*....|....*....|....*....|....
gi 30699227   285 VFRENNLRKEELKSRAMALKILGKIFQQEKQSKN 318
Cdd:pfam14308 160 VLKDKSVPKKTRIKRAEALLILGKIFQKAKRDPE 193
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 7-68 5.77e-31

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 112.18  E-value: 5.77e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30699227     7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYD 68
Cdd:pfam00226   2 YYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 7-71 2.24e-27

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 105.17  E-value: 2.24e-27
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227   7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:COG0484   2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 7-72 3.00e-23

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 99.21  E-value: 3.00e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227     7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK 72
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGH 66
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 7-72 3.69e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 99.45  E-value: 3.69e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK 72
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGH 71
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 7-60 1.20e-22

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 89.91  E-value: 1.20e-22
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 30699227   7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSD 60
Cdd:cd06257   2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
7-61 4.94e-21

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 85.36  E-value: 4.94e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227      7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDP-LAAEKFQVLGEAYQVLSDP 61
Cdd:smart00271   3 YYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKeEAEEKFKEINEAYEVLSDP 58
PRK14289 PRK14289
molecular chaperone DnaJ;
1-92 1.02e-20

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 92.59  E-value: 1.02e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    1 MVKETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDR----------- 69
Cdd:PRK14289   1 MAEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQfghagvggaag 80

                         90       100
                 ....*....|....*....|...
gi 30699227   70 TGKFSAPKETMVDPTAVFALLFG 92
Cdd:PRK14289  81 GGGFSGEGMSMEDIFSMFGDIFG 103
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-70 2.00e-20

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 84.77  E-value: 2.00e-20
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30699227   1 MVKETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDP-LAAEKFQVLGEAYQVLSDPVHREAYDRT 70
Cdd:COG2214   1 MPDLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKaLAEELFQRLNEAYEVLSDPERRAEYDRE 71
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 7-133 4.56e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 90.67  E-value: 4.56e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK---------FSAPK 77
Cdd:PRK14284   3 YYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKdgpfagaggFGGAG 82

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   78 -ETMVDPTAVFALLFGSEL------FEDYIGHLAVA------SMASTQMASEIENSD-QFQDKLKAVQKE 133
Cdd:PRK14284  83 mGNMEDALRTFMGAFGGEFggggsfFEGLFGGLGEAfgmrggPAGARQGASKKVHITlSFEEAAKGVEKE 152
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 7-66 1.10e-19

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 81.97  E-value: 1.10e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREA 66
Cdd:COG5407   2 PYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKRAR 61
PRK14279 PRK14279
molecular chaperone DnaJ;
7-70 1.12e-19

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 89.41  E-value: 1.12e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRT 70
Cdd:PRK14279  11 FYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDET 74
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 2-324 1.69e-19

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 90.62  E-value: 1.69e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227     2 VKETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPlAAEKFQVLGEAYQVLSDPVHREAYDRTGKFSAPKETMV 81
Cdd:PTZ00341  570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNE-GFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFI 648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    82 DPTaVFALLFGSELFEDYIGHLAVASM-----ASTQMASEIENSDQFQDKLKAV-QKEREENLSRFLKDFLSQYVHGDKE 155
Cdd:PTZ00341  649 HPS-IFYLLASLEKFADFTGSPQIVTLlkfffEKKLSMNDLDNKSEHLLKFMEQyQKEREAHISENLINILQPCIAGDRK 727

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   156 GFIsRAESEAKRLSDAAFGADMLHTIGYVY----------TRQAAQELGKRAlYLGVPFVAeWVRNKGHSWKSQISAAKG 225
Cdd:PTZ00341  728 WDV-PIIDKIEELKGSPFDIAIIDSIGWIFkhvakshlkkPKKAAKKLEQRS-KANKEELA-NENNKLMNILKEYFGNNE 804

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   226 ALQLLQLQEESNRRLKKDGTSPANELE-SHIQTNK--ETLMGSLWKLNVVDIEVTLLHVCQMVFRENNLRKEELKSRAMA 302
Cdd:PTZ00341  805 QINSITYNFENINLNEDNENGSKKILDlNHKDQKEifEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKKRAES 884

                         330       340
                  ....*....|....*....|...
gi 30699227   303 LKILGKIFQQEK-QSKNGTTSRK 324
Cdd:PTZ00341  885 LKKLANAIEKYAgGGKKDKKAKK 907
PRK14295 PRK14295
molecular chaperone DnaJ;
4-68 5.68e-19

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 87.60  E-value: 5.68e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    4 ETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYD 68
Cdd:PRK14295   8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 2-72 6.92e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 86.97  E-value: 6.92e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30699227    2 VKETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK 72
Cdd:PRK14286   1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGK 71
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 7-71 8.36e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 86.72  E-value: 8.36e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14301   6 YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFG 70
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 1-143 1.04e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 86.78  E-value: 1.04e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    1 MVKETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGkfsapkETM 80
Cdd:PRK14277   1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFG------HAA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227   81 VDPTAV--------------FALLFGS------ELFEDYIGHLAVASMASTQMASEIENSDQFQDKLKAVQKEREENLSR 140
Cdd:PRK14277  75 FDPGGFgqggfgqggfggggFDFDFGGfgdifeDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVER 154


                 ...
gi 30699227  141 FLK 143
Cdd:PRK14277 155 FEK 157
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 7-71 1.56e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 85.97  E-value: 1.56e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14294   6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYG 70
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 7-98 1.80e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 85.98  E-value: 1.80e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK--FSAPKETMVDPT 84
Cdd:PRK14291   5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHaaFSGSGQQQQGQE 83

                         90
                 ....*....|....*.
gi 30699227   85 AVFALLFGS--ELFED 98
Cdd:PRK14291  84 GFSDFGGGNieDILED 99
PRK14297 PRK14297
molecular chaperone DnaJ;
7-71 3.73e-18

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 84.83  E-value: 3.73e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14297   6 YYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFG 70
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 7-71 1.15e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 82.29  E-value: 1.15e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14299   6 YYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYG 69
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 7-92 1.15e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 83.40  E-value: 1.15e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGkfSAPKETMV----- 81
Cdd:PRK14292   4 YYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFG--TAPGAGMPggdpf 80

                         90
                 ....*....|....*.
gi 30699227   82 -----DPTAVFALLFG 92
Cdd:PRK14292  81 ggmgfDPMDIFEQLFG 96
PRK14280 PRK14280
molecular chaperone DnaJ;
7-71 1.35e-17

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 83.23  E-value: 1.35e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14280   6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFG 69
PRK14293 PRK14293
molecular chaperone DnaJ;
7-71 3.19e-17

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 82.35  E-value: 3.19e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14293   5 YYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFG 68
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
7-92 3.74e-17

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 82.56  E-value: 3.74e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNqGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGKFSAPKETMV--DPT 84
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGGFgfDAF 85


                 ....*...
gi 30699227   85 AVFALLFG 92
Cdd:NF037946  86 DVFSSFFE 93
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 7-71 4.24e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 81.82  E-value: 4.24e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14298   7 YYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFG 70
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 4-71 4.29e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 81.67  E-value: 4.29e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30699227    4 ETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14276   3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYG 69
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 7-101 3.02e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 79.33  E-value: 3.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNqGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGKfsaPKETMVDPTAV 86
Cdd:PRK14278   5 YYGLLGVSRNASDAEIKRAYRKLARELHPDVN-PDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGD---PLESAGGGGGG 80

                         90
                 ....*....|....*..
gi 30699227   87 FALLFG--SELFEDYIG 101
Cdd:PRK14278  81 FGGGFGglGDVFEAFFG 97
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 7-71 8.22e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 78.31  E-value: 8.22e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14281   5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFG 69
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 7-71 1.31e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 77.53  E-value: 1.31e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGD-PLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14282   6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENrKEAEQKFKEIQEAYEVLSDPQKRAMYDRFG 71
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 1-71 1.66e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 77.17  E-value: 1.66e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30699227    1 MVKETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14283   1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFG 70
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 1-71 1.06e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 74.58  E-value: 1.06e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30699227    1 MVKEtvYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPL-AAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14290   1 MAKD--YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAeAEEKFKEISEAYEVLSDPQKRRQYDQTG 70
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 7-105 3.46e-13

