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Conserved domains on  [gi|15597806|ref|NP_251300|]
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hypothetical protein PA2610 [Pseudomonas aeruginosa PAO1]

Protein Classification

glutathione S-transferase family protein( domain architecture ID 11418207)

glutathione S-transferase family protein similar to Saccharomyces cerevisiae glutathione S-transferase omega-like proteins and Escherichia coli glutathionyl-hydroquinone reductase

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ECM4 COG0435
Glutathionyl-hydroquinone reductase [Energy production and conversion];
1-317 0e+00

Glutathionyl-hydroquinone reductase [Energy production and conversion];


:

Pssm-ID: 440204 [Multi-domain]  Cd Length: 321  Bit Score: 626.39  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806   1 MGQLIDGRWHDQWYDT-QKDGRFQRENAQRRHWL---GEPAFPAEGGRYHLYVSLACPWAHRTLIVRKLKGLESLVDVSV 76
Cdd:COG0435   1 MGLLVDGKWHDDWYDTkDTGGRFVRQESQFRNWItadGSGGFPAEAGRYHLYVSLACPWAHRTLIFRALKGLEDAISVSV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806  77 VSWLMRENGWTFDPAHGSTGDRLDGLAFLHQRYTRDDPHYSGRVTVPLLWDKQAQKIVNNESADIVRIFNSAFDAIGANA 156
Cdd:COG0435  81 VHPLMLEDGWTFSPDPGATPDPLNGARYLHELYTKADPDYTGRVTVPVLWDKQTGTIVNNESAEIIRMLNSAFDGLAGND 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 157 LDFYPEPLREEIERLNGRIYPAVNNGVYRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLV 236
Cdd:COG0435 161 LDLYPEALREEIDALNDRIYDTVNNGVYRAGFATTQEAYEEAVDELFDALDWLEERLSDQRYLCGDRLTEADWRLFTTLV 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 237 RFDAVYHGHFKCNLRRIEDYPNLSGWLRELYQRPGIGETVDFEHIKGHYYASHRTINPTGIVPLGPRLDLARAPGRERLP 316
Cdd:COG0435 241 RFDAVYHGHFKCNRRRIADYPNLWGYLRDLYQLPGVAETVDFDHIKRHYYGSHPTINPTGIVPLGPDLDLDAPHDRDRLG 320

                .
gi 15597806 317 G 317
Cdd:COG0435 321 G 321
 
Name Accession Description Interval E-value
ECM4 COG0435
Glutathionyl-hydroquinone reductase [Energy production and conversion];
1-317 0e+00

Glutathionyl-hydroquinone reductase [Energy production and conversion];


Pssm-ID: 440204 [Multi-domain]  Cd Length: 321  Bit Score: 626.39  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806   1 MGQLIDGRWHDQWYDT-QKDGRFQRENAQRRHWL---GEPAFPAEGGRYHLYVSLACPWAHRTLIVRKLKGLESLVDVSV 76
Cdd:COG0435   1 MGLLVDGKWHDDWYDTkDTGGRFVRQESQFRNWItadGSGGFPAEAGRYHLYVSLACPWAHRTLIFRALKGLEDAISVSV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806  77 VSWLMRENGWTFDPAHGSTGDRLDGLAFLHQRYTRDDPHYSGRVTVPLLWDKQAQKIVNNESADIVRIFNSAFDAIGANA 156
Cdd:COG0435  81 VHPLMLEDGWTFSPDPGATPDPLNGARYLHELYTKADPDYTGRVTVPVLWDKQTGTIVNNESAEIIRMLNSAFDGLAGND 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 157 LDFYPEPLREEIERLNGRIYPAVNNGVYRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLV 236
Cdd:COG0435 161 LDLYPEALREEIDALNDRIYDTVNNGVYRAGFATTQEAYEEAVDELFDALDWLEERLSDQRYLCGDRLTEADWRLFTTLV 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 237 RFDAVYHGHFKCNLRRIEDYPNLSGWLRELYQRPGIGETVDFEHIKGHYYASHRTINPTGIVPLGPRLDLARAPGRERLP 316
Cdd:COG0435 241 RFDAVYHGHFKCNRRRIADYPNLWGYLRDLYQLPGVAETVDFDHIKRHYYGSHPTINPTGIVPLGPDLDLDAPHDRDRLG 320

