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Conserved domains on  [gi|15238054|ref|NP_199539|]
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ADR1-like 3 [Arabidopsis thaliana]

Protein Classification

NB-LRR family disease resistance protein( domain architecture ID 11837295)

NB-LRR (nucleotide-binding-leucine rich repeat) family disease resistance protein guards the plant against pathogens via an indirect interaction with an avirulence protein contained in the plant, triggering a defense response that restricts the pathogen growth

CATH:  3.80.10.10
Gene Ontology:  GO:0006952|GO:0005515|GO:0000166
PubMed:  20483655|25825425|9545207|21459033|11751054|7583641|14747988
SCOP:  4003523

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
409-587 1.01e-18

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 88.84  E-value: 1.01e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 409 TSLTNLRSLWLERVHVPELSSSMIPLKNLHKLYLIickiNNSFDQTAIDIAQiFPKLTDITIDYCDdLAELPSTICGITS 488
Cdd:COG4886 110 SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLS----NNQLTDLPEPLGN-LTNLKSLDLSNNQ-LTDLPEELGNLTN 183

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 489 LNSISITNCpNIKELPKNISKLQALQLLRLYACpELKSLPVEICELPRLVYVDISHClSLSSLPEkIGNVRTLEKIDMRE 568
Cdd:COG4886 184 LKELDLSNN-QITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNN-QLTDLPE-LGNLTNLEELDLSN 259

                       170
                ....*....|....*....
gi 15238054 569 CSLSSIPSSAvSLTSLCYV 587
Cdd:COG4886 260 NQLTDLPPLA-NLTNLKTL 277
NB-ARC super family cl26397
NB-ARC domain;
6-212 1.01e-16

NB-ARC domain;


The actual alignment was detected with superfamily member pfam00931:

Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 80.12  E-value: 1.01e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054     6 NDEARIIGISGMIGSGKTILAKELARD-EEVRGHFaNRVLFLTVSQSPNLEEL-RSLIRDFLTgheAGFGTALPESVGHT 83
Cdd:pfam00931  15 KDEPGIVGIHGMGGVGKTTLAAQIFNDfDEVEGHF-DSVAWVVVSKTFTISTLqQTILQNLGL---SEDDWDNKEEGELA 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054    84 RK----------LVILDDVRTRESLDQLMFNIP----GTTTLVVSQSKLV-----DPRTTYDVELLNEHDATSLFCLSAF 144
Cdd:pfam00931  91 RKirralltkrfLLVLDDVWDEEDWDKIGIPLPdrenGCRVLLTTRSEEVagrvgGPSDPHEVELLEPDEAWELFENKVF 170

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   145 NQKSVPSGFSKSLVKQVVGESKGLPLSLKVLGASLNDRpETY--WAIAVERLSRgEPVDETHESKVFAQI 212
Cdd:pfam00931 171 PKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCK-KTVeeWKHVYDVLQS-ELKSNSYSLNSVRSI 238
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
409-587 1.01e-18

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 88.84  E-value: 1.01e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 409 TSLTNLRSLWLERVHVPELSSSMIPLKNLHKLYLIickiNNSFDQTAIDIAQiFPKLTDITIDYCDdLAELPSTICGITS 488
Cdd:COG4886 110 SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLS----NNQLTDLPEPLGN-LTNLKSLDLSNNQ-LTDLPEELGNLTN 183

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 489 LNSISITNCpNIKELPKNISKLQALQLLRLYACpELKSLPVEICELPRLVYVDISHClSLSSLPEkIGNVRTLEKIDMRE 568
Cdd:COG4886 184 LKELDLSNN-QITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNN-QLTDLPE-LGNLTNLEELDLSN 259

                       170
                ....*....|....*....
gi 15238054 569 CSLSSIPSSAvSLTSLCYV 587
Cdd:COG4886 260 NQLTDLPPLA-NLTNLKTL 277
NB-ARC pfam00931
NB-ARC domain;
6-212 1.01e-16

