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Conserved domains on  [gi|15236572|ref|NP_194101|]
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cation/H+ exchanger 17 [Arabidopsis thaliana]

Protein Classification

cation:proton antiporter( domain architecture ID 1004552)

cation:proton antiporter functions in maintaining cation homeostasis and the pH of actively metabolizing cells; it may also be involved in regulating cell volume

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN03159 super family cl33651
cation/H(+) antiporter 15; Provisional
2-800 0e+00

cation/H(+) antiporter 15; Provisional


The actual alignment was detected with superfamily member PLN03159:

Pssm-ID: 215608 [Multi-domain]  Cd Length: 832  Bit Score: 787.93  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572    2 GTNGTTCPGPMKATSNGVFQGENPLEHALPLLILQICIVLLLTRLLAFLLRPLRQPRVIAEIVGGILLGPSALGKSTKFI 81
Cdd:PLN03159  13 TASSVVCYAPMMITTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   82 NTVFPPKSLTVLDTLANLGLIFFLFLVGLELDPKSLKRTGKRALSIALAGITLPFVLGIGTSFALRSSiADGASKAPFLV 161
Cdd:PLN03159  93 NTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQV-SRNVHQGTFIL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  162 FMGVALSITAFPVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLALAVALSGEGSSPLTSLWVFLSGCGFVLFCIFV 241
Cdd:PLN03159 172 FLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVLFCFYV 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  242 VQPGIKLIAKRCPEGEPVNELYVCCTLGIVLAASFVTDFIGIHALFGAFVIGVIFPKeGNFANALVEKVEDLVSGLFLPL 321
Cdd:PLN03159 252 VRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-GPLGVTLIEKLEDFVSGLLLPL 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  322 YFVSSGLKTNVATIQGAQSWGLLVLVIFNACFGKIIGTVLVSLYCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLN 401
Cdd:PLN03159 331 FFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLD 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  402 DQIFAIMVLMAIFTTFMTTPLVLAVYKPGKSLTKadYKNRTVEETnRSNKPLCLMFCFQSIMNIPTIVNLIEASRGiNRK 481
Cdd:PLN03159 411 DESFAVMVLVAVAMTALITPVVTVVYRPARRLVG--YKRRTIQRS-KHDAELRMLVCVHTPRNVPTIINLLEASHP-TKR 486
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  482 ENLSVYAMHLMELSERSSAILMAHKVRRNGLPfwnkdKSENNSSSSDMVVVAFEAFRR-LSRVSVRPMTAISPMATIHED 560
Cdd:PLN03159 487 SPICIYVLHLVELTGRASAMLIVHNTRKSGRP-----ALNRTQAQSDHIINAFENYEQhAGCVSVQPLTAISPYSTMHED 561
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  561 ICQSAERKKTAMVILPFHKHVRLDRTWETTRNDYRWINKKVMEESPCSVAILVDRGLGGTTRVASSDFSLTITVLFFGGN 640
Cdd:PLN03159 562 VCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVSHHVAVLFFGGP 641
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  641 DDREALAFAVRMAEHPGISLTVVRFIPSDEFK---------PENVRIEITEDQlcSGATRLIDIEAITELKAKIKEKESs 711
Cdd:PLN03159 642 DDREALAYAWRMSEHPGITLTVMRFIPGEDAAptasqpassPSDPRIPTVETD--GKKERQLDEEYINEFRARNAGNES- 718
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  712 rsnsdseshIIYEEKIVKCYEEVIEVIKEY-SKSNLFLVGKSP-EGS-VASGINVRSDTPELGPIGNLLTESESVSTVaS 788
Cdd:PLN03159 719 ---------IVYTEKVVSNGEETVAAIRSMdSAHDLFIVGRGQgMISpLTAGLTDWSECPELGAIGDLLASSDFAATV-S 788
                        810
                 ....*....|..
gi 15236572  789 VLVVQQYIASRP 800
Cdd:PLN03159 789 VLVVQQYVGTGP 800
 
Name Accession Description Interval E-value
PLN03159 PLN03159
cation/H(+) antiporter 15; Provisional
2-800 0e+00

cation/H(+) antiporter 15; Provisional


Pssm-ID: 215608 [Multi-domain]  Cd Length: 832  Bit Score: 787.93  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572    2 GTNGTTCPGPMKATSNGVFQGENPLEHALPLLILQICIVLLLTRLLAFLLRPLRQPRVIAEIVGGILLGPSALGKSTKFI 81
Cdd:PLN03159  13 TASSVVCYAPMMITTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   82 NTVFPPKSLTVLDTLANLGLIFFLFLVGLELDPKSLKRTGKRALSIALAGITLPFVLGIGTSFALRSSiADGASKAPFLV 161
Cdd:PLN03159  93 NTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQV-SRNVHQGTFIL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  162 FMGVALSITAFPVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLALAVALSGEGSSPLTSLWVFLSGCGFVLFCIFV 241
Cdd:PLN03159 172 FLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVLFCFYV 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  242 VQPGIKLIAKRCPEGEPVNELYVCCTLGIVLAASFVTDFIGIHALFGAFVIGVIFPKeGNFANALVEKVEDLVSGLFLPL 321
Cdd:PLN03159 252 VRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-GPLGVTLIEKLEDFVSGLLLPL 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  322 YFVSSGLKTNVATIQGAQSWGLLVLVIFNACFGKIIGTVLVSLYCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLN 401
Cdd:PLN03159 331 FFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLD 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  402 DQIFAIMVLMAIFTTFMTTPLVLAVYKPGKSLTKadYKNRTVEETnRSNKPLCLMFCFQSIMNIPTIVNLIEASRGiNRK 481
Cdd:PLN03159 411 DESFAVMVLVAVAMTALITPVVTVVYRPARRLVG--YKRRTIQRS-KHDAELRMLVCVHTPRNVPTIINLLEASHP-TKR 486
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  482 ENLSVYAMHLMELSERSSAILMAHKVRRNGLPfwnkdKSENNSSSSDMVVVAFEAFRR-LSRVSVRPMTAISPMATIHED 560
Cdd:PLN03159 487 SPICIYVLHLVELTGRASAMLIVHNTRKSGRP-----ALNRTQAQSDHIINAFENYEQhAGCVSVQPLTAISPYSTMHED 561
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  561 ICQSAERKKTAMVILPFHKHVRLDRTWETTRNDYRWINKKVMEESPCSVAILVDRGLGGTTRVASSDFSLTITVLFFGGN 640
Cdd:PLN03159 562 VCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVSHHVAVLFFGGP 641
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  641 DDREALAFAVRMAEHPGISLTVVRFIPSDEFK---------PENVRIEITEDQlcSGATRLIDIEAITELKAKIKEKESs 711
Cdd:PLN03159 642 DDREALAYAWRMSEHPGITLTVMRFIPGEDAAptasqpassPSDPRIPTVETD--GKKERQLDEEYINEFRARNAGNES- 718
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  712 rsnsdseshIIYEEKIVKCYEEVIEVIKEY-SKSNLFLVGKSP-EGS-VASGINVRSDTPELGPIGNLLTESESVSTVaS 788
Cdd:PLN03159 719 ---------IVYTEKVVSNGEETVAAIRSMdSAHDLFIVGRGQgMISpLTAGLTDWSECPELGAIGDLLASSDFAATV-S 788
                        810
                 ....*....|..
gi 15236572  789 VLVVQQYIASRP 800
Cdd:PLN03159 789 VLVVQQYVGTGP 800
KefB COG0475
Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism]; ...
30-428 1.95e-84

Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism];


Pssm-ID: 440243 [Multi-domain]  Cd Length: 384  Bit Score: 274.33  E-value: 1.95e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  30 LPLLILQICIVLLLTRLLAFLLRPLRQPRVIAEIVGGILLGPSALGkstkFINtvfppkSLTVLDTLANLGLIFFLFLVG 109
Cdd:COG0475   2 LASLLLQLGLLLLAAVLAGLLARRLGLPSVLGYILAGILLGPSGLG----LIE------DSEALELLAELGVVLLLFLIG 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 110 LELDPKSLKRTGKRALSIALAGITLPFVLGIGTSFALRSSIADGaskapflVFMGVALSITAFPVLARILAEIKLLTTDI 189
Cdd:COG0475  72 LELDLKRLRKMGRRALGIGLLQVLLPFLLGFLLALLLGLSLAAA-------LFLGAALAATSTAIVLKVLKELGLLKTPL 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 190 GKIALSAAAVNDVAAWILLALAVALSGEGSSPLTSLWVFLSGCGFVLFCIFVVQPGIKLIAKRCpEGEPVNELYVCCTLG 269
Cdd:COG0475 145 GQLILGVALFDDIAAILLLALVPALAGGGSVAGSLLLALLKALLFLALLLLVGRYLLRRLFRLV-ARTRSRELFLLFALL 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 270 IVLAASFVTDFIGIHALFGAFVIGVIFPkEGNFANALVEKVEDlVSGLFLPLYFVSSGLKTNVATIqgAQSWGLLVLVIF 349
Cdd:COG0475 224 LVLLAAALAELLGLSAALGAFLAGLVLA-ESEYRHELEEKIEP-FGDLFLPLFFVSVGLSLDLSAL--LSNPLLALLLVL 299
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15236572 350 NACFGKIIGTVLVSLYCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLNDQIFAIMVLMAIFTTFMTTPLVLAVYK 428
Cdd:COG0475 300 AAIVGKLLGAYLAARLFGLSRREALRIGLLLAPRGEFALVLASLGLSAGLISPELFAALVLVVLLTTLLTPLLLRLALR 378
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
37-417 1.06e-53

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 190.93  E-value: 1.06e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572    37 ICIVLLLTRLLAFLLRPLRQPRVIAEIVGGILLGPSALGkstkfintvFPPKSLTVLDTLANLGLIFFLFLVGLELDPKS 116
Cdd:pfam00999   1 IVLLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLG---------LISEVDEDLEVLSNLGLPPLLFLAGLELDLRE 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   117 LKRTGKRALSIALAGITLPFVLgigTSFALRSSIADGASKApfLVFMGVALSITAFPVLARILAEIKLLTTDIGKIALSA 196
Cdd:pfam00999  72 LRKNGGSILLLALLGVLIPFVL---IGLLLYLLGLGIPLLE--ALLFGAILSATSPVVVLAILKELGRVPERLGTLLLGE 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   197 AAVNDVAAWILLALAVALS---GEGSSPLTSLWVFLSGCGFVLFCIFVVQPGIKLIAKRCpegEPVNELYVCCTLGIVLA 273
Cdd:pfam00999 147 SVLNDGVAVVLLAVLLALAqgvGGGSDLGWLLLIFLVVAVGGLLLGLLIGWLLRLITRFT---DDDRELEVLLVLLLALL 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   274 ASFVTDFIGIHALFGAFVIGVIFPkEGNFANALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGaqSWGLLVLVIFNACF 353
Cdd:pfam00999 224 AALLAEALGVSGILGAFLAGLVLS-EYPFANKLSEKLEPFGYGLFNPLFFVLVGLSLDLSSLLL--SVWILVLLALVAIL 300
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15236572   354 -GKIIGTVLVSLYCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLNDQIFAIMVLMAIFTTF 417
Cdd:pfam00999 301 lGRFLGVFLLLRLLGLSLREALIIGFGGLQRGAVSLALAAIGPLLGIIARELYPLLIVVVLFTVL 365
 
Name Accession Description Interval E-value
PLN03159 PLN03159
cation/H(+) antiporter 15; Provisional
2-800 0e+00

