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Conserved domains on  [gi|42567849|ref|NP_196958|]
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basic salivary proline-rich-like protein (DUF1421) [Arabidopsis thaliana]

Protein Classification

UBA-like domain-containing protein( domain architecture ID 12073806)

UBA-like domain-containing protein, formerly called DUF1421 domain-containing protein

PubMed:  26228684

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1421 pfam07223
UBA-like domain (DUF1421); This domain represents a conserved region that has a UBA like fold. ...
 483-527 4.78e-18

UBA-like domain (DUF1421); This domain represents a conserved region that has a UBA like fold. It is found in a number of plant proteins of unknown function.


:

Pssm-ID: 399892  Cd Length: 45  Bit Score: 77.83  E-value: 4.78e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 42567849   483 VDDVIDKVVSMGFPRDQVRGTVRTLTENGQAVDLNVVLDKLMNGD 527
Cdd:pfam07223   1 YGDMIDKVVSMGFPGDHVRSMILRMVEAGQPVDFNVVLDRLSSGS 45
 
Name Accession Description Interval E-value
DUF1421 pfam07223
UBA-like domain (DUF1421); This domain represents a conserved region that has a UBA like fold. ...
 483-527 4.78e-18

UBA-like domain (DUF1421); This domain represents a conserved region that has a UBA like fold. It is found in a number of plant proteins of unknown function.


Pssm-ID: 399892  Cd Length: 45  Bit Score: 77.83  E-value: 4.78e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 42567849   483 VDDVIDKVVSMGFPRDQVRGTVRTLTENGQAVDLNVVLDKLMNGD 527
Cdd:pfam07223   1 YGDMIDKVVSMGFPGDHVRSMILRMVEAGQPVDFNVVLDRLSSGS 45
 
Name Accession Description Interval E-value
DUF1421 pfam07223
UBA-like domain (DUF1421); This domain represents a conserved region that has a UBA like fold. ...
 483-527 4.78e-18

UBA-like domain (DUF1421); This domain represents a conserved region that has a UBA like fold. It is found in a number of plant proteins of unknown function.


Pssm-ID: 399892  Cd Length: 45  Bit Score: 77.83  E-value: 4.78e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 42567849   483 VDDVIDKVVSMGFPRDQVRGTVRTLTENGQAVDLNVVLDKLMNGD 527
Cdd:pfam07223   1 YGDMIDKVVSMGFPGDHVRSMILRMVEAGQPVDFNVVLDRLSSGS 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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