temperature-induced lipocalin [Arabidopsis thaliana]
Protein Classification
lipocalin family protein( domain architecture ID 10548543)
lipocalin/fatty-acid binding family protein similar to Arabidopsis thaliana temperature-induced lipocalin-1, which is involved in basal (BT) and acquired thermotolerance (AT), probably by preventing plasma membrane lipids peroxidation induced by severe heat-shock (HS)
List of domain hits
| Name | Accession | Description | Interval | E-value | |||
| Lipocalin_2 | pfam08212 | Lipocalin-like domain; Lipocalins are transporters for small hydrophobic molecules, such as ... |
13-160 | 1.59e-71 | |||
Lipocalin-like domain; Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The structure is an eight-stranded beta barrel. : Pssm-ID: 400495 Cd Length: 143 Bit Score: 212.58 E-value: 1.59e-71
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| Name | Accession | Description | Interval | E-value | ||||
| Lipocalin_2 | pfam08212 | Lipocalin-like domain; Lipocalins are transporters for small hydrophobic molecules, such as ... |
13-160 | 1.59e-71 | ||||
Lipocalin-like domain; Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The structure is an eight-stranded beta barrel. Pssm-ID: 400495 Cd Length: 143 Bit Score: 212.58 E-value: 1.59e-71
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| lipocalin_Blc-like | cd19438 | bacterial lipocalin Blc, Arabidopsis thaliana temperature-induced lipocalin-1, and similar ... |
10-158 | 1.93e-68 | ||||
bacterial lipocalin Blc, Arabidopsis thaliana temperature-induced lipocalin-1, and similar proteins; Escherichia coli bacterial lipocalin (Blc, also known as YjeL) is an outer membrane lipoprotein involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Blc has a binding preference for lysophospholipids. This group includes eukaryotic lipocalins such as Arabidopsis thaliana temperature-induced lipocalin-1 (TIL) which is involved in thermotolerance, oxidative, salt, drought and high light stress tolerance, and is needed for seed longevity by ensuring polyunsaturated lipids integrity. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development. Pssm-ID: 381213 Cd Length: 143 Bit Score: 204.72 E-value: 1.93e-68
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| Blc | COG3040 | Bacterial lipocalin Blc [Cell wall/membrane/envelope biogenesis]; |
5-165 | 1.29e-65 | ||||
Bacterial lipocalin Blc [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 442274 Cd Length: 178 Bit Score: 198.92 E-value: 1.29e-65
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| PRK10477 | PRK10477 | outer membrane lipoprotein Blc; Provisional |
2-155 | 6.93e-36 | ||||
outer membrane lipoprotein Blc; Provisional Pssm-ID: 182489 Cd Length: 177 Bit Score: 123.28 E-value: 6.93e-36
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| Name | Accession | Description | Interval | E-value | ||||
| Lipocalin_2 | pfam08212 | Lipocalin-like domain; Lipocalins are transporters for small hydrophobic molecules, such as ... |
13-160 | 1.59e-71 | ||||
Lipocalin-like domain; Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The structure is an eight-stranded beta barrel. Pssm-ID: 400495 Cd Length: 143 Bit Score: 212.58 E-value: 1.59e-71
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| lipocalin_Blc-like | cd19438 | bacterial lipocalin Blc, Arabidopsis thaliana temperature-induced lipocalin-1, and similar ... |
10-158 | 1.93e-68 | ||||
bacterial lipocalin Blc, Arabidopsis thaliana temperature-induced lipocalin-1, and similar proteins; Escherichia coli bacterial lipocalin (Blc, also known as YjeL) is an outer membrane lipoprotein involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Blc has a binding preference for lysophospholipids. This group includes eukaryotic lipocalins such as Arabidopsis thaliana temperature-induced lipocalin-1 (TIL) which is involved in thermotolerance, oxidative, salt, drought and high light stress tolerance, and is needed for seed longevity by ensuring polyunsaturated lipids integrity. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development. Pssm-ID: 381213 Cd Length: 143 Bit Score: 204.72 E-value: 1.93e-68
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| Blc | COG3040 | Bacterial lipocalin Blc [Cell wall/membrane/envelope biogenesis]; |
5-165 | 1.29e-65 | ||||
Bacterial lipocalin Blc [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 442274 Cd Length: 178 Bit Score: 198.92 E-value: 1.29e-65
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| lipocalin_apoD-like | cd19437 | apolipoprotein D and similar proteins; Human apolipoprotein D (ApoD) is a small glycoprotein ... |
8-160 | 7.07e-39 | ||||
