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Conserved domains on  [gi|15240707|ref|NP_196884|]
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pheophytinase [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02578 super family cl33521
hydrolase
93-411 1.40e-42

hydrolase


The actual alignment was detected with superfamily member PLN02578:

Pssm-ID: 215315 [Multi-domain]  Cd Length: 354  Bit Score: 154.61  E-value: 1.40e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   93 HSHCEWKPKlRVHYEKAGcdnlDAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGqglslptedpttmteetsss 172
Cdd:PLN02578  68 YNFWTWRGH-KIHYVVQG----EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLG-------------------- 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  173 edkepfwgFGdktepWADQLVFSLD--LWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATpfw 250
Cdd:PLN02578 123 --------FG-----WSDKALIEYDamVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA--- 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  251 GFFPNPVRSPKLARL-----FPWPGAFPLPERVKKITE--LVWQkISDPESIAEILKQVYTDHSiNVDK-VFSRIVEVTQ 322
Cdd:PLN02578 187 GQFGSESREKEEAIVveetvLTRFVVKPLKEWFQRVVLgfLFWQ-AKQPSRIESVLKSVYKDKS-NVDDyLVESITEPAA 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  323 HPAAAASFASIM---LAPGGELSFSEALS--RCKennvqICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISpAGHCPHD 397
Cdd:PLN02578 265 DPNAGEVYYRLMsrfLFNQSRYTLDSLLSklSCP-----LLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQ-AGHCPHD 338
                        330
                 ....*....|....
gi 15240707  398 EVPEVVNYLMRGWI 411
Cdd:PLN02578 339 EVPEQVNKALLEWL 352
 
Name Accession Description Interval E-value
PLN02578 PLN02578
hydrolase
93-411 1.40e-42

hydrolase


Pssm-ID: 215315 [Multi-domain]  Cd Length: 354  Bit Score: 154.61  E-value: 1.40e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   93 HSHCEWKPKlRVHYEKAGcdnlDAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGqglslptedpttmteetsss 172
Cdd:PLN02578  68 YNFWTWRGH-KIHYVVQG----EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLG-------------------- 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  173 edkepfwgFGdktepWADQLVFSLD--LWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATpfw 250
Cdd:PLN02578 123 --------FG-----WSDKALIEYDamVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA--- 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  251 GFFPNPVRSPKLARL-----FPWPGAFPLPERVKKITE--LVWQkISDPESIAEILKQVYTDHSiNVDK-VFSRIVEVTQ 322
Cdd:PLN02578 187 GQFGSESREKEEAIVveetvLTRFVVKPLKEWFQRVVLgfLFWQ-AKQPSRIESVLKSVYKDKS-NVDDyLVESITEPAA 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  323 HPAAAASFASIM---LAPGGELSFSEALS--RCKennvqICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISpAGHCPHD 397
Cdd:PLN02578 265 DPNAGEVYYRLMsrfLFNQSRYTLDSLLSklSCP-----LLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQ-AGHCPHD 338
                        330
                 ....*....|....
gi 15240707  398 EVPEVVNYLMRGWI 411
Cdd:PLN02578 339 EVPEQVNKALLEWL 352
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
102-414 3.94e-33

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 125.11  E-value: 3.94e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 102 LRVHYEKAGCDnldAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGQGLSLPTEDPttmteetsssedkepfwgf 181
Cdd:COG0596  12 VRLHYREAGPD---GPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDKPAGG------------------- 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 182 gdktepwadqlvFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNatpfwgffpnpvrspk 261
Cdd:COG0596  70 ------------YTLDDLADDLAALLDALGLERVVLVGHSMGGMVALELAARHPERVAGLVLVD---------------- 121
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 262 larlfpwpgafplpERVKKITELVWQKISDPESIAEILKQVYTDhsinvdkvfsrivevtqhpaaaasfasimlapggel 341
Cdd:COG0596 122 --------------EVLAALAEPLRRPGLAPEALAALLRALART------------------------------------ 151
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15240707 342 SFSEALSRCKennVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISPAGHCPHDEVPEVVNYLMRGWIKHL 414
Cdd:COG0596 152 DLRERLARIT---VPTLVIWGEKDPIVPPALARRLAELLPNAELVVLPGAGHFPPLEQPEAFAAALRDFLARL 221
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
117-398 3.53e-14

