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Conserved domains on  [gi|15596411|ref|NP_249905|]
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hypothetical protein PA1214 [Pseudomonas aeruginosa PAO1]

Protein Classification

asparagine synthetase B family protein( domain architecture ID 11417543)

asparagine synthetase B (glutamine-hydrolyzing) family protein may catalyze the ATP-dependent conversion of aspartate into asparagine, using glutamine as a source of nitrogen

CATH:  3.40.50.620
EC:  6.3.5.4
Gene Ontology:  GO:0006529|GO:0004066
MEROPS:  C44
PubMed:  11517925|12887050
SCOP:  4000340|4003831

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AsnB COG0367
Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; ...
1-528 1.83e-60

Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; Asparagine synthetase B (glutamine-hydrolyzing) is part of the Pathway/BioSystem: Asparagine biosynthesis


:

Pssm-ID: 440136 [Multi-domain]  Cd Length: 558  Bit Score: 208.54  E-value: 1.83e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   1 MCGILGYVGTGFSVSR--FAGALRLLAHRGPFGEGIAALPNGAIGMTRL---PMSGAAAVPLPPQEGQRRVAYNGEVY-- 73
Cdd:COG0367   1 MCGIAGIIDFDGGADRevLERMLDALAHRGPDGSGIWVDGGVALGHRRLsiiDLSEGGHQPMVSEDGRYVLVFNGEIYny 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  74 --------QAGCEIHGE--IRLLLDGLQR---GVLP--DGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQPERglLAFA 138
Cdd:COG0367  81 relraeleALGHRFRTHsdTEVILHAYEEwgeDCLErlNGMFAFAIWDRRERRLFLARDRFGIKPLYYAEDGGG--LAFA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 139 SEPRALLHLLGGARA-DAEAIAQVVAAGVPLEGQTLFQQVRLLLPGEVLRFDLSQErPRLCQRQRLATAPASEVDSLDEQ 217
Cdd:COG0367 159 SELKALLAHPGVDRElDPEALAEYLTLGYVPAPRTIFKGIRKLPPGHYLTVDAGGE-LEIRRYWDLEFVPHERSDSEEEA 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 218 LGETLERCRQTFR-------PCALLVSGGVDSN----LLGSYLDPQLQRFHLCLEGDEESLLPHPRL---------QRFE 277
Cdd:COG0367 238 VEELRELLEDAVRrrlradvPVGAFLSGGLDSSaiaaLAARLSKGPLKTFSIGFEDSAYDESPYARAvaehlgtehHEVT 317
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 278 LRQEAFMPLLRRAVGNFGGATRMSSLLMYQRLADGIGEQgYHCVLLGEGADELFWGYPRHLELWRRrdtpeprrfaaawf 357
Cdd:COG0367 318 VTPEDLLDALPDLVWHLDEPFADPSAVPTYLLSRLAREH-VKVVLSGEGADELFGGYPRYREAALL-------------- 382
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 358 geyrrkaaLLAEPAGRRVAERIEELAHEALGQGLEAAIGQFDLHYSLEP-LLRRADHLLMSRTIEARTPYLHGALAQRAG 436
Cdd:COG0367 383 --------LSPDFAEALGGELVPRLYAESGAEDPLRRMLYLDLKTYLPGdLLVKVDRMSMAHSLEVRVPFLDHRLVEFAL 454
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 437 RL---QRIVGDTAKAPLVALLEQR---EKRWqaQPKRHFRLPFERWpqALGEMRRHLAERL--PALHDLGLegLDAPSVA 508
Cdd:COG0367 455 SLppeLKLRGGRGKYLLRKALEGLlpdEVLD--RPKQGFPVPLGPW--LRGPLREWLEDLLsdESLAARGL--FDPDAVR 528
                       570       580       590
                ....*....|....*....|....*....|
gi 15596411 509 AL----------PGDQLFTLTTLSLWQQEY 528
Cdd:COG0367 529 RLleehlagrrdHSRKLWSLLMLELWLRRF 558
 
Name Accession Description Interval E-value
AsnB COG0367
Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; ...
1-528 1.83e-60

Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; Asparagine synthetase B (glutamine-hydrolyzing) is part of the Pathway/BioSystem: Asparagine biosynthesis


Pssm-ID: 440136 [Multi-domain]  Cd Length: 558  Bit Score: 208.54  E-value: 1.83e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   1 MCGILGYVGTGFSVSR--FAGALRLLAHRGPFGEGIAALPNGAIGMTRL---PMSGAAAVPLPPQEGQRRVAYNGEVY-- 73
Cdd:COG0367   1 MCGIAGIIDFDGGADRevLERMLDALAHRGPDGSGIWVDGGVALGHRRLsiiDLSEGGHQPMVSEDGRYVLVFNGEIYny 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  74 --------QAGCEIHGE--IRLLLDGLQR---GVLP--DGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQPERglLAFA 138
Cdd:COG0367  81 relraeleALGHRFRTHsdTEVILHAYEEwgeDCLErlNGMFAFAIWDRRERRLFLARDRFGIKPLYYAEDGGG--LAFA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 139 SEPRALLHLLGGARA-DAEAIAQVVAAGVPLEGQTLFQQVRLLLPGEVLRFDLSQErPRLCQRQRLATAPASEVDSLDEQ 217
Cdd:COG0367 159 SELKALLAHPGVDRElDPEALAEYLTLGYVPAPRTIFKGIRKLPPGHYLTVDAGGE-LEIRRYWDLEFVPHERSDSEEEA 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 218 LGETLERCRQTFR-------PCALLVSGGVDSN----LLGSYLDPQLQRFHLCLEGDEESLLPHPRL---------QRFE 277
Cdd:COG0367 238 VEELRELLEDAVRrrlradvPVGAFLSGGLDSSaiaaLAARLSKGPLKTFSIGFEDSAYDESPYARAvaehlgtehHEVT 317
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 278 LRQEAFMPLLRRAVGNFGGATRMSSLLMYQRLADGIGEQgYHCVLLGEGADELFWGYPRHLELWRRrdtpeprrfaaawf 357
Cdd:COG0367 318 VTPEDLLDALPDLVWHLDEPFADPSAVPTYLLSRLAREH-VKVVLSGEGADELFGGYPRYREAALL-------------- 382
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 358 geyrrkaaLLAEPAGRRVAERIEELAHEALGQGLEAAIGQFDLHYSLEP-LLRRADHLLMSRTIEARTPYLHGALAQRAG 436
Cdd:COG0367 383 --------LSPDFAEALGGELVPRLYAESGAEDPLRRMLYLDLKTYLPGdLLVKVDRMSMAHSLEVRVPFLDHRLVEFAL 454
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 437 RL---QRIVGDTAKAPLVALLEQR---EKRWqaQPKRHFRLPFERWpqALGEMRRHLAERL--PALHDLGLegLDAPSVA 508
Cdd:COG0367 455 SLppeLKLRGGRGKYLLRKALEGLlpdEVLD--RPKQGFPVPLGPW--LRGPLREWLEDLLsdESLAARGL--FDPDAVR 528
                       570       580       590
                ....*....|....*....|....*....|
gi 15596411 509 AL----------PGDQLFTLTTLSLWQQEY 528
Cdd:COG0367 529 RLleehlagrrdHSRKLWSLLMLELWLRRF 558
AsnB cd00712
Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine ...
2-196 2.07e-37

Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a synthetase domain. The N-terminal glutaminase domain hydrolyzes glutamine to glutamic acid and ammonia.


Pssm-ID: 238364 [Multi-domain]  Cd Length: 220  Bit Score: 137.30  E-value: 2.07e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   2 CGILGYV---GTGFSVSRFAGALRLLAHRGPFGEGIAALPNGAIGMTRL----------PMSGAaavplppqEGQRRVAY 68
Cdd:cd00712   1 CGIAGIIgldGASVDRATLERMLDALAHRGPDGSGIWIDEGVALGHRRLsiidlsggaqPMVSE--------DGRLVLVF 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  69 NGEVY-----QAGCEIHG---------EIRLLL------DGLQRgvLpDGMYALASWDPQTRQLTLLRDEFGIKPLYYSY 128
Cdd:cd00712  73 NGEIYnyrelRAELEALGhrfrthsdtEVILHLyeewgeDCLER--L-NGMFAFALWDKRKRRLFLARDRFGIKPLYYGR 149
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15596411 129 QPERglLAFASEPRALL-HLLGGARADAEAIAQVVAAGVPLEGQTLFQQVRLLLPGEVLRFDLSQERPR 196
Cdd:cd00712 150 DGGG--LAFASELKALLaLPGVPRELDEAALAEYLAFQYVPAPRTIFKGIRKLPPGHYLTVDPGGVEIR 216
Asn_synthase pfam00733
Asparagine synthase; This family is always found associated with pfam00310. Members of this ...
214-526 1.70e-35

Asparagine synthase; This family is always found associated with pfam00310. Members of this family catalyze the conversion of aspartate to asparagine.


Pssm-ID: 395594 [Multi-domain]  Cd Length: 279  Bit Score: 133.90  E-value: 1.70e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   214 LDEQLGETLERCRQTFRPCALLVSGGVDSN----LLGSYLDPQLQRFHLCLEGDEESLLPHPRL---------QRFELRQ 280
Cdd:pfam00733   2 LRELLEDAVARRLRADVPVGAFLSGGLDSSsiaaLAARQSPSPLHTFSIGFEGRGYDEAPYAREvaehlgtdhHELVVTP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   281 EAFMPLLRRAV----GNFGGATRMSSLLMYQRladgIGEQGYHCVLLGEGADELFWGYPRHLelwrrrdtpeprrfaaaw 356
Cdd:pfam00733  82 EDLLDALPDVIwhldEPFADPSAIPLYLLSRL----ARRKGVKVVLSGEGADELFGGYPFYK------------------ 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   357 fgeyrrkaallaepagrrvaerieelAHEALGQGLeaaigQFDLHYSLEPLLRRADHLLMSRTIEARTPYLHGALAQRAG 436
Cdd:pfam00733 140 --------------------------GEDPLRRML-----YLDLKTLLPGDLLRADRMSMAHGLEVRVPFLDHRLVEYAL 188
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   437 RL---QRIVGDTAKAPLVALLEQR-EKRWQAQPKRHFRLPFERWPQAlGEMRRHLAERLPALHDLGLEGLDAPSVAALPG 512
Cdd:pfam00733 189 RLppeLKLRGGIEKYILREALEGIlPDEILERPKEGFSAPVGDWKLR-GPLRELAEDLLSDSRLAKEGLLDREAVRELLD 267
                         330
                  ....*....|....
gi 15596411   513 DQLftLTTLSLWQQ 526
Cdd:pfam00733 268 EHL--AGMLELWLR 279
asn_synth_AEB TIGR01536
asparagine synthase (glutamine-hydrolyzing); This model describes the glutamine-hydrolysing ...
21-438 3.47e-33