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 80.12  E-value: 1.01e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054     6 NDEARIIGISGMIGSGKTILAKELARD-EEVRGHFaNRVLFLTVSQSPNLEEL-RSLIRDFLTgheAGFGTALPESVGHT 83
Cdd:pfam00931  15 KDEPGIVGIHGMGGVGKTTLAAQIFNDfDEVEGHF-DSVAWVVVSKTFTISTLqQTILQNLGL---SEDDWDNKEEGELA 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054    84 RK----------LVILDDVRTRESLDQLMFNIP----GTTTLVVSQSKLV-----DPRTTYDVELLNEHDATSLFCLSAF 144
Cdd:pfam00931  91 RKirralltkrfLLVLDDVWDEEDWDKIGIPLPdrenGCRVLLTTRSEEVagrvgGPSDPHEVELLEPDEAWELFENKVF 170

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   145 NQKSVPSGFSKSLVKQVVGESKGLPLSLKVLGASLNDRpETY--WAIAVERLSRgEPVDETHESKVFAQI 212
Cdd:pfam00931 171 PKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCK-KTVeeWKHVYDVLQS-ELKSNSYSLNSVRSI 238
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 2-582 1.20e-15

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 81.07  E-value: 1.20e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054     2 LFNL-NDEARIIGISGMIGSGKTILAKELARDEEVRGH---FANRVlFLTVS----QSPNLEELR---SLIRDFLTG--- 67
Cdd:PLN03210  199 LLHLeSEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQssvFIDRA-FISKSmeiySSANPDDYNmklHLQRAFLSEild 277

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054    68 ------HEAGfgtALPESVGHTRKLVILDDVRTRESLDQLMFNIP----GTTTLVVSQSK--LVDPRT--TYDVELLNEH 133
Cdd:PLN03210  278 kkdikiYHLG---AMEERLKHRKVLIFIDDLDDQDVLDALAGQTQwfgsGSRIIVITKDKhfLRAHGIdhIYEVCLPSNE 354

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   134 DATSLFCLSAFNQKSVPSGFSKsLVKQVVGESKGLPLSLKVLGASLNDRPETYWAIAVERLSRGepvdetheskVFAQIE 213
Cdd:PLN03210  355 LALEMFCRSAFKKNSPPDGFME-LASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNG----------LDGKIE 423

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   214 ATL----ENL-DPKTKECFLDMGAFPEGKKIP----------VDVLINM--------------LVKIHDL---------- 254
Cdd:PLN03210  424 KTLrvsyDGLnNKKDKAIFRHIACLFNGEKVNdiklllansdLDVNIGLknlvdkslihvredIVEMHSLlqemgkeivr 503

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   255 ---EDAAAFDVLVDLanRNLLTLVKDPTfvamGTSYYDIFVTQHDVLRDVALH---------------LTNRGKVSRRDR 316
Cdd:PLN03210  504 aqsNEPGEREFLVDA--KDICDVLEDNT----GTKKVLGITLDIDEIDELHIHenafkgmrnllflkfYTKKWDQKKEVR 577

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   317 LLMPKRETMLPSE-----WER-------SNDEPYNarVVSIH-TGEMTEMDW---------FDMDFPKA----------- 363
Cdd:PLN03210  578 WHLPEGFDYLPPKlrllrWDKyplrcmpSNFRPEN--LVKLQmQGSKLEKLWdgvhsltglRNIDLRGSknlkeipdlsm 655

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   364 ----EVLIVNFSSDNYVLPPFIAKMGMLRVFVIinngTSPAHLHDFPIPTSL---------------------TNLRSLW 418
Cdd:PLN03210  656 atnlETLKLSDCSSLVELPSSIQYLNKLEDLDM----SRCENLEILPTGINLkslyrlnlsgcsrlksfpdisTNISWLD 731

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   419 LERVHVPELSSSMiPLKNLhkLYLIICKINNSFDQTAID-----IAQIFPKLTDITIDYCDDLAELPSTICGITSLNSIS 493
Cdd:PLN03210  732 LDETAIEEFPSNL-RLENL--DELILCEMKSEKLWERVQpltplMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLE 808

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   494 ITNCPNIKELPKNISkLQALQLLRLYACPELKSLP-------------VEICELP-------RLVYVDISHCLSLSSLPE 553
Cdd:PLN03210  809 IENCINLETLPTGIN-LESLESLDLSGCSRLRTFPdistnisdlnlsrTGIEEVPwwiekfsNLSFLDMNGCNNLQRVSL 887

                         730       740       750
                  ....*....|....*....|....*....|....*
gi 15238054   554 KIGNVRTLEKIDMREC------SLSSIPSSAVSLT 582
Cdd:PLN03210  888 NISKLKHLETVDFSDCgalteaSWNGSPSEVAMAT 922
COG3903 COG3903
Predicted ATPase [General function prediction only];
5-318 4.59e-05

Predicted ATPase [General function prediction only];


Pssm-ID: 443109 [Multi-domain]  Cd Length: 933  Bit Score: 46.55  E-value: 4.59e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   5 LNDEARIIGISGMIGSGKTILAKELARdeEVRGHFANRVLF-------------------LTVSQSPNlEELRSLIRDFL 65
Cdd:COG3903 172 LLSAARLVTLTGPGGVGKTRLALEVAH--RLADRFPDGVWFvdlagvtdpalvlaavaraLGVRDAPG-RDPAARLRAAL 248

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054  66 TGHEAgfgtalpesvghtrkLVILDDVR-----TRESLDQLMFNIPGTTTLVVSQSKLVDPR-TTYDVELL--------- 130
Cdd:COG3903 249 ADRRL---------------LLVLDNCEhvvdaAAALVRPLLPAAPGLRVLATSREPLGLPGeRVLPLPPLavpppgaea 313

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 131 NEHDATSLFCLSAfnqKSVPSGFS-----KSLVKQVVGESKGLPLSLKVLGASLNDRPetywaIA--VERL--------- 194
Cdd:COG3903 314 LASEAVALFVERA---GAARPGFAldaaeAAAVAEICRRLDGLPLAIELAAARLRTLS-----LAelAARLddrlrlltg 385

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 195 -SRGEPvdETHESkVFAQIEATLENLDPKTKECFLDMGAFPEGkkIPVDVLINMLVkihDLEDAAAFDVLVDLANRNLLT 273
Cdd:COG3903 386 gRRDAP--PRHRT-LRAALDWSYDLLSPAERRLLRRLSVFPGG--FTLEAAEAVCG---GDGPADVLDLLAALVDKSLLE 457

                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 15238054 274 LVKDPTfvamGTSYydifvTQHDVLRDVAL-HLTNRGKVSR-RDRLL 318
Cdd:COG3903 458 VEGGGG----GPRY-----RLLETVREYAAeRLAEAGERAAaRRRHA 495
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
409-587 1.01e-18

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 88.84  E-value: 1.01e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 409 TSLTNLRSLWLERVHVPELSSSMIPLKNLHKLYLIickiNNSFDQTAIDIAQiFPKLTDITIDYCDdLAELPSTICGITS 488
Cdd:COG4886 110 SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLS----NNQLTDLPEPLGN-LTNLKSLDLSNNQ-LTDLPEELGNLTN 183

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 489 LNSISITNCpNIKELPKNISKLQALQLLRLYACpELKSLPVEICELPRLVYVDISHClSLSSLPEkIGNVRTLEKIDMRE 568
Cdd:COG4886 184 LKELDLSNN-QITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNN-QLTDLPE-LGNLTNLEELDLSN 259

                       170
                ....*....|....*....
gi 15238054 569 CSLSSIPSSAvSLTSLCYV 587
Cdd:COG4886 260 NQLTDLPPLA-NLTNLKTL 277
NB-ARC pfam00931
NB-ARC domain;
6-212 1.01e-16

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 80.12  E-value: 1.01e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054     6 NDEARIIGISGMIGSGKTILAKELARD-EEVRGHFaNRVLFLTVSQSPNLEEL-RSLIRDFLTgheAGFGTALPESVGHT 83
Cdd:pfam00931  15 KDEPGIVGIHGMGGVGKTTLAAQIFNDfDEVEGHF-DSVAWVVVSKTFTISTLqQTILQNLGL---SEDDWDNKEEGELA 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054    84 RK----------LVILDDVRTRESLDQLMFNIP----GTTTLVVSQSKLV-----DPRTTYDVELLNEHDATSLFCLSAF 144
Cdd:pfam00931  91 RKirralltkrfLLVLDDVWDEEDWDKIGIPLPdrenGCRVLLTTRSEEVagrvgGPSDPHEVELLEPDEAWELFENKVF 170

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   145 NQKSVPSGFSKSLVKQVVGESKGLPLSLKVLGASLNDRpETY--WAIAVERLSRgEPVDETHESKVFAQI 212
Cdd:pfam00931 171 PKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCK-KTVeeWKHVYDVLQS-ELKSNSYSLNSVRSI 238
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
410-584 1.19e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 82.67  E-value: 1.19e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 410 SLTNLRSLWLErvHVPELSSsmipLKNLHKLYLIickiNNSFDQTAIDIAQiFPKLTDITIDYCDdLAELPSTICGITSL 489
Cdd:COG4886  94 DLTNLTELDLS--GNEELSN----LTNLESLDLS----GNQLTDLPEELAN-LTNLKELDLSNNQ-LTDLPEPLGNLTNL 161

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 490 NSISITNCpNIKELPKNISKLQALQLLRLYACPeLKSLPVEICELPRLVYVDISHClSLSSLPEKIGNVRTLEKIDMREC 569
Cdd:COG4886 162 KSLDLSNN-QLTDLPEELGNLTNLKELDLSNNQ-ITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNN 238

                       170
                ....*....|....*
gi 15238054 570 SLSSIPSSAvSLTSL 584
Cdd:COG4886 239 QLTDLPELG-NLTNL 252
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 2-582 1.20e-15

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 81.07  E-value: 1.20e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054     2 LFNL-NDEARIIGISGMIGSGKTILAKELARDEEVRGH---FANRVlFLTVS----QSPNLEELR---SLIRDFLTG--- 67
Cdd:PLN03210  199 LLHLeSEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQssvFIDRA-FISKSmeiySSANPDDYNmklHLQRAFLSEild 277

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054    68 ------HEAGfgtALPESVGHTRKLVILDDVRTRESLDQLMFNIP----GTTTLVVSQSK--LVDPRT--TYDVELLNEH 133
Cdd:PLN03210  278 kkdikiYHLG---AMEERLKHRKVLIFIDDLDDQDVLDALAGQTQwfgsGSRIIVITKDKhfLRAHGIdhIYEVCLPSNE 354

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   134 DATSLFCLSAFNQKSVPSGFSKsLVKQVVGESKGLPLSLKVLGASLNDRPETYWAIAVERLSRGepvdetheskVFAQIE 213
Cdd:PLN03210  355 LALEMFCRSAFKKNSPPDGFME-LASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNG----------LDGKIE 423

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   214 ATL----ENL-DPKTKECFLDMGAFPEGKKIP----------VDVLINM--------------LVKIHDL---------- 254
Cdd:PLN03210  424 KTLrvsyDGLnNKKDKAIFRHIACLFNGEKVNdiklllansdLDVNIGLknlvdkslihvredIVEMHSLlqemgkeivr 503

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   255 ---EDAAAFDVLVDLanRNLLTLVKDPTfvamGTSYYDIFVTQHDVLRDVALH---------------LTNRGKVSRRDR 316
Cdd:PLN03210  504 aqsNEPGEREFLVDA--KDICDVLEDNT----GTKKVLGITLDIDEIDELHIHenafkgmrnllflkfYTKKWDQKKEVR 577

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   317 LLMPKRETMLPSE-----WER-------SNDEPYNarVVSIH-TGEMTEMDW---------FDMDFPKA----------- 363
Cdd:PLN03210  578 WHLPEGFDYLPPKlrllrWDKyplrcmpSNFRPEN--LVKLQmQGSKLEKLWdgvhsltglRNIDLRGSknlkeipdlsm 655

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   364 ----EVLIVNFSSDNYVLPPFIAKMGMLRVFVIinngTSPAHLHDFPIPTSL---------------------TNLRSLW 418
Cdd:PLN03210  656 atnlETLKLSDCSSLVELPSSIQYLNKLEDLDM----SRCENLEILPTGINLkslyrlnlsgcsrlksfpdisTNISWLD 731

