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amino acid permease [Pseudomonas aeruginosa PAO1]
Protein Classification
APC family permease ( domain architecture ID 11425014 )
APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton
List of domain hits
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-447
1.36e-50
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 177.40
E-value: 1.36e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 4 S PAPE S A LK PT LG V FD V VA IT V S A VTP A S s V FV IAPF A IQQ AG TG A FW A FAL AG V LAL MF A WC YAEL GR A HST AGG E Y V Y 83
Cdd:COG0531 2 S RGES S E LK RK LG L FD L VA LG V G A IIG A G - I FV LPGL A AGL AG PA A IL A WLI AG L LAL LV A LS YAEL AS A FPR AGG A Y T Y 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 84 A K R VF G G L A G YATFLTV L AMLLFIPPVL A TGAAT YL NAALGTHFD a QTV AL AIVAFSY LL GILNIRVN A W V TGTCLL L EV 163
Cdd:COG0531 81 A R R AL G P L L G FLAGWAL L LSYVLAVAAV A VAFGG YL SSLFPAGGS - VLI AL VLILLLT LL NLRGVKES A K V NNILTV L KL 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 164 AA LL VIVGL G FGHAQQPASVLLQ P QVV G dggllaiap WAL V IG A VGT A L F SYN GF GGAVL LAE DM K DGGHSVH RA VLW SL 243
Cdd:COG0531 160 LV LL LFIVV G LFAFDPANFTPFL P AGG G --------- LSG V LA A LAL A F F AFT GF EAIAN LAE EA K NPKRNIP RA IIL SL 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 244 AL V VLIE I V p LAAL L I G APSLPAML AS PD P IGYLLNSHGNETLSR L VSA G IF LS VFN A IV A IVIQSA R VIFSSG RD A L wm 323
Cdd:COG0531 231 LI V GVLY I L - VSLA L T G VVPYDELA AS GA P LADAAEAVFGPWGAI L IAL G AL LS LLG A LN A SILGAS R LLYAMA RD G L -- 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 324 pa L NRA F TRI HPR WES P WL A T L FLAIPSA -- A L SFSSNLAE L T S FTVLLIVMV YL I VAL CALFS R VL R R D REH P Y R M P l W 401
Cdd:COG0531 308 -- L PKV F AKV HPR FGT P VN A I L LTGVIAL ll L L LGAASFTA L A S LASVGVLLA YL L VAL AVIVL R RR R P D LPR P F R V P - L 384
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 15596682 402 PL PAL L AVSGAGY LL LN L FLA A sard VM I IVG LLA VSVI LY CT Y GK 447
Cdd:COG0531 385 PL IPI L GILLCLF LL YL L GPG A ---- LL I GLV LLA IGLL LY LL Y RR 426
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-447
1.36e-50
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 177.40
E-value: 1.36e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 4 S PAPE S A LK PT LG V FD V VA IT V S A VTP A S s V FV IAPF A IQQ AG TG A FW A FAL AG V LAL MF A WC YAEL GR A HST AGG E Y V Y 83
Cdd:COG0531 2 S RGES S E LK RK LG L FD L VA LG V G A IIG A G - I FV LPGL A AGL AG PA A IL A WLI AG L LAL LV A LS YAEL AS A FPR AGG A Y T Y 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 84 A K R VF G G L A G YATFLTV L AMLLFIPPVL A TGAAT YL NAALGTHFD a QTV AL AIVAFSY LL GILNIRVN A W V TGTCLL L EV 163
Cdd:COG0531 81 A R R AL G P L L G FLAGWAL L LSYVLAVAAV A VAFGG YL SSLFPAGGS - VLI AL VLILLLT LL NLRGVKES A K V NNILTV L KL 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 164 AA LL VIVGL G FGHAQQPASVLLQ P QVV G dggllaiap WAL V IG A VGT A L F SYN GF GGAVL LAE DM K DGGHSVH RA VLW SL 243
Cdd:COG0531 160 LV LL LFIVV G LFAFDPANFTPFL P AGG G --------- LSG V LA A LAL A F F AFT GF EAIAN LAE EA K NPKRNIP RA IIL SL 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 244 AL V VLIE I V p LAAL L I G APSLPAML AS PD P IGYLLNSHGNETLSR L VSA G IF LS VFN A IV A IVIQSA R VIFSSG RD A L wm 323
Cdd:COG0531 231 LI V GVLY I L - VSLA L T G VVPYDELA AS GA P LADAAEAVFGPWGAI L IAL G AL LS LLG A LN A SILGAS R LLYAMA RD G L -- 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 324 pa L NRA F TRI HPR WES P WL A T L FLAIPSA -- A L SFSSNLAE L T S FTVLLIVMV YL I VAL CALFS R VL R R D REH P Y R M P l W 401
Cdd:COG0531 308 -- L PKV F AKV HPR FGT P VN A I L LTGVIAL ll L L LGAASFTA L A S LASVGVLLA YL L VAL AVIVL R RR R P D LPR P F R V P - L 384
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 15596682 402 PL PAL L AVSGAGY LL LN L FLA A sard VM I IVG LLA VSVI LY CT Y GK 447
Cdd:COG0531 385 PL IPI L GILLCLF LL YL L GPG A ---- LL I GLV LLA IGLL LY LL Y RR 426
AA_permease_2
pfam13520 Amino acid permease;
15-423
2.49e-20
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 92.76
E-value: 2.49e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 15 LG VFDVV A ITVSA V tp AS S VFVI AP FAIQQAGTGAF W AFAL A GVLA L MFAWC YAEL GR A HSTA GG E YVY AKRV FG GLAGY 94
Cdd:pfam13520 1 LG LLSAF A LVIGS V -- IG S GIFV AP LVASGGPALIV W GWIA A IIFS L AVGLV YAEL SS A LPRS GG I YVY LENA FG KFVAF 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 95 ATFLTVLAMLLFIPPVL A TG AA T YL NA ALG THFDAQ T ----- V A L AI VAFSYLLG I LNI R VN A W --- VT G TCL LL EVAA L 166
Cdd:pfam13520 79 LAGWSNWFAYVLGLASS A SV AA S YL LS ALG PDLVPT T wltyg I A I AI LIIFAIIN I RGV R ES A K iqn IL G ILK LL LPLI L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 167 LV I V GL GFGHAQQ pasvll QPQVV G DGGLLAIAP W AL V IGAVGTA L F S YN GF GG A VLLA E DM K DG gh S V HR A VLWSLAL V 246
Cdd:pfam13520 159 II I L GL VTADGGG ------ FNLLS G EWHTFFPDG W PG V FAGFLGV L W S FT GF ES A ANVS E EV K KR -- N V PK A IFIGVII V 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 247 VLIE I VPLA A LLIGA P -- SLPAMLASPDPIGY L LNSH G NETLSRL V SAGIF LS VFN A IVAIVIQSA R VIFSSG RD A l WM P 324
Cdd:pfam13520 231 GVLY I LVNI A FFGVV P dd EIALSSGLGQVAAL L FQAV G GKWGAII V VILLA LS LLG A VNTAIVGAS R LLYALA RD G - VL P 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 325 a LN R A F TRIHP r WE SP WL A TLFL AI P S AA L SFSSN L AE ----- L T S FTVLLIVMV YL IVALCA L F srv LR RD R EHPY R M P 399
Cdd:pfam13520 310 - FS R F F AKVNK - FG SP IR A IILT AI L S LI L LLLFL L SP aayna L L S LSAYGYLLS YL LPIIGL L I --- LR KK R PDLG R I P 384
410 420
....*....|....*....|....