asparagine synthase (glutamine-hydrolyzing); This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 273676 [Multi-domain]  Cd Length: 466  Bit Score: 131.69  E-value: 3.47e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    21 LRLLAHRGPFGEGIAALPNGAI-GMTRLPM--SGAAAVPLPPQEGQRRVAYNGEVYQagceiHGEIR------------- 84
Cdd:TIGR01536  22 SDTIAHRGPDASGIEYKDGNAIlGHRRLAIidLSGGAQPMSNEGKTYVIVFNGEIYN-----HEELReeleakgytfqtd 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    85 ----LLLDGLQR-GV----LPDGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQPERglLAFASEPRALLHLLGGARA-D 154
Cdd:TIGR01536  97 sdteVILHLYEEwGEecvdRLDGMFAFALWDSEKGELFLARDRFGIKPLYYAYDGGQ--LYFASEIKALLAHPNIKPFpD 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   155 AEAIAQVVAAGVPLEGQTLFQQVRLLLPGEVLRFD---LSQERPRLCQRQRLATAPASEVDSLDEQLGETLERCRQTFRP 231
Cdd:TIGR01536 175 GAALAPGFGFVRVPPPSTFFRGVFELEPGHDLPLDddgLNIERYYWERRDEHTDSEEDLVDELRSLLEDAVKRRLVADVP 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   232 CALLVSGGVDSNLLGSYLDPQ-----LQRFHLCLEGDEE-SLLPHPR---------LQRFELRQEAFMPLLRRAVGNFGG 296
Cdd:TIGR01536 255 VGVLLSGGLDSSLVAAIARREaprgpVHTFSIGFEGSPDfDESKYARkvadhlgteHHEVLFSVEEGLDALPEVIYHLEE 334
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   297 ATRM-SSLLMYqRLADGIGEQGYHCVLLGEGADELFWGYPRHLELwrrrdtpeprrfaaawfgeyrrkaallaePAGRRV 375
Cdd:TIGR01536 335 PTTIrASIPLY-LLSKLAREDGVKVVLSGEGADELFGGYLYFHEA-----------------------------PAAEAL 384
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15596411   376 AERIEELahealgqgleaaigqfDLHYSLEPLLRRADHLLMSRTIEARTPYLHGALAQRAGRL 438
Cdd:TIGR01536 385 REELQYL----------------DLELYMPGLLRRKDRMSMAHSLEVRVPFLDHELVEYALSI 431
asnB PRK09431
asparagine synthetase B; Provisional
1-334 9.94e-20

asparagine synthetase B; Provisional


Pssm-ID: 236513 [Multi-domain]  Cd Length: 554  Bit Score: 92.28  E-value: 9.94e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    1 MCGILGYVG----TGFSVSRFAGALRLLAHRGPFGEGIAALPNGAIGMTRL----PMSGAAavPLPPQEGQRRVAYNGEV 72
Cdd:PRK09431   1 MCGIFGILDiktdADELRKKALEMSRLMRHRGPDWSGIYASDNAILGHERLsivdVNGGAQ--PLYNEDGTHVLAVNGEI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   73 YQagceiHGEIRLLLDG---LQRG-----VLP-------------DGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQpE 131
Cdd:PRK09431  79 YN-----HQELRAELGDkyaFQTGsdcevILAlyqekgpdflddlDGMFAFALYDSEKDAYLIARDPIGIIPLYYGYD-E 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  132 RGLLAFASEPRAllhllggaradaeaiaqvvaagvpLEGQTlfQQVRLLLPGEVLRfdlSQERPRLCQRQRlataPASEV 211
Cdd:PRK09431 153 HGNLYFASEMKA------------------------LVPVC--KTIKEFPPGHYYW---SKDGEFVRYYQR----DWFDY 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  212 DSLDEQLgETLERCRQTFR-----------PCALLVSGGVDSNLLGS-----------------YLDPQLQRFHLCLEGD 263
Cdd:PRK09431 200 DAVKDNV-TDKNELRDALEaavkkrlmsdvPYGVLLSGGLDSSLISAiakkyaarriedderseAWWPQLHSFAVGLEGS 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  264 EEslLPHPRLQRFEL----------RQEAfMPLLRR---AVGNFGGATRMSSLLMYqRLADGIGEQGYHCVLLGEGADEL 330
Cdd:PRK09431 279 PD--LKAAREVADHLgtvhheihftVQEG-LDALRDviyHLETYDVTTIRASTPMY-LMARKIKAMGIKMVLSGEGADEL 354

                 ....
gi 15596411  331 FWGY 334
Cdd:PRK09431 355 FGGY 358
 
Name Accession Description Interval E-value
AsnB COG0367
Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; ...
1-528 1.83e-60

Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; Asparagine synthetase B (glutamine-hydrolyzing) is part of the Pathway/BioSystem: Asparagine biosynthesis


Pssm-ID: 440136 [Multi-domain]  Cd Length: 558  Bit Score: 208.54  E-value: 1.83e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   1 MCGILGYVGTGFSVSR--FAGALRLLAHRGPFGEGIAALPNGAIGMTRL---PMSGAAAVPLPPQEGQRRVAYNGEVY-- 73
Cdd:COG0367   1 MCGIAGIIDFDGGADRevLERMLDALAHRGPDGSGIWVDGGVALGHRRLsiiDLSEGGHQPMVSEDGRYVLVFNGEIYny 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  74 --------QAGCEIHGE--IRLLLDGLQR---GVLP--DGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQPERglLAFA 138
Cdd:COG0367  81 relraeleALGHRFRTHsdTEVILHAYEEwgeDCLErlNGMFAFAIWDRRERRLFLARDRFGIKPLYYAEDGGG--LAFA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 139 SEPRALLHLLGGARA-DAEAIAQVVAAGVPLEGQTLFQQVRLLLPGEVLRFDLSQErPRLCQRQRLATAPASEVDSLDEQ 217
Cdd:COG0367 159 SELKALLAHPGVDRElDPEALAEYLTLGYVPAPRTIFKGIRKLPPGHYLTVDAGGE-LEIRRYWDLEFVPHERSDSEEEA 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 218 LGETLERCRQTFR-------PCALLVSGGVDSN----LLGSYLDPQLQRFHLCLEGDEESLLPHPRL---------QRFE 277
Cdd:COG0367 238 VEELRELLEDAVRrrlradvPVGAFLSGGLDSSaiaaLAARLSKGPLKTFSIGFEDSAYDESPYARAvaehlgtehHEVT 317
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 278 LRQEAFMPLLRRAVGNFGGATRMSSLLMYQRLADGIGEQgYHCVLLGEGADELFWGYPRHLELWRRrdtpeprrfaaawf 357
Cdd:COG0367 318 VTPEDLLDALPDLVWHLDEPFADPSAVPTYLLSRLAREH-VKVVLSGEGADELFGGYPRYREAALL-------------- 382
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 358 geyrrkaaLLAEPAGRRVAERIEELAHEALGQGLEAAIGQFDLHYSLEP-LLRRADHLLMSRTIEARTPYLHGALAQRAG 436
Cdd:COG0367 383 --------LSPDFAEALGGELVPRLYAESGAEDPLRRMLYLDLKTYLPGdLLVKVDRMSMAHSLEVRVPFLDHRLVEFAL 454
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 437 RL---QRIVGDTAKAPLVALLEQR---EKRWqaQPKRHFRLPFERWpqALGEMRRHLAERL--PALHDLGLegLDAPSVA 508
Cdd:COG0367 455 SLppeLKLRGGRGKYLLRKALEGLlpdEVLD--RPKQGFPVPLGPW--LRGPLREWLEDLLsdESLAARGL--FDPDAVR 528
                       570       580       590
                ....*....|....*....|....*....|
gi 15596411 509 AL----------PGDQLFTLTTLSLWQQEY 528
Cdd:COG0367 529 RLleehlagrrdHSRKLWSLLMLELWLRRF 558
AsnB cd00712
Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine ...
2-196 2.07e-37

Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a synthetase domain. The N-terminal glutaminase domain hydrolyzes glutamine to glutamic acid and ammonia.


Pssm-ID: 238364 [Multi-domain]  Cd Length: 220  Bit Score: 137.30  E-value: 2.07e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   2 CGILGYV---GTGFSVSRFAGALRLLAHRGPFGEGIAALPNGAIGMTRL----------PMSGAaavplppqEGQRRVAY 68
Cdd:cd00712   1 CGIAGIIgldGASVDRATLERMLDALAHRGPDGSGIWIDEGVALGHRRLsiidlsggaqPMVSE--------DGRLVLVF 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  69 NGEVY-----QAGCEIHG---------EIRLLL------DGLQRgvLpDGMYALASWDPQTRQLTLLRDEFGIKPLYYSY 128
Cdd:cd00712  73 NGEIYnyrelRAELEALGhrfrthsdtEVILHLyeewgeDCLER--L-NGMFAFALWDKRKRRLFLARDRFGIKPLYYGR 149
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15596411 129 QPERglLAFASEPRALL-HLLGGARADAEAIAQVVAAGVPLEGQTLFQQVRLLLPGEVLRFDLSQERPR 196
Cdd:cd00712 150 DGGG--LAFASELKALLaLPGVPRELDEAALAEYLAFQYVPAPRTIFKGIRKLPPGHYLTVDPGGVEIR 216
Asn_synthase pfam00733
Asparagine synthase; This family is always found associated with pfam00310. Members of this ...
214-526 1.70e-35

Asparagine synthase; This family is always found associated with pfam00310. Members of this family catalyze the conversion of aspartate to asparagine.


