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Conserved domains on  [gi|15596639|ref|NP_250133|]
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flagellar basal body protein FliL [Pseudomonas aeruginosa PAO1]

Protein Classification

flagellar basal body-associated protein FliL( domain architecture ID 10012522)

flagellar basal body-associated protein FliL interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliL PRK05696
flagellar basal body-associated protein FliL; Reviewed
 1-173 3.21e-69

flagellar basal body-associated protein FliL; Reviewed


:

Pssm-ID: 180207  Cd Length: 170  Bit Score: 207.50  E-value: 3.21e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    1 MAKKEATPADAGAPsggKSKLKLILLIVVGLLLAIGLSvGGTWFFLSKSLKAEKTE-EVASEAAKPGKQPALYEILAPAF 79
Cdd:PRK05696   1 MAEEEALELEDEAP---KSKKKLIIIIVIGVLLALGGG-GAAWFFMGSSDKAAAAAaEAAAEAAAAVKGPALYVPMPRPF 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639   80 VVNFNQNGRQRYMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAKKETGQ 159
Cdd:PRK05696  77 VFNVPGNGRDRLVQIKVQLMVRGSDDEELAKKHIPLIESALLMTFSSATVDQLSTPAGKEELRQKALASVQETLQKVTGK 156

                        170
                 ....*....|....
gi 15596639  160 LAIEQVLFTNFVLQ 173
Cdd:PRK05696 157 PVVEKVLFTGFVMQ 170
 
Name Accession Description Interval E-value
fliL PRK05696
flagellar basal body-associated protein FliL; Reviewed
 1-173 3.21e-69

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 180207  Cd Length: 170  Bit Score: 207.50  E-value: 3.21e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    1 MAKKEATPADAGAPsggKSKLKLILLIVVGLLLAIGLSvGGTWFFLSKSLKAEKTE-EVASEAAKPGKQPALYEILAPAF 79
Cdd:PRK05696   1 MAEEEALELEDEAP---KSKKKLIIIIVIGVLLALGGG-GAAWFFMGSSDKAAAAAaEAAAEAAAAVKGPALYVPMPRPF 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639   80 VVNFNQNGRQRYMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAKKETGQ 159
Cdd:PRK05696  77 VFNVPGNGRDRLVQIKVQLMVRGSDDEELAKKHIPLIESALLMTFSSATVDQLSTPAGKEELRQKALASVQETLQKVTGK 156

                        170
                 ....*....|....
gi 15596639  160 LAIEQVLFTNFVLQ 173
Cdd:PRK05696 157 PVVEKVLFTGFVMQ 170
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
11-173 3.67e-36

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 122.76  E-value: 3.67e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639  11 AGAPSGGKSKLKLILLIVVGLLLAIGlsvGGTWFFLSKSLKAEKTEEVASEAAKPgkqPALYEIlaPAFVVNFNQNGRQR 90
Cdd:COG1580   2 AEAKKGGKKKLILIILALVVLLLAAG---GGAYFLLGSGAAAEAAEAAAAEPKPP---PVYVPL--DPFTVNLADGGRDR 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639  91 YMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAKKETGqlaIEQVLFTNF 170
Cdd:COG1580  74 YLKVGITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVLGKEGK---VEDVLFTEF 150


                ...
gi 15596639 171 VLQ 173
Cdd:COG1580 151 VVQ 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 75-173 6.14e-29

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 102.74  E-value: 6.14e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    75 LAPAFVVNFNQNGRQRYMQVGVALMGRDKAQMDALrehMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAK 154
Cdd:pfam03748   3 LEPPFTVNLADGDGDRYLKVSIALEVDDEEALEKR---MPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKVLG 79

                          90
                  ....*....|....*....
gi 15596639   155 KETGQLAIEQVLFTNFVLQ 173
Cdd:pfam03748  80 EKLGKGPVEDVLFTEFVVQ 98
 
Name Accession Description Interval E-value
fliL PRK05696
flagellar basal body-associated protein FliL; Reviewed
 1-173 3.21e-69

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 180207  Cd Length: 170  Bit Score: 207.50  E-value: 3.21e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    1 MAKKEATPADAGAPsggKSKLKLILLIVVGLLLAIGLSvGGTWFFLSKSLKAEKTE-EVASEAAKPGKQPALYEILAPAF 79
Cdd:PRK05696   1 MAEEEALELEDEAP---KSKKKLIIIIVIGVLLALGGG-GAAWFFMGSSDKAAAAAaEAAAEAAAAVKGPALYVPMPRPF 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639   80 VVNFNQNGRQRYMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAKKETGQ 159
Cdd:PRK05696  77 VFNVPGNGRDRLVQIKVQLMVRGSDDEELAKKHIPLIESALLMTFSSATVDQLSTPAGKEELRQKALASVQETLQKVTGK 156

                        170
                 ....*....|....
gi 15596639  160 LAIEQVLFTNFVLQ 173
Cdd:PRK05696 157 PVVEKVLFTGFVMQ 170
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
11-173 3.67e-36

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 122.76  E-value: 3.67e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639  11 AGAPSGGKSKLKLILLIVVGLLLAIGlsvGGTWFFLSKSLKAEKTEEVASEAAKPgkqPALYEIlaPAFVVNFNQNGRQR 90
Cdd:COG1580   2 AEAKKGGKKKLILIILALVVLLLAAG---GGAYFLLGSGAAAEAAEAAAAEPKPP---PVYVPL--DPFTVNLADGGRDR 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639  91 YMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAKKETGqlaIEQVLFTNF 170
Cdd:COG1580  74 YLKVGITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVLGKEGK---VEDVLFTEF 150


                ...
gi 15596639 171 VLQ 173
Cdd:COG1580 151 VVQ 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 75-173 6.14e-29

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 102.74  E-value: 6.14e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    75 LAPAFVVNFNQNGRQRYMQVGVALMGRDKAQMDALrehMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAK 154
Cdd:pfam03748   3 LEPPFTVNLADGDGDRYLKVSIALEVDDEEALEKR---MPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKVLG 79

                          90
                  ....*....|....*....
gi 15596639   155 KETGQLAIEQVLFTNFVLQ 173
Cdd:pfam03748  80 EKLGKGPVEDVLFTEFVVQ 98
PRK05697 PRK05697
flagellar basal body-associated protein FliL-like protein; Validated
 58-173 8.00e-26

flagellar basal body-associated protein FliL-like protein; Validated


Pssm-ID: 235565  Cd Length: 137  Bit Score: 95.76  E-value: 8.00e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639   58 VASEAAKPGKQPALYEiLAPAFVVNFNQNGRQ-RYMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPV 136
Cdd:PRK05697  22 AEAEEAPEAPKYAYYG-LEPDIVTNYISDGKKlGYVKIDVELMVKDPDDLAAVEHHDPLIRNALVELLGQQTEDKVKSLT 100

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 15596639  137 GKEMLRQQATAGLQELAKKETGQLAIEQVLFTNFVLQ 173
Cdd:PRK05697 101 GREEIRQECLKQVNELLEQETGKPLVVDLLFTKYIYQ 137
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 6-173 4.62e-25

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 94.58  E-value: 4.62e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    6 ATPADAGAPSGGKSKLKLILLIVVGlllAIGLSVGGTWFFLSKslkaEKTEEVASEAAKPGKQPALYEIlaPAFVVNFNQ 85
Cdd:PRK07021   3 SDSAIPPAKSGKKRKLWLIILILLL---LAAAAGAGYSWWLSK----EQATAAAKAAPAPPPAPVFFPL--ETFTVNLQP 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639   86 -NGRQRYMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAKKETGQLAIEQ 164
Cdd:PRK07021  74 dDDADRVLYVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTD 153


                 ....*....
gi 15596639  165 VLFTNFVLQ 173
Cdd:PRK07021 154 VLFTAFILQ 162
fliL PRK12785
flagellar basal body-associated protein FliL; Reviewed
 1-116 7.93e-06

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 183743 [Multi-domain]  Cd Length: 166  Bit Score: 43.89  E-value: 7.93e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    1 MAKKE--ATPADAGAPSGGKSKLKLILLIVVGLLLAIGLSvGGTWFFLSKSLKAEKTEevasEAAKPGKQPALYEIlaPA 78
Cdd:PRK12785   1 MAKKPkkAPAAEGGEGAAPPKKKKKLIIIAAAAVLLLGGG-GGGFFFFFSHGHGEHHA----EAAEPKKPPVFVDV--PD 73

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 15596639   79 FVVNF--NQNGRQRYMQVGVALMGRDKAQMDALREHMPLV 116
Cdd:PRK12785  74 MLVNLagDPGERVQYLKLKVVLEVKDEKVVEQIKPLMPRV 113
fliL PRK08455
flagellar basal body-associated protein FliL; Reviewed
 1-173 2.06e-03

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 181433 [Multi-domain]  Cd Length: 182  Bit Score: 36.97  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639    1 MAKKEATPAdagapSGGKSKLKLILLIVVGLLLAIGLSVGGTWFFLSKSLKAEK------TEEVASEAAKPGKQPA---- 70
Cdd:PRK08455   1 MAEEQENEA-----QQKKKKSKALLIIIIGVVVLLLLIVGVIAMLLMGSKEEEKenaqkpTQEVQANPPANSAQEAkegs 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596639   71 ----------LYEIlaPAFVVNF-NQNGRqRYMQVGVALMGRDKAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKE 139
Cdd:PRK08455  76 niqdflnigpLYPL--DPFTVNLlSQSGR-RYLKTSISLELSNEKLKPELDKKDPVIRDIIIRILSSKTVEEVSTNKGKE 152

                        170       180       190
                 ....*....|....*....|....*....|....
gi 15596639  140 MLRQQATAGLQELAKKetGQlaIEQVLFTNFVLQ 173
Cdd:PRK08455 153 RLKDEIVGKLNEFLID--GF--IKNVFFTDFVVQ 182
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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