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 72.15  E-value: 3.53e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   117 PAVLFLPGFGvGSFH-YEKQLTDLGRD-YRVWAIDFLGQGLSLPTEDPTTMTeetsssedkepFWGFgdktepwadqlvf 194
Cdd:pfam00561   1 PPVLLLHGLP-GSSDlWRKLAPALARDgFRVIALDLRGFGKSSRPKAQDDYR-----------TDDL------------- 55
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   195 sldlwRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATPfWGFFPNPVRSPKLARLFPWPGAFPL 274
Cdd:pfam00561  56 -----AEDLEYILEALGLEKVNLVGHSMGGLIALAYAAKYPDRVKALVLLGALD-PPHELDEADRFILALFPGFFDGFVA 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   275 PERVKKITELvWQKISdpesiaeILKQVYTDHSINVDKVFSRIVEVTQHPAaaasfasIMLAPGGELSFSEALSRCK--- 351
Cdd:pfam00561 130 DFAPNPLGRL-VAKLL-------ALLLLRLRLLKALPLLNKRFPSGDYALA-------KSLVTGALLFIETWSTELRakf 194
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 15240707   352 --ENNVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISPAGHCPHDE 398
Cdd:pfam00561 195 lgRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARLVVIPDAGHFAFLE 243
bioH TIGR01738
pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for ...
180-395 6.52e-05

pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam00561). Members of this family are restricted to the Proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]


Pssm-ID: 273783 [Multi-domain]  Cd Length: 245  Bit Score: 44.42  E-value: 6.52e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   180 GFGDKTEpwadqlVFSLDLwrDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNAtpfwgffpnpvrS 259
Cdd:TIGR01738  40 GHGRSRG------FGPLSL--ADMAEAIAAQAPDPAIWLGWSLGGLVALHIAATHPDRVRALVTVAS------------S 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   260 PKLARLFPWPGAFPLPervkKITELVWQKISDPESIAEILKQVYTDHSINVD---KVFSRIVEVTQHPAAAAsfasimLA 336
Cdd:TIGR01738 100 PCFSAREDWPEGIKPD----VLTGFQQQLSDDYQRTIERFLALQTLGTPTARqdaRALKQTLLARPTPNVQV------LQ 169
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   337 PGGELSFSEALSRCKEN-NVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISPAGHCP 395
Cdd:TIGR01738 170 AGLEILATVDLRQPLQNiSVPFLRLYGYLDGLVPAKVVPMLDKLAPHSELYIFAKAAHAP 229
 
Name Accession Description Interval E-value
PLN02578 PLN02578
hydrolase
93-411 1.40e-42

hydrolase


Pssm-ID: 215315 [Multi-domain]  Cd Length: 354  Bit Score: 154.61  E-value: 1.40e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   93 HSHCEWKPKlRVHYEKAGcdnlDAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGqglslptedpttmteetsss 172
Cdd:PLN02578  68 YNFWTWRGH-KIHYVVQG----EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLG-------------------- 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  173 edkepfwgFGdktepWADQLVFSLD--LWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATpfw 250
Cdd:PLN02578 123 --------FG-----WSDKALIEYDamVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA--- 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  251 GFFPNPVRSPKLARL-----FPWPGAFPLPERVKKITE--LVWQkISDPESIAEILKQVYTDHSiNVDK-VFSRIVEVTQ 322
Cdd:PLN02578 187 GQFGSESREKEEAIVveetvLTRFVVKPLKEWFQRVVLgfLFWQ-AKQPSRIESVLKSVYKDKS-NVDDyLVESITEPAA 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  323 HPAAAASFASIM---LAPGGELSFSEALS--RCKennvqICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISpAGHCPHD 397
Cdd:PLN02578 265 DPNAGEVYYRLMsrfLFNQSRYTLDSLLSklSCP-----LLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQ-AGHCPHD 338
                        330
                 ....*....|....
gi 15240707  398 EVPEVVNYLMRGWI 411
Cdd:PLN02578 339 EVPEQVNKALLEWL 352
PLN02824 PLN02824
hydrolase, alpha/beta fold family protein
88-407 2.54e-34