Pssm-ID: 395594 [Multi-domain]  Cd Length: 279  Bit Score: 133.90  E-value: 1.70e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   214 LDEQLGETLERCRQTFRPCALLVSGGVDSN----LLGSYLDPQLQRFHLCLEGDEESLLPHPRL---------QRFELRQ 280
Cdd:pfam00733   2 LRELLEDAVARRLRADVPVGAFLSGGLDSSsiaaLAARQSPSPLHTFSIGFEGRGYDEAPYAREvaehlgtdhHELVVTP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   281 EAFMPLLRRAV----GNFGGATRMSSLLMYQRladgIGEQGYHCVLLGEGADELFWGYPRHLelwrrrdtpeprrfaaaw 356
Cdd:pfam00733  82 EDLLDALPDVIwhldEPFADPSAIPLYLLSRL----ARRKGVKVVLSGEGADELFGGYPFYK------------------ 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   357 fgeyrrkaallaepagrrvaerieelAHEALGQGLeaaigQFDLHYSLEPLLRRADHLLMSRTIEARTPYLHGALAQRAG 436
Cdd:pfam00733 140 --------------------------GEDPLRRML-----YLDLKTLLPGDLLRADRMSMAHGLEVRVPFLDHRLVEYAL 188
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   437 RL---QRIVGDTAKAPLVALLEQR-EKRWQAQPKRHFRLPFERWPQAlGEMRRHLAERLPALHDLGLEGLDAPSVAALPG 512
Cdd:pfam00733 189 RLppeLKLRGGIEKYILREALEGIlPDEILERPKEGFSAPVGDWKLR-GPLRELAEDLLSDSRLAKEGLLDREAVRELLD 267
                         330
                  ....*....|....
gi 15596411   513 DQLftLTTLSLWQQ 526
Cdd:pfam00733 268 EHL--AGMLELWLR 279
asn_synth_AEB TIGR01536
asparagine synthase (glutamine-hydrolyzing); This model describes the glutamine-hydrolysing ...
21-438 3.47e-33

asparagine synthase (glutamine-hydrolyzing); This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 273676 [Multi-domain]  Cd Length: 466  Bit Score: 131.69  E-value: 3.47e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    21 LRLLAHRGPFGEGIAALPNGAI-GMTRLPM--SGAAAVPLPPQEGQRRVAYNGEVYQagceiHGEIR------------- 84
Cdd:TIGR01536  22 SDTIAHRGPDASGIEYKDGNAIlGHRRLAIidLSGGAQPMSNEGKTYVIVFNGEIYN-----HEELReeleakgytfqtd 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    85 ----LLLDGLQR-GV----LPDGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQPERglLAFASEPRALLHLLGGARA-D 154
Cdd:TIGR01536  97 sdteVILHLYEEwGEecvdRLDGMFAFALWDSEKGELFLARDRFGIKPLYYAYDGGQ--LYFASEIKALLAHPNIKPFpD 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   155 AEAIAQVVAAGVPLEGQTLFQQVRLLLPGEVLRFD---LSQERPRLCQRQRLATAPASEVDSLDEQLGETLERCRQTFRP 231
Cdd:TIGR01536 175 GAALAPGFGFVRVPPPSTFFRGVFELEPGHDLPLDddgLNIERYYWERRDEHTDSEEDLVDELRSLLEDAVKRRLVADVP 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   232 CALLVSGGVDSNLLGSYLDPQ-----LQRFHLCLEGDEE-SLLPHPR---------LQRFELRQEAFMPLLRRAVGNFGG 296
Cdd:TIGR01536 255 VGVLLSGGLDSSLVAAIARREaprgpVHTFSIGFEGSPDfDESKYARkvadhlgteHHEVLFSVEEGLDALPEVIYHLEE 334
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   297 ATRM-SSLLMYqRLADGIGEQGYHCVLLGEGADELFWGYPRHLELwrrrdtpeprrfaaawfgeyrrkaallaePAGRRV 375
Cdd:TIGR01536 335 PTTIrASIPLY-LLSKLAREDGVKVVLSGEGADELFGGYLYFHEA-----------------------------PAAEAL 384
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15596411   376 AERIEELahealgqgleaaigqfDLHYSLEPLLRRADHLLMSRTIEARTPYLHGALAQRAGRL 438
Cdd:TIGR01536 385 REELQYL----------------DLELYMPGLLRRKDRMSMAHSLEVRVPFLDHELVEYALSI 431
asnB PRK09431
asparagine synthetase B; Provisional
1-334 9.94e-20

