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Conserved domains on  [gi|15599824|ref|NP_253318|]
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lysine-specific permease [Pseudomonas aeruginosa PAO1]

Protein Classification

amino acid permease( domain architecture ID 11435488)

amino acid permease facilitates the transport of amino acids; similar to Aspergillus nidulans proline-specific permease which is required for high-affinity proline transport

Gene Ontology:  GO:0016020|GO:0015171|GO:0003333

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
5-484 0e+00

Amino acid permease [Amino acid transport and metabolism];


:

Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 784.75  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   5 NTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTY 84
Cdd:COG0833   3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTY 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  85 GSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVV 164
Cdd:COG0833  83 ATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVI 162

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 165 TVVIFIGVGLATIFGIMHGvESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQV 244
Cdd:COG0833 163 TVIAFIIVGLLMIFGIIGG-HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQV 241

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 245 FWRILMFYILAIFVIGMLIPYTDPNllkndasdISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYN 324
Cdd:COG0833 242 FWRILLFYILAIFVIAALIPYTDAG--------VAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWS 313

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 325 LALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGG 404
Cdd:COG0833 314 LAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGG 393

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 405 RLEDLPYRAKLFPFGPLFAFALCMVITLGQNYqalvgeriDWIGLLATYISLPLFLAIWLGYRWKKRARFVRYHEMDVSP 484
Cdd:COG0833 394 DLEDLKYKAPLFPFGPIFAFILCLIVIIGQAF--------DPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465
 
Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
5-484 0e+00

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 784.75  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   5 NTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTY 84
Cdd:COG0833   3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTY 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  85 GSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVV 164
Cdd:COG0833  83 ATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVI 162

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 165 TVVIFIGVGLATIFGIMHGvESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQV 244
Cdd:COG0833 163 TVIAFIIVGLLMIFGIIGG-HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQV 241

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 245 FWRILMFYILAIFVIGMLIPYTDPNllkndasdISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYN 324
Cdd:COG0833 242 FWRILLFYILAIFVIAALIPYTDAG--------VAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWS 313

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 325 LALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGG 404
Cdd:COG0833 314 LAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGG 393

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 405 RLEDLPYRAKLFPFGPLFAFALCMVITLGQNYqalvgeriDWIGLLATYISLPLFLAIWLGYRWKKRARFVRYHEMDVSP 484
Cdd:COG0833 394 DLEDLKYKAPLFPFGPIFAFILCLIVIIGQAF--------DPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465
PRK10836 PRK10836
lysine transporter; Provisional
 3-481 0e+00

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 782.85  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    3 DLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFC 82
Cdd:PRK10836   4 ETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   83 TYGSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIK 162
Cdd:PRK10836  84 TYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIK 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  163 VVTVVIFIGVGLATIFGIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIR 242
Cdd:PRK10836 164 VTTVIVFIIVGVLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVR 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  243 QVFWRILMFYILAIFVIGMLIPYTDPNLLKNDASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRML 322
Cdd:PRK10836 244 QVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRML 323

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  323 YNLALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQ 402
Cdd:PRK10836 324 YTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQ 403

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15599824  403 GGRLEDLPYRAKLFPFGPLFAFALCMVITLGQNYQALVGERIDWIGLLATYISLPLFLAIWLGYRWKKRARFVRYHEMD 481
Cdd:PRK10836 404 GHDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSEMK 482
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 13-481 2.57e-147

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 429.78  E-value: 2.57e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    13 RRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPV-SGSFCTYGSRFVED 91
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    92 GFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIFIG 171
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   172 VGLATIFGimhGVESPGFSNFTMGDAP--FVGG-----FQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQV 244
Cdd:TIGR00913 161 LSIILNCG---GGPNHGYIGFRYWHDPgaFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRT 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   245 FWRILMFYILAIFVIGMLIPYTDPNLLKN-DASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLY 323
Cdd:TIGR00913 238 FWRILVFYILTLFLIGFLVPYNDPRLLSSsSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLY 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   324 NLALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQG 403
Cdd:TIGR00913 318 ALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQG 397

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15599824   404 GRLEDLPYRAKLFPFGPLFAFALCMVITLGQNYQALVGERIDWIGLLATYISLPLFLAIWLGYR-WKKRARFVRYHEMD 481
Cdd:TIGR00913 398 RSLDELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPVKFSAKSFFEAYLSLPIFIALYIGHKvYKRDKLIIKLDDID 476
AA_permease pfam00324
Amino acid permease;
20-478 2.50e-129

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 383.59  E-value: 2.50e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    20 HLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSRFVEDGFGFALGW 99
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   100 NYWYNWAVTIAAELVAAQLVMSFW--FPEVPGIY-WSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIFIGVGLAT 176
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYLWvWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   177 IFGImHGVESPGFSNFT--MGDAPFVGGFQ-AMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFWRILMFYI 253
Cdd:pfam00324 161 LSGG-NPNDGAIFRYLGdnGGKNNFPPGFGkGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   254 LAIFVIGMLIPYTDPNLLKndASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALEGKAPR 333
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLLN--DSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPK 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   334 LFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGGRLEDLPYRA 413
Cdd:pfam00324 318 FLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKA 397

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   414 KLFPFGPLFAFALCMVITLGQNYQALVGER-----IDWIGLLATYISLPLFLAIWLGYRWKKRARFVRYH 478
Cdd:pfam00324 398 PLGPLGVILGLAAIIIILIIQFLYAFLPVPggpknWGAGSFAAAYLIVLLFLIILIGVKLHVKNWKPQLL 467
 
Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
5-484 0e+00

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 784.75  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   5 NTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTY 84
Cdd:COG0833   3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTY 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  85 GSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVV 164
Cdd:COG0833  83 ATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVI 162

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 165 TVVIFIGVGLATIFGIMHGvESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQV 244
Cdd:COG0833 163 TVIAFIIVGLLMIFGIIGG-HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQV 241

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 245 FWRILMFYILAIFVIGMLIPYTDPNllkndasdISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYN 324
Cdd:COG0833 242 FWRILLFYILAIFVIAALIPYTDAG--------VAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWS 313

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 325 LALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGG 404
Cdd:COG0833 314 LAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGG 393

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 405 RLEDLPYRAKLFPFGPLFAFALCMVITLGQNYqalvgeriDWIGLLATYISLPLFLAIWLGYRWKKRARFVRYHEMDVSP 484
Cdd:COG0833 394 DLEDLKYKAPLFPFGPIFAFILCLIVIIGQAF--------DPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465
PRK10836 PRK10836
lysine transporter; Provisional
 3-481 0e+00

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 782.85  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    3 DLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFC 82
Cdd:PRK10836   4 ETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   83 TYGSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIK 162
Cdd:PRK10836  84 TYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIK 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  163 VVTVVIFIGVGLATIFGIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIR 242
Cdd:PRK10836 164 VTTVIVFIIVGVLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVR 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  243 QVFWRILMFYILAIFVIGMLIPYTDPNLLKNDASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRML 322
Cdd:PRK10836 244 QVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRML 323

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  323 YNLALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQ 402
Cdd:PRK10836 324 YTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQ 403

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15599824  403 GGRLEDLPYRAKLFPFGPLFAFALCMVITLGQNYQALVGERIDWIGLLATYISLPLFLAIWLGYRWKKRARFVRYHEMD 481
Cdd:PRK10836 404 GHDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSEMK 482
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-473 1.88e-159

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 459.97  E-value: 1.88e-159
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   2 TDLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSF 81
Cdd:COG1113   3 TSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPA-VLLSYLIAGLIVFLVMRALGEMAVANPVSGSF 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  82 CTYGSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALI 161
Cdd:COG1113  82 SDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALI 161

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 162 KVVTVVIFIGVGLATIFG--IMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPI 239
Cdd:COG1113 162 KVVAIVAFIVVGLLLIFFgfGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPK 241

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 240 AIRQVFWRILMFYILAIFVIGMLIPYTDPNLlkndasdiSVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYAST 319
Cdd:COG1113 242 AINSVIWRILLFYVGSLFVILALVPWNQIGA--------GGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTS 313

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 320 RMLYNLALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGY 399
Cdd:COG1113 314 RMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRL 393

                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15599824 400 LAQGgrLEDLPYRAKLFPFGPLFAFALCMVItlgqnyqaLVGERIDWIGLLATYISLPLFLAIWLGYRWKKRAR 473
Cdd:COG1113 394 PREG--AAALKFKMPGFPYTSYLTLAFLAAV--------LVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRR 457
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 13-481 2.57e-147

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 429.78  E-value: 2.57e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    13 RRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPV-SGSFCTYGSRFVED 91
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    92 GFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIFIG 171
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   172 VGLATIFGimhGVESPGFSNFTMGDAP--FVGG-----FQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQV 244
Cdd:TIGR00913 161 LSIILNCG---GGPNHGYIGFRYWHDPgaFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRT 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   245 FWRILMFYILAIFVIGMLIPYTDPNLLKN-DASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLY 323
Cdd:TIGR00913 238 FWRILVFYILTLFLIGFLVPYNDPRLLSSsSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLY 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   324 NLALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQG 403
Cdd:TIGR00913 318 ALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQG 397

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15599824   404 GRLEDLPYRAKLFPFGPLFAFALCMVITLGQNYQALVGERIDWIGLLATYISLPLFLAIWLGYR-WKKRARFVRYHEMD 481
Cdd:TIGR00913 398 RSLDELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPVKFSAKSFFEAYLSLPIFIALYIGHKvYKRDKLIIKLDDID 476
AA_permease pfam00324
Amino acid permease;
20-478 2.50e-129

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 383.59  E-value: 2.50e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    20 HLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSRFVEDGFGFALGW 99
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   100 NYWYNWAVTIAAELVAAQLVMSFW--FPEVPGIY-WSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIFIGVGLAT 176
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYLWvWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   177 IFGImHGVESPGFSNFT--MGDAPFVGGFQ-AMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFWRILMFYI 253
Cdd:pfam00324 161 LSGG-NPNDGAIFRYLGdnGGKNNFPPGFGkGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   254 LAIFVIGMLIPYTDPNLLKndASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALEGKAPR 333
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLLN--DSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPK 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   334 LFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGGRLEDLPYRA 413
Cdd:pfam00324 318 FLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKA 397

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   414 KLFPFGPLFAFALCMVITLGQNYQALVGER-----IDWIGLLATYISLPLFLAIWLGYRWKKRARFVRYH 478
Cdd:pfam00324 398 PLGPLGVILGLAAIIIILIIQFLYAFLPVPggpknWGAGSFAAAYLIVLLFLIILIGVKLHVKNWKPQLL 467
PRK11387 PRK11387
S-methylmethionine permease;
1-433 6.00e-116

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 349.53  E-value: 6.00e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    1 MTDLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGS 80
Cdd:PRK11387   1 MPEPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   81 FCTYGSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFAL 160
Cdd:PRK11387  81 FHVYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  161 IKVVTVVIFIGVGLATIFGIM---HGVESPGFSNFTmGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNI 237
Cdd:PRK11387 161 IKVVTILAFIVLGGAAIFGFIpmqDGSPAPGLRNLT-AEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVI 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  238 PIAIRQVFWRILMFYILAIFVIGMLIPYtdpnllknDASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYA 317
Cdd:PRK11387 240 PVAIRTTIARLVIFFVGTVLVLAALIPM--------QQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYA 311

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  318 STRMLYNLALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRK 397
Cdd:PRK11387 312 SGRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRR 391

                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 15599824  398 GYLAQGGRLEDLPYRAKLFPFGPLFAFALCMVITLG 433
Cdd:PRK11387 392 RHLRDGKALSELAYRAPWYPLTPILGFVLCLLACVG 427
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 6-418 2.70e-98