hydrolase, alpha/beta fold family protein


Pssm-ID: 178419 [Multi-domain]  Cd Length: 294  Bit Score: 130.63  E-value: 2.54e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   88 AARISHSHCEWKPK-LRVHYEKAGCDnldAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGqglslptedpttmt 166
Cdd:PLN02824   3 KPEPQVETRTWRWKgYNIRYQRAGTS---GPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLG-------------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  167 eetsssedkepfWGFGDKTEPWA--DQLVFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLL 244
Cdd:PLN02824  66 ------------YGYSDKPNPRSapPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLI 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  245 N--------------ATPFWGFFPNPVRSPKLARLFpwpgafplpervkkitelvWQKISDPESIAEILKQVYTDHSINV 310
Cdd:PLN02824 134 NislrglhikkqpwlGRPFIKAFQNLLRETAVGKAF-------------------FKSVATPETVKNILCQCYHDDSAVT 194
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  311 DKVFSRIVEVTQHPAAAASFASIMLAPGGELSfSEALSRCKennVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISP 390
Cdd:PLN02824 195 DELVEAILRPGLEPGAVDVFLDFISYSGGPLP-EELLPAVK---CPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPG 270
                        330
                 ....*....|....*..
gi 15240707  391 AGHCPHDEVPEVVNYLM 407
Cdd:PLN02824 271 VGHCPQDEAPELVNPLI 287
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
102-414 3.94e-33

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 125.11  E-value: 3.94e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 102 LRVHYEKAGCDnldAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGQGLSLPTEDPttmteetsssedkepfwgf 181
Cdd:COG0596  12 VRLHYREAGPD---GPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDKPAGG------------------- 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 182 gdktepwadqlvFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNatpfwgffpnpvrspk 261
Cdd:COG0596  70 ------------YTLDDLADDLAALLDALGLERVVLVGHSMGGMVALELAARHPERVAGLVLVD---------------- 121
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 262 larlfpwpgafplpERVKKITELVWQKISDPESIAEILKQVYTDhsinvdkvfsrivevtqhpaaaasfasimlapggel 341
Cdd:COG0596 122 --------------EVLAALAEPLRRPGLAPEALAALLRALART------------------------------------ 151
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15240707 342 SFSEALSRCKennVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISPAGHCPHDEVPEVVNYLMRGWIKHL 414
Cdd:COG0596 152 DLRERLARIT---VPTLVIWGEKDPIVPPALARRLAELLPNAELVVLPGAGHFPPLEQPEAFAAALRDFLARL 221
PLN02679 PLN02679
hydrolase, alpha/beta fold family protein
97-416 5.37e-24

hydrolase, alpha/beta fold family protein


Pssm-ID: 178283 [Multi-domain]  Cd Length: 360  Bit Score: 103.00  E-value: 5.37e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   97 EWKPKLRVHYEKAGCDNLDA--PAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGQGLSlptedpttmteetssseD 174
Cdd:PLN02679  67 KWKGEYSINYLVKGSPEVTSsgPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGAS-----------------D 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  175 KEPfwGFGDKTEPWADQLvfsLDlwrdqvqyFVEEVIGEPVYIAGNSLGGYVALYFAA-THPHLVKGVTLLNATpfwGFF 253
Cdd:PLN02679 130 KPP--GFSYTMETWAELI---LD--------FLEEVVQKPTVLIGNSVGSLACVIAASeSTRDLVRGLVLLNCA---GGM 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  254 PNP--VRSPKLARLFP--WPGAFPLPERvkKITELVWQKISDPESIAEILKQVYTdhsiNVDKVFSRIVEVTQHPA---- 325
Cdd:PLN02679 194 NNKavVDDWRIKLLLPllWLIDFLLKQR--GIASALFNRVKQRDNLKNILLSVYG----NKEAVDDELVEIIRGPAddeg 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  326 AAASFASIMLAPGGelsfSEALSRCKENNVQICLMYGREDPWVrPLWG------KKIKKEIPNAPYYEISPAGHCPHDEV 399
Cdd:PLN02679 268 ALDAFVSIVTGPPG----PNPIKLIPRISLPILVLWGDQDPFT-PLDGpvgkyfSSLPSQLPNVTLYVLEGVGHCPHDDR 342
                        330
                 ....*....|....*..
gi 15240707  400 PEVVNYLMRGWIKHLES 416
Cdd:PLN02679 343 PDLVHEKLLPWLAQLPS 359
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
102-308 7.28e-15

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 73.50  E-value: 7.28e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 102 LRVHYEKAGCDNLDAPAVLFLPGFGVGSFHYEKQLTDL-GRDYRVWAIDFLGQGLSlptedpttmteetsssedkepfwg 180
Cdd:COG2267  14 LRLRGRRWRPAGSPRGTVVLVHGLGEHSGRYAELAEALaAAGYAVLAFDLRGHGRS------------------------ 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 181 fgdktePWADQLVFSLDLWRDQVQYFVEEVI---GEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNatpfwgffPNPV 257
Cdd:COG2267  70 ------DGPRGHVDSFDDYVDDLRAALDALRarpGLPVVLLGHSMGGLIALLYAARYPDRVAGLVLLA--------PAYR 135
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 15240707 258 RSPKLARLFPWPGAFPLPERVKKITE--LVWQ----KISDPESIAEILKQVYTDHSI 308
Cdd:COG2267 136 ADPLLGPSARWLRALRLAEALARIDVpvLVLHggadRVVPPEAARRLAARLSPDVEL 192
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
117-398 3.53e-14

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 72.15  E-value: 3.53e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   117 PAVLFLPGFGvGSFH-YEKQLTDLGRD-YRVWAIDFLGQGLSLPTEDPTTMTeetsssedkepFWGFgdktepwadqlvf 194
Cdd:pfam00561   1 PPVLLLHGLP-GSSDlWRKLAPALARDgFRVIALDLRGFGKSSRPKAQDDYR-----------TDDL------------- 55
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   195 sldlwRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATPfWGFFPNPVRSPKLARLFPWPGAFPL 274
Cdd:pfam00561  56 -----AEDLEYILEALGLEKVNLVGHSMGGLIALAYAAKYPDRVKALVLLGALD-PPHELDEADRFILALFPGFFDGFVA 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   275 PERVKKITELvWQKISdpesiaeILKQVYTDHSINVDKVFSRIVEVTQHPAaaasfasIMLAPGGELSFSEALSRCK--- 351
Cdd:pfam00561 130 DFAPNPLGRL-VAKLL-------ALLLLRLRLLKALPLLNKRFPSGDYALA-------KSLVTGALLFIETWSTELRakf 194
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 15240707   352 --ENNVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISPAGHCPHDE 398
Cdd:pfam00561 195 lgRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARLVVIPDAGHFAFLE 243
PLN02894 PLN02894
hydrolase, alpha/beta fold family protein
115-393 4.59e-09

hydrolase, alpha/beta fold family protein


Pssm-ID: 215484 [Multi-domain]  Cd Length: 402  Bit Score: 58.38  E-value: 4.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  115 DAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGQGLSLPTEDPTTMTEEtsssedkepfwgfgdkTEPWadqLVF 194
Cdd:PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEE----------------TEAW---FID 164
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  195 SLDLWRDQVQyfVEEVIgepvyIAGNSLGGYVALYFAATHPHLVKGVTLLNATpfwGFFPNPVRSPKLARLF--PWPGAf 272
Cdd:PLN02894 165 SFEEWRKAKN--LSNFI-----LLGHSFGGYVAAKYALKHPEHVQHLILVGPA---GFSSESDDKSEWLTKFraTWKGA- 233
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  273 plpervkkITELVWQKISDPESI-------AEILKQVYT-----DHSINV------DKVFSRIVEVTQHPAAAASFASIM 334
Cdd:PLN02894 234 --------VLNHLWESNFTPQKIirglgpwGPNLVRRYTtarfgAHSTGDilseeeSKLLTDYVYHTLAAKASGELCLKY 305
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  335 LAPGGELSFSEALSRCKENNVQICLMYGREDpWVRPLWGKKIKKEIPNAPYYEISP-AGH 393
Cdd:PLN02894 306 IFSFGAFARKPLLESASEWKVPTTFIYGRHD-WMNYEGAVEARKRMKVPCEIIRVPqGGH 364
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
119-404 2.09e-08

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 54.40  E-value: 2.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   119 VLFLPGFGVGSFHYEKQLtdlGRDYRVWAIDFLGQGLSLPTEDPttmteetsssedkepfwgfgdktepWADQlvfsldl 198
Cdd:pfam12697   1 VVLVHGAGLSAAPLAALL---AAGVAVLAPDLPGHGSSSPPPLD-------------------------LADL------- 45
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   199 wRDQVQYFVEEVIGEPVYIAGNSLGGYVALyfAATHPHLVKGVtLLNATpfwgFFPNPVRSPKLARLFPWPGAFPLPErv 278
Cdd:pfam12697  46 -ADLAALLDELGAARPVVLVGHSLGGAVAL--AAAAAALVVGV-LVAPL----AAPPGLLAALLALLARLGAALAAPA-- 115
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   279 kkitelvWqkisdpeSIAEILKQVYTDHSINVDKVFSRIVEVTQHPAAAASFASIMLAPGGELsfsealsrckennvqiC 358
Cdd:pfam12697 116 -------W-------LAAESLARGFLDDLPADAEWAAALARLAALLAALALLPLAAWRDLPVP----------------V 165
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 15240707   359 LMYGREDPWVRPLWGkKIKKEIPNAPYYEISPAGHCPHDEvPEVVN 404
Cdd:pfam12697 166 LVLAEEDRLVPELAQ-RLLAALAGARLVVLPGAGHLPLDD-PEEVA 209
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
118-268 3.05e-07

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 51.45  E-value: 3.05e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   118 AVLFLPGFG--VGSF-HYEKQLTDLGrdYRVWAIDFLGQGLSlpteDPTTMTEEtsssedkepfwGFgdktepwaDQLVf 194
Cdd:pfam12146   6 VVVLVHGLGehSGRYaHLADALAAQG--FAVYAYDHRGHGRS----DGKRGHVP-----------SF--------DDYV- 59
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15240707   195 sLDLwRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLnATPFW---GFFPNPVR--SPKLARLFPW 268
Cdd:pfam12146  60 -DDL-DTFVDKIREEHPGLPLFLLGHSMGGLIAALYALRYPDKVDGLILS-APALKikpYLAPPILKllAKLLGKLFPR 135
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
117-268 6.17e-06

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 47.32  E-value: 6.17e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 117 PAVLFLPGFG----VGSFHYEKQLTDLGrdYRVWAIDFLGQGLSlptedpttmteetsssedkEPFWGFGDktepWADQL 192
Cdd:COG1506  24 PVVVYVHGGPgsrdDSFLPLAQALASRG--YAVLAPDYRGYGES-------------------AGDWGGDE----VDDVL 78
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15240707 193 VFsldlwrdqVQYFVEE--VIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNA-TPFWGFFPNPVRSPKLARLFPW 268
Cdd:COG1506  79 AA--------IDYLAARpyVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGvSDLRSYYGTTREYTERLMGGPW 149
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
186-404 6.78e-06

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 47.24  E-value: 6.78e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 186 EPWADQLVFSLDLWRDQVQYFVEEV--IGEPVYIAGNSLGGYVALYFAATHPHlVKGVTLLNAtPFwgFFPNPvrspkLA 263
Cdd:COG1647  55 TSPEDLLKTTWEDWLEDVEEAYEILkaGYDKVIVIGLSMGGLLALLLAARYPD-VAGLVLLSP-AL--KIDDP-----SA 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707 264 RLFPWpgafplperVKKITELVWQKISDPESIaEILKQVYTDHSINVDKVFSRIVEVTQHPaaaasFASImlapggelsf 343
Cdd:COG1647 126 PLLPL---------LKYLARSLRGIGSDIEDP-EVAEYAYDRTPLRALAELQRLIREVRRD-----LPKI---------- 180
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15240707 344 sealsrckenNVQICLMYGREDPWVRPLWGKKIKKEIPNAP--YYEISPAGH--CPHDEVPEVVN 404
Cdd:COG1647 181 ----------TAPTLIIQSRKDEVVPPESARYIYERLGSPDkeLVWLEDSGHviTLDKDREEVAE 235
bioH TIGR01738
pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for ...
180-395 6.52e-05

pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam00561). Members of this family are restricted to the Proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]


Pssm-ID: 273783 [Multi-domain]  Cd Length: 245  Bit Score: 44.42  E-value: 6.52e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   180 GFGDKTEpwadqlVFSLDLwrDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNAtpfwgffpnpvrS 259
Cdd:TIGR01738  40 GHGRSRG------FGPLSL--ADMAEAIAAQAPDPAIWLGWSLGGLVALHIAATHPDRVRALVTVAS------------S 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   260 PKLARLFPWPGAFPLPervkKITELVWQKISDPESIAEILKQVYTDHSINVD---KVFSRIVEVTQHPAAAAsfasimLA 336
Cdd:TIGR01738 100 PCFSAREDWPEGIKPD----VLTGFQQQLSDDYQRTIERFLALQTLGTPTARqdaRALKQTLLARPTPNVQV------LQ 169
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707   337 PGGELSFSEALSRCKEN-NVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISPAGHCP 395
Cdd:TIGR01738 170 AGLEILATVDLRQPLQNiSVPFLRLYGYLDGLVPAKVVPMLDKLAPHSELYIFAKAAHAP 229
Fes COG2382
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];
204-260 5.74e-04

Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];


Pssm-ID: 441948 [Multi-domain]  Cd Length: 314  Bit Score: 41.76  E-value: 5.74e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15240707 204 QYFVEEVI------------GEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATPFWGFFPNPVRSP 260
Cdd:COG2382 175 RFLAEELIpfveknyrvsadPEHRAIAGLSMGGLAALYAALRHPDLFGYVGSFSGSFWWPPGDADRGGW 243
YpfH COG0400
Predicted esterase [General function prediction only];
200-260 8.93e-04

Predicted esterase [General function prediction only];


Pssm-ID: 440169 [Multi-domain]  Cd Length: 200  Bit Score: 40.66  E-value: 8.93e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15240707 200 RDQVQYFVEEVIG------EPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNatpfwGFFPNPVRSP 260
Cdd:COG0400  70 AEALAAFIDELEArygidpERIVLAGFSQGAAMALSLALRRPELLAGVVALS-----GYLPGEEALP 131
PLN03084 PLN03084
alpha/beta hydrolase fold protein; Provisional
113-245 1.14e-03

alpha/beta hydrolase fold protein; Provisional


Pssm-ID: 178633  Cd Length: 383  Bit Score: 41.02  E-value: 1.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240707  113 NLDAPAVLFLPGFGVGSFHYEKQLTDLGRDYRVWAIDFLGQGLSlptedpttmteetssseDKePFWGFGdktepwadqL 192
Cdd:PLN03084 124 SNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFS-----------------DK-PQPGYG---------F 176
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 15240707  193 VFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLN 245
Cdd:PLN03084 177 NYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLN 229
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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