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 70.23  E-value: 3.46e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNqGDPlaaEKFQVLGEAYQVLSDPVHREAYDRTGKFSAP-KETMVDPTA 85
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDP---EKFKEISRAYEVLSDPEKRKIYDEYGEEGLEgGEQPADASD 105

                         90       100
                 ....*....|....*....|....*..
gi 30699227   86 VFALLFGS-------ELFEDYIGHLAV 105
Cdd:PTZ00037 106 LFDLIFGGgrkpggkKRGEDIVSHLKV 132
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 7-99 8.71e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 68.86  E-value: 8.71e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGkfsapkETMVDPTAV 86
Cdd:PRK14285   5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFG------HTAFEGGGG 78

                         90
                 ....*....|....*...
gi 30699227   87 FALLFG-----SELFEDY 99
Cdd:PRK14285  79 FEGFSGgfsgfSDIFEDF 96
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 7-71 3.48e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 66.96  E-value: 3.48e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14287   6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
7-61 7.41e-12

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 60.58  E-value: 7.41e-12
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30699227   7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDK-NQGDP-----LAAEKFQVLGEAYQVLSDP 61
Cdd:COG1076   6 AFELLGLPPDADDAELKRAYRKLQREHHPDRlAAGLPeeeqrLALQKAAAINEAYETLKDP 66
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 7-71 8.25e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 65.81  E-value: 8.25e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDK-NQGDplAAEKFQVLGEAYQVLSDPVHREAYDRTG 71
Cdd:PRK14300   5 YYQILGVSKTASQADLKKAYLKLAKQYHPDTtDAKD--AEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 7-110 9.39e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 65.74  E-value: 9.39e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGkfsapkETMVDPTAV 86
Cdd:PRK14296   6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFG------HAAFDGSSG 78

                         90       100
                 ....*....|....*....|....
gi 30699227   87 FALLFGSelFEDYIGHLAVASMAS 110
Cdd:PRK14296  79 FSSNFGD--FEDLFSNMGSSGFSS 100
PRK14288 PRK14288
molecular chaperone DnaJ;
4-72 3.62e-11

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 63.94  E-value: 3.62e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30699227    4 ETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSDPVHREAYDRTGK 72
Cdd:PRK14288   2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGK 70
PRK10266 PRK10266
curved DNA-binding protein;
7-69 1.23e-09

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 58.68  E-value: 1.23e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30699227    7 YYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQgDPLAAEKFQVLGEAYQVLSDPVHREAYDR 69
Cdd:PRK10266   6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQ 67
PHA03102 PHA03102
Small T antigen; Reviewed
 9-102 1.59e-05

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 44.66  E-value: 1.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30699227    9 DVLGVTPSA--SEEEIRKAYYIKARQVHPDKNqGDPlaaEKFQVLGEAYQVLSDPVHrEAYDRTGKFSAPKETMVDPTAV 86
Cdd:PHA03102   9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKG-GDE---EKMKELNTLYKKFRESVK-SLRDLDGEEDSSSEEEDVPSGY 83

                         90
                 ....*....|....*.
gi 30699227   87 FALLFGSELFEDYIGH 102
Cdd:PHA03102  84 VGATFGDRVNALYCKD 99
djlA PRK09430
co-chaperone DjlA;
8-55 3.13e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 42.11  E-value: 3.13e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 30699227    8 YDVLGVTPSASEEEIRKAYyikaR----QVHPDK--NQGDP-----LAAEKFQVLGEAY 55
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAY----RklmsEHHPDKlvAKGLPpemmeMAKEKAQEIQAAY 257
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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