gi 15596682 400 LWPLP A LLAVSGAGY L LLN LF LAA 423
Cdd:pfam13520 385 GRWPV A IFGILFSLF L IVA LF FPP 408
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
10-450
4.64e-18
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 86.34
E-value: 4.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 10 ALK PTLGVFDV V A I T V SAVT p A S SV FV IAPFAIQQ AG TG -- A FWAF A LA G VLALMF A WC YAELG RAHSTA GGEY V Y AKR V 87
Cdd:TIGR00911 39 ALK KEITLLSG V G I I V GTII - G S GI FV SPKGVLKN AG SV gl A LIMW A VC G IFSIVG A LV YAELG TTIPKS GGEY N Y ILE V 117
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 88 FG G L AG yat FL TVLAM LL F I P P ---- V L A TGA A T Y LNAALG ----- THFDAQT VA LAI V AFSY L LGI L NIRVNAW V TGTC 158
Cdd:TIGR00911 118 FG P L LA --- FL RLWIE LL V I R P gsqa V N A LNF A I Y ILTPVF pdcev PEWAIRL VA VLC V LLLT L VNC L SVKWATR V QDIF 194
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 159 LLLEVA ALL V I VGL G FGHAQQPASVL L Q P QVVGD G GLLAIAPWA L vig A VGTALFS Y N G FGGAVLLA E DM K DGGHSVHR A 238
Cdd:TIGR00911 195 TACKLL ALL L I IIT G WVQLGKGGVES L N P KNAFE G TETSAGGIV L --- A FYSGIWA Y G G WNYLNFVT E EV K NPYRTLPI A 271
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 239 VLW S LAL V VL I EIVPLA A LLIGAPSL p AM LAS P dpig YLLNSH G NET L --- S RLVS A GIF LS V F NAIVAIVIQ S A R VI F S 315
Cdd:TIGR00911 272 III S MPI V TF I YVLTNI A YFTVLSPE - EL LAS L ---- AVAVDF G ERL L gvm S WAMP A LVG LS C F GSVNGSLFS S S R LF F V 346
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 316 S GR DAL w M P A L N raf TR IH PRWES P WLAT L FLAIPSAALS FS SNLAE L TSFTVLLIVMVYLIVALCA L FS R VL R RDREH P 395
Cdd:TIGR00911 347 G GR EGH - L P S L L --- SM IH VKRLT P LPSL L IVCTLTLLML FS GDIYS L INLISFANWLFNALAVAGL L WL R YK R PEMNR P 422
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 15596682 396 YRM PL W p L P ALLAV S GAGYLL L N L FLAASARD V MI I VG L LA V S V ILYCTYGKLS P 450
Cdd:TIGR00911 423 IKV PL F - F P VFFLL S CLFLII L S L YSPPVGCG V GF I IM L TG V P V YFFGVWWQNK P 476
frlA
PRK11357 amino acid permease;
11-437
1.48e-10
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 62.95
E-value: 1.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 11 L KPT LG VFD V V AI T V s AV T PA S SV FV IAPFAIQQ AGT GAF -- W AF ALA G VLALMFAWC YAEL GR A HSTA G GE YVY A K --- 85
Cdd:PRK11357 6 L QRK LG FWA V L AI A V - GT T VG S GI FV SVGEVAKA AGT PWL tv L AF VIG G LIVIPQMCV YAEL ST A YPEN G AD YVY L K nag 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 86 - R VFGG L A G Y A T F LTVL A ML L F I ppv L A TGAATY L NAALGTH - FDAQTV A LAIVAFSY LL GILNIRVN A WVTGTCLLLEV 163
Cdd:PRK11357 85 s R PLAF L S G W A S F WAND A PS L S I --- M A LAIVSN L GFLTPID p LLGKFI A AGLIIAFM LL HLRSVEGG A AFQTLITIAKI 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 164 AALLVIV GLG FGHAQ qp A SVLLQ P QVVGD G gll A IAPWALVIGAVGTALF SY N G FGGAVLLAEDM K DG G HSVH RA VLW S l 243
Cdd:PRK11357 162 IPFTIVI GLG IFWFK -- A ENFAA P TTTAI G --- A TGSFMALLAGISATSW SY T G MASICYMTGEI K NP G KTMP RA LIG S - 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 244 A L V VL IEIVP LA ALLI G APSLPAMLA S PD PI G yllnshgn ET L SRLVSA G IFLSV F N AI V A IVI ---------- QSA R VI 313
Cdd:PRK11357 236 C L L VL VLYTL LA LVIS G LMPFDKLAN S ET PI S -------- DA L TWIPAL G STAGI F V AI T A MIV ilgslsscvm YQP R LE 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 314 FSSGR D A L WM paln RA F TRI HP RWES P WLATLFLAIPSAALS F S S N L AE L TSF t VL L IVMVYLIVALCALFSRVL R R D RE 393
Cdd:PRK11357 308 YAMAK D N L FF ---- KC F GHV HP KYNT P DVSIILQGALGIFFI F V S D L TS L LGY - FT L VMCFKNTLTFGSIIWCRK R D D YK 382
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 15596682 394 HPY R M P LWP L PAL LA VSGAGY L LLNL F LA A SARD vm I I VGLLAV 437
Cdd:PRK11357 383 PLW R T P AFG L MTT LA IASSLI L VAST F VW A PIPG -- L I CAVIVI 424
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-447
1.36e-50
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 177.40
E-value: 1.36e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 4 S PAPE S A LK PT LG V FD V VA IT V S A VTP A S s V FV IAPF A IQQ AG TG A FW A FAL AG V LAL MF A WC YAEL GR A HST AGG E Y V Y 83
Cdd:COG0531 2 S RGES S E LK RK LG L FD L VA LG V G A IIG A G - I FV LPGL A AGL AG PA A IL A WLI AG L LAL LV A LS YAEL AS A FPR AGG A Y T Y 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 84 A K R VF G G L A G YATFLTV L AMLLFIPPVL A TGAAT YL NAALGTHFD a QTV AL AIVAFSY LL GILNIRVN A W V TGTCLL L EV 163
Cdd:COG0531 81 A R R AL G P L L G FLAGWAL L LSYVLAVAAV A VAFGG YL SSLFPAGGS - VLI AL VLILLLT LL NLRGVKES A K V NNILTV L KL 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 164 AA LL VIVGL G FGHAQQPASVLLQ P QVV G dggllaiap WAL V IG A VGT A L F SYN GF GGAVL LAE DM K DGGHSVH RA VLW SL 243
Cdd:COG0531 160 LV LL LFIVV G LFAFDPANFTPFL P AGG G --------- LSG V LA A LAL A F F AFT GF EAIAN LAE EA K NPKRNIP RA IIL SL 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 244 AL V VLIE I V p LAAL L I G APSLPAML AS PD P IGYLLNSHGNETLSR L VSA G IF LS VFN A IV A IVIQSA R VIFSSG RD A L wm 323
Cdd:COG0531 231 LI V GVLY I L - VSLA L T G VVPYDELA AS GA P LADAAEAVFGPWGAI L IAL G AL LS LLG A LN A SILGAS R LLYAMA RD G L -- 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 324 pa L NRA F TRI HPR WES P WL A T L FLAIPSA -- A L SFSSNLAE L T S FTVLLIVMV YL I VAL CALFS R VL R R D REH P Y R M P l W 401
Cdd:COG0531 308 -- L PKV F AKV HPR FGT P VN A I L LTGVIAL ll L L LGAASFTA L A S LASVGVLLA YL L VAL AVIVL R RR R P D LPR P F R V P - L 384
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 15596682 402 PL PAL L AVSGAGY LL LN L FLA A sard VM I IVG LLA VSVI LY CT Y GK 447
Cdd:COG0531 385 PL IPI L GILLCLF LL YL L GPG A ---- LL I GLV LLA IGLL LY LL Y RR 426
AA_permease_2
pfam13520 Amino acid permease;
15-423
2.49e-20
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 92.76
E-value: 2.49e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 15 LG VFDVV A ITVSA V tp AS S VFVI AP FAIQQAGTGAF W AFAL A GVLA L MFAWC YAEL GR A HSTA GG E YVY AKRV FG GLAGY 94
Cdd:pfam13520 1 LG LLSAF A LVIGS V -- IG S GIFV AP LVASGGPALIV W GWIA A IIFS L AVGLV YAEL SS A LPRS GG I YVY LENA FG KFVAF 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 95 ATFLTVLAMLLFIPPVL A TG AA T YL NA ALG THFDAQ T ----- V A L AI VAFSYLLG I LNI R VN A W --- VT G TCL LL EVAA L 166
Cdd:pfam13520 79 LAGWSNWFAYVLGLASS A SV AA S YL LS ALG PDLVPT T wltyg I A I AI LIIFAIIN I RGV R ES A K iqn IL G ILK LL LPLI L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 167 LV I V GL GFGHAQQ pasvll QPQVV G DGGLLAIAP W AL V IGAVGTA L F S YN GF GG A VLLA E DM K DG gh S V HR A VLWSLAL V 246
Cdd:pfam13520 159 II I L GL VTADGGG ------ FNLLS G EWHTFFPDG W PG V FAGFLGV L W S FT GF ES A ANVS E EV K KR -- N V PK A IFIGVII V 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 247 VLIE I VPLA A LLIGA P -- SLPAMLASPDPIGY L LNSH G NETLSRL V SAGIF LS VFN A IVAIVIQSA R VIFSSG RD A l WM P 324
Cdd:pfam13520 231 GVLY I LVNI A FFGVV P dd EIALSSGLGQVAAL L FQAV G GKWGAII V VILLA LS LLG A VNTAIVGAS R LLYALA RD G - VL P 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 325 a LN R A F TRIHP r WE SP WL A TLFL AI P S AA L SFSSN L AE ----- L T S FTVLLIVMV YL IVALCA L F srv LR RD R EHPY R M P 399
Cdd:pfam13520 310 - FS R F F AKVNK - FG SP IR A IILT AI L S LI L LLLFL L SP aayna L L S LSAYGYLLS YL LPIIGL L I --- LR KK R PDLG R I P 384
410 420
....*....|....*....|....
gi 15596682 400 LWPLP A LLAVSGAGY L LLN LF LAA 423
Cdd:pfam13520 385 GRWPV A IFGILFSLF L IVA LF FPP 408
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
10-450
4.64e-18
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 86.34
E-value: 4.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 10 ALK PTLGVFDV V A I T V SAVT p A S SV FV IAPFAIQQ AG TG -- A FWAF A LA G VLALMF A WC YAELG RAHSTA GGEY V Y AKR V 87
Cdd:TIGR00911 39 ALK KEITLLSG V G I I V GTII - G S GI FV SPKGVLKN AG SV gl A LIMW A VC G IFSIVG A LV YAELG TTIPKS GGEY N Y ILE V 117
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 88 FG G L AG yat FL TVLAM LL F I P P ---- V L A TGA A T Y LNAALG ----- THFDAQT VA LAI V AFSY L LGI L NIRVNAW V TGTC 158
Cdd:TIGR00911 118 FG P L LA --- FL RLWIE LL V I R P gsqa V N A LNF A I Y ILTPVF pdcev PEWAIRL VA VLC V LLLT L VNC L SVKWATR V QDIF 194
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 159 LLLEVA ALL V I VGL G FGHAQQPASVL L Q P QVVGD G GLLAIAPWA L vig A VGTALFS Y N G FGGAVLLA E DM K DGGHSVHR A 238
Cdd:TIGR00911 195 TACKLL ALL L I IIT G WVQLGKGGVES L N P KNAFE G TETSAGGIV L --- A FYSGIWA Y G G WNYLNFVT E EV K NPYRTLPI A 271
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 239 VLW S LAL V VL I EIVPLA A LLIGAPSL p AM LAS P dpig YLLNSH G NET L --- S RLVS A GIF LS V F NAIVAIVIQ S A R VI F S 315
Cdd:TIGR00911 272 III S MPI V TF I YVLTNI A YFTVLSPE - EL LAS L ---- AVAVDF G ERL L gvm S WAMP A LVG LS C F GSVNGSLFS S S R LF F V 346
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 316 S GR DAL w M P A L N raf TR IH PRWES P WLAT L FLAIPSAALS FS SNLAE L TSFTVLLIVMVYLIVALCA L FS R VL R RDREH P 395
Cdd:TIGR00911 347 G GR EGH - L P S L L --- SM IH VKRLT P LPSL L IVCTLTLLML FS GDIYS L INLISFANWLFNALAVAGL L WL R YK R PEMNR P 422
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 15596682 396 YRM PL W p L P ALLAV S GAGYLL L N L FLAASARD V MI I VG L LA V S V ILYCTYGKLS P 450
Cdd:TIGR00911 423 IKV PL F - F P VFFLL S CLFLII L S L YSPPVGCG V GF I IM L TG V P V YFFGVWWQNK P 476
frlA
PRK11357 amino acid permease;
11-437
1.48e-10
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 62.95
E-value: 1.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 11 L KPT LG VFD V V AI T V s AV T PA S SV FV IAPFAIQQ AGT GAF -- W AF ALA G VLALMFAWC YAEL GR A HSTA G GE YVY A K --- 85
Cdd:PRK11357 6 L QRK LG FWA V L AI A V - GT T VG S GI FV SVGEVAKA AGT PWL tv L AF VIG G LIVIPQMCV YAEL ST A YPEN G AD YVY L K nag 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 86 - R VFGG L A G Y A T F LTVL A ML L F I ppv L A TGAATY L NAALGTH - FDAQTV A LAIVAFSY LL GILNIRVN A WVTGTCLLLEV 163
Cdd:PRK11357 85 s R PLAF L S G W A S F WAND A PS L S I --- M A LAIVSN L GFLTPID p LLGKFI A AGLIIAFM LL HLRSVEGG A AFQTLITIAKI 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 164 AALLVIV GLG FGHAQ qp A SVLLQ P QVVGD G gll A IAPWALVIGAVGTALF SY N G FGGAVLLAEDM K DG G HSVH RA VLW S l 243
