NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15607172|ref|NP_214544|]
View 

hypothetical protein Rv0030 [Mycobacterium tuberculosis H37Rv]

Protein Classification

DUF2710 domain-containing protein( domain architecture ID 10566902)

DUF2710 domain-containing protein similar to Mycobacterium tuberculosis protein Rv0030

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2710 pfam10921
Protein of unknown function (DUF2710); This family of proteins with unknown function appears ...
 3-106 1.31e-65

Protein of unknown function (DUF2710); This family of proteins with unknown function appears to be restricted to Mycobacteriaceae.


:

Pssm-ID: 287837  Cd Length: 104  Bit Score: 193.00  E-value: 1.31e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15607172     3 SGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELA 82
Cdd:pfam10921   1 SGPDSRAEPSQLSDKDLVESVLRDLREAADKWEALVAEAENTTYSVDLGDVRAVANSDGRLLELTLHPCVMSDYAHGELA 80

                          90       100
                  ....*....|....*....|....
gi 15607172    83 DRVNLAITALRDEVEAENRARYGG 106
Cdd:pfam10921  81 DRLNLAFTALRDEAEADFEARYGG 104
 
Name Accession Description Interval E-value
DUF2710 pfam10921
Protein of unknown function (DUF2710); This family of proteins with unknown function appears ...
 3-106 1.31e-65

Protein of unknown function (DUF2710); This family of proteins with unknown function appears to be restricted to Mycobacteriaceae.


Pssm-ID: 287837  Cd Length: 104  Bit Score: 193.00  E-value: 1.31e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15607172     3 SGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELA 82
Cdd:pfam10921   1 SGPDSRAEPSQLSDKDLVESVLRDLREAADKWEALVAEAENTTYSVDLGDVRAVANSDGRLLELTLHPCVMSDYAHGELA 80

                          90       100
                  ....*....|....*....|....
gi 15607172    83 DRVNLAITALRDEVEAENRARYGG 106
Cdd:pfam10921  81 DRLNLAFTALRDEAEADFEARYGG 104
 
Name Accession Description Interval E-value
DUF2710 pfam10921
Protein of unknown function (DUF2710); This family of proteins with unknown function appears ...
 3-106 1.31e-65

Protein of unknown function (DUF2710); This family of proteins with unknown function appears to be restricted to Mycobacteriaceae.


Pssm-ID: 287837  Cd Length: 104  Bit Score: 193.00  E-value: 1.31e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15607172     3 SGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELA 82
Cdd:pfam10921   1 SGPDSRAEPSQLSDKDLVESVLRDLREAADKWEALVAEAENTTYSVDLGDVRAVANSDGRLLELTLHPCVMSDYAHGELA 80

                          90       100
                  ....*....|....*....|....
gi 15607172    83 DRVNLAITALRDEVEAENRARYGG 106
Cdd:pfam10921  81 DRLNLAFTALRDEAEADFEARYGG 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH