|
Name |
Accession |
Description |
Interval |
E-value |
| LLM_DMSO2_sfnG |
TIGR04021 |
dimethyl sulfone monooxygenase SfnG; This family of FMNH2-dependent members of the ... |
8-356 |
0e+00 |
|
dimethyl sulfone monooxygenase SfnG; This family of FMNH2-dependent members of the luciferase-like monooxygenase (LLM) family includes SfnG, a monooxygenase that converts dimethylsulphone (DMSO2) to methanesulphonate. This step can be followed immediately by methanesulfonate sulfonatase (an alkanesulfonate monooxygenase - see TIGR03565) for the FMNH2-dependent conversion an inorganic form. [Central intermediary metabolism, Sulfur metabolism]
Pssm-ID: 274923 Cd Length: 350 Bit Score: 678.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 8 IRFAYWVPNVSGGLVVSKIEQRTSWDIDYNRKLAQLAERNGFDYALSQIRFTAGYGAEYQHESVAISHALLAATEKLKVI 87
Cdd:TIGR04021 1 LKFAYWVPNVSGGLVVSTIEQRTDWDYDYNLKLAQTAEEVGFEYALSQIRFFASYGADKQHESTSFSLALLAATEKLKVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 88 AAILPGPWHPAVVAKQLATIDQLTNGRVAVNIVSGWFKGEFTGIGEPWLEHDERYRRSEEFIRVLKGIWTEENFTFKGDF 167
Cdd:TIGR04021 81 AAVHPGLWHPGVLAKFIATADHISNGRFAVNIVSGWFKGEFTGFGEPWLEHDERYRRSEEFIRVLKGIWTEDRFTFRGDF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 168 YRFHDYTLKPKPIQQPHPEIFQGGSSRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVKVGVNAFIIARD 247
Cdd:TIGR04021 161 YRINDFTLKPKPVQKPHPEIFQGGNSTAARRMAGRVSDWYFMNGNSLEGLREQIDDVRALARENGREVKFGLNAFVIVRD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 248 TEEEARAVLDEIIAKADYEAVNAFGDAVKQAGKASPEGDGNWAKSTFEDLVQYNDGFKTNLIGTPRQIAERIVALKAAGV 327
Cdd:TIGR04021 241 TEKEARETLREIIAKADKEAVEGFGAAVKQAGNSSPEGEGMWADSSFEDLVQYNDGFRTGLIGTPEQIAERILELKAIGV 320
|
330 340
....*....|....*....|....*....
gi 15599149 328 DLVLSAFLHFHEEVEYFGKHVLPLVRELE 356
Cdd:TIGR04021 321 DLILTGFLHFQEELEAFGEEVIPLVRELE 349
|
|
| Alkanesulfonate_monoxygenase |
cd01094 |
Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the ... |
8-258 |
2.21e-111 |
|
Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin mononucleotide (FMNH2), which is provided by the NADPH-dependent FMN oxidoreductase (SsuE).
Pssm-ID: 238527 [Multi-domain] Cd Length: 244 Bit Score: 324.61 E-value: 2.21e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 8 IRFAYWVPNVSGGLVVSKIEQRTSWDIDYNRKLAQLAERNGFDYALSQirftagyGAEYQHESVAISHALLAATEKLKVI 87
Cdd:cd01094 1 LEFGWFIPNVSGGWSLSTPPRGRPWDFEYNRQIAQAAEELGFDGALSP-------TGSSGPDGWTVAAALAAATERLKFL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 88 AAILPGPWHPAVVAKQLATIDQLTNGRVAVNIVSGWFKGEFTGIGEpWLEHDERYRRSEEFIRVLKGIWT-EENFTFKGD 166
Cdd:cd01094 74 VAIRPGLIAPTVAARQAATLDHISGGRLGLNVVTGGDPAELRMDGD-FLDHDERYARADEFLEVLRRLWTsDEPFDFEGK 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 167 FYRFHDYTLKPKPIQQPHPEIFQGGSSRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVKVGVNAFIIAR 246
Cdd:cd01094 153 FYRFKNAFLRPKPPQQPHPPIYFGGSSEAAIEFAARHADVYFTWGEPPAQVAEAIARVRAAAAAAGRDVRFGIRLHVIVR 232
|
250
....*....|..
gi 15599149 247 DTEEEARAVLDE 258
Cdd:cd01094 233 DTEEEAWAYADR 244
|
|
| SsuD |
COG2141 |
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ... |
44-354 |
4.83e-74 |
|
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) [Coenzyme transport and metabolism, General function prediction only]; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) is part of the Pathway/BioSystem: Pyrimidine degradation
Pssm-ID: 441744 [Multi-domain] Cd Length: 301 Bit Score: 231.75 E-value: 4.83e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 44 AERNGFDYALSQIRFTAGYGAeyQHESVAISHALLAATEKLKVIAA-ILPGPWHPAVVAKQLATIDQLTNGRVAVNIVSG 122
Cdd:COG2141 1 AERLGFDRVWVADHHFPPGGA--SPDPWVLLAALAAATSRIRLGTGvVVLPLRHPLVVAEQFATLDHLSGGRLDLGVGRG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 123 WFKGEFTGIGepwLEHDERYRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQPHPEIFQGGSSRAARDMASR 202
Cdd:COG2141 79 WGPDEFAAFG---LDHDERYERFEEALEVLRRLWTGEPVTFEGEFFTVEGARLVPRPVQGPHPPIWIAGSSPAGARLAAR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 203 VSDWYFTNGNSIDGIRAQVEDIRAKAAANGH---SVKVGVNAFIIARDTEEEARAVLDEIIakadyeavnafgDAVKQAG 279
Cdd:COG2141 156 LGDGVFTAGGTPEELAEAIAAYREAAAAAGRdpdDLRVSVGLHVIVAETDEEARERARPYL------------RALLALP 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 280 KASPEGDGNWAKSTFEDLVqynDGFKTNLIGTPRQIAERIVAL-KAAGVD-LVLSAFLHFHE----EVEYFGKHVLPLVR 353
Cdd:COG2141 224 RGRPPEEAEEGLTVREDLL---ELLGAALVGTPEQVAERLEELaEAAGVDeFLLQFPGLDPEdrlrSLELFAEEVLPLLR 300
|
.
gi 15599149 354 E 354
Cdd:COG2141 301 R 301
|
|
| Bac_luciferase |
pfam00296 |
Luciferase-like monooxygenase; |
8-328 |
4.92e-73 |
|
Luciferase-like monooxygenase;
Pssm-ID: 425589 [Multi-domain] Cd Length: 313 Bit Score: 229.56 E-value: 4.92e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 8 IRFAYWVPNVSGGLVVSkieqrTSWDIDYNRKLAQLAERNGFDYALsqirFTAGYGAEYQHESVAISHALLAATEKLKVI 87
Cdd:pfam00296 1 MEFGVFLPTRNGGGLGA-----GSESLRYLVELARAAEELGFDGVW----LAEHHGGPGGPDPFVVLAALAAATSRIRLG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 88 AAILPGP-WHPAVVAKQLATIDQLTNGRVAVNIVSGWFKGEFTGIGepwLEHDERYRRSEEFIRVLKGIWTEENFTFKGD 166
Cdd:pfam00296 72 TAVVPLPtRHPAVLAEQAATLDHLSGGRFDLGLGTGGPAVEFRRFG---VDHDERYARLREFLEVLRRLWRGEPVDFEGE 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 167 FYRFHDYTLKPKPIQQpHPeIFQGGSSRAARDMASRVSDWYFTNG-NSIDGIRAQVEDIRAKAAANGHS---VKVGVNAF 242
Cdd:pfam00296 149 FFTLDGAFLLPRPVQG-IP-VWVAASSPAMLELAARHADGLLLWGfAPPAAAAELIERVRAGAAEAGRDpadIRVGASLT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 243 IIARDTEEEARAVLDEIIAKAD-YEAVNAFGDAVKQAGKASPEGDGNWAKSTFEDLVQYNDGfKTNLIGTPRQIAERIVA 321
Cdd:pfam00296 227 VIVADTEEEARAEARALIAGLPfYRMDSEGAGRLAEAREIGEEYDAGDWAGAADAVPDELVR-AFALVGTPEQVAERLAA 305
|
....*..
gi 15599149 322 LKAAGVD 328
Cdd:pfam00296 306 YAEAGVD 312
|
|
| PRK00719 |
PRK00719 |
alkanesulfonate monooxygenase; Provisional |
33-352 |
1.04e-51 |
|
alkanesulfonate monooxygenase; Provisional
Pssm-ID: 234821 [Multi-domain] Cd Length: 378 Bit Score: 176.30 E-value: 1.04e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 33 DIDYNRKLAQLAERNGFDYALsqirFTAGYGAEyqhESVAISHALLAATEKLKVIAAILPGPWHPAVVAKQLATIDQLTN 112
Cdd:PRK00719 26 DHGYLQQIAQAADRLGYTGVL----IPTGRSCE---DAWLVAASLIPVTQRLKFLVALRPGLMSPTVAARMAATLDRLSN 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 113 GRVAVNIVSGWFKGEFTGIGePWLEHDERYRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQPHPEIFQGGS 192
Cdd:PRK00719 99 GRLLINLVTGGDPAELAGDG-LFLDHDERYEASAEFLRIWRRLLEGETVDFEGKHIQVKGAKLLFPPVQQPYPPLYFGGS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 193 SRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVKVGVNAFIIARDTEEEARAVLDEIIAKADYE----AV 268
Cdd:PRK00719 178 SDAAQELAAEQVDLYLTWGEPPAQVKEKIEQVRAKAAAHGRKVRFGIRLHVIVRETNEEAWQAAERLISHLDDEtiarAQ 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 269 NAFG--DAVKQA--------GKASPEGDGN-WAKStfeDLVQynDGFKTNLIGTPRQIAERIVALKAAGVD-LVLSAFLH 336
Cdd:PRK00719 258 AAFArmDSVGQQrmaalhggKRDNLEISPNlWAGV---GLVR--GGAGTALVGDPPTVAARIKEYAALGIDtFILSGYPH 332
|
330
....*....|....*.
gi 15599149 337 FhEEVEYFGKHVLPLV 352
Cdd:PRK00719 333 L-EEAYRVAELLFPLL 347
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LLM_DMSO2_sfnG |
TIGR04021 |
dimethyl sulfone monooxygenase SfnG; This family of FMNH2-dependent members of the ... |
8-356 |
0e+00 |
|
dimethyl sulfone monooxygenase SfnG; This family of FMNH2-dependent members of the luciferase-like monooxygenase (LLM) family includes SfnG, a monooxygenase that converts dimethylsulphone (DMSO2) to methanesulphonate. This step can be followed immediately by methanesulfonate sulfonatase (an alkanesulfonate monooxygenase - see TIGR03565) for the FMNH2-dependent conversion an inorganic form. [Central intermediary metabolism, Sulfur metabolism]
Pssm-ID: 274923 Cd Length: 350 Bit Score: 678.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 8 IRFAYWVPNVSGGLVVSKIEQRTSWDIDYNRKLAQLAERNGFDYALSQIRFTAGYGAEYQHESVAISHALLAATEKLKVI 87
Cdd:TIGR04021 1 LKFAYWVPNVSGGLVVSTIEQRTDWDYDYNLKLAQTAEEVGFEYALSQIRFFASYGADKQHESTSFSLALLAATEKLKVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 88 AAILPGPWHPAVVAKQLATIDQLTNGRVAVNIVSGWFKGEFTGIGEPWLEHDERYRRSEEFIRVLKGIWTEENFTFKGDF 167
Cdd:TIGR04021 81 AAVHPGLWHPGVLAKFIATADHISNGRFAVNIVSGWFKGEFTGFGEPWLEHDERYRRSEEFIRVLKGIWTEDRFTFRGDF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 168 YRFHDYTLKPKPIQQPHPEIFQGGSSRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVKVGVNAFIIARD 247
Cdd:TIGR04021 161 YRINDFTLKPKPVQKPHPEIFQGGNSTAARRMAGRVSDWYFMNGNSLEGLREQIDDVRALARENGREVKFGLNAFVIVRD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 248 TEEEARAVLDEIIAKADYEAVNAFGDAVKQAGKASPEGDGNWAKSTFEDLVQYNDGFKTNLIGTPRQIAERIVALKAAGV 327
Cdd:TIGR04021 241 TEKEARETLREIIAKADKEAVEGFGAAVKQAGNSSPEGEGMWADSSFEDLVQYNDGFRTGLIGTPEQIAERILELKAIGV 320
|
330 340
....*....|....*....|....*....
gi 15599149 328 DLVLSAFLHFHEEVEYFGKHVLPLVRELE 356
Cdd:TIGR04021 321 DLILTGFLHFQEELEAFGEEVIPLVRELE 349
|
|
| Alkanesulfonate_monoxygenase |
cd01094 |
Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the ... |
8-258 |
2.21e-111 |
|
Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin mononucleotide (FMNH2), which is provided by the NADPH-dependent FMN oxidoreductase (SsuE).
Pssm-ID: 238527 [Multi-domain] Cd Length: 244 Bit Score: 324.61 E-value: 2.21e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 8 IRFAYWVPNVSGGLVVSKIEQRTSWDIDYNRKLAQLAERNGFDYALSQirftagyGAEYQHESVAISHALLAATEKLKVI 87
Cdd:cd01094 1 LEFGWFIPNVSGGWSLSTPPRGRPWDFEYNRQIAQAAEELGFDGALSP-------TGSSGPDGWTVAAALAAATERLKFL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 88 AAILPGPWHPAVVAKQLATIDQLTNGRVAVNIVSGWFKGEFTGIGEpWLEHDERYRRSEEFIRVLKGIWT-EENFTFKGD 166
Cdd:cd01094 74 VAIRPGLIAPTVAARQAATLDHISGGRLGLNVVTGGDPAELRMDGD-FLDHDERYARADEFLEVLRRLWTsDEPFDFEGK 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 167 FYRFHDYTLKPKPIQQPHPEIFQGGSSRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVKVGVNAFIIAR 246
Cdd:cd01094 153 FYRFKNAFLRPKPPQQPHPPIYFGGSSEAAIEFAARHADVYFTWGEPPAQVAEAIARVRAAAAAAGRDVRFGIRLHVIVR 232
|
250
....*....|..
gi 15599149 247 DTEEEARAVLDE 258
Cdd:cd01094 233 DTEEEAWAYADR 244
|
|
| SsuD |
COG2141 |
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ... |
44-354 |
4.83e-74 |
|
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) [Coenzyme transport and metabolism, General function prediction only]; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) is part of the Pathway/BioSystem: Pyrimidine degradation
Pssm-ID: 441744 [Multi-domain] Cd Length: 301 Bit Score: 231.75 E-value: 4.83e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 44 AERNGFDYALSQIRFTAGYGAeyQHESVAISHALLAATEKLKVIAA-ILPGPWHPAVVAKQLATIDQLTNGRVAVNIVSG 122
Cdd:COG2141 1 AERLGFDRVWVADHHFPPGGA--SPDPWVLLAALAAATSRIRLGTGvVVLPLRHPLVVAEQFATLDHLSGGRLDLGVGRG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 123 WFKGEFTGIGepwLEHDERYRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQPHPEIFQGGSSRAARDMASR 202
Cdd:COG2141 79 WGPDEFAAFG---LDHDERYERFEEALEVLRRLWTGEPVTFEGEFFTVEGARLVPRPVQGPHPPIWIAGSSPAGARLAAR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 203 VSDWYFTNGNSIDGIRAQVEDIRAKAAANGH---SVKVGVNAFIIARDTEEEARAVLDEIIakadyeavnafgDAVKQAG 279
Cdd:COG2141 156 LGDGVFTAGGTPEELAEAIAAYREAAAAAGRdpdDLRVSVGLHVIVAETDEEARERARPYL------------RALLALP 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 280 KASPEGDGNWAKSTFEDLVqynDGFKTNLIGTPRQIAERIVAL-KAAGVD-LVLSAFLHFHE----EVEYFGKHVLPLVR 353
Cdd:COG2141 224 RGRPPEEAEEGLTVREDLL---ELLGAALVGTPEQVAERLEELaEAAGVDeFLLQFPGLDPEdrlrSLELFAEEVLPLLR 300
|
.
gi 15599149 354 E 354
Cdd:COG2141 301 R 301
|
|
| Bac_luciferase |
pfam00296 |
Luciferase-like monooxygenase; |
8-328 |
4.92e-73 |
|
Luciferase-like monooxygenase;
Pssm-ID: 425589 [Multi-domain] Cd Length: 313 Bit Score: 229.56 E-value: 4.92e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 8 IRFAYWVPNVSGGLVVSkieqrTSWDIDYNRKLAQLAERNGFDYALsqirFTAGYGAEYQHESVAISHALLAATEKLKVI 87
Cdd:pfam00296 1 MEFGVFLPTRNGGGLGA-----GSESLRYLVELARAAEELGFDGVW----LAEHHGGPGGPDPFVVLAALAAATSRIRLG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 88 AAILPGP-WHPAVVAKQLATIDQLTNGRVAVNIVSGWFKGEFTGIGepwLEHDERYRRSEEFIRVLKGIWTEENFTFKGD 166
Cdd:pfam00296 72 TAVVPLPtRHPAVLAEQAATLDHLSGGRFDLGLGTGGPAVEFRRFG---VDHDERYARLREFLEVLRRLWRGEPVDFEGE 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 167 FYRFHDYTLKPKPIQQpHPeIFQGGSSRAARDMASRVSDWYFTNG-NSIDGIRAQVEDIRAKAAANGHS---VKVGVNAF 242
Cdd:pfam00296 149 FFTLDGAFLLPRPVQG-IP-VWVAASSPAMLELAARHADGLLLWGfAPPAAAAELIERVRAGAAEAGRDpadIRVGASLT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 243 IIARDTEEEARAVLDEIIAKAD-YEAVNAFGDAVKQAGKASPEGDGNWAKSTFEDLVQYNDGfKTNLIGTPRQIAERIVA 321
Cdd:pfam00296 227 VIVADTEEEARAEARALIAGLPfYRMDSEGAGRLAEAREIGEEYDAGDWAGAADAVPDELVR-AFALVGTPEQVAERLAA 305
|
....*..
gi 15599149 322 LKAAGVD 328
Cdd:pfam00296 306 YAEAGVD 312
|
|
| PRK00719 |
PRK00719 |
alkanesulfonate monooxygenase; Provisional |
33-352 |
1.04e-51 |
|
alkanesulfonate monooxygenase; Provisional
Pssm-ID: 234821 [Multi-domain] Cd Length: 378 Bit Score: 176.30 E-value: 1.04e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 33 DIDYNRKLAQLAERNGFDYALsqirFTAGYGAEyqhESVAISHALLAATEKLKVIAAILPGPWHPAVVAKQLATIDQLTN 112
Cdd:PRK00719 26 DHGYLQQIAQAADRLGYTGVL----IPTGRSCE---DAWLVAASLIPVTQRLKFLVALRPGLMSPTVAARMAATLDRLSN 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 113 GRVAVNIVSGWFKGEFTGIGePWLEHDERYRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQPHPEIFQGGS 192
Cdd:PRK00719 99 GRLLINLVTGGDPAELAGDG-LFLDHDERYEASAEFLRIWRRLLEGETVDFEGKHIQVKGAKLLFPPVQQPYPPLYFGGS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 193 SRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVKVGVNAFIIARDTEEEARAVLDEIIAKADYE----AV 268
Cdd:PRK00719 178 SDAAQELAAEQVDLYLTWGEPPAQVKEKIEQVRAKAAAHGRKVRFGIRLHVIVRETNEEAWQAAERLISHLDDEtiarAQ 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 269 NAFG--DAVKQA--------GKASPEGDGN-WAKStfeDLVQynDGFKTNLIGTPRQIAERIVALKAAGVD-LVLSAFLH 336
Cdd:PRK00719 258 AAFArmDSVGQQrmaalhggKRDNLEISPNlWAGV---GLVR--GGAGTALVGDPPTVAARIKEYAALGIDtFILSGYPH 332
|
330
....*....|....*.
gi 15599149 337 FhEEVEYFGKHVLPLV 352
Cdd:PRK00719 333 L-EEAYRVAELLFPLL 347
|
|
| F420_Rv2161c |
TIGR03619 |
probable F420-dependent oxidoreductase, Rv2161c family; Coenzyme F420 has a limited ... |
38-264 |
2.72e-36 |
|
probable F420-dependent oxidoreductase, Rv2161c family; Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 274680 [Multi-domain] Cd Length: 246 Bit Score: 132.00 E-value: 2.72e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 38 RKLAQLAERNGFDY------------ALSQIRFTAGYGAEYQ-HESVAISHALLAATEKLKVIAAILPGPWH-PAVVAKQ 103
Cdd:TIGR03619 1 AELARAAEELGFDSllayehvaiparRETPWPDSGGGDAPDRtLDPFVALAFAAAVTSRLRLGTGVLVLPQRdPLLLAKQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 104 LATIDQLTNGRVAVNIVSGWFKGEFTGIGEPWlehDERYRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQP 183
Cdd:TIGR03619 81 AATLDLLSGGRLRLGVGVGWLREEFRALGVDF---DERGRLLDEAIEALRALWTQDPVSFHGEFVDFDPAVVRPKPVQRP 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 184 HPeIFQGGSSRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVkVGVNAFIIARDTEEEARAVLDEIIAKA 263
Cdd:TIGR03619 158 PP-IWIGGNSEAALRRAARLGDGWMPFGPPVDRLAAAVARLRDLAAAAGRDP-DAVEVVLVRTDPDGDADADAEDLAAYA 235
|
.
gi 15599149 264 D 264
Cdd:TIGR03619 236 D 236
|
|
| Nitrilotriacetate_monoxgenase |
cd01095 |
nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin ... |
33-232 |
5.10e-28 |
|
nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin mononucleotide (FMNH2) and oxygen. The FMNH2 is provided by an NADH:flavin mononucleotide (FMN) oxidorductase that uses NADH to reduce FMN to FMNH2.
Pssm-ID: 238528 [Multi-domain] Cd Length: 358 Bit Score: 112.42 E-value: 5.10e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 33 DIDYNRKLAQLAERNGFDYAlsqirFTAGYGAE-YQHESVAISH--------ALLAATEKLKVIAAILPGPWHPAVVAKQ 103
Cdd:cd01095 28 DFDHYVRLARTAERAKFDAV-----FLADGLAIrALSRPHPVARlepltllaALAAVTERIGLVATASTTYNEPYHLARR 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 104 LATIDQLTNGRVAVNIVSGWFKGEFTGIG-EPWLEHDERYRRSEEFIRVLKGIW---TEENFTFKGDFYRFHD------- 172
Cdd:cd01095 103 FASLDHISGGRAGWNVVTSANPGEARNFGrDEHPEHDERYARAEEFVEVVKGLWdswEDDALVRDKASGRFADpakvhpl 182
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 173 -----YTLKPKPIQQP-----HPEIFQGGSSRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANG 232
Cdd:cd01095 183 dhvgdHFGVRGPLNGPrspqgRPVIVQAGSSEAGREFAARHAEAVFTAQQTLEEAQAFYADVKARAAAAG 252
|
|
| F420_Rv1855c |
TIGR03560 |
probable F420-dependent oxidoreductase, Rv1855c family; Coenzyme F420 has a limited ... |
38-232 |
1.14e-25 |
|
probable F420-dependent oxidoreductase, Rv1855c family; Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by Rv1855c from Mycobacterium tuberculosis. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 274648 [Multi-domain] Cd Length: 227 Bit Score: 103.16 E-value: 1.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 38 RKLAQLAERNGFDYALSQIRFTA----GYGAEYQHESVAISHALLAATEKLKVIAAILPGPW-HPAVVAKQLATIDQLTN 112
Cdd:TIGR03560 16 LAVARAAEDAGFDALFRSDHFLQmpmvGPPEGPTLEAWTTLAGLARETSRIRLGTLVTGVTYrHPGLLAKMVATVDVLSG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 113 GRVAVNIVSGWFKGEFTGIGEPWLEHDERYRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQPHPEIFQGGS 192
Cdd:TIGR03560 96 GRAELGLGAGWYEREHRAYGIPFPPLAERFERLEEALQIITGMWSGEGVTFDGRHYRLADAIALPKPLQRPHPPILIGGG 175
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 15599149 193 --SRAARdMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANG 232
Cdd:TIGR03560 176 geKRTLR-LAARYADEFNLVFGPPDELAHKFEVLRAHCEAAG 216
|
|
| PRK02271 |
PRK02271 |
methylenetetrahydromethanopterin reductase; Provisional |
40-328 |
1.91e-15 |
|
methylenetetrahydromethanopterin reductase; Provisional
Pssm-ID: 235022 [Multi-domain] Cd Length: 325 Bit Score: 76.13 E-value: 1.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 40 LAQLAERNGFDYALSqirfTAGYGAEYQHESVAishALLAATEKLKviaaILPG---PW--HPAVVAKQLATIDQLTNGR 114
Cdd:PRK02271 19 LAKLAEDNGFDYAWI----TDHYNNRDVYMTLA---AIAAATDTIK----LGPGvtnPYtrHPAITASAIATLDEISGGR 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 115 VAVNIVSGwFKGEFTGIGepwLEHDERYRRSEEFIRVLKGIWTEENFTFKGDFyRFHDYTLKPKPIQQPHPeIFQGGSSR 194
Cdd:PRK02271 88 AVLGIGPG-DKATLDALG---IEWEKPLRTVKEAIEVIRKLWAGERVEHDGTF-KAAGAKLNVKPVQGEIP-IYMGAQGP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 195 AARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGHSVK-VGVNAFI---IARDTE---EEARAVLDEIIAKA---- 263
Cdd:PRK02271 162 KMLELAGEIADGVLINASNPKDFEWAVPLIKKGAEEAGKSRGeFDVAAYAsvsVDKDEDkarEAAKPVVAFIAAGSpppv 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15599149 264 ------DYEAVNAFGDAVKQagkaspeGDGNWAKSTFEDlvQYNDGFktNLIGTPRQIAERIVALKAAGVD 328
Cdd:PRK02271 242 lerhgiDLEAVEKIGEALSK-------GDFGEAFGAVTD--EMIDAF--SIAGTPEDVVEKIEALLEMGVT 301
|
|
| Tetrahydromethanopterin_reductase |
cd01097 |
N5,N10-methylenetetrahydromethanopterin reductase (Mer) catalyzes the reduction of N5, ... |
105-255 |
3.71e-05 |
|
N5,N10-methylenetetrahydromethanopterin reductase (Mer) catalyzes the reduction of N5,N10-methylenetetrahydromethanopterin with reduced coenzyme F420 to N5-methyltetrahydromethanopterin and oxidized coenzyme F420.