Cdd:PRK11357 162 IPFTIVI GLG IFWFK -- A ENFAA P TTTAI G --- A TGSFMALLAGISATSW SY T G MASICYMTGEI K NP G KTMP RA LIG S - 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 244 A L V VL IEIVP LA ALLI G APSLPAMLA S PD PI G yllnshgn ET L SRLVSA G IFLSV F N AI V A IVI ---------- QSA R VI 313
Cdd:PRK11357 236 C L L VL VLYTL LA LVIS G LMPFDKLAN S ET PI S -------- DA L TWIPAL G STAGI F V AI T A MIV ilgslsscvm YQP R LE 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 314 FSSGR D A L WM paln RA F TRI HP RWES P WLATLFLAIPSAALS F S S N L AE L TSF t VL L IVMVYLIVALCALFSRVL R R D RE 393
Cdd:PRK11357 308 YAMAK D N L FF ---- KC F GHV HP KYNT P DVSIILQGALGIFFI F V S D L TS L LGY - FT L VMCFKNTLTFGSIIWCRK R D D YK 382
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 15596682 394 HPY R M P LWP L PAL LA VSGAGY L LLNL F LA A SARD vm I I VGLLAV 437
Cdd:PRK11357 383 PLW R T P AFG L MTT LA IASSLI L VAST F VW A PIPG -- L I CAVIVI 424
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
8-386
5.37e-09
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 58.29
E-value: 5.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 8 ES AL K PT L GVF D VV A ITVSAVT p ASSVF V IA - PF A IQQA G TGAFWA F ALA G VL A LMFAW CYAE L G RAHST AG GE Y V Y AKR 86
Cdd:TIGR00906 23 ES KM K RC L TTW D LM A LGIGSTI - GAGIY V LT g EV A RNDS G PAIVLS F LIS G LA A VLSGF CYAE F G ARVPK AG SA Y L Y SYV 101
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 87 VF G G L AGYA T FLTVLAMLLFIPPVL A TGAAT Y LNAA L G --- TH F DAQTV -------------- A LAIVAFSYL L GILNIR 149
Cdd:TIGR00906 102 TV G E L WAFI T GWNLILEYVIGTAAV A RSWSA Y FDEL L N kqi GQ F RRTYF klnydglaeypdff A VCLILLLAV L LSFGVK 181
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 150 VN AWV TGTCLLLEVAA LL VIVGL GF GH A Q qpasv LLQPQVVGDG G LLAIA P WAL -- V IGAVG T AL F SYN GF GGAVLLA E D 227
Cdd:TIGR00906 182 ES AWV NKIFTAINILV LL FVIIA GF TK A D ----- VANWSITEEK G AGGFM P YGF tg V LSGAA T CF F AFI GF DAIATTG E E 256
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 228 M K DGGHSVHRAVLW SL ALVVLIEIVPL AAL LI gap SL P AM L AS PD - P IGYLLNSH G NETLSRL V SA G IFLSVFNAIVAIV 306
Cdd:TIGR00906 257 V K NPQRAIPIGIVT SL LVCFVAYFLMS AAL TL --- MM P YY L LD PD a P FPVAFEYV G WDPAKYI V AV G ALCGMSTSLLGGM 333
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 307 IQSA RVI FSSG RD A L wmpa L NRAFTR I HPRWES P WL AT LFLAIPS A ALS F SSN L AE L TSFTVLLIVMV Y LI VA L C A L FS R 386
Cdd:TIGR00906 334 FPLP RVI YAMA RD G L ---- L FKWLAQ I NSKTKT P IN AT VVSGAIA A LMA F LFD L KA L VDLLSIGTLLA Y SL VA A C V L IL R 409
AA_permease
pfam00324 Amino acid permease;
34-426
5.57e-08
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 55.02
E-value: 5.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 34 V FV IAPFAIQ QAG - T GA FWAFALA GV LALMFAWCYA E LGRAHSTA GG E Y V YA K R VF G GLA G Y AT FLTVLAMLLFIPPVLA 112
