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Conserved domains on  [gi|15231736|ref|NP_190872|]
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late embryogenesis abundant protein, putative / LEA protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PTZ00121 super family cl31754
MAEBL; Provisional
 106-385 6.46e-09

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 58.61  E-value: 6.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   106 AQKTKETADYTADKAREAKDKT-ADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKD--KTADKLGEYKDYT 182
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAeAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEekKKADEAKKKAEED 1403

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   183 AEKAKEAKDTTAEKL----GEYKDYTVDKAKEAKDKTAEKAKetAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADK 258
Cdd:PTZ00121 1404 KKKADELKKAAAAKKkadeAKKKAEEKKKADEAKKKAEEAKK--ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEE 1481

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   259 AREAKD--KTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAvDTAKRAmgflsgktEETKQKAVETKDTAKEKMDEAg 336
Cdd:PTZ00121 1482 AKKADEakKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKA-DEAKKA--------EEAKKADEAKKAEEKKKADEL- 1551

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 15231736   337 eearRKMEEMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEE 385
Cdd:PTZ00121 1552 ----KKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEE 1596
 
Name Accession Description Interval E-value
PTZ00121 PTZ00121
MAEBL; Provisional
 106-385 6.46e-09

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 58.61  E-value: 6.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   106 AQKTKETADYTADKAREAKDKT-ADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKD--KTADKLGEYKDYT 182
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAeAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEekKKADEAKKKAEED 1403

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   183 AEKAKEAKDTTAEKL----GEYKDYTVDKAKEAKDKTAEKAKetAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADK 258
Cdd:PTZ00121 1404 KKKADELKKAAAAKKkadeAKKKAEEKKKADEAKKKAEEAKK--ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEE 1481

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   259 AREAKD--KTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAvDTAKRAmgflsgktEETKQKAVETKDTAKEKMDEAg 336
Cdd:PTZ00121 1482 AKKADEakKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKA-DEAKKA--------EEAKKADEAKKAEEKKKADEL- 1551

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 15231736   337 eearRKMEEMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEE 385
Cdd:PTZ00121 1552 ----KKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEE 1596
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 157-200 1.59e-07

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 47.69  E-value: 1.59e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   157 AEYTAEKAREAKDKTADKLGEYKDYTAEKAKEAKDTTAEKLGEY 200
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
TolA COG3064
Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];
106-439 5.87e-03

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442298 [Multi-domain]  Cd Length: 485  Bit Score: 39.25  E-value: 5.87e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 106 AQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKDKTADKLGEYKDYTAEK 185
Cdd:COG3064  18 LEQAEAEKRAAAEAEQKAKEEAEEERLAELEAKRQAEEEAREAKAEAEQRAAELAAEAAKKLAEAEKAAAEAEKKAAAEK 97

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 186 AKEAKDTTAEKLGEYKDYTVDKAK--EAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAK 263
Cdd:COG3064  98 AKAAKEAEAAAAAEKAAAAAEKEKaeEAKRKAEEEAKRKAEEERKAAEAEAAAKAEAEAARAAAAAAAAAAAAAARAAAG 177

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 264 DKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQKAVETKDTAKEKMDEAGEEARRKM 343
Cdd:COG3064 178 AAAALVAAAAAAVEAADTAAAAAAALAAAAAAAAADAALLALAVAARAAAASREAALAAVEATEEAALGGAEEAADLAAV 257

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 344 EEMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEEGKGSIMGALGNMTGAIKSKLTGATTPSDEETRASAHGD 423
Cdd:COG3064 258 GVLGAALAAAAAGAAALSSGLVVVAAALAGLAAAAAGLVLDDSAALAAELLGAVAAEEAVLAAAAAAGALVVRGGGAASL 337

                       330
                ....*....|....*.
gi 15231736 424 ESTGKTVVAVDVKDTR 439
Cdd:COG3064 338 EAALSLLAAGAAAAAA 353
 
Name Accession Description Interval E-value
PTZ00121 PTZ00121
MAEBL; Provisional
 106-385 6.46e-09

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 58.61  E-value: 6.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   106 AQKTKETADYTADKAREAKDKT-ADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKD--KTADKLGEYKDYT 182
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAeAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEekKKADEAKKKAEED 1403

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   183 AEKAKEAKDTTAEKL----GEYKDYTVDKAKEAKDKTAEKAKetAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADK 258
Cdd:PTZ00121 1404 KKKADELKKAAAAKKkadeAKKKAEEKKKADEAKKKAEEAKK--ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEE 1481

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   259 AREAKD--KTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAvDTAKRAmgflsgktEETKQKAVETKDTAKEKMDEAg 336
Cdd:PTZ00121 1482 AKKADEakKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKA-DEAKKA--------EEAKKADEAKKAEEKKKADEL- 1551

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 15231736   337 eearRKMEEMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEE 385
Cdd:PTZ00121 1552 ----KKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEE 1596
PTZ00121 PTZ00121
MAEBL; Provisional
 84-387 2.97e-08

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 56.69  E-value: 2.97e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736    84 ADIASEKAAGMRDTTGEVRDSTAQKTKETADYTADKAREAKD--------KTADKTKETADYAAEKAREAKDRTADKTKE 155
Cdd:PTZ00121 1433 ADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEakkkaeeaKKADEAKKKAEEAKKKADEAKKAAEAKKKA 1512

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   156 TAEYTAEKAREAkDKTADKLGEYKDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDKTAEKAKETAEYTSDKARETKD 235
Cdd:PTZ00121 1513 DEAKKAEEAKKA-DEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE 1591

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   236 KTAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFLSGKTE 315
Cdd:PTZ00121 1592 ARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAE 1671

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15231736   316 ETKQKAVETKDTAKEKMDEAGEEARRKMEEMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEEGK 387
Cdd:PTZ00121 1672 EDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDK 1743
PTZ00121 PTZ00121
MAEBL; Provisional
 84-371 1.20e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 54.76  E-value: 1.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736    84 ADIASEKAAGMRDTTGEVRDSTAQKTKetADYTADKAREAKdkTADKTKETADyAAEKAREAKDRTADKTKetAEYTAEK 163
Cdd:PTZ00121 1393 ADEAKKKAEEDKKKADELKKAAAAKKK--ADEAKKKAEEKK--KADEAKKKAE-EAKKADEAKKKAEEAKK--AEEAKKK 1465

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   164 AREAKD-----------KTADKLGEYKDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKD-KTAEKAKETAEYTS---- 227
Cdd:PTZ00121 1466 AEEAKKadeakkkaeeaKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEaKKAEEAKKADEAKKaeek 1545

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   228 DKARETKDKTAEKVGEYKDYTAEKAKETADK---------AREAKDKTAEKVGE-YRDYTAEKATETKDAGVSKIGELKD 297
Cdd:PTZ00121 1546 KKADELKKAEELKKAEEKKKAEEAKKAEEDKnmalrkaeeAKKAEEARIEEVMKlYEEEKKMKAEEAKKAEEAKIKAEEL 1625

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15231736   298 SAVDTAKRAMGFLSGKTEETKQKAVETKDTAKEKMDEAGEEARRKMEEMRL--EGKKLDEDASRKTQQSTESAADK 371
Cdd:PTZ00121 1626 KKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKaeEAKKAEEDEKKAAEALKKEAEEA 1701
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 157-200 1.59e-07

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 47.69  E-value: 1.59e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   157 AEYTAEKAREAKDKTADKLGEYKDYTAEKAKEAKDTTAEKLGEY 200
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 179-222 1.66e-07

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 47.69  E-value: 1.66e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   179 KDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDKTAEKAKET 222
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
PTZ00121 PTZ00121
MAEBL; Provisional
 87-387 1.99e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 53.99  E-value: 1.99e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736    87 ASEKAAGMRDTTGEVRDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKARE 166
Cdd:PTZ00121 1180 AARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEE 1259

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   167 AK-DKTADKLGEYKDYTAEKAKEAKDTTAEKLGE--YKDYTVDKAKEAKDKTAEKAKetAEYTSDKARETKDKTAEkvGE 243
Cdd:PTZ00121 1260 ARmAHFARRQAAIKAEEARKADELKKAEEKKKADeaKKAEEKKKADEAKKKAEEAKK--ADEAKKKAEEAKKKADA--AK 1335

