NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1063699218|ref|NP_181731|]
View 

plant EC metallothionein family protein [Arabidopsis thaliana]

Protein Classification

Metallothio_PEC domain-containing protein( domain architecture ID 10489125)

Metallothio_PEC domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Metallothio_PEC pfam02068
Plant PEC family metallothionein;
12-84 1.49e-22

Plant PEC family metallothionein;


:

Pssm-ID: 396582  Cd Length: 75  Bit Score: 82.21  E-value: 1.49e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063699218 12 GCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCPKTQTQT--SAKGCTCGEGCTCASCAT 84
Cdd:pfam02068  1 GCDDKCGCPVPCPGGTSCRCTSSGAAGGGGDHTTCSCGEHCGCNPCTCPKITTPTgrGRAGCSCGEGCTCASCAS 75
 
Name Accession Description Interval E-value
Metallothio_PEC pfam02068
Plant PEC family metallothionein;
12-84 1.49e-22

Plant PEC family metallothionein;


Pssm-ID: 396582  Cd Length: 75  Bit Score: 82.21  E-value: 1.49e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063699218 12 GCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCPKTQTQT--SAKGCTCGEGCTCASCAT 84
Cdd:pfam02068  1 GCDDKCGCPVPCPGGTSCRCTSSGAAGGGGDHTTCSCGEHCGCNPCTCPKITTPTgrGRAGCSCGEGCTCASCAS 75
 
Name Accession Description Interval E-value
Metallothio_PEC pfam02068
Plant PEC family metallothionein;
12-84 1.49e-22

Plant PEC family metallothionein;


Pssm-ID: 396582  Cd Length: 75  Bit Score: 82.21  E-value: 1.49e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063699218 12 GCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCPKTQTQT--SAKGCTCGEGCTCASCAT 84
Cdd:pfam02068  1 GCDDKCGCPVPCPGGTSCRCTSSGAAGGGGDHTTCSCGEHCGCNPCTCPKITTPTgrGRAGCSCGEGCTCASCAS 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH