|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 super family |
cl33662 |
Resistant to P. syringae 6; Provisional |
14-1022 |
2.92e-109 |
|
Resistant to P. syringae 6; Provisional
The actual alignment was detected with superfamily member PLN03210:
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 372.67 E-value: 2.92e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 14 EEVRYSFVSHLSKALQRKGV---NDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVS---LDKLVKVLDCQKNKDQVV 87
Cdd:PLN03210 22 EDVRITFLSHFLKELDRKLIiafKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSswcLNELLEIVRCKEELGQLV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 88 VPVLYGVRSS-------------------ETE-----WLSALDSKGFSSVHHSRKECSDSQLVKETVRDVYEKLF----- 138
Cdd:PLN03210 102 IPVFYGLDPShvrkqtgdfgeafektcqnKTEdekiqWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNltpsn 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 139 -YMERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFI---------EDYTKA-IQEK 207
Cdd:PLN03210 182 dFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIdrafisksmEIYSSAnPDDY 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 208 GVYCLLEEQFLKENAGASGT-VTKLSLLRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVFRLCR 286
Cdd:PLN03210 262 NMKLHLQRAFLSEILDKKDIkIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAHG 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 287 VNQIYEVQGLNEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLALNLYGRELMGKKRPPEMEIaFLKLKECPPA 366
Cdd:PLN03210 342 IDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDM-LPRLRNGLDG 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 367 IFVDAIKSSYDTLNDR-EKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQ 445
Cdd:PLN03210 421 KIEKTLRVSYDGLNNKkDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKE 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 446 IINRETRQTKRRSRLWEPCSIKYLLEDkeqneNEEQKTTFERAQVPEEIEGMFLDTSnlsfdikhvAFDNMLNLRLFKIY 525
Cdd:PLN03210 501 IVRAQSNEPGEREFLVDAKDICDVLED-----NTGTKKVLGITLDIDEIDELHIHEN---------AFKGMRNLLFLKFY 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 526 SSN-PEVHHVNNFLKGSLSSLPNVLRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQ 604
Cdd:PLN03210 567 TKKwDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKN 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 605 LVDIDDLLKAQNLEVVDLQGCTRLQSFPATGQLL------------HLRVV------------NLSGCTEIKSFPEIPPN 660
Cdd:PLN03210 647 LKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLnkledldmsrceNLEILptginlkslyrlNLSGCSRLKSFPDISTN 726
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 661 IETLNLQGTGV----SNLEQSDL-----------------KPLTSLMK-------------------ISTSYQNPGKLSC 700
Cdd:PLN03210 727 ISWLDLDETAIeefpSNLRLENLdelilcemkseklwervQPLTPLMTmlspsltrlflsdipslveLPSSIQNLHKLEH 806
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 701 LELNDCSRLRSLPNMVNLELLKALDLSGCSELETIQGFPRNLKELYLVGTAVRQVPQLPQS---LEFFNAHGCVSLKSIR 777
Cdd:PLN03210 807 LEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEVPWWIEKfsnLSFLDMNGCNNLQRVS 886
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 778 LDFKKLPVHYT--FSNCFDLSPQVVNDfLVQAMANV---IAKHIPRERHVTGFSQKTVQRSSRDSQQELNKTLAFSFC-A 851
Cdd:PLN03210 887 LNISKLKHLETvdFSDCGALTEASWNG-SPSEVAMAtdnIHSKLPSTVCINFINCFNLDQEALLQQQSIFKQLILSGEeV 965
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 852 PSH-ANQNSKLDLqpgsSSMTRLDPSWRNTLVGFAMLVQVAFSEGYCDDTDFGISCVCKWKNKEGhSHRREINLHCWALG 930
Cdd:PLN03210 966 PSYfTHRTTGASL----TNIPLLHISPCQPFFRFRACAVVDSESFFIISVSFDIQVCCRFIDRLG-NHFDSPYQPHVFSV 1040
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 931 KavERDHTFVFFDVNMRPDTDEGNDPDIWADLVVFEFFPVNKqrkplNDSCTVTRCGVRLITAVNcNTSIENISPVLSLD 1010
Cdd:PLN03210 1041 T--KKGSHLVIFDCCFPLNEDNAPLAELNYDHVDIQFRLTNK-----NSQLKLKGCGIRLSEDDS-SLNNTLPNVEEADD 1112
|
1130
....*....|..
gi 30694677 1011 PMEVSGNEDEEV 1022
Cdd:PLN03210 1113 DNPVNGSEHWED 1124
|
|
| WRKY |
smart00774 |
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a ... |
1153-1209 |
9.15e-32 |
|
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
:
Pssm-ID: 214815 Cd Length: 59 Bit Score: 118.36 E-value: 9.15e-32
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 30694677 1153 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNH 1209
Cdd:smart00774 3 DGYQWRKYGQKVIKGSPYPRSYYRCTYTQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59
|
|
| PLN03210 super family |
cl33662 |
Resistant to P. syringae 6; Provisional |
1020-1104 |
3.15e-11 |
|
Resistant to P. syringae 6; Provisional
The actual alignment was detected with superfamily member PLN03210:
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 68.36 E-value: 3.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 1020 EEVLRVRYAGLQEIY-KALFLYIAGLFNDEDVGLVAPLIANIiDMDVSYGLKVLAYRSLIRVSSNgEIVMHYLLRQMGKE 1098
Cdd:PLN03210 423 EKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANS-DLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQEMGKE 500
|
....*.
gi 30694677 1099 ILHTES 1104
Cdd:PLN03210 501 IVRAQS 506
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
14-1022 |
2.92e-109 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 372.67 E-value: 2.92e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 14 EEVRYSFVSHLSKALQRKGV---NDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVS---LDKLVKVLDCQKNKDQVV 87
Cdd:PLN03210 22 EDVRITFLSHFLKELDRKLIiafKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSswcLNELLEIVRCKEELGQLV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 88 VPVLYGVRSS-------------------ETE-----WLSALDSKGFSSVHHSRKECSDSQLVKETVRDVYEKLF----- 138
Cdd:PLN03210 102 IPVFYGLDPShvrkqtgdfgeafektcqnKTEdekiqWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNltpsn 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 139 -YMERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFI---------EDYTKA-IQEK 207
Cdd:PLN03210 182 dFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIdrafisksmEIYSSAnPDDY 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 208 GVYCLLEEQFLKENAGASGT-VTKLSLLRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVFRLCR 286
Cdd:PLN03210 262 NMKLHLQRAFLSEILDKKDIkIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAHG 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 287 VNQIYEVQGLNEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLALNLYGRELMGKKRPPEMEIaFLKLKECPPA 366
Cdd:PLN03210 342 IDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDM-LPRLRNGLDG 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 367 IFVDAIKSSYDTLNDR-EKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQ 445
Cdd:PLN03210 421 KIEKTLRVSYDGLNNKkDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKE 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 446 IINRETRQTKRRSRLWEPCSIKYLLEDkeqneNEEQKTTFERAQVPEEIEGMFLDTSnlsfdikhvAFDNMLNLRLFKIY 525
Cdd:PLN03210 501 IVRAQSNEPGEREFLVDAKDICDVLED-----NTGTKKVLGITLDIDEIDELHIHEN---------AFKGMRNLLFLKFY 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 526 SSN-PEVHHVNNFLKGSLSSLPNVLRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQ 604
Cdd:PLN03210 567 TKKwDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKN 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 605 LVDIDDLLKAQNLEVVDLQGCTRLQSFPATGQLL------------HLRVV------------NLSGCTEIKSFPEIPPN 660
Cdd:PLN03210 647 LKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLnkledldmsrceNLEILptginlkslyrlNLSGCSRLKSFPDISTN 726
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 661 IETLNLQGTGV----SNLEQSDL-----------------KPLTSLMK-------------------ISTSYQNPGKLSC 700
Cdd:PLN03210 727 ISWLDLDETAIeefpSNLRLENLdelilcemkseklwervQPLTPLMTmlspsltrlflsdipslveLPSSIQNLHKLEH 806
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 701 LELNDCSRLRSLPNMVNLELLKALDLSGCSELETIQGFPRNLKELYLVGTAVRQVPQLPQS---LEFFNAHGCVSLKSIR 777
Cdd:PLN03210 807 LEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEVPWWIEKfsnLSFLDMNGCNNLQRVS 886
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 778 LDFKKLPVHYT--FSNCFDLSPQVVNDfLVQAMANV---IAKHIPRERHVTGFSQKTVQRSSRDSQQELNKTLAFSFC-A 851
Cdd:PLN03210 887 LNISKLKHLETvdFSDCGALTEASWNG-SPSEVAMAtdnIHSKLPSTVCINFINCFNLDQEALLQQQSIFKQLILSGEeV 965
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 852 PSH-ANQNSKLDLqpgsSSMTRLDPSWRNTLVGFAMLVQVAFSEGYCDDTDFGISCVCKWKNKEGhSHRREINLHCWALG 930
Cdd:PLN03210 966 PSYfTHRTTGASL----TNIPLLHISPCQPFFRFRACAVVDSESFFIISVSFDIQVCCRFIDRLG-NHFDSPYQPHVFSV 1040
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 931 KavERDHTFVFFDVNMRPDTDEGNDPDIWADLVVFEFFPVNKqrkplNDSCTVTRCGVRLITAVNcNTSIENISPVLSLD 1010
Cdd:PLN03210 1041 T--KKGSHLVIFDCCFPLNEDNAPLAELNYDHVDIQFRLTNK-----NSQLKLKGCGIRLSEDDS-SLNNTLPNVEEADD 1112
|
1130
....*....|..
gi 30694677 1011 PMEVSGNEDEEV 1022
Cdd:PLN03210 1113 DNPVNGSEHWED 1124
|
|
| WRKY |
smart00774 |
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a ... |
1153-1209 |
9.15e-32 |
|
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Pssm-ID: 214815 Cd Length: 59 Bit Score: 118.36 E-value: 9.15e-32
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 30694677 1153 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNH 1209
Cdd:smart00774 3 DGYQWRKYGQKVIKGSPYPRSYYRCTYTQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59
|
|
| WRKY |
pfam03106 |
WRKY DNA -binding domain; |
1153-1209 |
5.18e-31 |
|
WRKY DNA -binding domain;
Pssm-ID: 460808 Cd Length: 57 Bit Score: 116.04 E-value: 5.18e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 30694677 1153 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNH 1209
Cdd:pfam03106 1 DGYSWRKYGQKQIKGSKFPRSYYRCTHKPGCPAKKQVQRSPDDPSIFEVTYEGEHTH 57
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
7-137 |
1.69e-14 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 72.78 E-value: 1.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 7 IVYISCIEE-VRYSFVSHLSKALQRKGVNdVFIDSDD-----SLSNESQSMVERARVSVMILPGNRTVS---LDKLVKVL 77
Cdd:pfam01582 2 DVFLSFRGSdTREWFVSHLLKELKQKGIK-LFIDDRDlepgeAIAPELLSAIEKSRRSVVVLSPNYASSgwcLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 78 DCQKNKDQVVVPVLYGVRSSETEWLSALDSKGF----------------------SSVHHSRKECSDSQLVKETVRDVYE 135
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFkkhkkvlteekvlkwrgalnevANIWHSKSVSDESKFWKKIAYDISN 160
|
..
gi 30694677 136 KL 137
Cdd:pfam01582 161 KL 162
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
535-752 |
1.05e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 71.89 E-value: 1.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 535 NNFLKGSLSSLPNVLRLLHWENYPLQFLPQnfdpihLVEINMPYSQLKKLWGGTKDLEMLKTIRLcHSQQLVDIDDLLKA 614
Cdd:COG4886 85 LLLGLTDLGDLTNLTELDLSGNEELSNLTN------LESLDLSGNQLTDLPEELANLTNLKELDL-SNNQLTDLPEPLGN 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 615 -QNLEVVDLQGCtRLQSFPAT-GQLLHLRVVNLSGcTEIKSFPEI---PPNIETLNLQGTGVSNLEQSdLKPLTSLMKis 689
Cdd:COG4886 158 lTNLKSLDLSNN-QLTDLPEElGNLTNLKELDLSN-NQITDLPEPlgnLTNLEELDLSGNQLTDLPEP-LANLTNLET-- 232
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30694677 690 tsyqnpgklscLELNDCsRLRSLPNMVNLELLKALDLSGC--SELETIQGFPrNLKELYLVGTAV 752
Cdd:COG4886 233 -----------LDLSNN-QLTDLPELGNLTNLEELDLSNNqlTDLPPLANLT-NLKTLDLSNNQL 284
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1020-1104 |
3.15e-11 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 68.36 E-value: 3.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 1020 EEVLRVRYAGLQEIY-KALFLYIAGLFNDEDVGLVAPLIANIiDMDVSYGLKVLAYRSLIRVSSNgEIVMHYLLRQMGKE 1098
Cdd:PLN03210 423 EKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANS-DLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQEMGKE 500
|
....*.
gi 30694677 1099 ILHTES 1104
Cdd:PLN03210 501 IVRAQS 506
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
8-94 |
7.19e-05 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 44.24 E-value: 7.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 8 VYIS--CIEEVRYSFVSHLSKALQRKGVNdVFIDSDDSLSNESQSM---VERARVSVMIL-PG--NRTVSLDKLVKVLDC 79
Cdd:smart00255 4 VFISysGKEDVRNEFLSHLLEKLRGYGLC-VFIDDFEPGGGDLEEIdeaIEKSRIAIVVLsPNyaESEWCLDELVAALEN 82
|
90
....*....|....*.
gi 30694677 80 QKNKDQ-VVVPVLYGV 94
Cdd:smart00255 83 ALEEGGlRVIPIFYEV 98
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
14-1022 |
2.92e-109 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 372.67 E-value: 2.92e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 14 EEVRYSFVSHLSKALQRKGV---NDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVS---LDKLVKVLDCQKNKDQVV 87
Cdd:PLN03210 22 EDVRITFLSHFLKELDRKLIiafKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSswcLNELLEIVRCKEELGQLV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 88 VPVLYGVRSS-------------------ETE-----WLSALDSKGFSSVHHSRKECSDSQLVKETVRDVYEKLF----- 138
Cdd:PLN03210 102 IPVFYGLDPShvrkqtgdfgeafektcqnKTEdekiqWKQALTDVANILGYHSQNWPNEAKMIEEIANDVLGKLNltpsn 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 139 -YMERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFI---------EDYTKA-IQEK 207
Cdd:PLN03210 182 dFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIdrafisksmEIYSSAnPDDY 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 208 GVYCLLEEQFLKENAGASGT-VTKLSLLRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVFRLCR 286
Cdd:PLN03210 262 NMKLHLQRAFLSEILDKKDIkIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAHG 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 287 VNQIYEVQGLNEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLALNLYGRELMGKKRPPEMEIaFLKLKECPPA 366
Cdd:PLN03210 342 IDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDM-LPRLRNGLDG 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 367 IFVDAIKSSYDTLNDR-EKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQ 445
Cdd:PLN03210 421 KIEKTLRVSYDGLNNKkDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKE 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 446 IINRETRQTKRRSRLWEPCSIKYLLEDkeqneNEEQKTTFERAQVPEEIEGMFLDTSnlsfdikhvAFDNMLNLRLFKIY 525
Cdd:PLN03210 501 IVRAQSNEPGEREFLVDAKDICDVLED-----NTGTKKVLGITLDIDEIDELHIHEN---------AFKGMRNLLFLKFY 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 526 SSN-PEVHHVNNFLKGSLSSLPNVLRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQ 604
Cdd:PLN03210 567 TKKwDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKN 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 605 LVDIDDLLKAQNLEVVDLQGCTRLQSFPATGQLL------------HLRVV------------NLSGCTEIKSFPEIPPN 660
Cdd:PLN03210 647 LKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLnkledldmsrceNLEILptginlkslyrlNLSGCSRLKSFPDISTN 726
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 661 IETLNLQGTGV----SNLEQSDL-----------------KPLTSLMK-------------------ISTSYQNPGKLSC 700
Cdd:PLN03210 727 ISWLDLDETAIeefpSNLRLENLdelilcemkseklwervQPLTPLMTmlspsltrlflsdipslveLPSSIQNLHKLEH 806
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 701 LELNDCSRLRSLPNMVNLELLKALDLSGCSELETIQGFPRNLKELYLVGTAVRQVPQLPQS---LEFFNAHGCVSLKSIR 777
Cdd:PLN03210 807 LEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEVPWWIEKfsnLSFLDMNGCNNLQRVS 886
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 778 LDFKKLPVHYT--FSNCFDLSPQVVNDfLVQAMANV---IAKHIPRERHVTGFSQKTVQRSSRDSQQELNKTLAFSFC-A 851
Cdd:PLN03210 887 LNISKLKHLETvdFSDCGALTEASWNG-SPSEVAMAtdnIHSKLPSTVCINFINCFNLDQEALLQQQSIFKQLILSGEeV 965
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 852 PSH-ANQNSKLDLqpgsSSMTRLDPSWRNTLVGFAMLVQVAFSEGYCDDTDFGISCVCKWKNKEGhSHRREINLHCWALG 930
Cdd:PLN03210 966 PSYfTHRTTGASL----TNIPLLHISPCQPFFRFRACAVVDSESFFIISVSFDIQVCCRFIDRLG-NHFDSPYQPHVFSV 1040
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 931 KavERDHTFVFFDVNMRPDTDEGNDPDIWADLVVFEFFPVNKqrkplNDSCTVTRCGVRLITAVNcNTSIENISPVLSLD 1010
Cdd:PLN03210 1041 T--KKGSHLVIFDCCFPLNEDNAPLAELNYDHVDIQFRLTNK-----NSQLKLKGCGIRLSEDDS-SLNNTLPNVEEADD 1112
|
1130
....*....|..
gi 30694677 1011 PMEVSGNEDEEV 1022
Cdd:PLN03210 1113 DNPVNGSEHWED 1124
|
|
| WRKY |
smart00774 |
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a ... |
1153-1209 |
9.15e-32 |
|
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Pssm-ID: 214815 Cd Length: 59 Bit Score: 118.36 E-value: 9.15e-32
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 30694677 1153 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNH 1209
Cdd:smart00774 3 DGYQWRKYGQKVIKGSPYPRSYYRCTYTQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59
|
|
| WRKY |
pfam03106 |
WRKY DNA -binding domain; |
1153-1209 |
5.18e-31 |
|
WRKY DNA -binding domain;
Pssm-ID: 460808 Cd Length: 57 Bit Score: 116.04 E-value: 5.18e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 30694677 1153 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNH 1209
Cdd:pfam03106 1 DGYSWRKYGQKQIKGSKFPRSYYRCTHKPGCPAKKQVQRSPDDPSIFEVTYEGEHTH 57
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
7-137 |
1.69e-14 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 72.78 E-value: 1.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 7 IVYISCIEE-VRYSFVSHLSKALQRKGVNdVFIDSDD-----SLSNESQSMVERARVSVMILPGNRTVS---LDKLVKVL 77
Cdd:pfam01582 2 DVFLSFRGSdTREWFVSHLLKELKQKGIK-LFIDDRDlepgeAIAPELLSAIEKSRRSVVVLSPNYASSgwcLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 78 DCQKNKDQVVVPVLYGVRSSETEWLSALDSKGF----------------------SSVHHSRKECSDSQLVKETVRDVYE 135
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFkkhkkvlteekvlkwrgalnevANIWHSKSVSDESKFWKKIAYDISN 160
|
..
gi 30694677 136 KL 137
Cdd:pfam01582 161 KL 162
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
152-379 |
7.74e-14 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 72.80 E-value: 7.74e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 152 IEKMINK--QPLDIRC----VGIWGMPGIGKTTLAKAVF---DQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEqFLKENA 222
Cdd:pfam00931 1 REDMVEKviGKLSEKDepgiVGIHGMGGVGKTTLAAQIFndfDEVEGHFDSVAWVVVSKTFTISTLQQTILQN-LGLSED 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 223 GAS--GTVTKLSLLRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVFRlcRVNQIY---EVQGLN 297
Cdd:pfam00931 80 DWDnkEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAG--RVGGPSdphEVELLE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 298 EKEALQLFSL---------CASIDDMAEqnlhevsmKVIKYANGHPLALNLYGRELMGKKRPPEMEIAFLKLkECPPAIF 368
Cdd:pfam00931 158 PDEAWELFENkvfpktlgeCELLEDVAK--------EIVEKCRGLPLALKVLGGLLSCKKTVEEWKHVYDVL-QSELKSN 228
|
250
....*....|.
gi 30694677 369 VDAIKSSYDTL 379
Cdd:pfam00931 229 SYSLNSVRSIL 239
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
535-752 |
1.05e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 71.89 E-value: 1.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 535 NNFLKGSLSSLPNVLRLLHWENYPLQFLPQnfdpihLVEINMPYSQLKKLWGGTKDLEMLKTIRLcHSQQLVDIDDLLKA 614
Cdd:COG4886 85 LLLGLTDLGDLTNLTELDLSGNEELSNLTN------LESLDLSGNQLTDLPEELANLTNLKELDL-SNNQLTDLPEPLGN 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 615 -QNLEVVDLQGCtRLQSFPAT-GQLLHLRVVNLSGcTEIKSFPEI---PPNIETLNLQGTGVSNLEQSdLKPLTSLMKis 689
Cdd:COG4886 158 lTNLKSLDLSNN-QLTDLPEElGNLTNLKELDLSN-NQITDLPEPlgnLTNLEELDLSGNQLTDLPEP-LANLTNLET-- 232
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30694677 690 tsyqnpgklscLELNDCsRLRSLPNMVNLELLKALDLSGC--SELETIQGFPrNLKELYLVGTAV 752
Cdd:COG4886 233 -----------LDLSNN-QLTDLPELGNLTNLEELDLSNNqlTDLPPLANLT-NLKTLDLSNNQL 284
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
535-769 |
5.55e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 69.58 E-value: 5.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 535 NNFLKGSLSSLPNVLRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRL--CHSQQLVDIDDLL 612
Cdd:COG4886 31 LLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLtnLTELDLSGNEELS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 613 KAQNLEVVDLQGcTRLQSFPAT-GQLLHLRVVNLSGcTEIKSFPE-IP--PNIETLNLQGTGVSNLEQSdLKPLTSLMK- 687
Cdd:COG4886 111 NLTNLESLDLSG-NQLTDLPEElANLTNLKELDLSN-NQLTDLPEpLGnlTNLKSLDLSNNQLTDLPEE-LGNLTNLKEl 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 688 ---------ISTSYQNPGKLSCLELNDCsRLRSLP-NMVNLELLKALDLSGC--SELETIQGFPrNLKELYLVGTAVRQV 755
Cdd:COG4886 188 dlsnnqitdLPEPLGNLTNLEELDLSGN-QLTDLPePLANLTNLETLDLSNNqlTDLPELGNLT-NLEELDLSNNQLTDL 265
|
250
....*....|....*.
gi 30694677 756 PQLPQ--SLEFFNAHG 769
Cdd:COG4886 266 PPLANltNLKTLDLSN 281
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1020-1104 |
3.15e-11 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 68.36 E-value: 3.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 1020 EEVLRVRYAGLQEIY-KALFLYIAGLFNDEDVGLVAPLIANIiDMDVSYGLKVLAYRSLIRVSSNgEIVMHYLLRQMGKE 1098
Cdd:PLN03210 423 EKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANS-DLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQEMGKE 500
|
....*.
gi 30694677 1099 ILHTES 1104
Cdd:PLN03210 501 IVRAQS 506
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
570-589 |
2.87e-06 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 44.64 E-value: 2.87e-06
|
| NACHT |
COG5635 |
Predicted NTPase, NACHT family domain [Signal transduction mechanisms]; |
28-300 |
1.43e-05 |
|
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
Pssm-ID: 444362 [Multi-domain] Cd Length: 935 Bit Score: 49.80 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 28 LQRKGVNDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVSLDKLVKVLDCQKNKDQVVVPVLYGVRSSETEWLSALDS 107
Cdd:COG5635 51 LLADLGALLALVSRSALSAAALLARALSALLLVLLLLESLLLLLLLLLLLAEALLALLELAALLKAVLLSLSGGSDLVLL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 108 KGFSSVHHSRKE-CSDSQLVKETVRDVYEKLFYMERIGIYSKLLEIEkminkqpLDIRCVGIWGMPGIGKTTLAKAVFDQ 186
Cdd:COG5635 131 LSESDLLLALLIlLLDADGLLVSLDDLYVPLNLLERIESLKRLELLE-------AKKKRLLILGEPGSGKTTLLRYLALE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 187 MSGEFDAHC-----FIE--DYTKaiqEKGVYCLLEEQFLKENAGASGTVTKLsllrdrLNNKRVLVVLD----------- 248
Cdd:COG5635 204 LAERYLDAEdpipiLIElrDLAE---EASLEDLLAEALEKRGGEPEDALERL------LRNGRLLLLLDgldevpdeadr 274
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 30694677 249 -DVRSPLvvESFLGGFdwfgPKSLIIITS----KDKSVFRLCRVnqiYEVQGLNEKE 300
Cdd:COG5635 275 dEVLNQL--RRFLERY----PKARVIITSrpegYDSSELEGFEV---LELAPLSDEQ 322
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
8-94 |
7.19e-05 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 44.24 E-value: 7.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 8 VYIS--CIEEVRYSFVSHLSKALQRKGVNdVFIDSDDSLSNESQSM---VERARVSVMIL-PG--NRTVSLDKLVKVLDC 79
Cdd:smart00255 4 VFISysGKEDVRNEFLSHLLEKLRGYGLC-VFIDDFEPGGGDLEEIdeaIEKSRIAIVVLsPNyaESEWCLDELVAALEN 82
|
90
....*....|....*.
gi 30694677 80 QKNKDQ-VVVPVLYGV 94
Cdd:smart00255 83 ALEEGGlRVIPIFYEV 98
|
|
| CDC6 |
COG1474 |
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]; |
168-250 |
7.20e-04 |
|
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair];
Pssm-ID: 441083 [Multi-domain] Cd Length: 389 Bit Score: 43.68 E-value: 7.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 168 IWGMPGIGKTTLAKAVFDQMSGEFDAH----------CFIEDYTKAIqekgVYCLLEEQFLKENAGASGTVTK--LSLLR 235
Cdd:COG1474 56 IYGPTGTGKTAVAKYVLEELEEEAEERgvdvrvvyvnCRQASTRYRV----LSRILEELGSGEDIPSTGLSTDelFDRLY 131
|
90
....*....|....*..
gi 30694677 236 DRLN--NKRVLVVLDDV 250
Cdd:COG1474 132 EALDerDGVLVVVLDEI 148
|
|
| AAA_16 |
pfam13191 |
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ... |
164-274 |
1.45e-03 |
|
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.
Pssm-ID: 433025 [Multi-domain] Cd Length: 167 Bit Score: 40.95 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30694677 164 RCVGIWGMPGIGKTTLAKAVFDQ--------MSGEFDAHCFIEDYTKAIQEKGVYCLLE--------EQFLKENAGASGT 227
Cdd:pfam13191 25 PSVLLTGEAGTGKTTLLRELLRAlerdggyfLRGKCDENLPYSPLLEALTREGLLRQLLdelessllEAWRAALLEALAP 104
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 30694677 228 VTKLSL-LRDRLNN--KRVLVVLDDVRSPLVVesFLGGFDWFGPKSLIII 274
Cdd:pfam13191 105 VPELPGdLAERLLDllLRLLDLLARGERPLVL--VLDDLQWADEASLQLL 152
|
|
| |