Pssm-ID: 238530 [Multi-domain] Cd Length: 202 Bit Score: 44.31 E-value: 3.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 105 ATIDQLTNGRVAVNIVSGWFKGEFtGIGEPWLEHDEryRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQPH 184
Cdd:cd01097 34 VSLDALSGGRFILGLGAGGPEVEE-GWGGPWFKPPA--RRREELEAIRRLRALRRGDPVGEDGRFLGTRSAALPPPPRGE 110
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15599149 185 PEIFQGGSSRAARDMASRVSDWYFTNGNSIDGIRAQVEDIRAKAAANGhsVKVGVNAFIIARDTEEEARAV 255
Cdd:cd01097 111 IPIYIGALGPKMLELAGEIADGWLPVAAPPELYEAALPAVREGAAAAG--RVVGDPDDVAEALRRYREAGV 179
|
|
| Flavin_utilizing_monoxygenases |
cd00347 |
Flavin-utilizing monoxygenases |
8-61 |
2.93e-04 |
|
Flavin-utilizing monoxygenases
Pssm-ID: 238209 [Multi-domain] Cd Length: 90 Bit Score: 39.27 E-value: 2.93e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 15599149 8 IRFAYWVPNVSGGlvvskiEQRTSWDIDYNRKLAQLAERNGFDYALSQIRFTAG 61
Cdd:cd00347 1 MKFGLFLPPPGGG------GATAAEDLEYLVELARLAERLGFDAAWVAIWFGGS 48
|
|
| Alkanal_monooxygenase |
cd01096 |
Alkanal monooxygenase are flavin monoxygenases. Molecular oxygen is activated by reaction with ... |
39-193 |
3.49e-04 |
|
Alkanal monooxygenase are flavin monoxygenases. Molecular oxygen is activated by reaction with reduced flavin mononucleotide (FMNH2) and reacts with an aldehyde to yield the carboxylic acid, oxidized flavin (FMN) and a blue-green light. Bacterial luciferases are heterodimers made of alpha and beta subunits which are homologous. The single activer center is on the alpha subunit. The alpha subunit has a stretch of 30 amino acid residues that is not present in the beta subunit. The beta subunit does not contain the active site and is required for the formation of the fully active heterodimer. The beta subunit does not contribute anything directly to the active site. Its role is probably to stabilize the high quantum yield conformation of the alpha subunit through interactionbs across the subunit interface.
Pssm-ID: 238529 [Multi-domain] Cd Length: 315 Bit Score: 41.98 E-value: 3.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 39 KLAQLAERNGFD-YALSQIRFTAG--YGAEYqhesVAISHaLLAATEKLKV--IAAILPGPwHPAVVAKQLATIDQLTNG 113
Cdd:cd01096 26 DTGVLVDKLNFDtALVLEHHFSENgiVGAPL----TAAAF-LLGLTERLNVgsLNQVITTH-HPVRIAEEALLLDQMSKG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599149 114 RVAVNIVSGWFKGEFTGIGEPwleHDERYRRSEEFIRVLKGIWTEENFTFKGDFYRFHDYTLKPKPIQQPHPEIFQGGSS 193
Cdd:cd01096 100 RFILGFSDCLYDKDMRFFGRP---MESQRQLFEACYEIINDALTTGYCHPDNDFYNFPKISVNPHAYSKGGPPQYVTAES 176
|
|
| Flavin_utilizing_monoxygenases |
cd00347 |
Flavin-utilizing monoxygenases |
187-233 |
5.67e-03 |
|
Flavin-utilizing monoxygenases
Pssm-ID: 238209 [Multi-domain] Cd Length: 90 Bit Score: 35.80 E-value: 5.67e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 15599149 187 IFQGGSSRAARDMASRVSDWYFTNG-NSIDGIRAQVEDIRAKAAANGH 233
Cdd:cd00347 43 IWFGGSSPPVAEQAGESGDGLLFAArEPPEEVAEALARYREAAAAAGR 90
|
|
| |