Cdd:pfam00324 15 L FV GSGSVLG QAG p A GA LLGYLIS GV VIFLVMLSLG E ISTNGPVS GG F Y T YA S R FL G PSL G F AT GWNYWLSWITVLALEL 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 113 T G A ATYLNAALGTH f D AQTVALAIVA F SY LL G I L N IRVNA W VTGT ----- CLLLEVAALLV IVG LGFGHAQQ P ASVLLQP 187
Cdd:pfam00324 95 T A A SILIQFWELVP - D IPYLWVWGAV F LV LL T I I N LVGVK W YGEA efwfa LIKIIAIIGFI IVG IILLSGGN P NDGAIFR 173
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 188 QVVGD GG LLAIA P WAL -- V I GAVGT A L F SYN G FGGAVLL A EDM K DGGH S VHR A V L WSLALVVLIE I VP L A A LLIGA P --- 262
Cdd:pfam00324 174 YLGDN GG KNNFP P GFG kg F I SVFVI A F F AFT G IELVGIA A GEV K NPEK S IPK A I L QVIWRITIFY I LS L L A IGLLV P wnd 253
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 263 -- S L PAMLASPD P IGYLLNSH G NET L SR L VS A G I FLSVFN A IVAIVIQSA R VIF S SG RD A L w M P alnr A F TRIHPRWES P 340
Cdd:pfam00324 254 pg L L NDSASAAS P FVIFFKFL G ISG L AP L IN A V I LTAALS A ANSSLYSGS R MLY S LA RD G L - A P ---- K F LKKVDKRGV P 328
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 341 WL A T L FLAIP S AALSFSSN L AELTS F TV LL ------ IVM V YLIVA L CA L FS R VL ----- R RDR E H P YRM PL W PL PAL L AV 409
Cdd:pfam00324 329 LR A I L VSMVI S LLALLLAS L NPAIV F NF LL aisgls GLI V WGLIS L SH L RF R KA fkyqg R SID E L P FKA PL G PL GVI L GL 408
410
....*....|....*..
gi 15596682 410 SGAGYL L LNL FL A A SAR 426
Cdd:pfam00324 409 AAIIII L IIQ FL Y A FLP 425
PRK10644
PRK10644 arginine/agmatine antiporter;
21-148
2.80e-03
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain]
Cd Length: 445
Bit Score: 39.77
E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 21 V AIT V SAVTPA S S VF VI a P FAIQQA G TG A FWAFALAGVL AL MFAWC YA ELGRAHSTA GG E Y V YA K R V FG GLA GY A T - F L T 99
Cdd:PRK10644 15 V TLM V AGNIMG S G VF LL - P ANLAST G GI A IYGWLVTIIG AL GLSMV YA KMSSLDPSP GG S Y A YA R R C FG PFL GY Q T n V L Y 93
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 15596682 100 V LA MLL -- FIPP V LAT G AAT Y LNAA L G thf D AQTVALAI V AFSYLLGI LNI 148
Cdd:PRK10644 94 W LA CWI gn IAMV V IGV G YLS Y FFPI L K --- D PLVLTITC V VVLWIFVL LNI 141
PRK10197
PRK10197 GABA permease;
31-440
4.97e-03
GABA permease;
Pssm-ID: 182297
Cd Length: 446
Bit Score: 39.22
E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 31 AS S V FV IAPF AI QQ AG TGAFW A FAL AG V L AL M FAWCY AE LGR A HSTA G GEYV YA KRVF G GL AGY ATFLTVLAMLLFIP P V 110
Cdd:PRK10197 9 GA S L FV GSSV AI AE AG PAVLL A YLF AG L L VV M IMRML AE MAV A TPDT G SFST YA DKAI G RW AGY TIGWLYWWFWVLVI P L 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 111 L A TG AA TY L NA --- ALGTHFDAQTVA LA IVA f S Y LL GIL N IRVNAWVTGT C LLLEVA A LLVIVGLGFGHAQQP A S V LLQP 187
Cdd:PRK10197 89 E A NI AA MI L HS wvp GIPIWLFSLVIT LA LTG - S N LL SVK N YGEFEFWLAL C KVIAIL A FIFLGAVAISGFYPY A E V SGIS 167
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 188 QVVGD GG LLAIA p WAL V IG A VGTAL FS YN G FGGAVLL A EDMKDGGHSVH RA --- V L W SLALVV L IE I VPLA AL L - IGA P S 263
Cdd:PRK10197 168 RLWDS GG FMPNG - FGA V LS A MLITM FS FM G AEIVTIA A AESDTPEKHIV RA tns V I W RISIFY L CS I FVVV AL I p WNM P G 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 264 L P A MLASPDPIGY L LNS H GNETLSRL vsag I F LSV FNAIVAIVIQSA R VIF S SG R DALWMPALNRA ftrih P R WES P WL A 343
Cdd:PRK10197 247 L K A VGSYRSVLEL L NIP H AKLIMDCV ---- I L LSV TSCLNSALYTAS R MLY S LS R RGDAPAVMGKI ----- N R SKT P YV A 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 344 T L f L AIPS A A L SFSS N LAELTSFTVL LI ------- VM VYL IV A LCA L FS R VLR R DREHPY R MPL W PL P A L -- L AVSGAGY 414
Cdd:PRK10197 318 V L - L STGA A F L TVVV N YYAPAKVFKF LI dssgaia LL VYL VI A VSQ L RM R KIL R AEGSEI R LRM W LY P W L tw L VIGFITF 396
410 420
....*....|....*....|....*.
gi 15596682 415 L L LNLFLAASARDVM I IV GLLA VSV I 440
Cdd:PRK10197 397 V L VVMLFRPAQQLEV I ST GLLA IGI I 422
PRK11021
PRK11021 putative transporter; Provisional
34-204
5.14e-03
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 39.12
E-value: 5.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 34 VF VIAPF A IQQ AG TGAF WA FA L AGV L ALMF A WCY A E LGR AHST AGG EYVYAKRV FG GLA G YA T --- FL T V LAML L fip P V 110
Cdd:PRK11021 19 VF AVPAL A ALV AG NNSL WA WP L LIL L IFPI A IVF A R LGR HFPH AGG PAHFVGMA FG PRL G RV T gwl FL S V IPVG L --- P A 95
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 111 LATG AA TYLN A AL G THFDAQTV A - L AIV A FSY LL GILNIRVN A WVTGTCL LL E VA ALLV I VGL G - FGH A QQ P ASVLLQPQ 188
Cdd:PRK11021 96 ALQI AA GFGQ A LF G WSSWQLLL A e L LTL A LLW LL NLRGASSS A NLQTVIA LL I VA LVVA I WWA G d IKP A DI P FPAPGSIE 175
170
....*....|....*.
gi 15596682 189 VV G DGGL L AIAP W AL V 204
Cdd:PRK11021 176 WS G LFAA L GVMF W CF V 191
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
213-380
7.98e-03
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 38.57
E-value: 7.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 213 F S YN G FG G AVLL AE DMKDGGHSVH RA VLWSL A LVVLIEIVPLAA L LIGAPSLPAMLA S PD -- PI GYLL - N SH GN ETLSRL 289
Cdd:TIGR00907 228 W S MT G YD G TAHM AE EIENPEVVGP RA IIGAV A IGIVTGFCFNIV L FFSMGDIDSLIS S TT gq PI AQIF y N AL GN KAGAIF 307
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596682 290 VSAG I FLSV F NAIVAIVIQSA R V I FSSG RD AL w M P a LNRAFT R IH PR WES P WL A TLF laip SA ALSFSSN L AE L T S F T VL 369
Cdd:TIGR00907 308 LLCL I LVTS F FCAITCMTANS R M I YAFS RD GG - L P - FSPLWS R VN PR TQV P LN A VWL ---- SA VWIILIG L LG L G S S T AF 381
170
....*....|.
gi 15596682 370 LIVMVYLI VAL 380
Cdd:TIGR00907 382 QAIFSVCT VAL 392
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