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   419 LERVHVPELSSSMiPLKNLhkLYLIICKINNSFDQTAID-----IAQIFPKLTDITIDYCDDLAELPSTICGITSLNSIS 493
Cdd:PLN03210  732 LDETAIEEFPSNL-RLENL--DELILCEMKSEKLWERVQpltplMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLE 808

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   494 ITNCPNIKELPKNISkLQALQLLRLYACPELKSLP-------------VEICELP-------RLVYVDISHCLSLSSLPE 553
Cdd:PLN03210  809 IENCINLETLPTGIN-LESLESLDLSGCSRLRTFPdistnisdlnlsrTGIEEVPwwiekfsNLSFLDMNGCNNLQRVSL 887

                         730       740       750
                  ....*....|....*....|....*....|....*
gi 15238054   554 KIGNVRTLEKIDMREC------SLSSIPSSAVSLT 582
Cdd:PLN03210  888 NISKLKHLETVDFSDCgalteaSWNGSPSEVAMAT 922
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
377-574 1.90e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 75.74  E-value: 1.90e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 377 LPPFIAKMGMLRVFVIINNgtspaHLHDFPIP-TSLTNLRSLWLERVHVPELSSSMIPLKNLHKLYLiickinnsfdqta 455
Cdd:COG4886 128 LPEELANLTNLKELDLSNN-----QLTDLPEPlGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDL------------- 189

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 456 idiaqifpkltditidYCDDLAELPSTICGITSLNSISITNCpNIKELPKNISKLQALQLLRLYACpELKSLPvEICELP 535
Cdd:COG4886 190 ----------------SNNQITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNN-QLTDLP-ELGNLT 250

                       170       180       190
                ....*....|....*....|....*....|....*....
gi 15238054 536 RLVYVDISHClSLSSLPEkIGNVRTLEKIDMRECSLSSI 574
Cdd:COG4886 251 NLEELDLSNN-QLTDLPP-LANLTNLKTLDLSNNQLTDL 287
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
405-584 1.99e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 63.03  E-value: 1.99e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 405 FPIPTSLTNLRSLWLERVHVPELSSSMIPLKNLHKLYLIICKINNSFDQTAIDIAQIFPKLTDITIDYCDDLAELPSTIC 484
Cdd:COG4886   3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 485 GITSLNSISITNCPNIKEL----PKNISKLQALQLLRLYACpELKSLPVEICELPRLVYVDISHClSLSSLPEKIGNVRT 560
Cdd:COG4886  83 SLLLLGLTDLGDLTNLTELdlsgNEELSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN-QLTDLPEPLGNLTN 160

                       170       180
                ....*....|....*....|....
gi 15238054 561 LEKIDMRECSLSSIPSSAVSLTSL 584
Cdd:COG4886 161 LKSLDLSNNQLTDLPEELGNLTNL 184
PRK15386 PRK15386
type III secretion effector GogB;
454-605 7.07e-06

type III secretion effector GogB;


Pssm-ID: 237954 [Multi-domain]  Cd Length: 426  Bit Score: 48.71  E-value: 7.07e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054  454 TAIDIAQI--FP-KLTDITIDYCDDLAELPSTIC-GITSLnsiSITNCPNIKELPKNISKLQalqlLRLYACPELKSLPV 529
Cdd:PRK15386  60 KDCDIESLpvLPnELTEITIENCNNLTTLPGSIPeGLEKL---TVCHCPEISGLPESVRSLE----IKGSATDSIKNVPN 132

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15238054  530 EICELPRLVYVDISHCLSLSSLPEKignvrtLEKIDMRECSLSSIPssaVSL-TSLCYVTCYREALWMWKEVEKAVP 605
Cdd:PRK15386 133 GLTSLSINSYNPENQARIDNLISPS------LKTLSLTGCSNIILP---EKLpESLQSITLHIEQKTTWNISFEGFP 200
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
426-591 1.69e-05

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 47.62  E-value: 1.69e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 426 ELSSSMIPLKNLHKLYLIICKINNSFDQTAIDIAQIFPKLTDITIDYCDDLAELPSTIC-GITSLNSISITNCPNIKELP 504
Cdd:COG4886  10 LKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLlSLLLLLLLSLLLLSLLLLGL 89

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 505 KNISKLQALQLLRLYACPELKslpveicELPRLVYVDISHClSLSSLPEKIGNVRTLEKIDMRECSLSSIPSSAVSLTSL 584
Cdd:COG4886  90 TDLGDLTNLTELDLSGNEELS-------NLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNL 161


                ....*..
gi 15238054 585 CYVTCYR 591
Cdd:COG4886 162 KSLDLSN 168
COG3903 COG3903
Predicted ATPase [General function prediction only];
5-318 4.59e-05

Predicted ATPase [General function prediction only];


Pssm-ID: 443109 [Multi-domain]  Cd Length: 933  Bit Score: 46.55  E-value: 4.59e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   5 LNDEARIIGISGMIGSGKTILAKELARdeEVRGHFANRVLF-------------------LTVSQSPNlEELRSLIRDFL 65
Cdd:COG3903 172 LLSAARLVTLTGPGGVGKTRLALEVAH--RLADRFPDGVWFvdlagvtdpalvlaavaraLGVRDAPG-RDPAARLRAAL 248

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054  66 TGHEAgfgtalpesvghtrkLVILDDVR-----TRESLDQLMFNIPGTTTLVVSQSKLVDPR-TTYDVELL--------- 130
Cdd:COG3903 249 ADRRL---------------LLVLDNCEhvvdaAAALVRPLLPAAPGLRVLATSREPLGLPGeRVLPLPPLavpppgaea 313

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 131 NEHDATSLFCLSAfnqKSVPSGFS-----KSLVKQVVGESKGLPLSLKVLGASLNDRPetywaIA--VERL--------- 194
Cdd:COG3903 314 LASEAVALFVERA---GAARPGFAldaaeAAAVAEICRRLDGLPLAIELAAARLRTLS-----LAelAARLddrlrlltg 385

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 195 -SRGEPvdETHESkVFAQIEATLENLDPKTKECFLDMGAFPEGkkIPVDVLINMLVkihDLEDAAAFDVLVDLANRNLLT 273
Cdd:COG3903 386 gRRDAP--PRHRT-LRAALDWSYDLLSPAERRLLRRLSVFPGG--FTLEAAEAVCG---GDGPADVLDLLAALVDKSLLE 457

                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 15238054 274 LVKDPTfvamGTSYydifvTQHDVLRDVAL-HLTNRGKVSR-RDRLL 318
Cdd:COG3903 458 VEGGGG----GPRY-----RLLETVREYAAeRLAEAGERAAaRRRHA 495
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
5-90 2.82e-03

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 40.94  E-value: 2.82e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054   5 LNDEARIIGISGMIGSGKTILAKELARDEEVRGHFANR--VLFLTVSQSPNLEELRSLIRDFLTGHEAGFGTALPESVGH 82
Cdd:COG5635 176 LEAKKKRLLILGEPGSGKTTLLRYLALELAERYLDAEDpiPILIELRDLAEEASLEDLLAEALEKRGGEPEDALERLLRN 255


                ....*...
gi 15238054  83 TRKLVILD 90
Cdd:COG5635 256 GRLLLLLD 263
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
372-516 8.27e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 39.15  E-value: 8.27e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15238054 372 SDNYV--LPPFIAKMGMLRVFVIINNgtspaHLHDFPIPTSLTNLRSLWLERVHVPELSSSMiPLKNLHKLYLIICKINN 449
Cdd:COG4886 213 SGNQLtdLPEPLANLTNLETLDLSNN-----QLTDLPELGNLTNLEELDLSNNQLTDLPPLA-NLTNLKTLDLSNNQLTD 286

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15238054 450 SFDQTAIDIAQIFPKLTDITIDYCDDLAELPSTICGITSLNSISITNCPNIKELPKNISKLQALQLL 516
Cdd:COG4886 287 LKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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