NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15597186|ref|NP_250680|]
View 

peptidase [Pseudomonas aeruginosa PAO1]

Protein Classification

alpha/beta hydrolase family protein( domain architecture ID 11445445)

alpha/beta hydrolase family protein catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

CATH:  3.40.50.1820
EC:  3.-.-.-
Gene Ontology:  GO:0016787
PubMed:  12369917

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
359-602 1.29e-45

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


:

Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 161.34  E-value: 1.29e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 359 NGENGHGFFYPPRNARRRVdprrpppLLVWLHGGPTSMhSPAFDAGLQFWTQRGFAVAALNYRGssgYGRAyrqrlRGQW 438
Cdd:COG1506   6 DGTTLPGWLYLPADGKKYP-------VVVYVHGGPGSR-DDSFLPLAQALASRGYAVLAPDYRG---YGES-----AGDW 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 439 GRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALRALACL-DGLRGGASLYGVSDPLALARCTHkfegDYLDWLI 517
Cdd:COG1506  70 GGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHpDRFKAAVALAGVSDLRSYYGTTR----EYTERLM 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 518 GDPQRQRRRYLVRSPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRVECHRYPQERHGFRQPANRaHALLA 597
Cdd:COG1506 146 GGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGAGAP-DYLER 224

                ....*
gi 15597186 598 EWRFY 602
Cdd:COG1506 225 ILDFL 229
 
Name Accession Description Interval E-value
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
359-602 1.29e-45

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 161.34  E-value: 1.29e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 359 NGENGHGFFYPPRNARRRVdprrpppLLVWLHGGPTSMhSPAFDAGLQFWTQRGFAVAALNYRGssgYGRAyrqrlRGQW 438
Cdd:COG1506   6 DGTTLPGWLYLPADGKKYP-------VVVYVHGGPGSR-DDSFLPLAQALASRGYAVLAPDYRG---YGES-----AGDW 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 439 GRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALRALACL-DGLRGGASLYGVSDPLALARCTHkfegDYLDWLI 517
Cdd:COG1506  70 GGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHpDRFKAAVALAGVSDLRSYYGTTR----EYTERLM 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 518 GDPQRQRRRYLVRSPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRVECHRYPQERHGFRQPANRaHALLA 597
Cdd:COG1506 146 GGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGAGAP-DYLER 224

                ....*
gi 15597186 598 EWRFY 602
Cdd:COG1506 225 ILDFL 229
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
399-606 1.76e-40

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 146.61  E-value: 1.76e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   399 PAFDAGLQFWTQRGFAVAALNYRGSSGYGRAYRQRLRGQWGRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALR 478
Cdd:pfam00326   1 PSFSWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGYLTGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   479 ALACLDGL-RGGASLYGVSDPLAL-ARCTHKFEGDYLDWliGDPQRQRRRYLVRSPV--LQVGRIRAPVVFFQGGLDAVV 554
Cdd:pfam00326  81 ALNQRPDLfKAAVAHVPVVDWLAYmSDTSLPFTERYMEW--GNPWDNEEGYDYLSPYspADNVKVYPPLLLIHGLLDDRV 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 15597186   555 VPEQTEAMVAGLRRSGVRVECHRYPQERHGFRQPANRAHALLAEWRFYLGLL 606
Cdd:pfam00326 159 PPWQSLKLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEYL 210
PRK10566 PRK10566
esterase; Provisional
431-494 2.20e-04

esterase; Provisional


Pssm-ID: 182555 [Multi-domain]  Cd Length: 249  Bit Score: 43.05  E-value: 2.20e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15597186  431 RQRLRGQWGRL-----ELRDIEAALAQldaEGWIDRARVFVRGASAGGYSALRALACLDGLRGGASLYG 494
Cdd:PRK10566  74 ARRLNHFWQILlqnmqEFPTLRAAIRE---EGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139
 
Name Accession Description Interval E-value
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
359-602 1.29e-45

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 161.34  E-value: 1.29e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 359 NGENGHGFFYPPRNARRRVdprrpppLLVWLHGGPTSMhSPAFDAGLQFWTQRGFAVAALNYRGssgYGRAyrqrlRGQW 438
Cdd:COG1506   6 DGTTLPGWLYLPADGKKYP-------VVVYVHGGPGSR-DDSFLPLAQALASRGYAVLAPDYRG---YGES-----AGDW 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 439 GRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALRALACL-DGLRGGASLYGVSDPLALARCTHkfegDYLDWLI 517
Cdd:COG1506  70 GGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHpDRFKAAVALAGVSDLRSYYGTTR----EYTERLM 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 518 GDPQRQRRRYLVRSPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRVECHRYPQERHGFRQPANRaHALLA 597
Cdd:COG1506 146 GGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGAGAP-DYLER 224

                ....*
gi 15597186 598 EWRFY 602
Cdd:COG1506 225 ILDFL 229
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
399-606 1.76e-40

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 146.61  E-value: 1.76e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   399 PAFDAGLQFWTQRGFAVAALNYRGSSGYGRAYRQRLRGQWGRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALR 478
Cdd:pfam00326   1 PSFSWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGYLTGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   479 ALACLDGL-RGGASLYGVSDPLAL-ARCTHKFEGDYLDWliGDPQRQRRRYLVRSPV--LQVGRIRAPVVFFQGGLDAVV 554
Cdd:pfam00326  81 ALNQRPDLfKAAVAHVPVVDWLAYmSDTSLPFTERYMEW--GNPWDNEEGYDYLSPYspADNVKVYPPLLLIHGLLDDRV 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 15597186   555 VPEQTEAMVAGLRRSGVRVECHRYPQERHGFRQPANRAHALLAEWRFYLGLL 606
Cdd:pfam00326 159 PPWQSLKLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEYL 210
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
410-599 3.55e-15

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 75.00  E-value: 3.55e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 410 QRGFAVAALNY---RGSSGYGRAYRQRLRGQWGRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALRALACLDGL 486
Cdd:COG0412  54 AAGYVVLAPDLygrGGPGDDPDEARALMGALDPELLAADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPDL 133
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 487 RGGASLYGvsdplalarcthkfegdyldWLIGDPqrqrrrylvrsPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGL 566
Cdd:COG0412 134 AAAVSFYG--------------------GLPADD-----------LLDLAARIKAPVLLLYGEKDPLVPPEQVAALEAAL 182
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 15597186 567 RRSGVRVECHRYPQERHGFRQP---------ANRAHALLAEW 599
Cdd:COG0412 183 AAAGVDVELHVYPGAGHGFTNPgrprydpaaAEDAWQRTLAF 224
Aes COG0657
Acetyl esterase/lipase [Lipid transport and metabolism];
385-599 1.43e-10

Acetyl esterase/lipase [Lipid transport and metabolism];


Pssm-ID: 440422 [Multi-domain]  Cd Length: 207  Bit Score: 61.04  E-value: 1.43e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 385 LLVWLHGGPTSMHSPAFDAGLQFW--TQRGFAVAALNYRgssgygRAYRQRLRGQwgrleLRDIEAALAQL--DAEGW-I 459
Cdd:COG0657  15 VVVYFHGGGWVSGSKDTHDPLARRlaARAGAAVVSVDYR------LAPEHPFPAA-----LEDAYAALRWLraNAAELgI 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 460 DRARVFVRGASAGGYSALrALACLDGLRGG------ASLYGVSDPLAlarcthkfegdyldwligdpqrqrrrylvrSPV 533
Cdd:COG0657  84 DPDRIAVAGDSAGGHLAA-ALALRARDRGGprpaaqVLIYPVLDLTA------------------------------SPL 132
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15597186 534 LQVGRIRAPVVFFQGGLDAVVvpEQTEAMVAGLRRSGVRVECHRYPQERHGF-----RQPANRAHALLAEW 599
Cdd:COG0657 133 RADLAGLPPTLIVTGEADPLV--DESEALAAALRAAGVPVELHVYPGGGHGFgllagLPEARAALAEIAAF 201
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
386-599 1.88e-10

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 61.17  E-value: 1.88e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 386 LVWLHGGptSMHSPAFDAGLQFWTQRGFAVAALNYRGssgYGRAyrQRLRGQWGRLE--LRDIEAALAQLDAEGwidRAR 463
Cdd:COG2267  31 VVLVHGL--GEHSGRYAELAEALAAAGYAVLAFDLRG---HGRS--DGPRGHVDSFDdyVDDLRAALDALRARP---GLP 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 464 VFVRGASAGGYSALRALAcldglRGGASLYGV--SDPLALArcthkfegdylDWLIGDPQRQRRRYLVRSpvlQVGRIRA 541
Cdd:COG2267 101 VVLLGHSMGGLIALLYAA-----RYPDRVAGLvlLAPAYRA-----------DPLLGPSARWLRALRLAE---ALARIDV 161
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 542 PVVFFQGGLDAVVVPEQTEAMVAGLRRsgvRVECHRYPQERHGFRQPANRAHAL--LAEW 599
Cdd:COG2267 162 PVLVLHGGADRVVPPEAARRLAARLSP---DVELVLLPGARHELLNEPAREEVLaaILAW 218
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
387-583 3.92e-07

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 51.48  E-value: 3.92e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 387 VWLHG---GPTSMHSPAfdaglQFWTQRGFAVAALNYRGssgYGRAYRQRLRGQWGRLeLRDIEAALAQLDAEGwidrAR 463
Cdd:COG1647  19 LLLHGftgSPAEMRPLA-----EALAKAGYTVYAPRLPG---HGTSPEDLLKTTWEDW-LEDVEEAYEILKAGY----DK 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 464 VFVRGASAGGYSALRALACLDGLRGGASL---YGVSDPLALARCTHKFEGDYLDWL---IGDPQRQRRRY---------- 527
Cdd:COG1647  86 VIVIGLSMGGLLALLLAARYPDVAGLVLLspaLKIDDPSAPLLPLLKYLARSLRGIgsdIEDPEVAEYAYdrtplralae 165
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15597186 528 ---LVRSPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGLrrSGVRVECHRYPQERH 583
Cdd:COG1647 166 lqrLIREVRRDLPKITAPTLIIQSRKDEVVPPESARYIYERL--GSPDKELVWLEDSGH 222
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
406-599 4.98e-07

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 51.45  E-value: 4.98e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 406 QFWTQRGFAVAALNYRG---SSGYGRayrqrlrgQWGRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALRALAC 482
Cdd:COG1073  58 QRLAELGFNVLAFDYRGygeSEGEPR--------EEGSPERRDARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAAT 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 483 LDGLRGGASLYGVSDPLALARC-THKFEGDYLDWLIGDPqRQRRRYLVR---SPVLQVGRIRAPVVFFQGGLDAVVVPEQ 558
Cdd:COG1073 130 DPRVKAVILDSPFTSLEDLAAQrAKEARGAYLPGVPYLP-NVRLASLLNdefDPLAKIEKISRPLLFIHGEKDEAVPFYM 208
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 15597186 559 TEAMVAglrRSGVRVECHRYPQERH--GFRQPANRAHALLAEW 599
Cdd:COG1073 209 SEDLYE---AAAEPKELLIVPGAGHvdLYDRPEEEYFDKLAEF 248
COG4188 COG4188
Predicted dienelactone hydrolase [General function prediction only];
385-556 9.25e-07

Predicted dienelactone hydrolase [General function prediction only];


Pssm-ID: 443342 [Multi-domain]  Cd Length: 326  Bit Score: 51.26  E-value: 9.25e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 385 LLVWLHGGPTSMHSPAFDAglQFWTQRGFAVAALNYRGSSGYGR-AYRQRLRGQWGRLEL----RDIEAALAQLDAE--- 456
Cdd:COG4188  64 LVVLSHGLGGSREGYAYLA--EHLASHGYVVAAPDHPGSNAADLsAALDGLADALDPEELwerpLDLSFVLDQLLALnks 141
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 457 -----GWIDRARVFVRGASAGGYSALrALAcldglrgGAslyGVSDPLALARCthkfeGDYLDWLIGDPQRQRRRYLVRS 531
Cdd:COG4188 142 dpplaGRLDLDRIGVIGHSLGGYTAL-ALA-------GA---RLDFAALRQYC-----GKNPDLQCRALDLPRLAYDLRD 205
                       170       180       190
                ....*....|....*....|....*....|...
gi 15597186 532 PvlqvgRIRA--------PVVFFQGGLDAVVVP 556
Cdd:COG4188 206 P-----RIKAvvalapggSGLFGEEGLAAITIP 233
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
385-583 2.29e-06

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 49.14  E-value: 2.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   385 LLVWLHGGptSMHSPAFDAGLQFWTQRGFAVAALNYRgssGYGRAyrQRLRGQWGRLE--LRDIEAALAQLDAEGwiDRA 462
Cdd:pfam12146   6 VVVLVHGL--GEHSGRYAHLADALAAQGFAVYAYDHR---GHGRS--DGKRGHVPSFDdyVDDLDTFVDKIREEH--PGL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   463 RVFVRGASAGGYSALRALA----CLDGLRGGASLYGVSDPLA--LARCTHKFEGDYL-----------DWLIGDPQRQRR 525
Cdd:pfam12146  77 PLFLLGHSMGGLIAALYALrypdKVDGLILSAPALKIKPYLAppILKLLAKLLGKLFprlrvpnnllpDSLSRDPEVVAA 156
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15597186   526 ryLVRSP---------------------VLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRVecHRYPQERH 583
Cdd:pfam12146 157 --YAADPlvhggisartlyelldagerlLRRAAAITVPLLLLHGGADRVVDPAGSREFYERAGSTDKTL--KLYPGLYH 231
COG4099 COG4099
Predicted peptidase [General function prediction only];
385-584 1.41e-05

Predicted peptidase [General function prediction only];


Pssm-ID: 443275 [Multi-domain]  Cd Length: 235  Bit Score: 46.88  E-value: 1.41e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 385 LLVWLHGG--------PTSMHSPAFDAGLQFWTQRGFAVAALNYRGSSGYGrayrqrlrgqwGRLELRDIEAALAQLDAE 456
Cdd:COG4099  51 LVLFLHGAgergtdneKQLTHGAPKFINPENQAKFPAIVLAPQCPEDDYWS-----------DTKALDAVLALLDDLIAE 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 457 GWIDRARVFVRGASAGGYSALR-ALACLDGLRGGASLYGVSDPLALARCTHKfegdyldwligdpqrqrrrylvrspvlq 535
Cdd:COG4099 120 YRIDPDRIYLTGLSMGGYGTWDlAARYPDLFAAAVPICGGGDPANAANLKKV---------------------------- 171
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 15597186 536 vgriraPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRVECHRYPQERHG 584
Cdd:COG4099 172 ------PVWIFHGAKDDVVPVEESRAMVEALKAAGADVKYTEYPGVGHN 214
BD-FAE pfam20434
BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, ...
385-566 3.03e-05

BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, previously known as bifunctional carbohydrate esterase (CE)), which is active on complex natural xylans and was identified as the basis of a monophyletic clade gathering all homologs identified in PULs (polysaccharide utilization loci) predicted to act on xylan. It adopts an alpha-beta-hydrolase fold with the catalytic triad Ser-Asp-His. This new family of proteins is a new candidate for biomass processing due to its capacity to remove ferulic acid and acetic acid from natural corn and birchwood xylan substrates.


Pssm-ID: 466583 [Multi-domain]  Cd Length: 215  Bit Score: 45.63  E-value: 3.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   385 LLVWLHGG---------PTSMHSPAFDAGLQfwtqRGFAVAALNYRgSSGYGRAYRQrlrgqwgrleLRDIEAALAQLD- 454
Cdd:pfam20434  15 VVIWIHGGgwnsgdkeaDMGFMTNTVKALLK----AGYAVASINYR-LSTDAKFPAQ----------IQDVKAAIRFLRa 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   455 -AEGW-IDRARVFVRGASAGGYsalraLACLDGLRGGASL-------------------------YGVSDPLALARC-TH 506
Cdd:pfam20434  80 nAAKYgIDTNKIALMGFSAGGH-----LALLAGLSNNNKEfegnvgdytpesskesfkvnavvdfYGPTDLLDMDSCgTH 154
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15597186   507 KFEGDYLDWLIGDPQRQRR-RYLVRSPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGL 566
Cdd:pfam20434 155 NDAKSPETLLLGAPPLENPdLAKSASPITYVDKNDPPFLIIHGDKDPLVPYCQSVLLHEKL 215
Abhydrolase_3 pfam07859
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
445-585 6.95e-05

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 400284 [Multi-domain]  Cd Length: 208  Bit Score: 44.12  E-value: 6.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   445 DIEAA---LAQLDAEGWIDRARVFVRGASAGGY----SALRALAC-LDGLRGGASLYGVSDPLAL--ARCTHKFEGDYL- 513
Cdd:pfam07859  51 DAYAAlrwLAEQAAELGADPSRIAVAGDSAGGNlaaaVALRARDEgLPKPAGQVLIYPGTDLRTEspSYLAREFADGPLl 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   514 ---------DWLIGDPQRQRRRY--LVRSPVLQVgrirAPVVFFQGGLDAVVvpEQTEAMVAGLRRSGVRVECHRYPQER 582
Cdd:pfam07859 131 traamdwfwRLYLPGADRDDPLAspLFASDLSGL----PPALVVVAEFDPLR--DEGEAYAERLRAAGVPVELIEYPGMP 204

                  ...
gi 15597186   583 HGF 585
Cdd:pfam07859 205 HGF 207
PRK10566 PRK10566
esterase; Provisional
431-494 2.20e-04

esterase; Provisional


Pssm-ID: 182555 [Multi-domain]  Cd Length: 249  Bit Score: 43.05  E-value: 2.20e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15597186  431 RQRLRGQWGRL-----ELRDIEAALAQldaEGWIDRARVFVRGASAGGYSALRALACLDGLRGGASLYG 494
Cdd:PRK10566  74 ARRLNHFWQILlqnmqEFPTLRAAIRE---EGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139
YpfH COG0400
Predicted esterase [General function prediction only];
385-599 1.83e-03

Predicted esterase [General function prediction only];


Pssm-ID: 440169 [Multi-domain]  Cd Length: 200  Bit Score: 39.89  E-value: 1.83e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 385 LLVWLHGG---PTSMHSPAfdaglQFWTQRGFAVAALnyRGSSGYGRAYRQ--RLRGQWGRLELRDIEAALAQLDA---- 455
Cdd:COG0400   7 LVVLLHGYggdEEDLLPLA-----PELALPGAAVLAP--RAPVPEGPGGRAwfDLSFLEGREDEEGLAAAAEALAAfide 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 456 ---EGWIDRARVFVRGASAGGYSALRAlacldGLRGGASLYGVsdpLALArcthkfeGdyldWLIGDPQRQRRRYLVRSP 532
Cdd:COG0400  80 leaRYGIDPERIVLAGFSQGAAMALSL-----ALRRPELLAGV---VALS-------G----YLPGEEALPAPEAALAGT 140
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15597186 533 vlqvgriraPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRVECHRYPQErHGFRQP-ANRAHALLAEW 599
Cdd:COG0400 141 ---------PVFLAHGTQDPVIPVERAREAAEALEAAGADVTYREYPGG-HEISPEeLADARAWLAER 198
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
386-573 2.55e-03

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 39.60  E-value: 2.55e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 386 LVWLHGGPTSMHSpaFDAGLQFWtQRGFAVAALNYRGssgYGRAYRQRLRGQWGRLeLRDIEAALAQLDAEgwidraRVF 465
Cdd:COG0596  26 VVLLHGLPGSSYE--WRPLIPAL-AAGYRVIAPDLRG---HGRSDKPAGGYTLDDL-ADDLAALLDALGLE------RVV 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 466 VRGASAGGYSALRALA--------------CLDGLRGGASLYGVSDPLALARCTHKFEGDYLDWLigdpqrqrrrylvrs 531
Cdd:COG0596  93 LVGHSMGGMVALELAArhpervaglvlvdeVLAALAEPLRRPGLAPEALAALLRALARTDLRERL--------------- 157
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 15597186 532 pvlqvGRIRAPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRV 573
Cdd:COG0596 158 -----ARITVPTLVIWGEKDPIVPPALARRLAELLPNAELVV 194
DLH pfam01738
Dienelactone hydrolase family;
427-585 3.16e-03

Dienelactone hydrolase family;


Pssm-ID: 396343 [Multi-domain]  Cd Length: 213  Bit Score: 39.26  E-value: 3.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186   427 GRAYRQRLRGQWGRLELRDIEAALAQLDAEGWIDRARVFVRGASAGGYSALRALACLDGLRGGASLYGVSDPlalarcth 506
Cdd:pfam01738  61 ARAMFELVSKRVMEKVLDDLEAAVNYLKSQPEVSPKKVGVVGYCMGGALAVLLAAKGPLVDAAVGFYGVGPE-------- 132
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15597186   507 kfegdyldwligdpqrqrrrylvrSPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGLRRSGVRVECHRYPQERHGF 585
Cdd:pfam01738 133 ------------------------PPLIEAPDIKAPILFHFGEEDHFVPADSRELIEEALKAANVDHQIHSYPGAGHAF 187
LpqC COG3509
Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and ...
385-482 4.34e-03

Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and metabolism];


Pssm-ID: 442732 [Multi-domain]  Cd Length: 284  Bit Score: 39.60  E-value: 4.34e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597186 385 LLVWLHGGPTSMhsPAFDAGLQF---WTQRGFAVAALN-YRGSSGYGRAYRQRLRGQWGRLELRDIEAALAQLDAEGWID 460
Cdd:COG3509  55 LVVALHGCGGSA--ADFAAGTGLnalADREGFIVVYPEgTGRAPGRCWNWFDGRDQRRGRDDVAFIAALVDDLAARYGID 132
                        90       100
                ....*....|....*....|..
gi 15597186 461 RARVFVRGASAGGYSALRaLAC 482
Cdd:COG3509 133 PKRVYVTGLSAGGAMAYR-LAC 153
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH