|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
221-521 |
2.59e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.97 E-value: 2.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 221 KERKKREEVIERGNRERsELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKER 300
Cdd:COG1196 219 KEELKELEAELLLLKLR-ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 301 EGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNEL 380
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 381 VQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEVERDNAGKALDEEKRNMVALKEK 460
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE 457
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15240907 461 VVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRATGVLK 521
Cdd:COG1196 458 EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
255-530 |
7.20e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.46 E-value: 7.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 255 KREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKE 334
Cdd:TIGR02168 676 RREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 335 KTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYND 414
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAA 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 415 QIKNGEKLNCNVSQLKDALALVEVERDNAGKALDEEKRNMVAL-------KEKVVALEKTNEATGKELEKIKAERGRLIK 487
Cdd:TIGR02168 836 TERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALlneraslEEALALLRSELEELSEELRELESKRSELRR 915
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 15240907 488 EKKELENRSESLRNEKAILQKDIVELK-RATGVLKTELESAGTN 530
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGLEVRIDNLQeRLSEEYSLTLEEAEAL 959
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
29-396 |
1.05e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 1.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 29 SQKSTKLSRESSMEDHdssEEKFQNLKSLNAILLKQTMEKRQQIESLFQAKDSLEIELVRSGKEKTLLREELcgssdENF 108
Cdd:TIGR02168 667 KTNSSILERRREIEEL---EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDL-----ARL 738
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 109 MLKIEMdllmgfVEGRVKEMGVEVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEM 188
Cdd:TIGR02168 739 EAEVEQ------LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL 812
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 189 NLLKESVVRLEMREVSLGEEVGRLKCENGRLVKERKKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEV 268
Cdd:TIGR02168 813 TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 269 EMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVK-ESELEGLMV 347
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKiEDDEEEARR 972
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 15240907 348 ENNSIKKEIE-------MAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSK 396
Cdd:TIGR02168 973 RLKRLENKIKelgpvnlAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDR 1028
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
197-483 |
3.33e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.95 E-value: 3.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 197 RLEMREVSLGEEVGRLKCENGRLVKERKKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQR 276
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 277 EMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEI 356
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 357 EMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALV 436
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 15240907 437 EVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERG 483
Cdd:COG1196 476 EAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGL 522
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
158-501 |
8.78e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 8.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 158 RKLESEREEFSRVCD-----ERDLVKsgFDLQSEEMNLLKEsvVRLEMREVSLGEEVGRLKcengRLVKERKKREEVIER 232
Cdd:TIGR02168 179 RKLERTRENLDRLEDilnelERQLKS--LERQAEKAERYKE--LKAELRELELALLVLRLE----ELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 233 GNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEK 312
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELES 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 313 SLDEVTEEAKARAEQINELVKEKTVKESELEGLmvennsiKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIV 392
Cdd:TIGR02168 331 KLDELAEELAELEEKLEELKEELESLEAELEEL-------EAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 393 ELSKLAGEQKHAVAQLRKDYNDQIKNgeklncnvsqlkdalaLVEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATG 472
Cdd:TIGR02168 404 RLEARLERLEDRRERLQQEIEELLKK----------------LEEAELKELQAELEELEEELEELQEELERLEEALEELR 467
|
330 340
....*....|....*....|....*....
gi 15240907 473 KELEKIKAERGRLIKEKKELENRSESLRN 501
Cdd:TIGR02168 468 EELEEAEQALDAAERELAQLQARLDSLER 496
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
310-591 |
2.12e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.37 E-value: 2.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 310 LEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEmamvqfsDKEKLVEQLLREKNELVQRVVNQEA 389
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIE-------ELQKELYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 390 EIVELSKlagEQKHAVAQLRKDYNDQIKNGEKLNcnvsQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEKTNE 469
Cdd:TIGR02168 310 RLANLER---QLEELEAQLEELESKLDELAEELA----ELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 470 A-------TGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRAT-----GVLKTELESAGTNAKQSLTM 537
Cdd:TIGR02168 383 TlrskvaqLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKElqaelEELEEELEELQEELERLEEA 462
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 15240907 538 LKSVSSLVCGIENKKDEKKRgkGMDSYSVQLEAIKKAFKNKESMVEEMKKELAK 591
Cdd:TIGR02168 463 LEELREELEEAEQALDAAER--ELAQLQARLDSLERLQENLEGFSEGVKALLKN 514
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
137-508 |
3.95e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.60 E-value: 3.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 137 KEKSDRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVRLEMREVSLGEEVGRLKCEN 216
Cdd:TIGR02168 677 REIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 217 GRLVKERKKREEVIERGNRERSELVESLEEKVREIDVLKREIEgvvkekmevemvrrDQREMIVELEKKLGDMNEIVESL 296
Cdd:TIGR02168 757 TELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK--------------ALREALDELRAELTLLNEEAANL 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 297 TKEREGLRGQVVGLEKsldevteeakaraeQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLRE 376
Cdd:TIGR02168 823 RERLESLERRIAATER--------------RLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEA 888
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 377 KNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALAlveverdnagkalDEEKRNMVA 456
Cdd:TIGR02168 889 LALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS-------------EEYSLTLEE 955
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 15240907 457 LKEKVVALEKTNEATGKELEKIKAERGRL-------IKEKKELENRSESLRNEKAILQK 508
Cdd:TIGR02168 956 AEALENKIEDDEEEARRRLKRLENKIKELgpvnlaaIEEYEELKERYDFLTAQKEDLTE 1014
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
228-446 |
9.50e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 9.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 228 EVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQV 307
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 308 VGLEKSLDEVTEEA--KARAEQINELVKEKTVKESELEGLMVE--NNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQR 383
Cdd:COG4942 100 EAQKEELAELLRALyrLGRQPPLALLLSPEDFLDAVRRLQYLKylAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15240907 384 VVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEVERDNAGKA 446
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
310-540 |
1.27e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.94 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 310 LEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEA 389
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 390 EIVELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEKTNE 469
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15240907 470 ATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELESAGTNAKQSLTMLKS 540
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
131-506 |
1.57e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.56 E-value: 1.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 131 EVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRVCDErdlvksgFDLQSEEMNLLKESVVRLEMREVSLGEEVG 210
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELE-------LEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 211 RLKCENGRLVKERKKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMN 290
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 291 EIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAmvqfsdkEKLV 370
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL-------LELL 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 371 EQLLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYND-QIKNGEKLNCNVSQLKDALALVEVERDNAGKALDE 449
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALA 545
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 15240907 450 EKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAIL 506
Cdd:COG1196 546 AALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVD 602
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
131-602 |
3.25e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.53 E-value: 3.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 131 EVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRvcderdlvksgfdlQSEEMNLLKESVVRLEMREVSLGEEVG 210
Cdd:PRK03918 190 NIEELIKEKEKELEEVLREINEISSELPELREELEKLEK--------------EVKELEELKEEIEELEKELESLEGSKR 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 211 RLKCENGRLVKERKKREEVIERgNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGD-- 288
Cdd:PRK03918 256 KLEEKIRELEERIEELKKEIEE-LEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEle 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 289 -MNEIVESLTKEREGLRGQVVGLEKSLdEVTEEAKARAEQINELVKEKTVKESEleglmvennSIKKEIEMAMVQFSDKE 367
Cdd:PRK03918 335 eKEERLEELKKKLKELEKRLEELEERH-ELYEEAKAKKEELERLKKRLTGLTPE---------KLEKELEELEKAKEEIE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 368 KLVEQLLREKNELVQRVVNQEAEIVELSKLAGE--------QKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEVE 439
Cdd:PRK03918 405 EEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgrelTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 440 RDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAE----RGRLIKEKKELEN------RSESLRNEKAILQKD 509
Cdd:PRK03918 485 LEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEyeklKEKLIKLKGEIKSlkkeleKLEELKKKLAELEKK 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 510 IVELKRATGVLKTELESAGtnakqsltmLKSVSSLVCGIENKKDEKKRGKGMDSYSVQLEAIKKAFKNKESMVEEMKKEL 589
Cdd:PRK03918 565 LDELEEELAELLKELEELG---------FESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEEL 635
|
490
....*....|...
gi 15240907 590 AKMKHSVEDAHKK 602
Cdd:PRK03918 636 AETEKRLEELRKE 648
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
143-557 |
5.17e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 5.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 143 ETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVRLEmrevSLGEEVGRLKCENGRLVKE 222
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE----TLEAEIEDLRETIAETERE 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 223 RKKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREG 302
Cdd:PRK02224 274 REELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADD 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 303 LRGQVVGLEKSLDEVTEEAKARAEQINElvkektvKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQ 382
Cdd:PRK02224 354 LEERAEELREEAAELESELEEAREAVED-------RREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 383 RVVNQEAEIVELSKLAGEQKHAVAQLR-----------------KDYNDQIkngEKLNCNVSQLKDALALVEvERDNAGK 445
Cdd:PRK02224 427 REAELEATLRTARERVEEAEALLEAGKcpecgqpvegsphvetiEEDRERV---EELEAELEDLEEEVEEVE-ERLERAE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 446 ALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELe 525
Cdd:PRK02224 503 DLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKL- 581
|
410 420 430
....*....|....*....|....*....|..
gi 15240907 526 sagTNAKQSLTMLKSVSSLVCGIENKKDEKKR 557
Cdd:PRK02224 582 ---AELKERIESLERIRTLLAAIADAEDEIER 610
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
186-483 |
6.46e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 6.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 186 EEMNLLKESVVRLEMREVSLGEEVGRLKCENGRLVKERKKREEVIERgnrERSELVESLEEKVREIDVLKREIEGVVKEK 265
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREY---EGYELLKEKEALERQKEAIERQLASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 266 MEVEMVRRDQREMIVELEKKLGDMNEIVESLTKER--------EGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTV 337
Cdd:TIGR02169 254 EKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEqlrvkekiGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 338 KESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLRE-----------KNELVQRVVNQEAEIVELSKLAGEQKHAVA 406
Cdd:TIGR02169 334 LLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAEleevdkefaetRDELKDYREKLEKLKREINELKRELDRLQE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 407 QLRK------DYNDQIKNGE----KLNCNVSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELE 476
Cdd:TIGR02169 414 ELQRlseelaDLNAAIAGIEakinELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELA 493
|
....*..
gi 15240907 477 KIKAERG 483
Cdd:TIGR02169 494 EAEAQAR 500
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
318-534 |
8.36e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 8.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 318 TEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKL 397
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 398 AGEQKHAVA-QLRKDYNDQIKNGEKL---NCNVSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGK 473
Cdd:COG4942 99 LEAQKEELAeLLRALYRLGRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15240907 474 ELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELESAGTNAKQS 534
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
96-422 |
1.74e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 1.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 96 LREELCGSSDENFMLKIEMDLLMGFV---EGRVKEMGVEVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRVCD 172
Cdd:TIGR02169 672 EPAELQRLRERLEGLKRELSSLQSELrriENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 173 ERDLVKSGFDLQSEEMNLLKESVVRLEMREVSLGEEVGRLKCENgrLVKERKKREEVIERGNRERSELVESLEEKVREID 252
Cdd:TIGR02169 752 EIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPE--IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 253 VLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEV----------TEEAK 322
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELeaqlrelerkIEELE 909
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 323 ARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNEL-----VQRVVNQEAEIVELSKL 397
Cdd:TIGR02169 910 AQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIralepVNMLAIQEYEEVLKRLD 989
|
330 340
....*....|....*....|....*.
gi 15240907 398 AGEQKHAVAQL-RKDYNDQIKNGEKL 422
Cdd:TIGR02169 990 ELKEKRAKLEEeRKAILERIEEYEKK 1015
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
9-593 |
1.99e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.30 E-value: 1.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 9 NSNGASNEQQQIQNQSVPVTSQKSTKLSRESSMEDHDSSEEKFQNLKSLNAILLKQTMEKRQQIESLFQAKDSLEIELVR 88
Cdd:PTZ00121 1055 NHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEAR 1134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 89 SGKEktllreelcgssdenfMLKIEmdllmgfvEGRVKEMGVEVDWLFKEKSDRETEIrdlKREANGLIRKLESEREEFS 168
Cdd:PTZ00121 1135 KAED----------------ARKAE--------EARKAEDAKRVEIARKAEDARKAEE---ARKAEDAKKAEAARKAEEV 1187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 169 RVCDErdlVKSGFDLQSEEMNLLKESVVRLEmrEVSLGEEVGRLkcENGRLVKERKKREEVIERGNRERSELVESLEEKV 248
Cdd:PTZ00121 1188 RKAEE---LRKAEDARKAEAARKAEEERKAE--EARKAEDAKKA--EAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEA 1260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 249 REIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQvvGLEKSLDEVTEEAKARAEQI 328
Cdd:PTZ00121 1261 RMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAD--EAKKKAEEAKKKADAAKKKA 1338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 329 NELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQlLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQL 408
Cdd:PTZ00121 1339 EEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADA-AKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAK 1417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 409 RKDYNDQIKNGEKLNCNVSQLKDAlalvEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKE 488
Cdd:PTZ00121 1418 KKADEAKKKAEEKKKADEAKKKAE----EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE 1493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 489 ---------KKELENRSESLRNEKAILQKDIVELKRATGVLKTElESAGTNAKQSLTMLKSVSSLVCGIENKKDEKKRGK 559
Cdd:PTZ00121 1494 eakkkadeaKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD-EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKA 1572
|
570 580 590
....*....|....*....|....*....|....*.
gi 15240907 560 GMDSYSV--QLEAIKKAFKNKESMVEEMKKELAKMK 593
Cdd:PTZ00121 1573 EEDKNMAlrKAEEAKKAEEARIEEVMKLYEEEKKMK 1608
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
234-514 |
4.02e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 234 NRERSELVESLEEKVREIDVLKRE-------IEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQ 306
Cdd:TIGR04523 355 ESENSEKQRELEEKQNEIEKLKKEnqsykqeIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKET 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 307 VVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVN 386
Cdd:TIGR04523 435 IIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKD 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 387 QEAEIVE-------LSKLAGEQKHAVAQLRKDYN--DQIKNGEKL-------NCNVSQLKDALALVEVERDNAGKALDEE 450
Cdd:TIGR04523 515 LTKKISSlkekiekLESEKKEKESKISDLEDELNkdDFELKKENLekeidekNKEIEELKQTQKSLKKKQEEKQELIDQK 594
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15240907 451 KRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELK 514
Cdd:TIGR04523 595 EKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
275-517 |
6.99e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 6.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 275 QREMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKK 354
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 355 EIEmamvqfsDKEKLVEQLLREknelVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKNgeklncNVSQLKDALA 434
Cdd:COG4942 98 ELE-------AQKEELAELLRA----LYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARRE------QAEELRADLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 435 LVEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELK 514
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
...
gi 15240907 515 RAT 517
Cdd:COG4942 241 ERT 243
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
242-463 |
8.55e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 8.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 242 ESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEA 321
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 322 KARAEQINELVKE--KTVKESELEGLMVENNSIKKEIEMAMVQ--FSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKL 397
Cdd:COG4942 100 EAQKEELAELLRAlyRLGRQPPLALLLSPEDFLDAVRRLQYLKylAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15240907 398 AGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVA 463
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
144-343 |
1.06e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 144 TEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVRLEMREVSLGEEVGRLKCENGRLVKER 223
Cdd:TIGR02169 294 EKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAEL 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 224 KKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGL 303
Cdd:TIGR02169 374 EEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ 453
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 15240907 304 RGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELE 343
Cdd:TIGR02169 454 EWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELA 493
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
234-499 |
1.66e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 48.00 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 234 NRERSELVESL-EEKVREIDVLKREIEGVVKekmevemvrRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVgleK 312
Cdd:PRK05771 15 KSYKDEVLEALhELGVVHIEDLKEELSNERL---------RKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSV---K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 313 SLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEmamvQFSDKEKLVEQLLREKNeLVQRVVNQEAEIV 392
Cdd:PRK05771 83 SLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLE----PWGNFDLDLSLLLGFKY-VSVFVGTVPEDKL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 393 ELSKLAGEQKHAVAqLRKDYNdqikngeklncnvsqlKDALALVeVERDNAGKALDEEKRN---MVALKEKVVALEKTNE 469
Cdd:PRK05771 158 EELKLESDVENVEY-ISTDKG----------------YVYVVVV-VLKELSDEVEEELKKLgfeRLELEEEGTPSELIRE 219
|
250 260 270
....*....|....*....|....*....|
gi 15240907 470 ATgKELEKIKAERGRLIKEKKELENRSESL 499
Cdd:PRK05771 220 IK-EELEEIEKERESLLEELKELAKKYLEE 248
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
137-461 |
2.63e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.37 E-value: 2.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 137 KEKSDRETEIRDLKREANG--LIRKLESEREEFSRVCDERDlvksgfDLQSEemnlLKESVVRLEMREVSLGEEVGRLKC 214
Cdd:TIGR02169 207 REKAERYQALLKEKREYEGyeLLKEKEALERQKEAIERQLA------SLEEE----LEKLTEEISELEKRLEEIEQLLEE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 215 ENGRLvkeRKKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMN---- 290
Cdd:TIGR02169 277 LNKKI---KDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERkrrd 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 291 ---EIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKE 367
Cdd:TIGR02169 354 kltEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIE 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 368 KLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNdqikngeKLNCNVSQLKDALALVEVERDNAGKAL 447
Cdd:TIGR02169 434 AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYD-------RVEKELSKLQRELAEAEAQARASEERV 506
|
330
....*....|....
gi 15240907 448 DEEKRNMVALKEKV 461
Cdd:TIGR02169 507 RGGRAVEEVLKASI 520
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
122-494 |
3.43e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.98 E-value: 3.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 122 EGRVKEMGVEVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVR---- 197
Cdd:PRK03918 316 LSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKelee 395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 198 LEMREVSLGEEVGRLKCENGRLVKERKKREEVIERGN----------------------RERSELVESLEEKVREIDVLK 255
Cdd:PRK03918 396 LEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcgrelteehrkellEEYTAELKRIEKELKEIEEKE 475
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 256 REIEgvvKEKMEVEMVRRDQREMIV---------ELEKKLGDMN-EIVESLTKEREGLRGQVVGLEKSLDEVTEEAkara 325
Cdd:PRK03918 476 RKLR---KELRELEKVLKKESELIKlkelaeqlkELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIKSLKKEL---- 548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 326 EQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQKHAV 405
Cdd:PRK03918 549 EKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL 628
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 406 AQLRKDYNDQIKNGEKLNCNVSQLKDALAlvEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRL 485
Cdd:PRK03918 629 DKAFEELAETEKRLEELRKELEELEKKYS--EEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER 706
|
....*....
gi 15240907 486 IKEKKELEN 494
Cdd:PRK03918 707 EKAKKELEK 715
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
310-527 |
4.19e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 310 LEKSLDEVTEEAKARAEQINELVKEKtvkESELEglmvennsikkEIEMAMVQFSDKEKLVeQLLREKNELVQRVVNQEA 389
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPEL---RKELE-----------EAEAALEEFRQKNGLV-DLSEEAKLLLQQLSELES 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 390 EIVELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCN--VSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEK- 466
Cdd:COG3206 227 QLAEARAELAEAEARLAALRAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAq 306
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15240907 467 TNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRatgvLKTELESA 527
Cdd:COG3206 307 LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRR----LEREVEVA 363
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
16-602 |
4.99e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 16 EQQQIQNQSVPVTSQKSTKLSRESSMEDH-DSSEEKFQNLKSLNAILLKQTMEKRQQIESLFQAKDSLEIELVRSGKEKT 94
Cdd:TIGR02168 254 ELEELTAELQELEEKLEELRLEVSELEEEiEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 95 LLREELCGSSDENFMLKIEMDLLmgfvegrvkemgvevdwlfkekSDRETEIRDLKREANGLIRKLESEREEFSRvcdER 174
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESL----------------------EAELEELEAELEELESRLEELEEQLETLRS---KV 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 175 DLVKSGFDLQSEEMNLLKESVVRLEMREVSLGEEVGRLKCENGRlvKERKKREEVIERGNRERSELVESLEEKVREIDVL 254
Cdd:TIGR02168 389 AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELKELQAELEELEEELEELQEELERLEEALEEL 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 255 KREIEGVVKE--KMEVEMVRRDQR-EMIVELEKKLGDMNEIVESLTKEREGLRGQV----------VGLEKSLDE----- 316
Cdd:TIGR02168 467 REELEEAEQAldAAERELAQLQARlDSLERLQENLEGFSEGVKALLKNQSGLSGILgvlselisvdEGYEAAIEAalggr 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 317 ----VTEEAKARAEQINELVKEKTVKESELE-------GLMVENNSIKKEIEMAMVQFSDKEKLVEQL------------ 373
Cdd:TIGR02168 547 lqavVVENLNAAKKAIAFLKQNELGRVTFLPldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLrkalsyllggvl 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 374 ----------LREKNELVQRVVNQEAEIV-----------ELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDA 432
Cdd:TIGR02168 627 vvddldnaleLAKKLRPGYRIVTLDGDLVrpggvitggsaKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 433 LALVEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVE 512
Cdd:TIGR02168 707 LEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEE 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 513 LKRATGVLKTEL---ESAGTNAKQSLTMLK----SVSSLVCGIENKKDEKKRgkgmdsysvQLEAIKKAFKNKESMVEEM 585
Cdd:TIGR02168 787 LEAQIEQLKEELkalREALDELRAELTLLNeeaaNLRERLESLERRIAATER---------RLEDLEEQIEELSEDIESL 857
|
650
....*....|....*..
gi 15240907 586 KKELAKMKHSVEDAHKK 602
Cdd:TIGR02168 858 AAEIEELEELIEELESE 874
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
212-503 |
5.05e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 212 LKCENGRLVKERKKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMvrRDQREMIVELEKKLGDMNE 291
Cdd:TIGR04523 258 LKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSEL--KNQEKKLEEIQNQISQNNK 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 292 IVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVE 371
Cdd:TIGR04523 336 IISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIK 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 372 QLLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEVERDNAGKALDEEK 451
Cdd:TIGR04523 416 KLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKE 495
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 15240907 452 RNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEK 503
Cdd:TIGR04523 496 KELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDEL 547
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
339-534 |
5.80e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 5.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 339 ESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQI-- 416
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAra 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 417 --KNGEKLNC--------NVSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLI 486
Cdd:COG3883 95 lyRSGGSVSYldvllgseSFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 15240907 487 KEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELESAGTNAKQS 534
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAA 222
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
80-593 |
5.89e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.26 E-value: 5.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 80 DSLEIELVRSGKEKTLLREELCGSSDENFMLKIEMDLLMGFVEGRVKEMGVEVDW---LFKEKSDRETEIRDLKREANGl 156
Cdd:pfam15921 345 EELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQnkrLWDRDTGNSITIDHLRRELDD- 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 157 iRKLESEREEfsrvcderDLVKSgfdLQSEEMNLLKESVVRLEMREVSLgEEVGRLKCENG-------RLVKERKKREEV 229
Cdd:pfam15921 424 -RNMEVQRLE--------ALLKA---MKSECQGQMERQMAAIQGKNESL-EKVSSLTAQLEstkemlrKVVEELTAKKMT 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 230 IERGNRERSELVESLEEKVREIDVLKREIEGVvkekmevemvrRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVG 309
Cdd:pfam15921 491 LESSERTVSDLTASLQEKERAIEATNAEITKL-----------RSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAE 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 310 leksLDEVTEEAKARAEQINELVKEKTVKESeleGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEA 389
Cdd:pfam15921 560 ----KDKVIEILRQQIENMTQLVGQHGRTAG---AMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLEL 632
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 390 EIVELSKLAGEQKHAVAQLRKDyNDQIKNgEKLNCNvSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEKTNE 469
Cdd:pfam15921 633 EKVKLVNAGSERLRAVKDIKQE-RDQLLN-EVKTSR-NELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE 709
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 470 ATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRATGVLKTE---LESAGTNAKQSLTMLKSVSSLVC 546
Cdd:pfam15921 710 QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEkhfLKEEKNKLSQELSTVATEKNKMA 789
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 15240907 547 G-IENKKDEKKRGK-GMDSYSVQLEAIKKAFKNKESMVEEMKKELAKMK 593
Cdd:pfam15921 790 GeLEVLRSQERRLKeKVANMEVALDKASLQFAECQDIIQRQEQESVRLK 838
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
187-604 |
7.74e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 7.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 187 EMNLLKESVVRLEMREVSLGEEVGRLKCENGRLVKERKKREEVIERGNRERSEL---VESLEEKVREIDVLKREIEGVVK 263
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLekeVKELEELKEEIEELEKELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 264 EKMEVEMVRRDQREMIVELEKKLGDMNEIVESLtkereglrgqvvgleKSLDEVTEEAKARAEQINELVKEKTVKESELE 343
Cdd:PRK03918 253 SKRKLEEKIRELEERIEELKKEIEELEEKVKEL---------------KELKEKAEEYIKLSEFYEEYLDELREIEKRLS 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 344 GLMVENNSIKKEIEmamvQFSDKEKLVEQLLREKNELVQRVvnqeAEIVELSKLAGEQKHAVAQLRK-DYNDQIKNGEKL 422
Cdd:PRK03918 318 RLEEEINGIEERIK----ELEEKEERLEELKKKLKELEKRL----EELEERHELYEEAKAKKEELERlKKRLTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 423 NCNVSQLKDALALVEVERDNAGKALDEEKRNMVALKEKVVALEK------------TNEATGKELEKIKAERGRLIKEKK 490
Cdd:PRK03918 390 EKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKakgkcpvcgrelTEEHRKELLEEYTAELKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 491 ELENRSESLRNEKAILQKDIVELKRATGVLKTelesagtnAKQSLTMLKSVSSLvcGIENKKDEKKRGKGMDSYSVQLEA 570
Cdd:PRK03918 470 EIEEKERKLRKELRELEKVLKKESELIKLKEL--------AEQLKELEEKLKKY--NLEELEKKAEEYEKLKEKLIKLKG 539
|
410 420 430
....*....|....*....|....*....|....
gi 15240907 571 IKKAFKNKESMVEEMKKELAKMKHSVEDAHKKKS 604
Cdd:PRK03918 540 EIKSLKKELEKLEELKKKLAELEKKLDELEEELA 573
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
242-396 |
2.30e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 44.30 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 242 ESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQ-REMIVELEKKLGDMNEI----------VESLTKEREGLRGQVVGL 310
Cdd:COG0542 411 EELDELERRLEQLEIEKEALKKEQDEASFERLAElRDELAELEEELEALKARweaekelieeIQELKEELEQRYGKIPEL 490
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 311 EKSLDEVTEEAKARAEQINELVKEKTVKE--SELEGLMVENnsikkeiemaMVQfSDKEKlveqLLREKNELVQRVVNQE 388
Cdd:COG0542 491 EKELAELEEELAELAPLLREEVTEEDIAEvvSRWTGIPVGK----------LLE-GEREK----LLNLEEELHERVIGQD 555
|
....*...
gi 15240907 389 AEIVELSK 396
Cdd:COG0542 556 EAVEAVAD 563
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
121-325 |
2.80e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 121 VEGRVKEMGVEVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRVcdERDLVKSGfdLQSEEMNLLK-ESVVRLE 199
Cdd:COG4942 60 LERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL--LRALYRLG--RQPPLALLLSpEDFLDAV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 200 MREVSLGeevgrlkcengRLVKERKKREEVIERGNRERSELVESLEEKVREIDVLKREIEgvvKEKMEVEMVRRDQREMI 279
Cdd:COG4942 136 RRLQYLK-----------YLAPARREQAEELRADLAELAALRAELEAERAELEALLAELE---EERAALEALKAERQKLL 201
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 15240907 280 VELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARA 325
Cdd:COG4942 202 ARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
2-354 |
2.96e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.95 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 2 AKKKVSRNSNGASNEQQQIQNQSVPVTSQKSTKLSRESSMEDHDSSEEKFQNLKSLNAILLKQTMEK-------RQQIES 74
Cdd:pfam15921 494 SERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKdkvieilRQQIEN 573
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 75 LFQ-------AKDSLEIELVRSGKEKTLLREELcgssDENFMLKIEMDLLMGFVEGRVKEMGVEVDWLFKEKSDRETEIR 147
Cdd:pfam15921 574 MTQlvgqhgrTAGAMQVEKAQLEKEINDRRLEL----QEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVK 649
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 148 DLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESV-VRLEMREVSLGEEVGRLKCENGRLVKERKKR 226
Cdd:pfam15921 650 DIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLkMQLKSAQSELEQTRNTLKSMEGSDGHAMKVA 729
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 227 EEVIERGNRERSElVESLEEKVREIDvlkreiEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEI---VESLTKEREGL 303
Cdd:pfam15921 730 MGMQKQITAKRGQ-IDALQSKIQFLE------EAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMageLEVLRSQERRL 802
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 15240907 304 RGQVVGLEKSLDEVT------EEAKARAEQINELVK-EKTVKESELEGLMVENNSIKK 354
Cdd:pfam15921 803 KEKVANMEVALDKASlqfaecQDIIQRQEQESVRLKlQHTLDVKELQGPGYTSNSSMK 860
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
136-345 |
3.04e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 136 FKEKSDRETEIRDLKREANGL--IRKLESEREEFSRVCDERDLVKSGFDLQ--SEEMNLLKESVVRLEmrevslgEEVGR 211
Cdd:COG4913 234 FDDLERAHEALEDAREQIELLepIRELAERYAAARERLAELEYLRAALRLWfaQRRLELLEAELEELR-------AELAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 212 LKCENGRLVKERKKREEVIERGNRERselvesLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLgdmNE 291
Cdd:COG4913 307 LEAELERLEARLDALREELDELEAQI------RGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPL---PA 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 15240907 292 IVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGL 345
Cdd:COG4913 378 SAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
283-533 |
3.52e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 3.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 283 EKKLGDMNE-------IVESLTKEREGLRGQVVGLEKSLdEVTEEAKARaeQINELVKEKTVKESELEGLMVENNSIKKE 355
Cdd:COG1196 178 ERKLEATEEnlerledILGELERQLEPLERQAEKAERYR-ELKEELKEL--EAELLLLKLRELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 356 IEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKlageqkhAVAQLRKDYNDQIKNGEKLNCNVSQLKDALAL 435
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA-------ELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 436 VEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKR 515
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
250
....*....|....*...
gi 15240907 516 ATGVLKTELESAGTNAKQ 533
Cdd:COG1196 408 AEEALLERLERLEEELEE 425
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
137-601 |
7.05e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.82 E-value: 7.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 137 KEKSDRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVRLEMREVSLGEEVGRlKCEN 216
Cdd:PTZ00121 1377 KKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKK-KAEE 1455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 217 GRLVKERKKREEviergNRERSELVESLEEKVREIDVLKREIEgvvKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESL 296
Cdd:PTZ00121 1456 AKKAEEAKKKAE-----EAKKADEAKKKAEEAKKADEAKKKAE---EAKKKADEAKKAAEAKKKADEAKKAEEAKKADEA 1527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 297 TKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVK--EKTVKESELEGLMVENNSIKKEIEMAMVQfsDKEKLVEQLL 374
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKkaEEAKKAEEDKNMALRKAEEAKKAEEARIE--EVMKLYEEEK 1605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 375 REKNELVQRVVNQEAEIVELSKlAGEQKHAVAQLRKDYNDQIKNGEklncnvsQLKDALALVEVERDNAGKALDEEKRnm 454
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKK-AEEEKKKVEQLKKKEAEEKKKAE-------ELKKAEEENKIKAAEEAKKAEEDKK-- 1675
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 455 valkekvvaleKTNEATGKELEKIKAERGrlIKEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELESAGTNAKQS 534
Cdd:PTZ00121 1676 -----------KAEEAKKAEEDEKKAAEA--LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED 1742
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15240907 535 LTMLKsvsslvcgiENKKDEKKRGKGMDSYSVQLEAIKKAFKNKESMVEE-MKKELAKMKHSVEDAHK 601
Cdd:PTZ00121 1743 KKKAE---------EAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEeLDEEDEKRRMEVDKKIK 1801
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
67-602 |
8.14e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.82 E-value: 8.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 67 EKRQQIESLFQAKDSLEIELVRSGKEKTLLREELCGSSDENFMLKIEmdllmGFVEGRVKEMGVEVDWLFKEKSDRETEI 146
Cdd:PTZ00121 1209 EEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIR-----KFEEARMAHFARRQAAIKAEEARKADEL 1283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 147 R--DLKREANGL-----IRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVRLEMREVSLGEEvgRLKCENGRL 219
Cdd:PTZ00121 1284 KkaEEKKKADEAkkaeeKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEA--EAAADEAEA 1361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 220 VKERKKREEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMvRRDQREMIVELEKKLGDMNEIVESLTKE 299
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKK-AAAAKKKADEAKKKAEEKKKADEAKKKA 1440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 300 REGLRGQVVGLEKSLDEVTEEAKARAEQIN--ELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVE-QLLRE 376
Cdd:PTZ00121 1441 EEAKKADEAKKKAEEAKKAEEAKKKAEEAKkaDEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEaKKAEE 1520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 377 KNELVQRVVNQEAEIVELSKLAGEQKHAvaqlrkdynDQIKNGEKLNCNVSQLKDALALVEVERDNAGKALDEEKRNMVA 456
Cdd:PTZ00121 1521 AKKADEAKKAEEAKKADEAKKAEEKKKA---------DELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE 1591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 457 LKEKVVALEKTNEATGKELEKIKAERGRLIKEkkELENRSESLRNEKAILQKDIVELKRATGVLKTELES---AGTNAKQ 533
Cdd:PTZ00121 1592 ARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE--ELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENkikAAEEAKK 1669
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15240907 534 SLTMLKSVSSLVCGIENKKDEKKRGKGMDSYSVQLEAIKKAFKNKESMVEEMKKELAKMKHSVEDAHKK 602
Cdd:PTZ00121 1670 AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKE 1738
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
122-500 |
1.01e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.33 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 122 EGRVKEMGVEVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVRLemr 201
Cdd:PRK02224 355 EERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAEL--- 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 202 EVSLGEEVGRLKcENGRLVKERKKRE---EViergnrERSELVESLEEKVREIDVLKREIEgvvkekmevemvrrDQREM 278
Cdd:PRK02224 432 EATLRTARERVE-EAEALLEAGKCPEcgqPV------EGSPHVETIEEDRERVEELEAELE--------------DLEEE 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 279 IVELEKKLGDMNEIVEsLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEM 358
Cdd:PRK02224 491 VEEVEERLERAEDLVE-AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEE 569
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 359 AMVQFSDKEKLVEQlLREKNELVQRVVNQEAEIVELSKLAGEQKHAVAQLrKDYNDQIKngEKL---NCNVSQLKDALAL 435
Cdd:PRK02224 570 AREEVAELNSKLAE-LKERIESLERIRTLLAAIADAEDEIERLREKREAL-AELNDERR--ERLaekRERKRELEAEFDE 645
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 436 VEVE-----RDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLikekKELENRSESLR 500
Cdd:PRK02224 646 ARIEearedKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERR----EALENRVEALE 711
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
67-504 |
1.07e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.33 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 67 EKRQQIESLFQAKDSLEIELVRSGKEKTLLREELcgssdenfmlkiemdllmgfvegrvkemgvevdwlfkekSDRETEI 146
Cdd:PRK02224 248 ERREELETLEAEIEDLRETIAETEREREELAEEV---------------------------------------RDLRERL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 147 RDLKREANGLIRKLESEREEFSRVCDERDlvksgfDLQSEemnllkESVVRLEMREVSLgeEVGRLKCENGRLVKERKKR 226
Cdd:PRK02224 289 EELEEERDDLLAEAGLDDADAEAVEARRE------ELEDR------DEELRDRLEECRV--AAQAHNEEAESLREDADDL 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 227 EEVIERGNRERSELVESLEEKVREIDVLKREIEgvvkekmEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQ 306
Cdd:PRK02224 355 EERAEELREEAAELESELEEAREAVEDRREEIE-------ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRER 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 307 VVGLE---KSLDEVTEEAKA------------------RAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAmVQFSD 365
Cdd:PRK02224 428 EAELEatlRTARERVEEAEAlleagkcpecgqpvegspHVETIEEDRERVEELEAELEDLEEEVEEVEERLERA-EDLVE 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 366 KEKLVEQLLREKNELVQRVVNQEAEIVE-------LSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVEV 438
Cdd:PRK02224 507 AEDRIERLEERREDLEELIAERRETIEEkreraeeLRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKE 586
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15240907 439 ERDNAGK------ALDEEKRNMVALKEKVVALEKTNEATGKELEKiKAERGRLIKEKKElENRSESLRNEKA 504
Cdd:PRK02224 587 RIESLERirtllaAIADAEDEIERLREKREALAELNDERRERLAE-KRERKRELEAEFD-EARIEEAREDKE 656
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
320-536 |
1.87e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 320 EAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAG 399
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 400 EQKHAVAQLR-----KDYNDQIKNGEKLNCNVSQLKDALALVEVERdnagKALDEEKRNMVALKEKVVALEKTNEATGKE 474
Cdd:COG3883 97 RSGGSVSYLDvllgsESFSDFLDRLSALSKIADADADLLEELKADK----AELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15240907 475 LEKIKAERGRLI----KEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELESAGTNAKQSLT 536
Cdd:COG3883 173 LEAQQAEQEALLaqlsAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
280-527 |
2.09e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.21 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 280 VELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELvkektvkESELEGLMVENNSIKKEIEMA 359
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEI-------EKEIEQLEQEEEKLKERLEEL 742
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 360 MVQFSDKEKLVEQLLREKNELVQRVVNQEAEIVELSKLAGEQK-----HAVAQLRKDYNDQIKNGEKLNCNVSQLKDALA 434
Cdd:TIGR02169 743 EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEarlshSRIPEIQAELSKLEEEVSRIEARLREIEQKLN 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 435 LVEVERDNAGKALDEEKRNMVALKEKVVALEKTNEAtgkelekikaergrLIKEKKELENRSESLRNEKAILQKDIVELK 514
Cdd:TIGR02169 823 RLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEN--------------LNGKKEELEEELEELEAALRDLESRLGDLK 888
|
250
....*....|...
gi 15240907 515 RATGVLKTELESA 527
Cdd:TIGR02169 889 KERDELEAQLREL 901
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
227-357 |
2.40e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 227 EEVIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDM--NEIVESLTKEREGLR 304
Cdd:COG1579 23 EHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnNKEYEALQKEIESLK 102
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 15240907 305 GQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIE 357
Cdd:COG1579 103 RRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELE 155
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
236-521 |
3.35e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.38 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 236 ERSELVESLEE-------------KVREidvLKREIEGVVKEKMEVEMVRRDQREMIVELEKK----LGDMNEIVESLTK 298
Cdd:PHA02562 151 ARRKLVEDLLDisvlsemdklnkdKIRE---LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKngenIARKQNKYDELVE 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 299 EREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEglmvennSIKKEIEM---------AMVQFSDKEKL 369
Cdd:PHA02562 228 EAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIE-------QFQKVIKMyekggvcptCTQQISEGPDR 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 370 VEQLLREKNELVQRVVNQEAEIVELSKLAGEqkhavaqlrkdYNDQIKNGEKLNCNVSQlkdalalveverdnagkalde 449
Cdd:PHA02562 301 ITKIKDKLKELQHSLEKLDTAIDELEEIMDE-----------FNEQSKKLLELKNKIST--------------------- 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15240907 450 EKRNMVALKEKVVALEKtneatgkELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRATGVLK 521
Cdd:PHA02562 349 NKQSLITLVDKAKKVKA-------AIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLK 413
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
138-343 |
3.48e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 40.59 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 138 EKSDRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKESVVR--LEMREVSLGEEVGRLKCE 215
Cdd:pfam12128 676 RKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKaaIAARRSGAKAELKALETW 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 216 NGRLVKERKKREEVIERGNRERSELVESLEE------KVREIDVLKREIEGVVKEKM--EVEMVRRDQREMIVELEKKLG 287
Cdd:pfam12128 756 YKRDLASLGVDPDVIAKLKREIRTLERKIERiavrrqEVLRYFDWYQETWLQRRPRLatQLSNIERAISELQQQLARLIA 835
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 15240907 288 DMNEIVESLTKEREGLRGQVVGLEKSLDEVteeaKARAEQINELVKEKTVKESELE 343
Cdd:pfam12128 836 DTKLRRAKLEMERKASEKQQVRLSENLRGL----RCEMSKLATLKEDANSEQAQGS 887
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
229-488 |
3.70e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.26 E-value: 3.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 229 VIERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVV 308
Cdd:pfam07888 25 VVPRAELLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYK 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 309 GLEKSLDEVTEEAKARAEQINElvKEKTVKESELEGLMVENNSIKKEIEMAMVQfSDKEKLVEQLLREKNELVQRVVNQE 388
Cdd:pfam07888 105 ELSASSEELSEEKDALLAQRAA--HEARIRELEEDIKTLTQRVLERETELERMK-ERAKKAGAQRKEEEAERKQLQAKLQ 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 389 AEIVELSKLAGEQKhavaQLRKDYNDQIKNGEKLNCNVSQLKDALALVEvERDNAGKALDEEKRnmvALKEKVVALEKTN 468
Cdd:pfam07888 182 QTEEELRSLSKEFQ----ELRNSLAQRDTQVLQLQDTITTLTQKLTTAH-RKEAENEALLEELR---SLQERLNASERKV 253
|
250 260
....*....|....*....|
gi 15240907 469 EATGKELEKIKAERGRLIKE 488
Cdd:pfam07888 254 EGLGEELSSMAAQRDRTQAE 273
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
160-406 |
3.73e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.30 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 160 LESEREEFSRVCDERDLV--------KSGFDLQ--SEEMNLLKESVVRLEmrevSLGEEVGRLKCENGRLVKerKKREEV 229
Cdd:PRK05771 14 LKSYKDEVLEALHELGVVhiedlkeeLSNERLRklRSLLTKLSEALDKLR----SYLPKLNPLREEKKKVSV--KSLEEL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 230 IERGNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKK-----LGDMNEIVESLTKEREGLR 304
Cdd:PRK05771 88 IKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGNFDLDLSLLLGFKyvsvfVGTVPEDKLEELKLESDVE 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 305 GQ-------------VVGLEKSLDEVTEEAKARAEQINELVKEKTVKEsELEGLMVENNSIKKEIEMAMVQFSDKEKLVE 371
Cdd:PRK05771 168 NVeyistdkgyvyvvVVVLKELSDEVEEELKKLGFERLELEEEGTPSE-LIREIKEELEEIEKERESLLEELKELAKKYL 246
|
250 260 270
....*....|....*....|....*....|....*
gi 15240907 372 QLLREKNELVQrvvnQEAEIVELSKLAGEQKHAVA 406
Cdd:PRK05771 247 EELLALYEYLE----IELERAEALSKFLKTDKTFA 277
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
276-515 |
3.74e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 276 REMIVElEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLdEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKE 355
Cdd:COG4913 214 REYMLE-EPDTFEAADALVEHFDDLERAHEALEDAREQI-ELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLE 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 356 iemamvqfsdkekLVEQLLREKNELVQRvvnQEAEIVELSKLAGEQKHAVAQLRKDYNDQikNGEKLNcnvsQLKDALAL 435
Cdd:COG4913 292 -------------LLEAELEELRAELAR---LEAELERLEARLDALREELDELEAQIRGN--GGDRLE----QLEREIER 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 436 VEVERDNAGKALDEEKRNMVALKEKVV----ALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIV 511
Cdd:COG4913 350 LERELEERERRRARLEALLAALGLPLPasaeEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
....
gi 15240907 512 ELKR 515
Cdd:COG4913 430 SLER 433
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
142-402 |
3.91e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 40.45 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 142 RETEIRDLKREANGLIRKLESErEEFSRVCDERDLVKsgFDLQSEEMNLLKESVVRLEMREVSLGEEVGRLKCENGRLVK 221
Cdd:COG5022 804 SLLGSRKEYRSYLACIIKLQKT-IKREKKLRETEEVE--FSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELA 880
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 222 ERKKREEVIErgNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVemvrrdQREMIVELEKKLGDMnEIVESLTKERE 301
Cdd:COG5022 881 ERQLQELKID--VKSISSLKLVNLELESEIIELKKSLSSDLIENLEF------KTELIARLKKLLNNI-DLEEGPSIEYV 951
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 302 GLR--GQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEmamvQFSDKEKLVEQLLREKNE 379
Cdd:COG5022 952 KLPelNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYG----ALQESTKQLKELPVEVAE 1027
|
250 260
....*....|....*....|....*
gi 15240907 380 L--VQRVVNQEAEivELSKLAGEQK 402
Cdd:COG5022 1028 LqsASKIISSEST--ELSILKPLQK 1050
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
264-508 |
4.33e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.11 E-value: 4.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 264 EKMEVEMVRRDQREMIVELEKKlgdmNEIVESLTKEREGLRGQ----------VVGLEKSLDEVTEEAKARA-EQI-NEL 331
Cdd:pfam17380 294 EKMEQERLRQEKEEKAREVERR----RKLEEAEKARQAEMDRQaaiyaeqermAMERERELERIRQEERKRElERIrQEE 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 332 VKEKTVKESELEGLMVE----NNSIKKEIEMAMVQFSDKEKLVEQLLREKNELVQ-RVVNQEAEIVELSKLAGEQKHAVA 406
Cdd:pfam17380 370 IAMEISRMRELERLQMErqqkNERVRQELEAARKVKILEEERQRKIQQQKVEMEQiRAEQEEARQREVRRLEEERAREME 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 407 QLRKDYNDQIKNGEKLNCNVSQLKDalALVEVERDNAGKALDEEKRNMVALKE----KVVALEKTNEAtgKELEKIKAER 482
Cdd:pfam17380 450 RVRLEEQERQQQVERLRQQEEERKR--KKLELEKEKRDRKRAEEQRRKILEKEleerKQAMIEEERKR--KLLEKEMEER 525
|
250 260
....*....|....*....|....*.
gi 15240907 483 GRLIKEKKELENRSESLRNEKAILQK 508
Cdd:pfam17380 526 QKAIYEEERRREAEEERRKQQEMEER 551
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
235-604 |
4.88e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 40.03 E-value: 4.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 235 RERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQremIVELEKKLG-----DMNEIVESLTKEREGLRGQVVG 309
Cdd:PTZ00108 995 KRKEYLLGKLERELARLSNKVRFIKHVINGELVITNAKKKD---LVKELKKLGyvrfkDIIKKKSEKITAEEEEGAEEDD 1071
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 310 LEKSLDEVTEEAKAR--------------AEQINELVKEKTVKESELEGLmvENNSIKkeiEMAMvqfSDKEKLVEQLlr 375
Cdd:PTZ00108 1072 EADDEDDEEELGAAVsydyllsmpiwsltKEKVEKLNAELEKKEKELEKL--KNTTPK---DMWL---EDLDKFEEAL-- 1141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 376 eknelvqrvvnQEAEIVELSKLAGEQKHAVAQLRKdyndqikngEKLNCNVSQLKDALALVEVERDNAGKALDEEKRNMV 455
Cdd:PTZ00108 1142 -----------EEQEEVEEKEIAKEQRLKSKTKGK---------ASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRV 1201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 456 ALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELESAGTNAKQSL 535
Cdd:PTZ00108 1202 DSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAV 1281
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15240907 536 TMLKSVSSLVCGIENKKDEKKRGKGMDSYSVQLEAIKKAFKNKESMvEEMKKELAKMKHSVEDAHKKKS 604
Cdd:PTZ00108 1282 QYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKS-EKKTARKKKSKTRVKQASASQS 1349
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
283-504 |
5.26e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.43 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 283 EKKLGDMNEIVESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQINELVKEKTVKESELEGL---MVENNSIKKEIEMA 359
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAeaeIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15240907 360 MVQFSDKEKLVEQLLREKN--ELVQRVVNqeaeiveLSKLAGEQKHAVAQLRKDYNDQIKNGEKLNCNVSQLKDALALVE 437
Cdd:COG3883 95 LYRSGGSVSYLDVLLGSESfsDFLDRLSA-------LSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELE 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15240907 438 VERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKA 504
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAA 234
|
|
| |
