|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
21-493 |
6.94e-169 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 484.72 E-value: 6.94e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 21 ALPLHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVAAATRLSPGRRGA 100
Cdd:COG1167 10 SGPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARLPAPAPAPRA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 101 GAPRRGGGAPRLSRRGEAmqagggvreqlvPRPFAPGVPETRTFPLATWERLQRQVLKEYGARALTHGDPQGAEPLRQAI 180
Cdd:COG1167 90 AAAVAAPALRRLLEAAPG------------VIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPELREAI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 181 ADYVNlERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPVDEQGLRPEPI--L 258
Cdd:COG1167 158 ARYLA-RRGVPASPDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGLDLDALeaA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 259 AQPQAARALCLTPSHHYPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQGLDAHERTLYIGTFTKSL 338
Cdd:COG1167 237 LRRHRPRAVYVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAALDAPGRVIYIGSFSKTL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 339 FPGLRIGYMVLPPALVAPMTVARSLQDGHNASLAQLTLARFIAGGHFGAYVRGMRNLYGERLGFLAERVGKRLGGLVEPR 418
Cdd:COG1167 317 APGLRLGYLVAPGRLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVT 396
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15599360 419 VPAGGLQMPGLLCAGIDETRAIAAAYRAGVELVGLSALHLAAPPRAGFLMGFAAYTTDELEAAVGVLAKTLRGLR 493
Cdd:COG1167 397 GPPGGLHLWLELPEGVDAEALAAAALARGILVAPGSAFSADGPPRNGLRLGFGAPSEEELEEALRRLAELLRELA 471
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
133-487 |
1.12e-59 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 200.26 E-value: 1.12e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 133 PFAPGVPETRTFPLATWERlqrqVLKEYGARALTHGDPQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCAS 212
Cdd:cd00609 2 DLSIGEPDFPPPPEVLEAL----AAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 213 VLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPVDEQGLRPEPILAQPQA----ARALCLTPsHHYPTGVTLSLERRLA 288
Cdd:cd00609 78 ALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAktpkTKLLYLNN-PNNPTGAVLSEEELEE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 289 LIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQGLDAHERTLYIGTFTKSL-FPGLRIGYMVLPP-ALVAPMTVARSLQDG 366
Cdd:cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFgLPGLRIGYLIAPPeELLERLKKLLPYTTS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 367 HNASLAQLTLARFIAGGHfgAYVRGMRNLYGERLGFLAERVgKRLGGLVEPRVPAGGLQMPGLLcAGIDETRAIAAAYRA 446
Cdd:cd00609 237 GPSTLSQAAAAAALDDGE--EHLEELRERYRRRRDALLEAL-KELGPLVVVKPSGGFFLWLDLP-EGDDEEFLERLLLEA 312
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 15599360 447 GVELVGLSALHLAAPpraGFL-MGFAAyTTDELEAAVGVLAK 487
Cdd:cd00609 313 GVVVRPGSAFGEGGE---GFVrLSFAT-PEEELEEALERLAE 350
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
155-492 |
3.13e-33 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 129.87 E-value: 3.13e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 155 QVLKEYGARALTHG-----DPQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAY- 228
Cdd:COG0436 46 DHIREAAIEALDDGvtgytPSAGIPELREAIAAYYKRRYGVDLDPDEILVTNGAKEALALALLALLNPGDEVLVPDPGYp 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 229 -YGArkAFEAAGLECLPVPVD-EQGLRPEPilAQPQAA-----RALCL-TPSHhyPTGVTLSLERRLALIEWAQRQQAWI 300
Cdd:COG0436 126 sYRA--AVRLAGGKPVPVPLDeENGFLPDP--EALEAAitprtKAIVLnSPNN--PTGAVYSREELEALAELAREHDLLV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 301 IEDD-YdSEFHYAGRPTACVQGL-DAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMTVARSLQDGHNASLAQLTLA 377
Cdd:COG0436 200 ISDEiY-EELVYDGAEHVSILSLpGLKDRTIVINSFSKSYaMTGWRIGYAVGPPELIAALLKLQSNLTSCAPTPAQYAAA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 378 RFIAGGHfgAYVRGMRNLYGERLGFLAERVgKRLGglVEPRVPAGGL-QMPGLLCAGIDETR-AIAAAYRAGVELVGLSA 455
Cdd:COG0436 279 AALEGPQ--DYVEEMRAEYRRRRDLLVEGL-NEIG--LSVVKPEGAFyLFADVPELGLDSEEfAERLLEEAGVAVVPGSA 353
|
330 340 350
....*....|....*....|....*....|....*...
gi 15599360 456 LHLAAPpraGFL-MGFAAyTTDELEAAVGVLAKTLRGL 492
Cdd:COG0436 354 FGPAGE---GYVrISYAT-SEERLEEALERLARFLERY 387
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
32-344 |
7.42e-22 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 97.81 E-value: 7.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 32 IRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVAAATRLSPGrrgagaprrgggapr 111
Cdd:PRK15481 14 IRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPSPVAL--------------- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 112 lsrrgEAMQAGggvreqLVPRPFAPGVPETRTFP--LATWERLQRQVlKEYGARALthgDPQ----GAEPLRQAI-ADY- 183
Cdd:PRK15481 79 -----EGGDPG------TPLHDLAGGNPDPQRLPdlSRYFARLSRTP-RLYGDAPV---SPElhawAARWLRDDCpVAFe 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 184 VNLERGARATADRVlvltssqqalgLCASVLldAGERIFVEDPAYYGARKAFEAAGLECLPVPVDEQGLRPEpILAQP-- 261
Cdd:PRK15481 144 IDLTSGAIDAIERL-----------LCAHLL--PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPE-KLERAla 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 262 QAARALCLTPSHHYPTGVTLSLERRLALIEWAQRQ-QAWIIEDDydsefHYA---GRPTACVQGLDAHERTLyIGTFTKS 337
Cdd:PRK15481 210 QGARAVILTPRAHNPTGCSLSARRAAALRNLLARYpQVLVIIDD-----HFAllsSSPYHSVIPQTTQRWAL-IRSVSKA 283
|
....*..
gi 15599360 338 LFPGLRI 344
Cdd:PRK15481 284 LGPDLRL 290
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
158-422 |
9.87e-22 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 96.73 E-value: 9.87e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 158 KEYGARAL----THGDPQGAEP-LRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGAR 232
Cdd:PRK05764 50 KEAAIEALddgkTKYTPAAGIPeLREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 233 KAFEAAGleCLPVPVD---EQGLRPEPilAQPQAA-----RALCL-TPSHhyPTGVTLSLERRLALIEWAQRQQAWIIED 303
Cdd:PRK05764 130 EMVKLAG--GVPVFVPtgeENGFKLTV--EQLEAAitpktKALILnSPSN--PTGAVYSPEELEAIADVAVEHDIWVLSD 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 304 D------YDSEFHYAgrPTACVqgLDAHERTLYIGTFTKSlF--PGLRIGYMVLPPALVAPMTvarSLQdGHN------- 368
Cdd:PRK05764 204 EiyeklvYDGAEFTS--IASLS--PELRDRTITVNGFSKA-YamTGWRLGYAAGPKELIKAMS---KLQ-SHStsnptsi 274
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 15599360 369 ---ASLAQLTLARfiagghfgAYVRGMRNLYGERLGFLAERVGKRLGglVEPRVPAG 422
Cdd:PRK05764 275 aqyAAVAALNGPQ--------DEVEEMRQAFEERRDLMVDGLNEIPG--LECPKPEG 321
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
23-88 |
4.63e-19 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 80.95 E-value: 4.63e-19
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15599360 23 PLHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVA 88
Cdd:cd07377 1 PLYEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFVA 66
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
147-485 |
6.69e-18 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 85.05 E-value: 6.69e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 147 ATWERLQRQVLKEYGaralthgDPQGAEPLRQAIADYVNLERGARATADR-VLVLTSSQQALGLCASVLLDAGERIFVED 225
Cdd:pfam00155 22 AEKDALAGGTRNLYG-------PTDGHPELREALAKFLGRSPVLKLDREAaVVFGSGAGANIEALIFLLANPGDAILVPA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 226 PAYYGARKAFEAAGLECLPVPV---DEQGLRPEPILAQPQAARALCLTPSHHYPTGVTLSLERRLALIEWAQRQQAWIIE 302
Cdd:pfam00155 95 PTYASYIRIARLAGGEVVRYPLydsNDFHLDFDALEAALKEKPKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILLLV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 303 DDYDSEFHYAG-RPTACVQGLDAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMtvaRSLQDGHNAS--LAQLTLAR 378
Cdd:pfam00155 175 DEAYAGFVFGSpDAVATRALLAEGPNLLVVGSFSKAFgLAGWRVGYILGNAAVISQL---RKLARPFYSSthLQAAAAAA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 379 FIAGGHFGAYVRGMRNLYGERLGFLAErvgkrlgGLVEPRVPAGGLQMPGLLCAGIDETRAIAAAyRAGVELVGLSALHL 458
Cdd:pfam00155 252 LSDPLLVASELEEMRQRIKERRDYLRD-------GLQAAGLSVLPSQAGFFLLTGLDPETAKELA-QVLLEEVGVYVTPG 323
|
330 340
....*....|....*....|....*...
gi 15599360 459 AAPPRAGFL-MGFAAYTTDELEAAVGVL 485
Cdd:pfam00155 324 SSPGVPGWLrITVAGGTEEELEELLEAI 351
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
172-358 |
1.04e-17 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 84.61 E-value: 1.04e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 172 GAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPVDEQG 251
Cdd:PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 252 ----LRPEPILAQ-PQAARALCL-TPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTA--CVQGLD 323
Cdd:PRK06108 142 ggwtLDLDRLLAAiTPRTRALFInSPNN--PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRApsFLDIAE 219
|
170 180 190
....*....|....*....|....*....|....*.
gi 15599360 324 AHERTLYIGTFTKS-LFPGLRIGYMVLPPALVAPMT 358
Cdd:PRK06108 220 PDDRIIFVNSFSKNwAMTGWRLGWLVAPPALGQVLE 255
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
21-89 |
1.51e-15 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 76.05 E-value: 1.51e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15599360 21 ALPLHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVAA 89
Cdd:COG2188 3 PVPLYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAE 71
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
173-361 |
3.57e-14 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 73.63 E-value: 3.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 173 AEPLRQAIADYVNLErgaratADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAY--YgaRKAFEAAGLECLPVPVDEQ 250
Cdd:COG0079 50 ATALREALAEYYGVP------PEQVLVGNGSDELIQLLARAFLGPGDEVLVPEPTFseY--PIAARAAGAEVVEVPLDED 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 251 -GLRPEPILAQ-PQAARALCL-TPshHYPTGVTLSLERRLALIEWAQrQQAWIIEDdydsE--FHYAGRPTACVQGLDAH 325
Cdd:COG0079 122 fSLDLDALLAAiTERTDLVFLcNP--NNPTGTLLPREELEALLEALP-ADGLVVVD----EayAEFVPEEDSALPLLARY 194
|
170 180 190
....*....|....*....|....*....|....*..
gi 15599360 326 ERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMTVAR 361
Cdd:COG0079 195 PNLVVLRTFSKAYgLAGLRLGYAIASPELIAALRRVR 231
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
155-437 |
2.90e-13 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 71.45 E-value: 2.90e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 155 QVLKEYGARAL----THGDPQGAEP-LRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYY 229
Cdd:PRK08361 49 KNIKEAAKRALdegwTHYTPNAGIPeLREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFV 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 230 GARKAFEAAGLECLPVPV-DEQGLRPEP---ILAQPQAARALCLT-PSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDD 304
Cdd:PRK08361 129 CYVEDAKIAEAKPIRIPLrEENEFQPDPdelLELITKRTRMIVINyPNN--PTGATLDKEVAKAIADIAEDYNIYILSDE 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 305 ------YDSEFHYagrPTACVqgldAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMTVARSLQDGHNASLAQLTLA 377
Cdd:PRK08361 207 pyehflYEGAKHY---PMIKY----APDNTILANSFSKTFaMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGI 279
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 378 RFIAGGHFGAYVRGMRNLYGERLGFLAERVGKRLGglVEPRVPAGGLqmpgLLCAGIDET 437
Cdd:PRK08361 280 EALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPH--IKVFEPKGAF----YVFANIDET 333
|
|
| PRK06836 |
PRK06836 |
pyridoxal phosphate-dependent aminotransferase; |
171-402 |
2.07e-12 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180720 Cd Length: 394 Bit Score: 68.68 E-value: 2.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 171 QGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPaYYGARKAF-EAAGLECLPVPVDE 249
Cdd:PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAP-YFVEYRFYvDNHGGKLVVVPTDT 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 250 QGLRPEpiLAQPQAA-----RALCL-TPshHYPTGVTLSLE--RRLA-LIEWAQR---QQAWIIEDDYDSEFHYAGRPTA 317
Cdd:PRK06836 152 DTFQPD--LDALEAAitpktKAVIInSP--NNPTGVVYSEEtlKALAaLLEEKSKeygRPIYLISDEPYREIVYDGAEVP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 318 CVqgLDAHERTLYIGTFTKSL-FPGLRIGYMVLPPA------LVAPMTVA-RSLqdGH-NA-SLAQLTLARFI-AGGHFG 386
Cdd:PRK06836 228 YI--FKYYDNSIVVYSFSKSLsLPGERIGYIAVNPEmedaddLVAALVFAnRIL--GFvNApALMQRVVAKCLdATVDVS 303
|
250
....*....|....*...
gi 15599360 387 AYVRGMRNLYG--ERLGF 402
Cdd:PRK06836 304 IYKRNRDLLYDglTELGF 321
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
24-87 |
2.15e-12 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 61.86 E-value: 2.15e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15599360 24 LHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVV 87
Cdd:pfam00392 1 LYEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
28-87 |
4.77e-12 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 61.05 E-value: 4.77e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 28 IQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVV 87
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
176-355 |
7.85e-12 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 66.67 E-value: 7.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 176 LRQAIADYVNLERGAR-ATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLEclPVPVDEQG--- 251
Cdd:PRK07309 72 LRQAAADFVKEKYNLDyAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAE--IVEIDTTEndf 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 252 -LRPE----PILAQPQAARALCLT-PSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQGLdAH 325
Cdd:PRK07309 150 vLTPEmlekAILEQGDKLKAVILNyPAN--PTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY-LP 226
|
170 180 190
....*....|....*....|....*....|.
gi 15599360 326 ERTLYIGTFTKS-LFPGLRIGYMVLPPALVA 355
Cdd:PRK07309 227 DQTILINGLSKShAMTGWRIGLIFAPAEFTA 257
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
17-92 |
9.94e-12 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 64.57 E-value: 9.94e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15599360 17 PQLQALPLHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVAAATR 92
Cdd:COG2186 1 KPIRRRSLAEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVREPSP 76
|
|
| PRK05957 |
PRK05957 |
pyridoxal phosphate-dependent aminotransferase; |
171-353 |
3.22e-11 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235654 Cd Length: 389 Bit Score: 65.09 E-value: 3.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 171 QGAEPLRQAIADYVNLERGARATADRVLVLTS-SQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPVDE 249
Cdd:PRK05957 65 QGIPPLLEAITQKLQQDNGIELNNEQAIVVTAgSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDD 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 250 Q-GLRPEPILAQPQA-ARALcLTPSHHYPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRP---TACVQGLDA 324
Cdd:PRK05957 145 NyQLQPEAIEQAITPkTRAI-VTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKhfsPGSIPGSGN 223
|
170 180 190
....*....|....*....|....*....|
gi 15599360 325 HERTLYigTFTKSL-FPGLRIGYMVLPPAL 353
Cdd:PRK05957 224 HTISLY--SLSKAYgFASWRIGYMVIPIHL 251
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
172-424 |
1.09e-10 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 63.29 E-value: 1.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 172 GAEPLRQAIADYVNLERGARATADR-VLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPVDEQ 250
Cdd:PRK07681 70 GIQEFHEAVTEYYNNTHNVILNADKeVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 251 G-----LR--PEPIlaqPQAARALCLT-PSHHYPTGVTLSLERRlaLIEWAQRQQAWIIEDDYDSEFHYAGR-PTACVQG 321
Cdd:PRK07681 150 NdflpdLEliPEEI---ADKAKMMILNfPGNPVPAMAHEDFFKE--VIAFAKKHNIIVVHDFAYAEFYFDGNkPISFLSV 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 322 LDAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMTVARSLQDG------HNASLAQLTlarfiaggHFGAYVRGMRN 394
Cdd:PRK07681 225 PGAKEVGVEINSLSKSYsLAGSRIGYMIGNEEIVRALTQFKSNTDYgvflpiQKAACAALR--------NGAAFCEKNRG 296
|
250 260 270
....*....|....*....|....*....|
gi 15599360 395 LYGERLGFLAErvGKRLGGLvEPRVPAGGL 424
Cdd:PRK07681 297 IYQERRDTLVD--GFRTFGW-NVDKPAGSM 323
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
154-355 |
1.64e-10 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 62.67 E-value: 1.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 154 RQVLKEYGARALTHG-DPQGAEP-LRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGA 231
Cdd:PRK07550 48 LRALAEAAADPAAHLyGPVEGLPeLREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNH 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 232 RKAFEAAGLECLPVPVDEQ-GLRPEPILAQP---QAARALCL-TPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYD 306
Cdd:PRK07550 128 KMWLDMLGIRPVYLPCDEGpGLLPDPAAAEAlitPRTRAIALvTPNN--PTGVVYPPELLHELYDLARRHGIALILDETY 205
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 15599360 307 SEFHY-AGRPTACVQGLDAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVA 355
Cdd:PRK07550 206 RDFDSgGGAPHDLFADPDWDDTLVHLYSFSKSYaLTGHRVGAVVASPARIA 256
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
171-349 |
2.16e-09 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 59.28 E-value: 2.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 171 QGAEPLRQAIADYVNLERGARATADRVlVLTSS-QQALGLCASVLLDAGERIFVEDPAY--YGARKAFeaAGLE-----C 242
Cdd:TIGR01265 73 VGALAAREAVAEYLSSDLPGKLTADDV-VLTSGcSQAIEICIEALANPGANILVPRPGFplYDTRAAF--SGLEvrlydL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 243 LP---VPVDEQGLRPepiLAQPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACV 319
Cdd:TIGR01265 150 LPekdWEIDLDGLES---LADEKTVAIVVINPSN--PCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPM 224
|
170 180 190
....*....|....*....|....*....|.
gi 15599360 320 QGLDAHERTLYIGTFTKSLF-PGLRIGYMVL 349
Cdd:TIGR01265 225 ASFASIVPVLSLGGISKRWVvPGWRLGWIII 255
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
172-406 |
4.24e-09 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 58.20 E-value: 4.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 172 GAEPLRQAIADYVNLERGARATADR-VLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLEclPVPVD-- 248
Cdd:PRK07683 66 GLLELRKAACNFVKDKYDLHYSPESeIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAK--PVFIDtr 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 249 EQGLRPEPILAQPQ-AARALCLT-PSHHYPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQGLDAHE 326
Cdd:PRK07683 144 STGFRLTAEALENAiTEKTRCVVlPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMRE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 327 RTLYIGTFTKS-LFPGLRIGYMVLPPALVAPM--------TVARSLqdGHNASLAQLTLARFIAgghfgayvRGMRNLYG 397
Cdd:PRK07683 224 KTIVINGLSKShSMTGWRIGFLFAPSYLAKHIlkvhqynvTCASSI--SQYAALEALTAGKDDA--------KMMRHQYK 293
|
....*....
gi 15599360 398 ERLGFLAER 406
Cdd:PRK07683 294 KRRDYVYNR 302
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
176-357 |
1.15e-08 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 57.05 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 176 LRQAIADYVNLERG-ARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGleCLPVPVDEQG--- 251
Cdd:PRK07682 62 LRQEIAKYLKKRFAvSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAG--GVPVPVATTLene 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 252 --LRPEPI---LAQPQAARALClTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPT--ACVQGLda 324
Cdd:PRK07682 140 fkVQPAQIeaaITAKTKAILLC-SPNN--PTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTsfASIKGM-- 214
|
170 180 190
....*....|....*....|....*....|....
gi 15599360 325 HERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPM 357
Cdd:PRK07682 215 RERTILISGFSKGFaMTGWRLGFIAAPVYFSEAM 248
|
|
| hisC |
TIGR01141 |
histidinol-phosphate aminotransferase; Alternate names: histidinol-phosphate transaminase; ... |
169-357 |
1.80e-08 |
|
histidinol-phosphate aminotransferase; Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme. [Amino acid biosynthesis, Histidine family]
Pssm-ID: 273467 Cd Length: 350 Bit Score: 56.12 E-value: 1.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 169 DPQGAEpLRQAIADYVNLErgaratADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPVD 248
Cdd:TIGR01141 54 DPDPAE-LKQALADYYGVD------PEQILLGNGSDEIIDLLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLD 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 249 EQGLRPEPILAQPQAARA----LClTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYdseFHYAGRPTACvQGLDA 324
Cdd:TIGR01141 127 EDGQLDLEDILVAIDDKPklvfLC-SPNN--PTGNLFSRGDIEAVLERTPGDALVVVDEAY---GEFSGEPSTL-PLLAE 199
|
170 180 190
....*....|....*....|....*....|....
gi 15599360 325 HERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPM 357
Cdd:TIGR01141 200 YPNLIVLRTLSKAFgLAGLRIGYAIANAEIIDAL 233
|
|
| PRK09082 |
PRK09082 |
methionine aminotransferase; Validated |
155-355 |
2.14e-08 |
|
methionine aminotransferase; Validated
Pssm-ID: 181642 [Multi-domain] Cd Length: 386 Bit Score: 56.08 E-value: 2.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 155 QVLKEYGARALTHGDPQ-----GAEPLRQAIADYVNLERGARATADRVLVLTS-SQQALgLCA-SVLLDAGERIFVEDPA 227
Cdd:PRK09082 46 PYLVEALAYAMAAGHNQyppmtGVAALREAIAAKTARLYGRQYDADSEITVTAgATEAL-FAAiLALVRPGDEVIVFDPS 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 228 YYGARKAFEAAGLECLPVPVDEQGLRPEpiLAQPQAA-----RALCL-TPshHYPTGVTLSLERRLALIEWAQRQQAWII 301
Cdd:PRK09082 125 YDSYAPAIELAGGRAVRVALQPPDFRVD--WQRFAAAisprtRLIILnTP--HNPSGTVWSAADMRALWQLIAGTDIYVL 200
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 15599360 302 EDDYDSEFHYAGRPTACVQgldAH----ERTLYIGTFTKSL-FPGLRIGYMVLPPALVA 355
Cdd:PRK09082 201 SDEVYEHIVFDGAGHASVL---RHpelrERAFVVSSFGKTYhVTGWKVGYCVAPAALSA 256
|
|
| pdhR |
PRK09464 |
pyruvate dehydrogenase complex transcriptional repressor PdhR; |
28-87 |
3.13e-08 |
|
pyruvate dehydrogenase complex transcriptional repressor PdhR;
Pssm-ID: 181879 [Multi-domain] Cd Length: 254 Bit Score: 54.64 E-value: 3.13e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 28 IQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVV 87
Cdd:PRK09464 15 IEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFV 74
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
157-347 |
4.72e-08 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 55.20 E-value: 4.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 157 LKEYGARALT-----HGDPQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAY--- 228
Cdd:PRK08363 51 MKEAYCRAIKeghnyYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYppy 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 229 ------YGARKAFEAAgleclpvpVDEQGLRPEPILAQPQ---AARALCLTpSHHYPTGVTLSLERRLALIEWAQRQQAW 299
Cdd:PRK08363 131 tglvkfYGGVPVEYRT--------IEEEGWQPDIDDIRKKiteKTKAIAVI-NPNNPTGALYEKKTLKEILDIAGEHDLP 201
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 15599360 300 IIEDD------YDSEFHYAGRPTACVQgldaherTLYIGTFTKSLF-PGLRIGYM 347
Cdd:PRK08363 202 VISDEiydlmtYEGKHVSPGSLTKDVP-------VIVMNGLSKVYFaTGWRLGYI 249
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
159-356 |
8.85e-08 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 54.29 E-value: 8.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 159 EYGARALTHGDPQ-----GAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARK 233
Cdd:PRK07337 50 EAAARALRRGVTQytsalGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRH 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 234 AFEAAGLECLPVPVDEQGlRPEPILAQPQAA-----RALCL-TPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDS 307
Cdd:PRK07337 130 FVAAAEGRPVLVPSGPAE-RFQLTAADVEAAwgertRGVLLaSPSN--PTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ 206
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 15599360 308 EFHYAGRPtacVQGLDAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVAP 356
Cdd:PRK07337 207 GLSYDAAP---VSALSLGDDVITINSFSKYFnMTGWRLGWLVVPEALVGT 253
|
|
| PRK06348 |
PRK06348 |
pyridoxal phosphate-dependent aminotransferase; |
169-409 |
9.26e-08 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180537 Cd Length: 384 Bit Score: 53.96 E-value: 9.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 169 DPQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVP-V 247
Cdd:PRK06348 64 DSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILEtY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 248 DEQGLRPEPILAQP---QAARALCL-TPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDD-YDS-EFHYAGRPTACVQG 321
Cdd:PRK06348 144 EEDGFQINVKKLEAlitSKTKAIILnSPNN--PTGAVFSKETLEEIAKIAIEYDLFIISDEvYDGfSFYEDFVPMATLAG 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 322 LdaHERTLYIGTFTKSL-FPGLRIGYMVLPPALVapmTVARSLQDG---HNASLAQltLARFIAGGHFGAYVRGMRNLYG 397
Cdd:PRK06348 222 M--PERTITFGSFSKDFaMTGWRIGYVIAPDYII---ETAKIINEGicfSAPTISQ--RAAIYALKHRDTIVPLIKEEFQ 294
|
250
....*....|..
gi 15599360 398 ERLGFLAERVGK 409
Cdd:PRK06348 295 KRLEYAYKRIES 306
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
17-88 |
1.12e-07 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 52.62 E-value: 1.12e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15599360 17 PQLQALPLHARIQRAIRQLILDGALAPGNPLPAsRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVA 88
Cdd:COG1802 5 SPLRRESLAEQVYEALREAILSGELPPGERLSE-AELAERLGVSRTPVREALRRLEAEGLVEIRPNRGARVA 75
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
159-357 |
1.23e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 53.90 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 159 EYGARALTHGD-----PQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARK 233
Cdd:PRK08960 52 AAGQAALAAGHtrytaARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 234 AFEAAGLECLPVPVDEQG---LRPEPILA--QPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSE 308
Cdd:PRK08960 132 FLRLVEGAAQLVPVGPDSryqLTPALVERhwNADTVGALVASPAN--PTGTLLSRDELAALSQALRARGGHLVVDEIYHG 209
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 15599360 309 FHYaGRPTACVQGLDAHerTLYIGTFTKSL-FPGLRIGYMVLPPALVAPM 357
Cdd:PRK08960 210 LTY-GVDAASVLEVDDD--AFVLNSFSKYFgMTGWRLGWLVAPPAAVPEL 256
|
|
| PRK09990 |
PRK09990 |
DNA-binding transcriptional regulator GlcC; Provisional |
32-92 |
1.31e-07 |
|
DNA-binding transcriptional regulator GlcC; Provisional
Pssm-ID: 182186 [Multi-domain] Cd Length: 251 Bit Score: 52.85 E-value: 1.31e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15599360 32 IRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVAAATR 92
Cdd:PRK09990 16 IERLIVDGVLKVGQALPSERRLCEKLGFSRSALREGLTVLRGRGIIETAQGRGSFVARLNR 76
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
21-87 |
1.88e-07 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 52.14 E-value: 1.88e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15599360 21 ALPLHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVV 87
Cdd:PRK09764 3 HKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYV 69
|
|
| PRK10421 |
PRK10421 |
DNA-binding transcriptional repressor LldR; Provisional |
22-87 |
1.90e-07 |
|
DNA-binding transcriptional repressor LldR; Provisional
Pssm-ID: 236690 [Multi-domain] Cd Length: 253 Bit Score: 52.08 E-value: 1.90e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15599360 22 LPLHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVV 87
Cdd:PRK10421 1 RRLSDEVADRVRALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFI 66
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
157-315 |
8.61e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 51.01 E-value: 8.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 157 LKEYGARALTHGDPQGAEPLRQAIADYvnLER-GARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPaYYGARKAF 235
Cdd:PRK07568 52 IKNYDEEVLAYSHSQGIPELREAFAKY--YKKwGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEP-FYANYNGF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 236 -EAAGLECLPVPVD-EQGLRPEPI-----LAQPQAaRALCLT-PSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDS 307
Cdd:PRK07568 129 aTSAGVKIVPVTTKiEEGFHLPSKeeiekLITPKT-KAILISnPGN--PTGVVYTKEELEMLAEIAKKHDLFLISDEVYR 205
|
....*...
gi 15599360 308 EFHYAGRP 315
Cdd:PRK07568 206 EFVYDGLK 213
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
167-366 |
1.87e-06 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 50.17 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 167 HGDPQGAEPLRQAIADYVNLERGArATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLE----- 241
Cdd:TIGR01264 69 YAPTVGALSAREAIASYYHNPDGP-IEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEvklyn 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 242 CLPVPVDEQGLRPEPILAQPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQG 321
Cdd:TIGR01264 148 LLPDKSWEIDLKQLESLIDEKTAALIVNNPSN--PCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS 225
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 15599360 322 LDAHERTLYIGTFTKS-LFPGLRIGYMVlppaLVAPMTVARSLQDG 366
Cdd:TIGR01264 226 LSSTVPILSCGGLAKRwLVPGWRLGWII----IHDRRGILRDIRDG 267
|
|
| PRK10225 |
PRK10225 |
Uxu operon transcriptional regulator; |
32-87 |
9.17e-06 |
|
Uxu operon transcriptional regulator;
Pssm-ID: 182318 [Multi-domain] Cd Length: 257 Bit Score: 47.32 E-value: 9.17e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 15599360 32 IRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVV 87
Cdd:PRK10225 18 IRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGIYV 73
|
|
| PRK07777 |
PRK07777 |
putative succinyldiaminopimelate transaminase DapC; |
157-355 |
1.38e-05 |
|
putative succinyldiaminopimelate transaminase DapC;
Pssm-ID: 236095 [Multi-domain] Cd Length: 387 Bit Score: 47.34 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 157 LKEYGARALTHGDPQ-----GAEPLRQAIADYVNLERGARATAD-RVLVLTSSQQALGLCASVLLDAGERIFVEDPAY-- 228
Cdd:PRK07777 42 MLEAAQEAIAGGVNQyppgpGIPELRAAIAAQRRRRYGLEYDPDtEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYds 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 229 YGARKAFeaAGLECLPVPVDEQGLRPEPILAQPQAA-----RALCLTpSHHYPTGVTLSLERRLALIEWAQRQQAWIIED 303
Cdd:PRK07777 122 YAAVIAM--AGAHRVPVPLVPDGRGFALDLDALRAAvtprtRALIVN-SPHNPTGTVLTAAELAAIAELAVEHDLLVITD 198
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 15599360 304 DYDSEFHYAGRPTACVQGLDA-HERTLYIGTFTKSL-FPGLRIGYMVLPPALVA 355
Cdd:PRK07777 199 EVYEHLVFDGARHLPLATLPGmRERTVTISSAAKTFnVTGWKIGWACGPAPLIA 252
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
7-84 |
1.94e-05 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 45.99 E-value: 1.94e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15599360 7 LESVKARLLHPQLQAlplhariqrAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSG 84
Cdd:PRK11523 1 MEITEPRRLYQQLAA---------ELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSG 69
|
|
| PRK06107 |
PRK06107 |
aspartate transaminase; |
172-434 |
2.16e-05 |
|
aspartate transaminase;
Pssm-ID: 180403 Cd Length: 402 Bit Score: 46.65 E-value: 2.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 172 GAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVedPAYYGARKAFEAAGLECLPVPVD--- 248
Cdd:PRK06107 71 GTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVII--PAPYWVSYPDMVLANDGTPVIVAcpe 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 249 EQG--LRPEPILA--QPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQ-QAWIIEDDYDSEFHYAGRPTACVQGLD 323
Cdd:PRK06107 149 EQGfkLTPEALEAaiTPRTRWLILNAPSN--PTGAVYSRAELRALADVLLRHpHVLVLTDDIYDHIRFDDEPTPHLLAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 324 AH--ERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMTVARSLQDGHNASLAQLTLARFIAGGHfgAYVRGMRNLYGERL 400
Cdd:PRK06107 227 PElrDRVLVTNGVSKTYaMTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQ--SFVTESVAVYKQRR 304
|
250 260 270
....*....|....*....|....*....|....*
gi 15599360 401 GFLAERVGkRLGGLvEPRVPAGGLQM-PGllCAGI 434
Cdd:PRK06107 305 DYALALLN-AIPGL-SCLVPDGAFYLyVN--CAGL 335
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
172-376 |
4.24e-05 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 45.93 E-value: 4.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 172 GAEPLRQAIADY------VNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPV 245
Cdd:PTZ00433 76 GSPEAREAVATYwrnsfvHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 246 PVD-----EQGLRPEPILAQPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQ 320
Cdd:PTZ00433 156 NCRpekdwEADLDEIRRLVDDRTKALIMTNPSN--PCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVA 233
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 15599360 321 GLDAHERTLYIGTFTKSLF-PGLRIGYMVlppaLVAPMTVARSLQDGHNaSLAQLTL 376
Cdd:PTZ00433 234 DFDTTVPRVILGGTAKNLVvPGWRLGWLL----LVDPHGNGGDFLDGMK-RLGMLVC 285
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
82-382 |
4.53e-05 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 45.92 E-value: 4.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 82 GSGSVVAAATRLSPGRRGAGAPRRGGGAPRLSRRGEAMQAGGGvreqlvPRPFAP---GVPET----RTFPLATwerlqr 154
Cdd:PLN00145 8 GGGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGG------PRPVLPlghGDPSAfpcfRTAPEAE------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 155 qvlkEYGARALTHGD------PQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAY 228
Cdd:PLN00145 76 ----DAVAAALRSGKynsystCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 229 --YGARKAF---EAAGLECLPV---PVDEQGLRPepiLAQPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWI 300
Cdd:PLN00145 152 plYEARAVFsglEVRHFDLLPErgwEVDLEGVEA---LADENTVAMVIINPNN--PCGSVYSYEHLAKIAETARKLGILV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 301 IEDDYDSEFHYAGRPTACVQGLDAHERTLYIGTFTKS-LFPGLRIGYMVL--PPALVAPMTVARSLQDGHNASLAQLTla 377
Cdd:PLN00145 227 IADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRwVVPGWRLGWIATcdPNGILKETKVVDSIRNYLNISTDPAT-- 304
|
....*
gi 15599360 378 rFIAG 382
Cdd:PLN00145 305 -FVQG 308
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
170-357 |
7.82e-05 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 44.74 E-value: 7.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 170 PQGAEPLRQAIADYVNLErgaratADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPV-D 248
Cdd:PRK06225 65 PEGFPELRELILKDLGLD------DDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIyS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 249 EQ---GLRPEPILAQPQAARALCLTPSHHYPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHyAGRPTACvqgLDAH 325
Cdd:PRK06225 139 EEcnyKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFA-REHTLAA---EYAP 214
|
170 180 190
....*....|....*....|....*....|...
gi 15599360 326 ERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPM 357
Cdd:PRK06225 215 EHTVTSYSFSKIFgMAGLRIGAVVATPDLIEVV 247
|
|
| PRK11402 |
PRK11402 |
transcriptional regulator PhoB; |
23-87 |
9.32e-05 |
|
transcriptional regulator PhoB;
Pssm-ID: 183118 [Multi-domain] Cd Length: 241 Bit Score: 44.06 E-value: 9.32e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15599360 23 PLHARIQRAIRQLILDGALAPGNPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVV 87
Cdd:PRK11402 9 LLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFV 73
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
157-409 |
2.10e-04 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 43.51 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 157 LKEYGARALTHG--DPQGAEPLRQAIADYVNLERGARATADRVLVLT-SSQQALGLCASVLLDAGERIFVEDPAYYGARK 233
Cdd:PRK09148 52 LCETAQDPRTHRysASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATlGSKEGFANMAQAITAPGDVILCPNPSYPIHAF 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 234 AFEAAGLECLPVPV--DEQGLR----------PEPIlaqpqaarALCLT-PSHhyPTGVTLSLERRLALIEWAQRQQAWI 300
Cdd:PRK09148 132 GFIMAGGVIRSVPAepDEEFFPaleravrhsiPKPI--------ALIVNyPSN--PTAYVADLDFYKDVVAFAKKHDIII 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 301 IEDDYDSEFHYAGRPTACV-QGLDAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMTVARSLQDGHNASLAQLTLAR 378
Cdd:PRK09148 202 LSDLAYSEIYFDGNPPPSVlQVPGAKDVTVEFTSMSKTFsMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATA 281
|
250 260 270
....*....|....*....|....*....|.
gi 15599360 379 FIAGGhfGAYVRGMRNLYGERLGFLAERVGK 409
Cdd:PRK09148 282 ALNGP--QDCIAEMRELYKKRRDVLVESFGR 310
|
|
| PRK08175 |
PRK08175 |
aminotransferase; Validated |
157-365 |
2.13e-04 |
|
aminotransferase; Validated
Pssm-ID: 181268 [Multi-domain] Cd Length: 395 Bit Score: 43.55 E-value: 2.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 157 LKEYGARALTHG--DPQGAEPLRQAIADY------VNLERGARAtadrvLVLTSSQQALGLCASVLLDAGERIFVEDPAY 228
Cdd:PRK08175 51 LCEVAQRPDTHGysTSRGIPRLRRAISRWyqdrydVDIDPESEA-----IVTIGSKEGLAHLMLATLDHGDTVLVPNPSY 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 229 ----YGarkaFEAAGLECLPVP----VD-----EQGLR---PEPilaqpqaaRALCLT-PSHhyPTGVTLSLERRLALIE 291
Cdd:PRK08175 126 pihiYG----AVIAGAQVRSVPlvegVDffnelERAIResyPKP--------KMMILGfPSN--PTAQCVELEFFEKVVA 191
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15599360 292 WAQRQQAWIIEDDYDSEFHYAG-RPTACVQGLDAHERTLYIGTFTKSL-FPGLRIGYMVLPPALVAPMTVARSLQD 365
Cdd:PRK08175 192 LAKRYDVLVVHDLAYADIVYDGwKAPSIMQVPGAKDVAVEFFTLSKSYnMAGWRIGFMVGNPELVSALARIKSYHD 267
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
142-348 |
2.49e-04 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 43.37 E-value: 2.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 142 RTFPLATWERLQRQVLKEYGARALTHGDPQGaeplRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERI 221
Cdd:PLN02656 48 HTTHVAQEAVVDALQSNKFNGYAPTVGLPQA----RRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANI 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 222 FVEDPAY--YGARKAF---EAAGLECLPVPVDEQGLRPEPILAQPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQ 296
Cdd:PLN02656 124 LLPRPGFpiYELCAAFrhlEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGN--PCGNVYSYQHLKKIAETAEKL 201
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 15599360 297 QAWIIEDDYDSEFHYAGRPTACVQGLDAHERTLYIGTFTKS-LFPGLRIGYMV 348
Cdd:PLN02656 202 KILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRwIVPGWRLGWFV 254
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
172-370 |
3.32e-04 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 43.08 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 172 GAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAY-----YGARKAFEAAGLECLPVP 246
Cdd:PLN00143 75 GILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFpdvetYAIFHHLEIRHFDLLPEK 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 247 VDEQGLRPEPILAQPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQGLDAHE 326
Cdd:PLN00143 155 GWEVDLDAVEAIADENTIAMVIINPGN--PCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIV 232
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 15599360 327 RTLYIGTFTKS-LFPGLRIGYMVL--PPALVAPMTVARSLQDGHNAS 370
Cdd:PLN00143 233 PVITLGSISKRwMIPGWGLGWLVTcdPSGLLQICEIADSIKKALNPA 279
|
|
| PRK06207 |
PRK06207 |
pyridoxal phosphate-dependent aminotransferase; |
171-357 |
5.05e-04 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235742 Cd Length: 405 Bit Score: 42.44 E-value: 5.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 171 QGAEPLRQAIADYVNLERGARATADRVLVLT-SSQQALGLCASVLLDAGERIFVEDPAYYGARKAFEAAGLECLPVPVD- 248
Cdd:PRK06207 78 RGDADIRELLAARLAAFTGAPVDAADELIITpGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDy 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 249 -----EQGLRPEPILAQPQAARALCLTPSHHYPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACV--QG 321
Cdd:PRK06207 158 lsadkRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLraLP 237
|
170 180 190
....*....|....*....|....*....|....*..
gi 15599360 322 LDAHERTLYIG-TFTKSLfPGLRIGYMVLPPALVAPM 357
Cdd:PRK06207 238 IDPENVITIMGpSKTESL-SGYRLGVAFGSPAIIDRM 273
|
|
| PLN02607 |
PLN02607 |
1-aminocyclopropane-1-carboxylate synthase |
169-345 |
1.60e-03 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 215327 [Multi-domain] Cd Length: 447 Bit Score: 41.03 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 169 DPQGAEPLRQAIADYVNLERGARAT--ADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAYYG-ARKAFEAAGLECLPV 245
Cdd:PLN02607 93 DYHGLKSFRQAMASFMEQIRGGKARfdPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGfDRDLRWRTGVKIVPI 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 246 PVDEQG---LRPEPILAQPQAARA--------LCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDD-------YDS 307
Cdd:PLN02607 173 HCDSSNnfqVTPQALEAAYQEAEAanirvrgvLITNPSN--PLGATVQRSVLEDILDFVVRKNIHLVSDEiysgsvfSAS 250
|
170 180 190
....*....|....*....|....*....|....*....
gi 15599360 308 EFHYAGRPTACVQGLDAHERTLYIGTFTKSL-FPGLRIG 345
Cdd:PLN02607 251 EFVSVAEIVEARGYKGVAERVHIVYSLSKDLgLPGFRVG 289
|
|
| PLN02187 |
PLN02187 |
rooty/superroot1 |
166-364 |
4.05e-03 |
|
rooty/superroot1
Pssm-ID: 215119 [Multi-domain] Cd Length: 462 Bit Score: 39.71 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 166 THGDPQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAGERIFVEDPAY--YGARKAF---EAAGL 240
Cdd:PLN02187 103 SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFphYDARAAYsglEVRKF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 241 ECLPVPVDEQGLRPEPILAQPQAARALCLTPSHhyPTGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQ 320
Cdd:PLN02187 183 DLLPEKEWEIDLEGIEAIADENTVAMVVINPNN--PCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMG 260
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 15599360 321 GLDAHERTLYIGTFTKS-LFPGLRIGYMVL--PPALVAPMTVARSLQ 364
Cdd:PLN02187 261 KFASIVPVLTLAGISKGwVVPGWKIGWIALndPEGVFETTKVLQSIK 307
|
|
| PRK12414 |
PRK12414 |
putative aminotransferase; Provisional |
162-353 |
7.03e-03 |
|
putative aminotransferase; Provisional
Pssm-ID: 183514 Cd Length: 384 Bit Score: 38.62 E-value: 7.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 162 ARALTHGDPQ-----GAEPLRQAIADYVNLERGARATADR-VLVLTSSQQALGLCASVLLDAGERIFVEDPAY--YGark 233
Cdd:PRK12414 52 ARAMRDGHNQyapmaGIAALREALAEKTERLYGARYDPASeVTVIASASEGLYAAISALVHPGDEVIYFEPSFdsYA--- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599360 234 afeaagleclPVpVDEQGLRPEPILAQPQAAR------ALCLTP--------SHHYPTGVTLSLERRLALIEWAQRQQAW 299
Cdd:PRK12414 129 ----------PI-VRLQGATPVAIKLSPEDFRvnwdevAAAITPrtrmiivnTPHNPSATVFSAADLARLAQLTRNTDIV 197
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 15599360 300 IIEDDYDSEFHYAGRPTacvQGLDAH----ERTLYIGTFTKSL-FPGLRIGYMVLPPAL 353
Cdd:PRK12414 198 ILSDEVYEHVVFDGARH---HSMARHrelaERSVIVSSFGKSYhVTGWRVGYCLAPAEL 253
|
|
| |