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 303.33  E-value: 2.70e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824     6 TSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYG 85
Cdd:TIGR01773   4 SQSGLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPA-ALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    86 SRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVT 165
Cdd:TIGR01773  83 DDAIGRWAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIA 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   166 VVIFIGVGLATIFGIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVF 245
Cdd:TIGR01773 163 IIAFIILGAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVI 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   246 WRILMFYILAIFVIGMLIPYTDPNLlkndasdISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNL 325
Cdd:TIGR01773 243 WRIIVFYLGSIFIVVALLPWNSPNL-------LEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSL 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   326 ALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGgr 405
Cdd:TIGR01773 316 AERGDAPRVFMKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANG-- 393

                         410
                  ....*....|...
gi 15599824   406 lEDLPYRAKLFPF 418
Cdd:TIGR01773 394 -EAIKIRMWLYPW 405
PRK10249 PRK10249
phenylalanine transporter; Provisional
 1-432 5.92e-87

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 274.17  E-value: 5.92e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    1 MTDLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGS 80
Cdd:PRK10249   8 SEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPA-VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   81 FCTYGSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFAL 160
Cdd:PRK10249  87 FAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFAL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  161 IKVVTVVIFIGVGLATIFGiMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIA 240
Cdd:PRK10249 167 IKVLAIIGMIGFGLWLLFS-GHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKA 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  241 IRQVFWRILMFYILAIFVIGMLIPYTDpnlLKNDAsdisvSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTR 320
Cdd:PRK10249 246 VNQVVYRILLFYIGSLVVLLALYPWVE---VKSNS-----SPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSR 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  321 MLYNLALEGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYL 400
Cdd:PRK10249 318 MLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMR 397

                        410       420       430
                 ....*....|....*....|....*....|...
gi 15599824  401 AQGgrlEDLPYRAKLFPFGPLFAFA-LCMVITL 432
Cdd:PRK10249 398 RQG---RETQFKALLYPFGNYLCIAfLGMILLL 427
PRK10238 PRK10238
aromatic amino acid transporter AroP;
8-419 1.24e-83

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 265.67  E-value: 1.24e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    8 QGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSR 87
Cdd:PRK10238   6 HGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPG-IILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYK 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   88 FVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVV 167
Cdd:PRK10238  85 YWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  168 IFIGVGLATIFGiMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFWR 247
Cdd:PRK10238 165 AMIIFGGWLLFS-GNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYR 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  248 ILMFYILAIFVIGMLIPYTDPNllkndasdISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLAL 327
Cdd:PRK10238 244 ILIFYIGSLAVLLSLMPWTRVT--------ADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQ 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  328 EGKAPRLFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGGRLE 407
Cdd:PRK10238 316 QGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTR 395

                        410
                 ....*....|..
gi 15599824  408 dlpYRAKLFPFG 419
Cdd:PRK10238 396 ---FPALLYPLG 404
PRK10746 PRK10746
putative transport protein YifK; Provisional
 10-435 2.46e-81

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 259.75  E-value: 2.46e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   10 QQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSRFV 89
Cdd:PRK10746   6 PELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS-VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYM 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   90 EDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIF 169
Cdd:PRK10746  85 SPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVM 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  170 IGVGLATI-FGIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFWRI 248
Cdd:PRK10746 165 IVIGLGVIfFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRI 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  249 LMFYILAIFVIGMLIPYTDPNllkndasdISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALE 328
Cdd:PRK10746 245 LIFYVGAIFVIVTIFPWNEIG--------SNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKN 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  329 GKAPRLFSRVSRSGVPRN--ALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQggrL 406
Cdd:PRK10746 317 RQLPAAMAKVSRHGVPVAgvAVSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA---I 393

                        410       420       430
                 ....*....|....*....|....*....|.
gi 15599824  407 EDLPYRAKLFPFGPLF--AFALCMVITLGQN 435
Cdd:PRK10746 394 ASHPFRSILFPWANYLtmAFLICVLIGMYFN 424
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 2-353 6.47e-75