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   244 YKDYTAEKAKETADKAREAKDKTAEKVGEYRDYTAEKATETKdagvSKIGELKDSAVDtaKRAMGFLSGKTEETKQKAVE 323
Cdd:PTZ00121 1336 KKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAK----KKADAAKKKAEE--KKKADEAKKKAEEDKKKADE 1409

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15231736   324 TKDTAKEKmdEAGEEARRKMEEMR--------LEGKKLDEDASRKTQQS--TESAADKAHETK--DSVAQRGEEGK 387
Cdd:PTZ00121 1410 LKKAAAAK--KKADEAKKKAEEKKkadeakkkAEEAKKADEAKKKAEEAkkAEEAKKKAEEAKkaDEAKKKAEEAK 1483
PTZ00121 PTZ00121
MAEBL; Provisional
 117-382 2.48e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 53.61  E-value: 2.48e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   117 ADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKDKTADKLgeYKDYTAEKAKEAKDTTAEK 196
Cdd:PTZ00121 1539 AKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEV--MKLYEEEKKMKAEEAKKAE 1616

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   197 LGEYKDYTVDKAKEAKDKTAEKAKETAEytSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEYRDY 276
Cdd:PTZ00121 1617 EAKIKAEELKKAEEEKKKVEQLKKKEAE--EKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEAL 1694

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   277 TAEKATETKDAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQKAVETKDTAKEKMDEAGEeaRRKMEEMRLEGKKLDED 356
Cdd:PTZ00121 1695 KKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE--KKKIAHLKKEEEKKAEE 1772

                         250       260
                  ....*....|....*....|....*.
gi 15231736   357 ASRKTQQSTESAADKAHETKDSVAQR 382
Cdd:PTZ00121 1773 IRKEKEAVIEEELDEEDEKRRMEVDK 1798
PTZ00121 PTZ00121
MAEBL; Provisional
 117-387 7.52e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 52.07  E-value: 7.52e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   117 ADKAREAKDKTADKTKETADYAAE--KAREAKdRTADKTKETAEYTAEKAREAKDKTADKLGEYKDYTAEKAKEAKDTTA 194
Cdd:PTZ00121 1169 ARKAEDAKKAEAARKAEEVRKAEElrKAEDAR-KAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEE 1247

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   195 EKLGE--YKDYTVDKAKEAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAKD--KTAEKV 270
Cdd:PTZ00121 1248 ERNNEeiRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEakKKAEEA 1327

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   271 GEYRDYTAEKATETKDAGVSKIGELKDSA--VDTAKRAMGFLSGKTEETKQKAVETKDTAKEKmdEAGEEARRKMEEMRL 348
Cdd:PTZ00121 1328 KKKADAAKKKAEEAKKAAEAAKAEAEAAAdeAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK--KKADEAKKKAEEDKK 1405

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 15231736   349 EGKKLDEDASRKtqQSTESAADKAHETK--DSVAQRGEEGK 387
Cdd:PTZ00121 1406 KADELKKAAAAK--KKADEAKKKAEEKKkaDEAKKKAEEAK 1444
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 135-178 3.71e-06

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 43.84  E-value: 3.71e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   135 ADYAAEKAREAKDRTADKTKETAEYTAEKAREAKDKTADKLGEY 178
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 113-156 5.34e-06

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 43.45  E-value: 5.34e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   113 ADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKET 156
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 201-244 8.90e-06

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 42.68  E-value: 8.90e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   201 KDYTVDKAKEAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEY 244
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
PTZ00121 PTZ00121
MAEBL; Provisional
 114-387 5.17e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 46.29  E-value: 5.17e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   114 DYTADKAREAKDKTADKTKETADYAAE---KAREAKDRTADKTKETAEYTAEKAR---EAKDKTADKLGEY--------K 179
Cdd:PTZ00121 1086 DNRADEATEEAFGKAEEAKKTETGKAEearKAEEAKKKAEDARKAEEARKAEDARkaeEARKAEDAKRVEIarkaedarK 1165

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   180 DYTAEKAKEAKDTTAEKLGE--------YKDYTVDKAKEAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEyKDYTAEK 251
Cdd:PTZ00121 1166 AEEARKAEDAKKAEAARKAEevrkaeelRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKK-DAEEAKK 1244

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   252 AKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAvDTAKRAMGflSGKTEETKQKAVETK--DTAK 329
Cdd:PTZ00121 1245 AEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKA-DEAKKAEE--KKKADEAKKKAEEAKkaDEAK 1321