cation/H(+) antiporter 15; Provisional


Pssm-ID: 215608 [Multi-domain]  Cd Length: 832  Bit Score: 787.93  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572    2 GTNGTTCPGPMKATSNGVFQGENPLEHALPLLILQICIVLLLTRLLAFLLRPLRQPRVIAEIVGGILLGPSALGKSTKFI 81
Cdd:PLN03159  13 TASSVVCYAPMMITTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   82 NTVFPPKSLTVLDTLANLGLIFFLFLVGLELDPKSLKRTGKRALSIALAGITLPFVLGIGTSFALRSSiADGASKAPFLV 161
Cdd:PLN03159  93 NTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQV-SRNVHQGTFIL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  162 FMGVALSITAFPVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLALAVALSGEGSSPLTSLWVFLSGCGFVLFCIFV 241
Cdd:PLN03159 172 FLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVLFCFYV 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  242 VQPGIKLIAKRCPEGEPVNELYVCCTLGIVLAASFVTDFIGIHALFGAFVIGVIFPKeGNFANALVEKVEDLVSGLFLPL 321
Cdd:PLN03159 252 VRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-GPLGVTLIEKLEDFVSGLLLPL 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  322 YFVSSGLKTNVATIQGAQSWGLLVLVIFNACFGKIIGTVLVSLYCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLN 401
Cdd:PLN03159 331 FFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLD 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  402 DQIFAIMVLMAIFTTFMTTPLVLAVYKPGKSLTKadYKNRTVEETnRSNKPLCLMFCFQSIMNIPTIVNLIEASRGiNRK 481
Cdd:PLN03159 411 DESFAVMVLVAVAMTALITPVVTVVYRPARRLVG--YKRRTIQRS-KHDAELRMLVCVHTPRNVPTIINLLEASHP-TKR 486
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  482 ENLSVYAMHLMELSERSSAILMAHKVRRNGLPfwnkdKSENNSSSSDMVVVAFEAFRR-LSRVSVRPMTAISPMATIHED 560
Cdd:PLN03159 487 SPICIYVLHLVELTGRASAMLIVHNTRKSGRP-----ALNRTQAQSDHIINAFENYEQhAGCVSVQPLTAISPYSTMHED 561
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  561 ICQSAERKKTAMVILPFHKHVRLDRTWETTRNDYRWINKKVMEESPCSVAILVDRGLGGTTRVASSDFSLTITVLFFGGN 640
Cdd:PLN03159 562 VCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVSHHVAVLFFGGP 641
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  641 DDREALAFAVRMAEHPGISLTVVRFIPSDEFK---------PENVRIEITEDQlcSGATRLIDIEAITELKAKIKEKESs 711
Cdd:PLN03159 642 DDREALAYAWRMSEHPGITLTVMRFIPGEDAAptasqpassPSDPRIPTVETD--GKKERQLDEEYINEFRARNAGNES- 718
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  712 rsnsdseshIIYEEKIVKCYEEVIEVIKEY-SKSNLFLVGKSP-EGS-VASGINVRSDTPELGPIGNLLTESESVSTVaS 788
Cdd:PLN03159 719 ---------IVYTEKVVSNGEETVAAIRSMdSAHDLFIVGRGQgMISpLTAGLTDWSECPELGAIGDLLASSDFAATV-S 788
                        810
                 ....*....|..
gi 15236572  789 VLVVQQYIASRP 800
Cdd:PLN03159 789 VLVVQQYVGTGP 800
KefB COG0475
Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism]; ...
30-428 1.95e-84

Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism];


Pssm-ID: 440243 [Multi-domain]  Cd Length: 384  Bit Score: 274.33  E-value: 1.95e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  30 LPLLILQICIVLLLTRLLAFLLRPLRQPRVIAEIVGGILLGPSALGkstkFINtvfppkSLTVLDTLANLGLIFFLFLVG 109
Cdd:COG0475   2 LASLLLQLGLLLLAAVLAGLLARRLGLPSVLGYILAGILLGPSGLG----LIE------DSEALELLAELGVVLLLFLIG 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 110 LELDPKSLKRTGKRALSIALAGITLPFVLGIGTSFALRSSIADGaskapflVFMGVALSITAFPVLARILAEIKLLTTDI 189
Cdd:COG0475  72 LELDLKRLRKMGRRALGIGLLQVLLPFLLGFLLALLLGLSLAAA-------LFLGAALAATSTAIVLKVLKELGLLKTPL 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 190 GKIALSAAAVNDVAAWILLALAVALSGEGSSPLTSLWVFLSGCGFVLFCIFVVQPGIKLIAKRCpEGEPVNELYVCCTLG 269
Cdd:COG0475 145 GQLILGVALFDDIAAILLLALVPALAGGGSVAGSLLLALLKALLFLALLLLVGRYLLRRLFRLV-ARTRSRELFLLFALL 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 270 IVLAASFVTDFIGIHALFGAFVIGVIFPkEGNFANALVEKVEDlVSGLFLPLYFVSSGLKTNVATIqgAQSWGLLVLVIF 349
Cdd:COG0475 224 LVLLAAALAELLGLSAALGAFLAGLVLA-ESEYRHELEEKIEP-FGDLFLPLFFVSVGLSLDLSAL--LSNPLLALLLVL 299
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15236572 350 NACFGKIIGTVLVSLYCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLNDQIFAIMVLMAIFTTFMTTPLVLAVYK 428
Cdd:COG0475 300 AAIVGKLLGAYLAARLFGLSRREALRIGLLLAPRGEFALVLASLGLSAGLISPELFAALVLVVLLTTLLTPLLLRLALR 378
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
37-417 1.06e-53

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 190.93  E-value: 1.06e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572    37 ICIVLLLTRLLAFLLRPLRQPRVIAEIVGGILLGPSALGkstkfintvFPPKSLTVLDTLANLGLIFFLFLVGLELDPKS 116
Cdd:pfam00999   1 IVLLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLG---------LISEVDEDLEVLSNLGLPPLLFLAGLELDLRE 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   117 LKRTGKRALSIALAGITLPFVLgigTSFALRSSIADGASKApfLVFMGVALSITAFPVLARILAEIKLLTTDIGKIALSA 196
Cdd:pfam00999  72 LRKNGGSILLLALLGVLIPFVL---IGLLLYLLGLGIPLLE--ALLFGAILSATSPVVVLAILKELGRVPERLGTLLLGE 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   197 AAVNDVAAWILLALAVALS---GEGSSPLTSLWVFLSGCGFVLFCIFVVQPGIKLIAKRCpegEPVNELYVCCTLGIVLA 273
Cdd:pfam00999 147 SVLNDGVAVVLLAVLLALAqgvGGGSDLGWLLLIFLVVAVGGLLLGLLIGWLLRLITRFT---DDDRELEVLLVLLLALL 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   274 ASFVTDFIGIHALFGAFVIGVIFPkEGNFANALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGaqSWGLLVLVIFNACF 353
Cdd:pfam00999 224 AALLAEALGVSGILGAFLAGLVLS-EYPFANKLSEKLEPFGYGLFNPLFFVLVGLSLDLSSLLL--SVWILVLLALVAIL 300
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15236572   354 -GKIIGTVLVSLYCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLNDQIFAIMVLMAIFTTF 417
Cdd:pfam00999 301 lGRFLGVFLLLRLLGLSLREALIIGFGGLQRGAVSLALAAIGPLLGIIARELYPLLIVVVLFTVL 365
PRK03562 PRK03562
glutathione-regulated potassium-efflux system protein KefC; Provisional
59-427 1.75e-14

glutathione-regulated potassium-efflux system protein KefC; Provisional


Pssm-ID: 235131 [Multi-domain]  Cd Length: 621  Bit Score: 77.34  E-value: 1.75e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   59 VIAEIVGGILLGPSALGKSTKfintvfppksltVLDTL--ANLGLIFFLFLVGLELDPK---SLKRT---GKRALSIALA 130
Cdd:PRK03562  32 VLGYLIAGCIIGPWGLRLVTD------------VESILhfAEFGVVLMLFVIGLELDPQrlwKLRRSifgGGALQMVACG 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  131 GITLPFVLGIGTSFalrssiadgasKAPFLVFMGVALSITAfpVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLAL 210
Cdd:PRK03562 100 GLLGLFCMLLGLRW-----------QVALLIGLGLALSSTA--IAMQAMNERNLMVTQMGRSAFAILLFQDIAAIPLVAM 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  211 AVALSGEGSSP------LTSLWVFLSGCGFVLFCIFVVQPGIKLIAKrcpEGEPvnELYVCCTLGIVLAASFVTDFIGIH 284
Cdd:PRK03562 167 IPLLAASGASTtlgafaLSALKVAGALALVVLGGRYVTRPALRFVAR---SGLR--EVFTAVALFLVFGFGLLMEEVGLS 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  285 ALFGAFVIGVIFpKEGNFANALVEKVEDLvSGLFLPLYFVSSGLKTNVATIQgAQSWGLLVLVifnACFGKIIGTVLVSL 364
Cdd:PRK03562 242 MALGAFLAGVLL-ASSEYRHALESDIEPF-KGLLLGLFFIAVGMSIDFGTLL-ENPLRILILL---LGFLAIKIAMLWLL 315
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15236572  365 --YCKVPLDQSLALGFLMNTKGLVELIVLNIGKDRGVLNDQIFAIMVLmAIFTTFMTTPLVLAVY 427
Cdd:PRK03562 316 arPLGVPRKQRRWFAVLLGQGGEFAFVVFGAAQMANVLEPEWAKLLTL-AVALSMAATPLLLVLL 379
PRK03659 PRK03659
glutathione-regulated potassium-efflux system protein KefB; Provisional
59-424 3.82e-14