asparagine synthetase B; Provisional


Pssm-ID: 236513 [Multi-domain]  Cd Length: 554  Bit Score: 92.28  E-value: 9.94e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    1 MCGILGYVG----TGFSVSRFAGALRLLAHRGPFGEGIAALPNGAIGMTRL----PMSGAAavPLPPQEGQRRVAYNGEV 72
Cdd:PRK09431   1 MCGIFGILDiktdADELRKKALEMSRLMRHRGPDWSGIYASDNAILGHERLsivdVNGGAQ--PLYNEDGTHVLAVNGEI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   73 YQagceiHGEIRLLLDG---LQRG-----VLP-------------DGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQpE 131
Cdd:PRK09431  79 YN-----HQELRAELGDkyaFQTGsdcevILAlyqekgpdflddlDGMFAFALYDSEKDAYLIARDPIGIIPLYYGYD-E 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  132 RGLLAFASEPRAllhllggaradaeaiaqvvaagvpLEGQTlfQQVRLLLPGEVLRfdlSQERPRLCQRQRlataPASEV 211
Cdd:PRK09431 153 HGNLYFASEMKA------------------------LVPVC--KTIKEFPPGHYYW---SKDGEFVRYYQR----DWFDY 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  212 DSLDEQLgETLERCRQTFR-----------PCALLVSGGVDSNLLGS-----------------YLDPQLQRFHLCLEGD 263
Cdd:PRK09431 200 DAVKDNV-TDKNELRDALEaavkkrlmsdvPYGVLLSGGLDSSLISAiakkyaarriedderseAWWPQLHSFAVGLEGS 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  264 EEslLPHPRLQRFEL----------RQEAfMPLLRR---AVGNFGGATRMSSLLMYqRLADGIGEQGYHCVLLGEGADEL 330
Cdd:PRK09431 279 PD--LKAAREVADHLgtvhheihftVQEG-LDALRDviyHLETYDVTTIRASTPMY-LMARKIKAMGIKMVLSGEGADEL 354

                 ....
gi 15596411  331 FWGY 334
Cdd:PRK09431 355 FGGY 358
Gn_AT_II cd00352
Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide ...
2-147 7.70e-18

Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthetase B synthesizes asparagine from aspartate and glutamine. Beta-LS catalyzes the formation of the beta-lactam ring in the beta-lactamase inhibitor clavulanic acid. GltS synthesizes L-glutamate from 2-oxoglutarate and L-glutamine. These enzymes are generally dimers, but GPATase also exists as a homotetramer.


Pssm-ID: 238212 [Multi-domain]  Cd Length: 220  Bit Score: 82.50  E-value: 7.70e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   2 CGILGYVGTGFSVSRFA----GALRLLAHRGPFGEGIAALPNG---------------------------AIGMTRL--- 47
Cdd:cd00352   1 CGIFGIVGADGAASLLLllllRGLAALEHRGPDGAGIAVYDGDglfvekragpvsdvaldlldeplksgvALGHVRLatn 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  48 -PMSGAAAVPLPPQEGQRRVAYNGEVY----------QAGCEIHGE------IRLLLDGLQRGVLP----------DGMY 100
Cdd:cd00352  81 gLPSEANAQPFRSEDGRIALVHNGEIYnyrelreeleARGYRFEGEsdseviLHLLERLGREGGLFeavedalkrlDGPF 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 15596411 101 ALASWDPQTRQLTLLRDEFGIKPLYYSYQPErGLLAFASEPRALLHL 147
Cdd:cd00352 161 AFALWDGKPDRLFAARDRFGIRPLYYGITKD-GGLVFASEPKALLAL 206
GATase_7 pfam13537
Glutamine amidotransferase domain; This domain is a class-II glutamine amidotransferase domain ...
66-145 3.84e-16

Glutamine amidotransferase domain; This domain is a class-II glutamine amidotransferase domain found in a variety of enzymes such as asparagine synthetase and glutamine-fructose-6-phosphate transaminase.


Pssm-ID: 433289 [Multi-domain]  Cd Length: 123  Bit Score: 74.86  E-value: 3.84e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    66 VAYNGEVY----------QAGCEIHGEI--RLLLDGLQRGVLPD------GMYALASWDPQTRQLTLLRDEFGIKPLYYS 127
Cdd:pfam13537  26 IVFNGEIYnyrelraeleAKGYRFRTHSdtEVILHLYEAEWGEDcvdrlnGMFAFAIWDRRRQRLFLARDRFGIKPLYYG 105
                          90
                  ....*....|....*...
gi 15596411   128 YQPERGLLaFASEPRALL 145
Cdd:pfam13537 106 RDDGGRLL-FASELKALL 122
GATase_6 pfam13522
Glutamine amidotransferase domain; This domain is a class-II glutamine amidotransferase domain ...
29-140 1.02e-12

Glutamine amidotransferase domain; This domain is a class-II glutamine amidotransferase domain found in a variety of enzymes, such as asparagine synthetase and glutamine--fructose-6-phosphate transaminase.