apolipoprotein D and similar proteins; Human apolipoprotein D (ApoD) is a small glycoprotein associated with high density lipoproteins (HDL) in plasma. It appears promiscuous since it can bind hydrophobic ligands belonging to different lipid groups, with different shapes and biochemical properties; however, it exhibits specificity between very similar lipidic species. Some ligands, such as progesterone and arachidonic acid, bind to the ligand-binding pocket with high affinity, while others may interact with ApoD via its region of surface hydrophobicity. This hydrophobic surface cluster may facilitate its association with HDL particles and facilitate its insertion into cellular lipid membranes. Drosophila NLaz and Schistocerca Laz belong to this group, and share functional properties with human ApoD, including regulation of lifespan, lipid and carbohydrate metabolism control, and protection against oxidative stress or starvation. This group also includes Sandercyanin, a blue protein secreted in the skin mucus of blue forms of walleye, Sander vitreus. Walleye is an important golden yellow commercial and sport fish; the findings of blue walleye are recent. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development. Pssm-ID: 381212 [Multi-domain] Cd Length: 160 Bit Score: 130.44 E-value: 7.07e-39
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| PRK10477 | PRK10477 | outer membrane lipoprotein Blc; Provisional |
2-155 | 6.93e-36 | ||||
outer membrane lipoprotein Blc; Provisional Pssm-ID: 182489 Cd Length: 177 Bit Score: 123.28 E-value: 6.93e-36
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| lipocalin_FABP | cd00301 | lipocalin/cytosolic fatty acid-binding protein family; Lipocalins are diverse, mainly low ... |
17-129 | 1.61e-17 | ||||
lipocalin/cytosolic fatty acid-binding protein family; Lipocalins are diverse, mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules as well as membrane bound-receptors. They have a large beta-barrel ligand-binding cavity. Members include retinol-binding protein, retinoic acid-binding protein, complement protein C8 gamma, Can f 2, apolipoprotein D, extracellular fatty acid-binding protein, beta-lactoglobulin, oderant-binding protein, and bacterial lipocalin Blc. Lipocalins are involved in many important processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty acid-binding proteins also bind hydrophobic ligands in a non-covalent, reversible manner, and are involved in protection and shuttling of fatty acids within the cell, and in acquisition and removal of fatty acids from intracellular sites. Pssm-ID: 381182 Cd Length: 109 Bit Score: 74.12 E-value: 1.61e-17
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| Lipocalin | pfam00061 | Lipocalin / cytosolic fatty-acid binding protein family; Lipocalins are transporters for small ... |
19-162 | 1.91e-10 | ||||
Lipocalin / cytosolic fatty-acid binding protein family; Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The family also encompasses the enzyme prostaglandin D synthase (EC:5.3.99.2). Alignment subsumes both the lipocalin and fatty acid binding protein signatures from PROSITE. This is supported on structural and functional grounds. The structure is an eight-stranded beta barrel. Pssm-ID: 395015 Cd Length: 143 Bit Score: 56.29 E-value: 1.91e-10
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| lipocalin_Bla_g_4_Per_a_4 | cd19440 | major allergens Bla g 4 and Per a 4; Inhalant allergens from cockroaches are an important ... |
9-148 | 1.12e-04 | ||||
major allergens Bla g 4 and Per a 4; Inhalant allergens from cockroaches are an important cause of asthma. Bla g 4 and Per a 4 are male pheromone transport lipocalins, and both are major allergens. Bla g 4 is produced by Blattella germanica (German cockroach) and has been shown to bind two biogenic amines, tyramine and octopamine which may be its physiological ligands. Per a 4 is produced by Periplaneta americana (American cockroach) and may bind different ligands from Bla g 4 or have different modes for tyramine/octopamine binding. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development. Pssm-ID: 381215 Cd Length: 148 Bit Score: 40.55 E-value: 1.12e-04
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| lipocalin_CHL | cd19851 | chloroplastic lipocalin(CHL) similar to Arabidopsis CHL; Chloroplastic lipocalin (CHL) ... |
11-129 | 3.56e-03 | ||||
chloroplastic lipocalin(CHL) similar to Arabidopsis CHL; Chloroplastic lipocalin (CHL) prevents thylakoidal membrane lipids peroxidation and is protective against oxidative stress, especially mediated by singlet oxygen in response to excess light and other stress (e.g. heat shocks). CHL is required for seed longevity. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development. Pssm-ID: 381251 Cd Length: 141 Bit Score: 36.24 E-value: 3.56e-03
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