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 243.49  E-value: 6.47e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    2 TDLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSF 81
Cdd:PRK11049   8 ADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPS-IIFVYMIIGFMLFFVMRAMGELLLSNLEYKSF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   82 CTYGSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALI 161
Cdd:PRK11049  87 SDFASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMI 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  162 KVVTVVIFIGVGLATifgIMHGVESPG-----FSN-------FTMGDAPFVGGFQamvgvamIAGFSFQGTELIGIAAGE 229
Cdd:PRK11049 167 KIVAIVALIVVGLVM---VAMHFQSPTgveasFAHlwndggmFPKGLSGFFAGFQ-------IAVFAFVGIELVGTTAAE 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  230 SENPRKNIPIAIRQVFWRILMFYILAIFVIGMLIPYTDPNLLKndasdisvSPFTLLFERAGFAAAAGVMNAVILSAILS 309
Cdd:PRK11049 237 TKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDK--------SPFVELFVLVGLPAAASVINFVVLTSAAS 308

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 15599824  310 AGNSGMYASTRMLYNLALEGKAPRLFSRVSRSGVPRNALYATTL 353
Cdd:PRK11049 309 SANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCI 352
PRK10197 PRK10197
GABA permease;
23-407 1.43e-63

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 212.94  E-value: 1.43e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   23 MIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSRFVEDGFGFALGWNYW 102
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGPA-VLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYW 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  103 YNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIFIGVGLATIFGIMH 182
Cdd:PRK10197  80 WFWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYP 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  183 GVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFWRILMFYILAIFVIGML 262
Cdd:PRK10197 160 YAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVAL 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  263 IPYTDPNLLkndasdiSVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALEGKAPRLFSRVSRSG 342
Cdd:PRK10197 240 IPWNMPGLK-------AVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSK 312

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15599824  343 VPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQGGRLE 407
Cdd:PRK10197 313 TPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIR 377
proY PRK10580
putative proline-specific permease; Provisional
 8-364 3.17e-63

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 212.37  E-value: 3.17e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    8 QGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSR 87
Cdd:PRK10580   3 SKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPS-VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   88 FVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVV 167
Cdd:PRK10580  82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  168 IFIGVGLATIF-GIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFW 246
Cdd:PRK10580 162 IMIVAGIGIIIwGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  247 RILMFYILAIFVIGMLIPYtdpnllknDASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLA 326
Cdd:PRK10580 242 RILVFYVGTLFVIMSIYPW--------NQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMA 313

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 15599824  327 LEGKAPRLFSRVSRSGVPrnalYATTLVGALCFLTSAF 364
Cdd:PRK10580 314 EQGSAPKIFSKTSRRGIP----WVTVLVMTTALLFAVY 347
PRK15049 PRK15049
L-asparagine permease;
19-418 8.39e-59

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 201.77  E-value: 8.39e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   19 RHLNMIAIGGSIGTGLFVASGATVATAGPGGALLsYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSRFVEDGFGFALG 98
Cdd:PRK15049  33 RQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAG 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   99 WNYWYNWAVTIAAELVAAQLVMSFW--FPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIFIGVGlaT 176
Cdd:PRK15049 112 WMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVG--T 189

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  177 IF---GIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFWRILMFYI 253
Cdd:PRK15049 190 VFlgsGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYV 269

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  254 LAIFVIGMLIPYtdpnllknDASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALEGKAPR 333
Cdd:PRK15049 270 GSVVLLVMLLPW--------SAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPS 341

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  334 LFSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGylAQGGRLEDLPYRA 413
Cdd:PRK15049 342 FMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKA--IKEGKAADVSFKL 419


                 ....*
gi 15599824  414 KLFPF 418
Cdd:PRK15049 420 PGAPF 424
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
5-440 1.41e-46

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 167.38  E-value: 1.41e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   5 NTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAGPGgALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTY 84
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA-AILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  85 GSRFVEDGFGFALGWNYWYNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFALIKVV 164
Cdd:COG0531  81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLL 160

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 165 TVVIFIGVGLATIFGimhgvesPGFSNFTmgdaPFVGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQV 244
Cdd:COG0531 161 VLLLFIVVGLFAFDP-------ANFTPFL----PAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILS 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 245 FWRILMFYILAIFVIGMLIPYtdpnllknDASDISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYN 324
Cdd:COG0531 230 LLIVGVLYILVSLALTGVVPY--------DELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYA 301

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824 325 LALEGKAPRLFSRVS-RSGVPRNALYATTLVGALCFLTSAfgdsTVYTWLLNTSGMCGFIAWLGIAISHYRFRKGYLAQG 403
Cdd:COG0531 302 MARDGLLPKVFAKVHpRFGTPVNAILLTGVIALLLLLLGA----ASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLP 377

                       410       420       430
                ....*....|....*....|....*....|....*..
gi 15599824 404 GrledlPYRAkLFPFGPLFAFALCMVITLGQNYQALV 440
Cdd:COG0531 378 R-----PFRV-PLPLIPILGILLCLFLLYLLGPGALL 408
AA_permease_2 pfam13520
Amino acid permease;
24-429 3.33e-25

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 107.40  E-value: 3.33e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    24 IAIGGSIGTGLFVASGatvaTAGPGGALLSYALIGLMVYFLMTSL--GEMAAYMPVSGSFCTYGSRFVEDGFGFALGWNY 101
Cdd:pfam13520   9 LVIGSVIGSGIFVAPL----VASGGPALIVWGWIAAIIFSLAVGLvyAELSSALPRSGGIYVYLENAFGKFVAFLAGWSN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   102 WYNWAVTIAA-ELVAAQLVMSFWFPEVPGIYW-----SAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIFIgvgla 175
Cdd:pfam13520  85 WFAYVLGLASsASVAASYLLSALGPDLVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILI----- 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   176 TIFGIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQGTELIGIAAgeSENPRKNIPIAIRQVFWRILMFYILA 255
Cdd:pfam13520 160 IILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVS--EEVKKRNVPKAIFIGVIIVGVLYILV 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   256 IFVIGMLIPYTDPNLLKNdasdiSVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALEGKAP--R 333
Cdd:pfam13520 238 NIAFFGVVPDDEIALSSG-----LGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsR 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   334 LFSRVSRSGVPRNALYATTLVGALCFLTSAFGDStVYTWLLNTSGMCGFIAWLGIAISHYRFRKgylaQGGRLEDLPYRA 413
Cdd:pfam13520 313 FFAKVNKFGSPIRAIILTAILSLILLLLFLLSPA-AYNALLSLSAYGYLLSYLLPIIGLLILRK----KRPDLGRIPGRW 387

                         410
                  ....*....|....*.
gi 15599824   414 KLFPFGPLFAFALCMV 429
Cdd:pfam13520 388 PVAIFGILFSLFLIVA 403
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 3-357 1.07e-16

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 82.56  E-value: 1.07e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824     3 DLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATV-ATAGPgGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSF 81
Cdd:TIGR00906  17 DLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVArNDSGP-AIVLSFLISGLAAVLSGFCYAEFGARVPKAGSA 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    82 CTYGSRFVEDGFGFALGWNYWYNWAVTIAA----------ELVAAQL---------VMSFWFPEVPGIYwSAIFLGIMFG 142
Cdd:TIGR00906  96 YLYSYVTVGELWAFITGWNLILEYVIGTAAvarswsayfdELLNKQIgqfrrtyfkLNYDGLAEYPDFF-AVCLILLLAV 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   143 LNVISARGFGESEFWFALIKVVTVVIFIGVGLATI-FGIMHGVESPGFSNFTmgdaPFvgGFQAMVGVAMIAGFSFQGTE 221
Cdd:TIGR00906 175 LLSFGVKESAWVNKIFTAINILVLLFVIIAGFTKAdVANWSITEEKGAGGFM----PY--GFTGVLSGAATCFFAFIGFD 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   222 LIGIAAGESENPRKNIPIAIRQVFWRILMFYILAIFVIGMLIPYtdpNLLKNDasdisvSPFTLLFERAGFAAAAGVMNA 301
Cdd:TIGR00906 249 AIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPY---YLLDPD------APFPVAFEYVGWDPAKYIVAV 319