                .
gi 15597806 317 G 317
Cdd:COG0435 321 G 321
GST_C_Omega_like cd03190
C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione ...
161-302 3.14e-86

C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae Omega-like subfamily; composed of three Saccharomyces cerevisiae GST omega-like (Gto) proteins, Gto1p, Gto2p (also known as Extracellular mutant protein 4 or ECM4p), and Gto3p, as well as similar uncharacterized proteins from fungi and bacteria. The three Saccharomyces cerevisiae Gto proteins are omega-class GSTs with low or no GST activity against standard substrates, but have glutaredoxin/thiol oxidoreductase and dehydroascorbate reductase activity through a single cysteine residue in the active site. Gto1p is located in the peroxisomes while Gto2p and Gto3p are cytosolic. The gene encoding Gto2p, called ECM4, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.


Pssm-ID: 198299 [Multi-domain]  Cd Length: 142  Bit Score: 255.58  E-value: 3.14e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 161 PEPLREEIERLNGRIYPAVNNGVYRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDA 240
Cdd:cd03190   1 PEELRKEIDELNEWIYDNINNGVYKAGFATTQEAYDKAVKELFEALDKLEKRLSKQPYLLGDRLTEADIRLFTTLIRFDP 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15597806 241 VYHGHFKCNLRRIEDYPNLSGWLRELYQRPGIGETVDFEHIKGHYYASHRTINPTGIVPLGP 302
Cdd:cd03190  81 VYHQHFKCNLKTIRDYPNLWRYLRRLYQNPGVFETTNFDHIKQHYYGSHFPINPNGIVPAGP 142
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
194-265 2.16e-11

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 58.49  E-value: 2.16e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15597806   194 AYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVYHGHFKcnlrrIEDYPNLSGWLRE 265
Cdd:pfam13410   1 ALERAREQLRAALDALEARLADGPGLLGDRPTLADIALAPVLARLDAAYPGLDL-----REGYPRLRAWLER 67
PRK10542 PRK10542
glutathionine S-transferase; Provisional
201-282 2.37e-03

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 38.51  E-value: 2.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806  201 QLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVyhghfKCNLrriEDYPNLSGWLRELYQRPGIGETVDFEH 280
Cdd:PRK10542 128 QLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAV-----KLNL---EGLEHIAAYMQRVAERPAVAAALKAEG 199

                 ..
gi 15597806  281 IK 282
Cdd:PRK10542 200 LK 201
 
Name Accession Description Interval E-value
ECM4 COG0435
Glutathionyl-hydroquinone reductase [Energy production and conversion];
1-317 0e+00

Glutathionyl-hydroquinone reductase [Energy production and conversion];


Pssm-ID: 440204 [Multi-domain]  Cd Length: 321  Bit Score: 626.39  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806   1 MGQLIDGRWHDQWYDT-QKDGRFQRENAQRRHWL---GEPAFPAEGGRYHLYVSLACPWAHRTLIVRKLKGLESLVDVSV 76
Cdd:COG0435   1 MGLLVDGKWHDDWYDTkDTGGRFVRQESQFRNWItadGSGGFPAEAGRYHLYVSLACPWAHRTLIFRALKGLEDAISVSV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806  77 VSWLMRENGWTFDPAHGSTGDRLDGLAFLHQRYTRDDPHYSGRVTVPLLWDKQAQKIVNNESADIVRIFNSAFDAIGANA 156
Cdd:COG0435  81 VHPLMLEDGWTFSPDPGATPDPLNGARYLHELYTKADPDYTGRVTVPVLWDKQTGTIVNNESAEIIRMLNSAFDGLAGND 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 157 LDFYPEPLREEIERLNGRIYPAVNNGVYRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLV 236
Cdd:COG0435 161 LDLYPEALREEIDALNDRIYDTVNNGVYRAGFATTQEAYEEAVDELFDALDWLEERLSDQRYLCGDRLTEADWRLFTTLV 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 237 RFDAVYHGHFKCNLRRIEDYPNLSGWLRELYQRPGIGETVDFEHIKGHYYASHRTINPTGIVPLGPRLDLARAPGRERLP 316
Cdd:COG0435 241 RFDAVYHGHFKCNRRRIADYPNLWGYLRDLYQLPGVAETVDFDHIKRHYYGSHPTINPTGIVPLGPDLDLDAPHDRDRLG 320

                .
gi 15597806 317 G 317
Cdd:COG0435 321 G 321
GST_C_Omega_like cd03190
C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione ...
161-302 3.14e-86

C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae Omega-like subfamily; composed of three Saccharomyces cerevisiae GST omega-like (Gto) proteins, Gto1p, Gto2p (also known as Extracellular mutant protein 4 or ECM4p), and Gto3p, as well as similar uncharacterized proteins from fungi and bacteria. The three Saccharomyces cerevisiae Gto proteins are omega-class GSTs with low or no GST activity against standard substrates, but have glutaredoxin/thiol oxidoreductase and dehydroascorbate reductase activity through a single cysteine residue in the active site. Gto1p is located in the peroxisomes while Gto2p and Gto3p are cytosolic. The gene encoding Gto2p, called ECM4, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.


Pssm-ID: 198299 [Multi-domain]  Cd Length: 142  Bit Score: 255.58  E-value: 3.14e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 161 PEPLREEIERLNGRIYPAVNNGVYRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDA 240
Cdd:cd03190   1 PEELRKEIDELNEWIYDNINNGVYKAGFATTQEAYDKAVKELFEALDKLEKRLSKQPYLLGDRLTEADIRLFTTLIRFDP 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15597806 241 VYHGHFKCNLRRIEDYPNLSGWLRELYQRPGIGETVDFEHIKGHYYASHRTINPTGIVPLGP 302
Cdd:cd03190  81 VYHQHFKCNLKTIRDYPNLWRYLRRLYQNPGVFETTNFDHIKQHYYGSHFPINPNGIVPAGP 142
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
194-265 2.16e-11

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 58.49  E-value: 2.16e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15597806   194 AYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVYHGHFKcnlrrIEDYPNLSGWLRE 265
Cdd:pfam13410   1 ALERAREQLRAALDALEARLADGPGLLGDRPTLADIALAPVLARLDAAYPGLDL-----REGYPRLRAWLER 67
GST_C_family cd00299
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
168-264 1.12e-09

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


Pssm-ID: 198286 [Multi-domain]  Cd Length: 100  Bit Score: 54.81  E-value: 1.12e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 168 IERLNGRIYPAVNNGVYRAGFATRQDAY--EEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAvyhgh 245
Cdd:cd00299   5 EDWADATLAPPLVRLLYLEKVPLPKDEAavEAAREELPALLAALEQLLAGRPYLAGDQFSLADVALAPVLARLEA----- 79
                        90
                ....*....|....*....
gi 15597806 246 FKCNLRRIEDYPNLSGWLR 264
Cdd:cd00299  80 LGPYYDLLDEYPRLKAWYD 98
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
47-276 2.16e-09

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 56.44  E-value: 2.16e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806  47 LYVSLACPWAHRTLIVRKLKGLE-SLVDVSVVSwlmrenGWTFDPAHgstgdrldgLAFlhqrytrddphySGRVTVPLL 125
Cdd:COG0625   4 LYGSPPSPNSRRVRIALEEKGLPyELVPVDLAK------GEQKSPEF---------LAL------------NPLGKVPVL 56
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 126 WDKQaqkIVNNESADIVRIFNSAFDAIGanaldFYPEPLREEIE------RLNGRIYPAVNNGVYRAGFATRQDAYEEAF 199
Cdd:COG0625  57 VDDG---LVLTESLAILEYLAERYPEPP-----LLPADPAARARvrqwlaWADGDLHPALRNLLERLAPEKDPAAIARAR 128
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15597806 200 VQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAvyhghFKCNLrriEDYPNLSGWLRELYQRPGIGETV 276
Cdd:COG0625 129 AELARLLAVLEARLAGGPYLAGDRFSIADIALAPVLRRLDR-----LGLDL---ADYPNLAAWLARLAARPAFQRAL 197
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
184-270 7.04e-09

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 52.29  E-value: 7.04e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806   184 YRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLvrfdaVYHGHFKCNLRRiEDYPNLSGWL 263
Cdd:pfam00043  13 YVPPEEKKEPEVDEALEKVARVLSALEEVLKGQTYLVGDKLTLADIALAPAL-----LWLYELDPACLR-EKFPNLKAWF 86

                  ....*..
gi 15597806   264 RELYQRP 270
Cdd:pfam00043  87 ERVAARP 93
GST_C_Delta_Epsilon cd03177
C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; ...
172-263 1.41e-07

C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 198287 [Multi-domain]  Cd Length: 117  Bit Score: 49.45  E-value: 1.41e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 172 NGRIYPAVNNgVYRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVyhghfKCNLR 251
Cdd:cd03177  14 SGTLYQRLRD-YYYPILFGGAEPPEEKLDKLEEALEFLETFLEGSDYVAGDQLTIADLSLVATVSTLEVV-----GFDLS 87
                        90
                ....*....|..
gi 15597806 252 RiedYPNLSGWL 263
Cdd:cd03177  88 K---YPNVAAWY 96
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
52-148 2.08e-07

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 47.63  E-value: 2.08e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806    52 ACPWAHRTLIVRKLKGLEslVDVSVVSWLMRENGWTFdpahgstgdrldglaflhqrytrddPHYSGRVTVPLLWDKQAQ 131
Cdd:pfam13409   1 FSPFSHRVRLALEEKGLP--YEIELVDLDPKDKPPEL-------------------------LALNPLGTVPVLVLPDGT 53
                          90
                  ....*....|....*..
gi 15597806   132 kiVNNESADIVRIFNSA 148
Cdd:pfam13409  54 --VLTDSLVILEYLEEL 68
GST_C_Ure2p_like cd03178
C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; ...
188-272 3.29e-06

C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; Glutathione S-transferase (GST) C-terminal domain family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p, YfcG and YghU from Escherichia coli, and related GST-like proteins. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. YfcG and YghU are two of the nine GST homologs in the genome of Escherichia coli. They display very low or no GSH transferase, but show very good disulfide bond oxidoreductase activity. YghU also shows modest organic hydroperoxide reductase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198288 [Multi-domain]  Cd Length: 110  Bit Score: 45.32  E-value: 3.29e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 188 FATRQDAYE-EAFVQLFEEL-DYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVYHGHFkcnlrriEDYPNLSGWLRE 265
Cdd:cd03178  29 FAPEKIPYAiERYTDEVKRLyGVLDKRLSDRPYLAGEEYSIADIALYPWTHYADLGGFADL-------SEYPNVKRWLER 101

                ....*..
gi 15597806 266 LYQRPGI 272
Cdd:cd03178 102 IAARPAV 108
GST_C_EF1Bgamma_like cd03181
Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of ...
172-262 4.81e-06

Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins; Glutathione S-transferase (GST) C-terminal domain family, Gamma subunit of Elongation Factor 1B (EF1Bgamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds to membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression. Also included in this subfamily is the GST_C-like domain at the N-terminus of human valyl-tRNA synthetase (ValRS) and its homologs. Metazoan ValRS forms a stable complex with Elongation Factor-1H (EF-1H), and together, they catalyze consecutive steps in protein biosynthesis, tRNA aminoacylation and its transfer to EF.


Pssm-ID: 198290 [Multi-domain]  Cd Length: 123  Bit Score: 45.24  E-value: 4.81e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 172 NGRIYPAVNNGVY-RAGFATR-QDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFdavYHGHFKCN 249
Cdd:cd03181  13 NSELLPAAATWVLpLLGIAPYnKKAVDKAKEDLKRALGVLEEHLLTRTYLVGERITLADIFVASALLRG---FETVLDPE 89
                        90
                ....*....|...
gi 15597806 250 LRRieDYPNLSGW 262
Cdd:cd03181  90 FRK--KYPNVTRW 100
GST_C_GTT1_like cd03189
C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione ...
192-270 2.07e-05

C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 198298 [Multi-domain]  Cd Length: 123  Bit Score: 43.45  E-value: 2.07e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 192 QDAYEEAFV--QLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRfdAVYhghfkcNLRRIEDYPNLSGWLRELYQR 269
Cdd:cd03189  51 ADKPLQAFInpELKRHLDFLEDHLAKHPYFAGDELTAADIMMSFPLEA--ALA------RGPLLEQYPNIAAYLERIEAR 122

                .
gi 15597806 270 P 270
Cdd:cd03189 123 P 123
GST_C_3 pfam14497
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
188-272 4.72e-05

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 464190 [Multi-domain]  Cd Length: 104  Bit Score: 41.77  E-value: 4.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806   188 FATRQDAYEEAFVQLFEE-----LDYLEGLL--GERRYLAGEYLTEADIRLFttlvrfDAVYHGHFKCNLRRIEDYPNLS 260
Cdd:pfam14497  12 YYEDEKKKAKRRKEFREErlpkfLGYFEKVLnkNGGGYLVGDKLTYADLALF------QVLDGLLYPKAPDALDKYPKLK 85
                          90
                  ....*....|..
gi 15597806   261 GWLRELYQRPGI 272
Cdd:pfam14497  86 ALHERVAARPNI 97
GST_C_Beta cd03188
C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione ...
189-274 1.03e-04

C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they are involved in the protection against oxidative stress and are able to bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs, contributing to antibiotic resistance. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH. One member of this subfamily is a GST from Burkholderia xenovorans LB400 that is encoded by the bphK gene and is part of the biphenyl catabolic pathway.


Pssm-ID: 198297 [Multi-domain]  Cd Length: 113  Bit Score: 41.08  E-value: 1.03e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 189 ATRQDAYEeafvQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLvrFDAVYHGHFkcnlrrIEDYPNLSGWLRELYQ 268
Cdd:cd03188  38 EVKAAARE----RLERRLAYLDAQLAGGPYLLGDQFSVADAYLFVVL--RWARAVGLD------LSDWPHLAAYLARVAA 105

                ....*.
gi 15597806 269 RPGIGE 274
Cdd:cd03188 106 RPAVQA 111
GST_C_Mu cd03209
C-terminal, alpha helical domain of Class Mu Glutathione S-transferases; Glutathione ...
203-264 5.65e-04

C-terminal, alpha helical domain of Class Mu Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases including cancer and neurodegenerative disorders. Some isoenzymes have additional specific functions. Human GST M1-1 acts as an endogenous inhibitor of ASK1 (apoptosis signal-regulating kinase 1) thereby suppressing ASK1-mediated cell death. Human GSTM2-2 and 3-3 have been identified as prostaglandin E2 synthases in the brain and may play crucial roles in temperature and sleep-wake regulation.


Pssm-ID: 198318 [Multi-domain]  Cd Length: 121  Bit Score: 39.15  E-value: 5.65e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 203 FEEL--DYLEGL----------LGERRYLAGEYLTEADIRLFTTLVR--------FDAvyHGHFKCNLRRIEDYPNLSGW 262
Cdd:cd03209  29 FEKLkpDYLEKLpdklklfsefLGDRPWFAGDKITYVDFLLYEALDQhrifepdcLDA--FPNLKDFLERFEALPKISAY 106

                ..
gi 15597806 263 LR 264
Cdd:cd03209 107 MK 108
GST_C_YfcG_like cd10291
C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and ...
209-272 8.90e-04

C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YfcG-like subfamily; composed of the Escherichia coli YfcG and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YfcG is one of nine GST homologs in Escherichia coli. It is expressed predominantly during the late stationary phase where the predominant form of GSH is glutathionylspermidine (GspSH), suggesting that YfcG might interact with GspSH. It has very low or no GSH transferase or peroxidase activity, but displays a unique disulfide bond reductase activity that is comparable to thioredoxins (TRXs) and glutaredoxins (GRXs). However, unlike TRXs and GRXs, YfcG does not contain a redox active cysteine residue and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YcfG reveals a bound GSSG molecule in its active site. The actual physiological substrates for YfcG are yet to be identified.


Pssm-ID: 198324 [Multi-domain]  Cd Length: 110  Bit Score: 38.40  E-value: 8.90e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15597806 209 LEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVYHGhfkcnlrrIEDYPNLSGWLRELYQRPGI 272
Cdd:cd10291  52 LDRRLAKSKYLAGDEYSIADIAIWPWVARHEWQGID--------LADFPNLKRWFERLAARPAV 107
GST_C_2 cd03180
C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; ...
209-271 2.07e-03

C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198289 [Multi-domain]  Cd Length: 110  Bit Score: 37.26  E-value: 2.07e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15597806 209 LEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVyhghfkcnlrRIE--DYPNLSGWLRELYQRPG 271
Cdd:cd03180  55 LDAQLARQAYLAGDRFTLADIALGCSVYRWLEL----------PIErpALPHLERWYARLSQRPA 109
GST_C_Phi cd03187
C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione ...
187-270 2.34e-03

C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 198296 [Multi-domain]  Cd Length: 118  Bit Score: 37.21  E-value: 2.34e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806 187 GFATRQDAYEEAFVQLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVYHGHFkcnlrrIEDYPNLSGWLREL 266
Cdd:cd03187  35 GLKTDEAVVEENEAKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPNLHYLMATPSKKL------FDSRPHVKAWWEDI 108

                ....
gi 15597806 267 YQRP 270
Cdd:cd03187 109 SARP 112
PRK10542 PRK10542
glutathionine S-transferase; Provisional
201-282 2.37e-03

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 38.51  E-value: 2.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15597806  201 QLFEELDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVyhghfKCNLrriEDYPNLSGWLRELYQRPGIGETVDFEH 280
Cdd:PRK10542 128 QLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAV-----KLNL---EGLEHIAAYMQRVAERPAVAAALKAEG 199

                 ..
gi 15597806  281 IK 282
Cdd:PRK10542 200 LK 201
GST_C_GTT2_like cd03182
C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione ...
206-272 4.04e-03

C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the Saccharomyces cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 198291 [Multi-domain]  Cd Length: 116  Bit Score: 36.53  E-value: 4.04e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15597806 206 LDYLEGLLGERRYLAGEYLTEADIRLFTTLVRFDAVyhghfkcNLRRIEDYPNLSGWLRELYQRPGI 272
Cdd:cd03182  57 LPVLDKRLAESPYVAGDRFSIADITAFVALDFAKNL-------KLPVPEELTALRRWYERMAARPSA 116
GST_N_Omega cd03055
GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
34-72 5.57e-03

GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega GST genes may be associated with the development of some types of cancer and the age-at-onset of both Alzheimer's and Parkinson's diseases.


Pssm-ID: 239353 [Multi-domain]  Cd Length: 89  Bit Score: 35.41  E-value: 5.57e-03
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 15597806  34 GEPAFPAEGGRYHLYVSLACPWAHRTLIVRKLKGLESLV 72
Cdd:cd03055   8 GSAEPPPVPGIIRLYSMRFCPYAQRARLVLAAKNIPHEV 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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