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Conserved domains on  [gi|30690854|ref|NP_195425|]
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ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547) [Arabidopsis thaliana]

Protein Classification

DUF547 domain-containing protein( domain architecture ID 10344219)

DUF547 domain-containing protein may also contain a partial Leucine-zipper MIP1 domain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 393-518 1.87e-54

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


:

Pssm-ID: 461427  Cd Length: 119  Bit Score: 180.47  E-value: 1.87e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30690854   393 HQQKLAFWINTYNSCVMNAFLEHGIPATPEMVVALMQKATIIVGGHSLNAITIEHFILRLPYHLKFTCPKTatheemrAH 472
Cdd:pfam04784   1 REEKLAFWINLYNALTIHAILYPGIPPSPWKRRSLFDKAAYNIGGHKYSLDDIEHGILRGNPSNLKKPFGD-------PR 73

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 30690854   473 STFGLEWSEPLVTFALACGSWSSPAVRVYTAANVEEELEAAKRDYL 518
Cdd:pfam04784  74 RKYALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAREFL 119
Lzipper-MIP1 super family cl16848
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 38-102 1.92e-07

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


The actual alignment was detected with superfamily member pfam14389:

Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 48.70  E-value: 1.92e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30690854    38 ANKEKKMDLLQDVDKLKRKLRQEENVHRALERAFT-RPLGALPRLPSYLPRHTLELLAEVAVLEEE 102
Cdd:pfam14389   1 ALNEKRSSLEQEVEQLQEQLQDEEDLRRALEKALSnSPDGSLPSLSSLLPPKAKELLAEIAVLEAE 66
 
Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 393-518 1.87e-54

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


Pssm-ID: 461427  Cd Length: 119  Bit Score: 180.47  E-value: 1.87e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30690854   393 HQQKLAFWINTYNSCVMNAFLEHGIPATPEMVVALMQKATIIVGGHSLNAITIEHFILRLPYHLKFTCPKTatheemrAH 472
Cdd:pfam04784   1 REEKLAFWINLYNALTIHAILYPGIPPSPWKRRSLFDKAAYNIGGHKYSLDDIEHGILRGNPSNLKKPFGD-------PR 73

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 30690854   473 STFGLEWSEPLVTFALACGSWSSPAVRVYTAANVEEELEAAKRDYL 518
Cdd:pfam04784  74 RKYALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAREFL 119
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 38-102 1.92e-07

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 48.70  E-value: 1.92e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30690854    38 ANKEKKMDLLQDVDKLKRKLRQEENVHRALERAFT-RPLGALPRLPSYLPRHTLELLAEVAVLEEE 102
Cdd:pfam14389   1 ALNEKRSSLEQEVEQLQEQLQDEEDLRRALEKALSnSPDGSLPSLSSLLPPKAKELLAEIAVLEAE 66
 
Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 393-518 1.87e-54

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


Pssm-ID: 461427  Cd Length: 119  Bit Score: 180.47  E-value: 1.87e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30690854   393 HQQKLAFWINTYNSCVMNAFLEHGIPATPEMVVALMQKATIIVGGHSLNAITIEHFILRLPYHLKFTCPKTatheemrAH 472
Cdd:pfam04784   1 REEKLAFWINLYNALTIHAILYPGIPPSPWKRRSLFDKAAYNIGGHKYSLDDIEHGILRGNPSNLKKPFGD-------PR 73

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 30690854   473 STFGLEWSEPLVTFALACGSWSSPAVRVYTAANVEEELEAAKRDYL 518
Cdd:pfam04784  74 RKYALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAREFL 119
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 38-102 1.92e-07

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 48.70  E-value: 1.92e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30690854    38 ANKEKKMDLLQDVDKLKRKLRQEENVHRALERAFT-RPLGALPRLPSYLPRHTLELLAEVAVLEEE 102
Cdd:pfam14389   1 ALNEKRSSLEQEVEQLQEQLQDEEDLRRALEKALSnSPDGSLPSLSSLLPPKAKELLAEIAVLEAE 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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