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15231736   330 EKMDEA---GEEARRKMEEMR--LEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEEGK 387
Cdd:PTZ00121 1322 KKAEEAkkkADAAKKKAEEAKkaAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAK 1384
PRK05901 PRK05901
RNA polymerase sigma factor; Provisional
 138-379 7.15e-05

RNA polymerase sigma factor; Provisional


Pssm-ID: 235640 [Multi-domain]  Cd Length: 509  Bit Score: 45.37  E-value: 7.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  138 AAEKAREAKDRTADKTKETAEYTAEKAREAKDKTADKLgeyKDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDKTAE 217
Cdd:PRK05901   1 MTTASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEI---KEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKK 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  218 KAKETAEYTSDKARETKDKTAEKvgeykdyTAEKAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKD 297
Cdd:PRK05901  78 KTKTAAKAAAAKAPAKKKLKDEL-------DSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDD 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  298 SAVDTAKraMGFLSGKTEETKQKAVETKDTAKEKMDEAGEEarrkmeemrlegKKLDEDASRKTQQSTesaadKAHETKD 377
Cdd:PRK05901 151 DDDEDDD--EDDDDDDVDDEDEEKKEAKELEKLSDDDDFVW------------DEDDSEALRQARKDA-----KLTATAD 211


                 ..
gi 15231736  378 SV 379
Cdd:PRK05901 212 PV 213
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 223-273 1.29e-04

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 39.21  E-value: 1.29e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 15231736   223 AEYTSDKARETKDKTAEKVGEYKDYTAEKAKetadkarEAKDKTAEKVGEY 273
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAG-------EAKDKAAEKAGEA 44
PRK05035 PRK05035
electron transport complex protein RnfC; Provisional
 138-372 3.65e-04

electron transport complex protein RnfC; Provisional


Pssm-ID: 235334 [Multi-domain]  Cd Length: 695  Bit Score: 43.01  E-value: 3.65e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  138 AAEKAREAKDRTADKTKETAEytAEKAREAKDKTAdklgeykdyTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDKTAE 217
Cdd:PRK05035 436 AEIRAIEQEKKKAEEAKARFE--ARQARLEREKAA---------REARHKKAAEARAAKDKDAVAAALARVKAKKAAATQ 504

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  218 KAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADK---------AReAKDKTAEKVGEyrDYTAEKATETKDAG 288
Cdd:PRK05035 505 PIVIKAGARPDNSAVIAAREARKAQARARQAEKQAAAAADPkkaavaaaiAR-AKAKKAAQQAA--NAEAEEEVDPKKAA 581

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  289 VSKigelkdsAVDTAKRAMGFLSGkTEETKQKAVETKDTAKEKMDEAGEEARRKMEEMRLEGKKLDEDASRKTQQSTESA 368
Cdd:PRK05035 582 VAA-------AIARAKAKKAAQQA-ASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQANAEPEEPVDPRKAAVAAAIA 653


                 ....
gi 15231736  369 ADKA 372
Cdd:PRK05035 654 RAKA 657
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 252-295 3.92e-04

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 38.06  E-value: 3.92e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   252 AKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGEL 295
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
Borrelia_P83 pfam05262
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
 114-303 7.44e-04

Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.


Pssm-ID: 114011 [Multi-domain]  Cd Length: 489  Bit Score: 41.91  E-value: 7.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   114 DYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETaeytaekarEAKDKTADKLGEYKDYTAEKAKEAKDTT 193
Cdd:pfam05262 180 KKVVEALREDNEKGVNFRRDMTDLKERESQEDAKRAQQLKEEL---------DKKQIDADKAQQKADFAQDNADKQRDEV 250

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   194 AEKLGEYKDyTVDKAKEAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAK-ETADKAREAKDKTAEKVGE 272
Cdd:pfam05262 251 RQKQQEAKN-LPKPADTSSPKEDKQVAENQKREIEKAQIEIKKNDEEALKAKDHKAFDLKqESKASEKEAEDKELEAQKK 329

                         170       180       190
                  ....*....|....*....|....*....|.
gi 15231736   273 YRDyTAEKATETKDAGVSKIGELKDSAVDTA 303
Cdd:pfam05262 330 REP-VAEDLQKTKPQVEAQPTSLNEDAIDSS 359
LEA_4 pfam02987
Late embryogenesis abundant protein; Different types of LEA proteins are expressed at ...
 102-145 1.26e-03

Late embryogenesis abundant protein; Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown.


Pssm-ID: 111833 [Multi-domain]  Cd Length: 44  Bit Score: 36.52  E-value: 1.26e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 15231736   102 RDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREA 145
Cdd:pfam02987   1 KDYAAEKAKEAKDATAEKAGEYKDYAAEKAGEAKDKAAEKAGEA 44
PTZ00121 PTZ00121
MAEBL; Provisional
 85-414 1.69e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 41.28  E-value: 1.69e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736    85 DIASEKAAGMRDTTGEVRDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKtketaeytAEKA 164
Cdd:PTZ00121 1046 DIIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEE--------ARKA 1117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   165 REAKDKTADKLGEYKDYTAE---KAKEAKDTTAEKLGEYKDYTVDKAKEAKDKTAEKAKET-----AEYTSDKARETKDK 236
Cdd:PTZ00121 1118 EEAKKKAEDARKAEEARKAEdarKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAeaarkAEEVRKAEELRKAE 1197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   237 TAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGElKDSAVDTAKRAMGFLSGKTEE 316
Cdd:PTZ00121 1198 DARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIR-KFEEARMAHFARRQAAIKAEE 1276

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   317 TKQKAVETKDTAKEKMDEA--------GEEARRKMEEMRL--EGKKLDEDASRKTQQSTESAADKahETKDSVAQRGEEG 386
Cdd:PTZ00121 1277 ARKADELKKAEEKKKADEAkkaeekkkADEAKKKAEEAKKadEAKKKAEEAKKKADAAKKKAEEA--KKAAEAAKAEAEA 1354

                         330       340
                  ....*....|....*....|....*...
gi 15231736   387 KGSIMGALGNMTGAIKSKLTGATTPSDE 414
Cdd:PTZ00121 1355 AADEAEAAEEKAEAAEKKKEEAKKKADA 1382
PRK05901 PRK05901
RNA polymerase sigma factor; Provisional
 119-325 1.92e-03

RNA polymerase sigma factor; Provisional


Pssm-ID: 235640 [Multi-domain]  Cd Length: 509  Bit Score: 40.75  E-value: 1.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  119 KAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETAEytaEKAREAKDKTADKLGEYKDYTAEKAKEAKDTTAEKLG 198
Cdd:PRK05901   4 ASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALE---SKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  199 EYKDYTvDKAKEAKDKTAEKAK-ETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEYRDYT 277
Cdd:PRK05901  81 TAAKAA-AAKAPAKKKLKDELDsSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDED 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 15231736  278 A-EKATETKDAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQKAVETK 325
Cdd:PRK05901 160 DdDDDVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEALRQARKDAKLTA 208
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 75-231 2.36e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 40.35  E-value: 2.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   75 DTAESTREGADIASEKAAGMRDTTGEVRDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKarEAKDRTADKTK 154
Cdd:PRK13108 307 AVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEADIER--EQPGDLAGQAP 384

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15231736  155 ETAEYTAEKAREAKDKTADKLGEYKDytaEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDKT-AEKAKETAEYTSDKAR 231
Cdd:PRK13108 385 AAHQVDAEAASAAPEEPAALASEAHD---ETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAePDGIRRQDDFSSRRRR 459
PRK02224 PRK02224
DNA double-strand break repair Rad50 ATPase;
70-379 3.04e-03

DNA double-strand break repair Rad50 ATPase;


Pssm-ID: 179385 [Multi-domain]  Cd Length: 880  Bit Score: 40.02  E-value: 3.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736   70 IGKSHDTAESTREGADIASEKAAGMRDTTGEVrDSTAQKTKETA----------DYTADKAREAKDKTADKTKETADYAA 139
Cdd:PRK02224 337 AQAHNEEAESLREDADDLEERAEELREEAAEL-ESELEEAREAVedrreeieelEEEIEELRERFGDAPVDLGNAEDFLE 415

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  140 E------------KAREAKDRTADKTKETAEY---------------------TAEKAREAKDKTADKLGEYKDYTAEKa 186
Cdd:PRK02224 416 ElreerdelrereAELEATLRTARERVEEAEAlleagkcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEV- 494

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  187 kEAKDTTAEKLGEYKDyTVDKAKEaKDKTAEKAKETAEYTSDKARETKDKTAEKVGEYkDYTAEKAKETADKAREAKDKT 266
Cdd:PRK02224 495 -EERLERAEDLVEAED-RIERLEE-RREDLEELIAERRETIEEKRERAEELRERAAEL-EAEAEEKREAAAEAEEEAEEA 570

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  267 AEKVGEYRDYTAEKATETKdaGVSKIGELkDSAVDTAKRAMGFLSGKTEETKQKAVETKDTAKEKMDEAgEEARRKMEEM 346
Cdd:PRK02224 571 REEVAELNSKLAELKERIE--SLERIRTL-LAAIADAEDEIERLREKREALAELNDERRERLAEKRERK-RELEAEFDEA 646

                        330       340       350
                 ....*....|....*....|....*....|...
gi 15231736  347 RLEGKKLDEDASRKTQQSTESAADKAHETKDSV 379
Cdd:PRK02224 647 RIEEAREDKERAEEYLEQVEEKLDELREERDDL 679
PRK05901 PRK05901
RNA polymerase sigma factor; Provisional
 102-301 5.07e-03

RNA polymerase sigma factor; Provisional


Pssm-ID: 235640 [Multi-domain]  Cd Length: 509  Bit Score: 39.21  E-value: 5.07e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  102 RDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAK---DRTADKTKETAEYTAEKAREAKDKTADKlgey 178
Cdd:PRK05901   9 ELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDqvlIFLSGMVKDTDDATESDIPKKKTKTAAK---- 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  179 kdyTAEKAKEAKDTTAEKLgeykdytvDKAKEAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADK 258
Cdd:PRK05901  85 ---AAAAKAPAKKKLKDEL--------DSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDD 153

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 15231736  259 AREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVD 301
Cdd:PRK05901 154 EDDDEDDDDDDVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEA 196
TolA COG3064
Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];
106-439 5.87e-03

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442298 [Multi-domain]  Cd Length: 485  Bit Score: 39.25  E-value: 5.87e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 106 AQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKDKTADKLGEYKDYTAEK 185
Cdd:COG3064  18 LEQAEAEKRAAAEAEQKAKEEAEEERLAELEAKRQAEEEAREAKAEAEQRAAELAAEAAKKLAEAEKAAAEAEKKAAAEK 97

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 186 AKEAKDTTAEKLGEYKDYTVDKAK--EAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAK 263
Cdd:COG3064  98 AKAAKEAEAAAAAEKAAAAAEKEKaeEAKRKAEEEAKRKAEEERKAAEAEAAAKAEAEAARAAAAAAAAAAAAAARAAAG 177

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 264 DKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQKAVETKDTAKEKMDEAGEEARRKM 343
Cdd:COG3064 178 AAAALVAAAAAAVEAADTAAAAAAALAAAAAAAAADAALLALAVAARAAAASREAALAAVEATEEAALGGAEEAADLAAV 257

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736 344 EEMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEEGKGSIMGALGNMTGAIKSKLTGATTPSDEETRASAHGD 423
Cdd:COG3064 258 GVLGAALAAAAAGAAALSSGLVVVAAALAGLAAAAAGLVLDDSAALAAELLGAVAAEEAVLAAAAAAGALVVRGGGAASL 337

                       330
                ....*....|....*.
gi 15231736 424 ESTGKTVVAVDVKDTR 439
Cdd:COG3064 338 EAALSLLAAGAAAAAA 353
ElaB COG4575
Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD ...
 73-155 7.65e-03

Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family [Translation, ribosomal structure and biogenesis];


Pssm-ID: 443632 [Multi-domain]  Cd Length: 108  Bit Score: 36.07  E-value: 7.65e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231736  73 SHDTAESTREGADIASEKAAGMRDTTGEVRDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADK 152
Cdd:COG4575   3 NTKTTTSVEDSKEDLEADLKALVDDLEELLKSTADDAGEKAAELREKAEAALDEARERLSEAEDAAVERAREAADAADDY 82


                ...
gi 15231736 153 TKE 155
Cdd:COG4575  83 VHE 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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