Pssm-ID: 433279 [Multi-domain]  Cd Length: 130  Bit Score: 65.02  E-value: 1.02e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    29 PFGEGIAALPNGAIGMTRLPMSG---AAAVPLPPQEGQRRVAYNGEVYQagceiHGEIRLLLDGLQR------------- 92
Cdd:pfam13522   1 PDFSGIWVEGGVALGHVRLAIVDlpdAGNQPMLSRDGRLVLVHNGEIYN-----YGELREELADLGHafrsrsdtevlla 75
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15596411    93 -------GVLP--DGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQPerGLLAFASE 140
Cdd:pfam13522  76 lyeewgeDCLErlRGMFAFAIWDRRRRTLFLARDRLGIKPLYYGILG--GGFVFASE 130
PTZ00077 PTZ00077
asparagine synthetase-like protein; Provisional
1-334 1.53e-11

asparagine synthetase-like protein; Provisional


Pssm-ID: 185431 [Multi-domain]  Cd Length: 586  Bit Score: 66.66  E-value: 1.53e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    1 MCGILGY---VGTGFSVSRFAGAL-RLLAHRGPFGEGIAALPNG-----AIGMTRL----PMSGAAavPLPPQEGQRRVA 67
Cdd:PTZ00077   1 MCGILAIfnsKGERHELRRKALELsKRLRHRGPDWSGIIVLENSpgtynILAHERLaivdLSDGKQ--PLLDDDETVALM 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   68 YNGEVYQagceiHGEIRLLL--DGLQRG------VLP---------------DGMYALASWDPQTRQLTLLRDEFGIKPL 124
Cdd:PTZ00077  79 QNGEIYN-----HWEIRPELekEGYKFSsnsdceIIGhlykeygpkdfwnhlDGMFATVIYDMKTNTFFAARDHIGIIPL 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  125 YYSYQPErGLLAFASEPRALLhllggaradaeaiAQVVaagvplegqtlfqQVRLLLPGEVlrFDLSQERPRLCQ----- 199
Cdd:PTZ00077 154 YIGYAKD-GSIWFSSELKALH-------------DQCV-------------EVKQFPPGHY--YDQTKEKGEFVRyynpn 204
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  200 -RQRLATAPASEVD--SLDEQLGETLERCRQTFRPCALLVSGGVDSNLLGSYLDPQLQrfhlclEGDEE-SLLPHPRLQR 275
Cdd:PTZ00077 205 wHDFDHPIPTGEIDleEIREALEAAVRKRLMGDVPFGLFLSGGLDSSIVAAIVAKLIK------NGEIDlSKRGMPKLHS 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  276 FELRQEAfMPLLR--RAVGNFGG-----------------------------ATRMSSLLMYQrLADGIGEQGYHCVLLG 324
Cdd:PTZ00077 279 FCIGLEG-SPDLKaaRKVAEYLGtehheftftveegidalpdviyhtetydvTTIRASTPMYL-LSRRIKALGIKMVLSG 356
                        410
                 ....*....|
gi 15596411  325 EGADELFWGY 334
Cdd:PTZ00077 357 EGSDELFGGY 366
Asn_synthase_B_C cd01991
C-terminal domain of asparagine synthase B; The C-terminal domain of asparagine synthase (or ...
230-438 4.69e-09

C-terminal domain of asparagine synthase B; The C-terminal domain of asparagine synthase (or synthetase) B is always associated with an N-terminal amidotransferase domain. Family members that contain this domain catalyze the conversion of aspartate to asparagine. Asparagine synthase B catalyzes the synthesis of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase.


Pssm-ID: 467495 [Multi-domain]  Cd Length: 224  Bit Score: 56.90  E-value: 4.69e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 230 RPCALLVSGGVDSNLLGSYLDPQLQR-----FHLCLEGDEESLLPHPR-----LQR----FELRQEAFMPLLRRAVGNFG 295
Cdd:cd01991   3 VPVGVLLSGGLDSSLIAALAARLLPEtpidlFTVGFEGSPTPDRAAARrvaeeLGTehheVEVTIEELLDALPDVILIYP 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411 296 GATRM---SSLLMYQrLADGIGEQGYHCVLLGEGADELFWGYPRHLELWRRRdtpePRRFAAAWfgeyrrkaallaepag 372
Cdd:cd01991  83 TDTPMdlsIAIPLYF-ASRLAGKLGAKVVLSGEGADELFGGYSRHRDAPLRG----WEALEEEL---------------- 141
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15596411 373 rrvAERIEELAHEALGqgleaaigqfdlhyslepllrRADHLLMSRTIEARTPYLHGALAQRAGRL 438
Cdd:cd01991 142 ---LRDLDRLWTRNLG---------------------RDDRVAMAHGLEARVPFLDEELVEFALSL 183
PLN02549 PLN02549
asparagine synthase (glutamine-hydrolyzing)
1-334 2.12e-08

asparagine synthase (glutamine-hydrolyzing)


Pssm-ID: 178164 [Multi-domain]  Cd Length: 578  Bit Score: 56.70  E-value: 2.12e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411    1 MCGILGYVG-TGFSV---SRFAGALRLLAHRGPFGEGIAALPNGAIGMTRL----PMSGAAavPLPPQEGQRRVAYNGEV 72
Cdd:PLN02549   1 MCGILAVLGcSDDSQakrSRVLELSRRLRHRGPDWSGLYGNEDCYLAHERLaimdPESGDQ--PLYNEDKTIVVTANGEI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   73 Y----------------QAGCEI-------HGE--IRLLldglqrgvlpDGMYALASWDPQTRQLTLLRDEFGIKPLYYS 127
Cdd:PLN02549  79 YnhkelreklklhkfrtGSDCEViahlyeeHGEefVDML----------DGMFSFVLLDTRDNSFIAARDHIGITPLYIG 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  128 YQpERGLLAFASEPRALlhllggaRADAEAIaQVVAAG---VPLEGQTlfqqVRLLLPGEVLRFDlsqerprlcqrqrla 204
Cdd:PLN02549 149 WG-LDGSVWFASEMKAL-------CDDCERF-EEFPPGhyySSKAGGF----RRWYNPPWFSESI--------------- 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  205 taPASEVDSLdeQLGETLERC--RQTFR--PCALLVSGGVDSNLLGSYLDPQlqrfhlcLEGDEESLLPHPRLQRFELRQ 280
Cdd:PLN02549 201 --PSTPYDPL--VLREAFEKAviKRLMTdvPFGVLLSGGLDSSLVASIAARH-------LAETKAARQWGQQLHSFCVGL 269
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  281 EAfMPLLR--RAVGNFGG-----------------------------ATRMSSLLMYqRLADGIGEQGYHCVLLGEGADE 329
Cdd:PLN02549 270 EG-SPDLKaaREVADYLGtvhhefhftvqegidaiedviyhletydvTTIRASTPMF-LMSRKIKSLGVKMVLSGEGSDE 347

                 ....*
gi 15596411  330 LFWGY 334
Cdd:PLN02549 348 IFGGY 352
Gn_AT_II_novel cd03766
Gn_AT_II_novel. This asparagine synthase-related domain is present in eukaryotes but its ...
1-139 2.00e-04

Gn_AT_II_novel. This asparagine synthase-related domain is present in eukaryotes but its function has not yet been determined. The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthetase B synthesizes asparagine from aspartate and glutamine. Beta-LS catalyzes the formation of the beta-lactam ring in the beta-lactamase inhibitor clavulanic acid. GltS synthesizes L-glutamate from 2-oxoglutarate and L-glutamine. These enzymes are generally dimers, but GPATase also exists as a homotetramer.


Pssm-ID: 239735 [Multi-domain]  Cd Length: 181  Bit Score: 42.27  E-value: 2.00e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411   1 MCGILGYVGTGFSVSR----FAGALRLLAHRGP--FGEGIAALPNGAIGM--TRLPMSGAAAV--PLPPQEGQRRVAYNG 70
Cdd:cd03766   1 MCGILCSVSPSGPHINssllSEELLPNLRNRGPdyLSTRQLSVTNWTLLFtsSVLSLRGDHVTrqPLVDQSTGNVLQWNG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  71 EVYQAGCEIHGE--IRLLLDGLQR------GVLP-----DGMYALASWDPQTRQLTLLRDEFGIKPLYYSYQPERGLLAF 137
Cdd:cd03766  81 ELYNIDGVEDEEndTEVIFELLANcssesqDILDvlssiEGPFAFIYYDASENKLYFGRDCLGRRSLLYKLDPNGFELSI 160

                ..
gi 15596411 138 AS 139
Cdd:cd03766 161 SS 162
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
136-521 2.31e-03

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 41.01  E-value: 2.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  136 AFASEPRALLHLLGGARADA----EAIAQVVAAGVPLEGQTLFQQV---RLLLPG-----EVLRFDLSQERPRLCQRQRL 203
Cdd:COG3321  811 LAAAGDAVVLPSLRRGEDELaqllTALAQLWVAGVPVDWSALYPGRgrrRVPLPTypfqrEDAAAALLAAALAAALAAAA 890
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  204 ATAPASEVDSLDEQLGETLERCRQTFRPCALLVSGGVDSNLLGSYLDPQLQRFHLCLEGDEESLLPHPRLQRFELRQEAF 283
Cdd:COG3321  891 ALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAAALLALAAAAAAAAAALAAAEAGALLLLAAA 970
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  284 MPLLRRAVGNFGGATRMSSLLMYQRLADGIGEQGYHCVLLGEGADELFWGYPRHLELWRRRDTPEPRRFAAAWFGEYRRK 363
Cdd:COG3321  971 AAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAA 1050
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596411  364 AALLAEPAGRRVAERIEELAHEALGQGLEAAIGQFDLHYSLEPLLRRADHLLMSRTIEARTPYLHGALAQRAGRLQRIVG 443
Cdd:COG3321 1051 LAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALALAALAAALLLLALLAALALAAAAAALLALAAL 1130
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15596411  444 DTAKAPLVALLEQREKRWQAQPKRHFRLPFERWPQALGEMRRHLAERLPALHDLGLEGLDAPSVAALPGDQLFTLTTL 521
Cdd:COG3321 1131 LAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALALALAAALAAALAGLAALLLAALLAALLAAL 1208
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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