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15599824   302 VILSAILSAGNSGMYASTRMLYNLALEGKAPRLFSRV-SRSGVPRNALYATTLVGAL 357
Cdd:TIGR00906 320 GALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQInSKTKTPINATVVSGAIAAL 376
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 24-477 1.37e-10

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 63.23  E-value: 1.37e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    24 IAIGGSIGTGLFVASGATVATAG-PGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYgsrfVEDGFGFALGW-NY 101
Cdd:TIGR00911  52 IIVGTIIGSGIFVSPKGVLKNAGsVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNY----ILEVFGPLLAFlRL 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   102 WY-------NWAVTIAaeLVAAQLVMSFWFPEVPGIYW-----SAIFLGIMFGLNVISARGFGESEFWFALIKVVTVVIF 169
Cdd:TIGR00911 128 WIellvirpGSQAVNA--LNFAIYILTPVFPDCEVPEWairlvAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLI 205

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   170 IGVGLATIFGimHGVESPGFSNFTMGDAPFVGGfqamVGVAMIAG-FSFQGTELIGIAAGESENPRKNIPIAIRQVFWRI 248
Cdd:TIGR00911 206 IITGWVQLGK--GGVESLNPKNAFEGTETSAGG----IVLAFYSGiWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIV 279

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   249 LMFYILAifVIGMLIPYTDPNLLKNDAsdISVSPFTLLFERAGFAAAAgvmnAVILSAILSAgNSGMYASTRMLYNLALE 328
Cdd:TIGR00911 280 TFIYVLT--NIAYFTVLSPEELLASLA--VAVDFGERLLGVMSWAMPA----LVGLSCFGSV-NGSLFSSSRLFFVGGRE 350

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   329 GKAPRLFSRVSRSgvPRNALYATTLVGALCFLTSAFGDS-------TVYTWLLNTSGMCGFIaWLgiaishyRFRKgyla 401
Cdd:TIGR00911 351 GHLPSLLSMIHVK--RLTPLPSLLIVCTLTLLMLFSGDIyslinliSFANWLFNALAVAGLL-WL-------RYKR---- 416

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15599824   402 qggrlEDLPYRAKLFPFGPLFAFALCMVITLGQNYQALVGERIDWIGLLatyISLPLFLaiwLGYRWKKRARFVRY 477
Cdd:TIGR00911 417 -----PEMNRPIKVPLFFPVFFLLSCLFLIILSLYSPPVGCGVGFIIML---TGVPVYF---FGVWWQNKPKWFRY 481
frlA PRK11357
amino acid permease;
9-338 2.41e-10

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 62.57  E-value: 2.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    9 GQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVATAG-PGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTY--- 84
Cdd:PRK11357   3 SQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGtPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYlkn 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   85 -GSRFVedgfGFALGW-NYWYNWAVTIAAELVAAQLVMSFWFPEVP--GIYWSAIFLGIMFGLNVISARGFGESEFWFAL 160
Cdd:PRK11357  83 aGSRPL----AFLSGWaSFWANDAPSLSIMALAIVSNLGFLTPIDPllGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  161 IKVVTVVIFIGVGLATIFGIMHGVESPGFSNFTmgdapfvGGFQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIA 240
Cdd:PRK11357 159 AKIIPFTIVIGLGIFWFKAENFAAPTTTAIGAT-------GSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRA 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  241 IRQVFWRILMFYILAIFVIGMLIPYtdpnllknDASDISVSPFTLLFER-AGFAAAAGVMNAVI-LSAILSAGNSGMYAS 318
Cdd:PRK11357 232 LIGSCLLVLVLYTLLALVISGLMPF--------DKLANSETPISDALTWiPALGSTAGIFVAITaMIVILGSLSSCVMYQ 303

                        330       340
                 ....*....|....*....|
gi 15599824  319 TRMLYNLALEGKAPRLFSRV 338
Cdd:PRK11357 304 PRLEYAMAKDNLFFKCFGHV 323
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 32-353 2.62e-07

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 52.83  E-value: 2.62e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824    32 TGLFVASGATVATAGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSRFVEDGFGFALGW-----NYWYNWA 106
Cdd:TIGR00907  31 TGISTTYNYGLSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPRQMPFASWmtgwfNLAGQVA 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   107 VTIAAELVAAQLVM---SFWFPEVPGIYWSAIFLGIMFGLNVISA----------RGFGESEFWFALIKVVTVVIFIGVG 173
Cdd:TIGR00907 111 GTASTDLSVAQLILgivSLTTPGREYIPTRWHIFGIMIGIHLIHAlinslptkwlPRITSSAAYWSLLGFLTICITLLAC 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   174 LATIFGIMHGVESpGFSNFTMGDAPfvGGFQAMVGVAMIAgFSFQGTELIGIAAGESENPRKNIPIAIRQVFwrILMFYI 253
Cdd:TIGR00907 191 KSPKFNDGKFVFT-NFNNSTGGWKP--GGFAFLLGLLNPA-WSMTGYDGTAHMAEEIENPEVVGPRAIIGAV--AIGIVT 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   254 LAIFVIGMLIPYTDPNLLKNDASDISVSpfTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALEGKAP- 332
Cdd:TIGR00907 265 GFCFNIVLFFSMGDIDSLISSTTGQPIA--QIFYNALGNKAGAIFLLCLILVTSFFCAITCMTANSRMIYAFSRDGGLPf 342

                         330       340
                  ....*....|....*....|...
gi 15599824   333 -RLFSRVS-RSGVPRNALYATTL 353
Cdd:TIGR00907 343 sPLWSRVNpRTQVPLNAVWLSAV 365
PRK10644 PRK10644
arginine/agmatine antiporter;
23-344 2.05e-03

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 40.54  E-value: 2.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   23 MIAiGGSIGTGLFV--ASGATVATAGPGGALLSY--ALIGLMVYflmtslGEMAAYMPVSGSFCTYGSRFVEDGFGFALG 98
Cdd:PRK10644  18 MVA-GNIMGSGVFLlpANLASTGGIAIYGWLVTIigALGLSMVY------AKMSSLDPSPGGSYAYARRCFGPFLGYQTN 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824   99 WNYWY-NWAVTIAAeLVAAQLVMSFWFPEVPGIYWSAI----FLGIMFGLNVISARGFGESEfwfaliKVVTVVIFIGVG 173
Cdd:PRK10644  91 VLYWLaCWIGNIAM-VVIGVGYLSYFFPILKDPLVLTItcvvVLWIFVLLNIVGPKMITRVQ------AVATVLALIPIV 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  174 LATIFGIMHgvespgFSNFTMGDAPFVGG---FQAMVGVAMIAGFSFQGTELIGIAAGESENPRKNIPIAIRQVFWRILM 250
Cdd:PRK10644 164 GIAVFGWFW------FRGETYMAAWNVSGlgtFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAV 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599824  251 FYILAIFVIGMLIPytdpnllkNDASDISVSPFTLLFERA---------GFAAAAGVMNAvILSAILSAGNSGMYASTRM 321
Cdd:PRK10644 238 CYVLSSTAIMGMIP--------NAALRVSASPFGDAARMAlgdtagaivSFCAAAGCLGS-LGGWTLLAGQTAKAAADDG 308

                        330       340
                 ....*....|....*....|...
gi 15599824  322 LYnlalegkaPRLFSRVSRSGVP 344
Cdd:PRK10644 309 LF--------PPIFARVNKAGTP 323
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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