glutathione-regulated potassium-efflux system protein KefB; Provisional


Pssm-ID: 179625 [Multi-domain]  Cd Length: 601  Bit Score: 76.22  E-value: 3.82e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   59 VIAEIVGGILLGPSALGkstkFINTVfppksltvlDTL---ANLGLIFFLFLVGLELDPKSLKRTGKRALSIALAGITLP 135
Cdd:PRK03659  32 VLGYLLAGIAIGPWGLG----FISDV---------DEIlhfSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLS 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  136 FVLGIG----TSFALRSSIADGaskapflvfMGVALSITAFPVlaRILAEIKLLTTDIGKIALSAAAVNDVAAWILLALA 211
Cdd:PRK03659  99 AAVLAGllmlTDFSWQAAVVGG---------IGLAMSSTAMAL--QLMREKGMNRSESGQLGFSVLLFQDLAVIPALALV 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  212 VALSGEGSSP---LTSLWVFLSGCGFVLFCIFVVQPGIKLIAKrcpegEPVNELYVCCTLGIVLAASFVTDFIGIHALFG 288
Cdd:PRK03659 168 PLLAGSADEHfdwMKIGMKVLAFAGMLIGGRYLLRPLFRFIAA-----SGVREVFTAAALLLVLGSALFMDALGLSMALG 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  289 AFVIGVIFpKEGNFANALvEKVEDLVSGLFLPLYFVSSGLKTNVATIQGAQSW---GLLVLVIfnacfgkIIGTVLVSLY 365
Cdd:PRK03659 243 TFIAGVLL-AESEYRHEL-EIAIEPFKGLLLGLFFISVGMALNLGVLYTHLLWvliSVVVLVA-------VKGLVLYLLA 313
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15236572  366 CKVPLDQSLALGF--LMNTKGLVELIVLNIGKDRGVLNDQIFAIMvLMAIFTTFMTTPLVL 424
Cdd:PRK03659 314 RLYGLRSSERMQFagVLSQGGEFAFVLFSAASSQRLLQGDQMALL-LVVVTLSMMTTPLLM 373
PRK10669 PRK10669
putative cation:proton antiport protein; Provisional
54-295 6.47e-07

putative cation:proton antiport protein; Provisional


Pssm-ID: 182633 [Multi-domain]  Cd Length: 558  Bit Score: 52.79  E-value: 6.47e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572   54 LRQPRVIAEIVGGILLGPSALGkstkFI-NTVFPPKsltvldtLANLGLIFFLFLVGLELDPKSLKRTGKRALSIALAGI 132
Cdd:PRK10669  28 LRISPLVGYLLAGVLAGPFTPG----FVaDTKLAPE-------LAELGVILLMFGVGLHFSLKDLMAVKSIAIPGAIAQI 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  133 TLPFVLGIGTSFALRSSIADGaskapfLVFmGVALSITAFPVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLALAV 212
Cdd:PRK10669  97 AVATLLGMALSAVLGWSLMTG------IVF-GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLP 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  213 ALSGEGSSPLTSLWVFLSGCGF-----VLFCIFVVQPGIKLI----AKRCPEGEpvNELYVCCTLGIVLAASF--VTDFI 281
Cdd:PRK10669 170 AVAGMMEQGDVGFATLAVDLGItigkvIAFIAIMMLVGRRLVpwilARSAATGS--RELFTLSVLALALGIAFgaVELFD 247
                        250
                 ....*....|....
gi 15236572  282 GIHALfGAFVIGVI 295
Cdd:PRK10669 248 VSFAL-GAFFAGMV 260
NhaP COG0025
NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];
54-296 1.47e-05

NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 439796 [Multi-domain]  Cd Length: 506  Bit Score: 48.42  E-value: 1.47e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572  54 LRQPRVIAEIVGGILLGPsalgkstkFINTVFPPkSLTVLDTLANLGLIFFLFLVGLELDPKSLKRTGKRA--------- 124
Cdd:COG0025  24 LKLPAPLLLLLAGILLGP--------GLGLELDP-ELGDLEPLLELFLPPLLFEAALNLDLRELRRNGRPIlrlavvgvl 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 125 LSIALAGITLPFVLGI--GTSFALrssiadgaskapflvfmGVALSIT----AFPVLARILAEIKLLTtdigkiALSA-A 197
Cdd:COG0025  95 LTTLAVALAAHWLLGLplAAALLL-----------------GAILAPTdpvaVSPILRRLGVPKRLRT------ILEGeS 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15236572 198 AVNDVAAWILLALAVA-LSGEGSSPLTSLWVFLSGCGFVLFCIFVVQPGIKLIAKRCPegEPVNELYVccTLGIVLAASF 276
Cdd:COG0025 152 LLNDATALVLFVLALAaALGGGFSLGEALLDFLLAILGGILVGLLLGWLLGRLLRRLP--DPLLEILL--TLALPFLAYL 227
                       250       260
                ....*....|....*....|
gi 15236572 277 VTDFIGIHALFGAFVIGVIF 296
Cdd:COG0025 228 LAEALHGSGVLAVVVAGLVL 247
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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