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Conserved domains on  [gi|15829398|ref|NP_308171|]
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periplasmic pilin chaperone [Escherichia coli O157:H7 str. Sakai]

Protein Classification

fimbria/pilus periplasmic chaperone( domain architecture ID 11484525)

fimbria/pilus periplasmic chaperone, similar to Haemophilus sp. GhfB protein which is thought to confer upon the strain the ability to survive in the genital tract

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-241 2.88e-165

fimbrial chaperone;


:

Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 456.10  E-value: 2.88e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   81 PPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPK-DAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA 159
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  160 KITWKLNNAQ----LQANNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGNI 235
Cdd:PRK09926 161 ALKWSWAGSEgkasLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240


                 ....*.
gi 15829398  236 DGSATF 241
Cdd:PRK09926 241 EGNASL 246
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-241 2.88e-165

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 456.10  E-value: 2.88e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   81 PPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPK-DAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA 159
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  160 KITWKLNNAQ----LQANNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGNI 235
Cdd:PRK09926 161 ALKWSWAGSEgkasLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240


                 ....*.
gi 15829398  236 DGSATF 241
Cdd:PRK09926 241 EGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-241 5.40e-95

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 278.03  E-value: 5.40e-95
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   8 TVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVE 87
Cdd:COG3121   6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  88 PKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEaDKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNN 167
Cdd:COG3121  86 PGKSQTVRIIRTGPP-LPQDRESLFRLNVDEIPPKDASEE-GKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVG 163

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15829398 168 AQLQANNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGNIDGSATF 241
Cdd:COG3121 164 NGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-150 5.00e-56

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 174.70  E-value: 5.00e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    27 IIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVmYTGATALPK 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 15829398   107 DRESVYWFNVLEVPPKPKdAEADKNLLQLAFRTRIKLFYRPSGL 150
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDK-PKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-241 2.88e-165

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 456.10  E-value: 2.88e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   81 PPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPK-DAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA 159
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  160 KITWKLNNAQ----LQANNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGNI 235
Cdd:PRK09926 161 ALKWSWAGSEgkasLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240


                 ....*.
gi 15829398  236 DGSATF 241
Cdd:PRK09926 241 EGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-241 5.40e-95

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 278.03  E-value: 5.40e-95
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   8 TVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVE 87
Cdd:COG3121   6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  88 PKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEaDKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNN 167
Cdd:COG3121  86 PGKSQTVRIIRTGPP-LPQDRESLFRLNVDEIPPKDASEE-GKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVG 163

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15829398 168 AQLQANNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGNIDGSATF 241
Cdd:COG3121 164 NGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PRK15249 PRK15249
fimbrial chaperone;
12-235 3.51e-60

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 190.01  E-value: 3.51e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   12 LFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIK-VPFTATPPVSRVEPKR 90
Cdd:PRK15249  15 VFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSaMPFIATPPVFRIQPKA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   91 GQTVKVMYTGATALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLAFRTRIKLFYRPSGLqGEPAEAPAKITWK-LNNAQ 169
Cdd:PRK15249  95 GQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIKtVNKGS 173

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15829398  170 LQA----NNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFgvtSLPGSVS----SGKVVFKAINDFGGNI 235
Cdd:PRK15249 174 GKSgiviVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTW---WLPGKRSlksfSGTVTVTLVNDQGARI 244
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-150 5.00e-56

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 174.70  E-value: 5.00e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    27 IIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVmYTGATALPK 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 15829398   107 DRESVYWFNVLEVPPKPKdAEADKNLLQLAFRTRIKLFYRPSGL 150
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDK-PKGGQNGLQLALRSRIKLFYRPAGL 122
lfpB PRK15290
fimbrial chaperone;
7-232 6.42e-48

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 158.23  E-value: 6.42e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    7 KTVSALFVSTLLASAP-AFADIIISGTRIIYNADKKDVNVRLENKGNR-PLLIQNWLD--TGDDNADPsqikvPFTATPP 82
Cdd:PRK15290  18 KLFTAIILSVFLGQPAlTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDpfNKEDKSKA-----PFTVIPP 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   83 VSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPKDaeADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKIT 162
Cdd:PRK15290  93 VSRLEPSQEKVLRIIHTKGVSLPDDRESVFWLNIKNIPPSASN--KATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVK 170

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  163 WKLNNAQLQANNPTPYYVSFNEVKLESggktYNVNSSMVTPFSQASFgvtSLPGSVSSGKVVFKAINDFG 232
Cdd:PRK15290 171 WRREGRNLIAENPNPIHISVMDVIVDG----HDVPLNMIRPFETLTL---PLPANSAGGQMTWRFINDYG 233
PRK15208 PRK15208
molecular chaperone LpfB;
7-232 4.51e-44

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 148.13  E-value: 4.51e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    7 KTVSALFVSTLLASAPAFAD-IIISGTRIIYNADKKDVNVRLENKG-NRPLLIQNWLDTGDDNAdpsqiKVPFTATPPVS 84
Cdd:PRK15208   2 RLISFTALALALIAQNSFAGgVALSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSWIDDANGNK-----KTPFIITPPLF 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   85 RVEPKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEAdKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWK 164
Cdd:PRK15208  77 KLDPTKNNVLRIVNITNT-LPQDRESVYWINVKAIPAKSEDAEN-KNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFT 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15829398  165 LNNAQLQANNPTPYYVSFNEV-----KLESGGktynvnssMVTpfSQASFGVTSLPGSVSSGKVVFKAINDFG 232
Cdd:PRK15208 155 RAGNQIKVENPSAFNLTFNQFyangrDIEKAG--------MVP--AKGSLNIELPAGTGKVSEVKYNIINDFG 217
PRK15218 PRK15218
fimbrial assembly chaperone;
19-212 1.28e-41

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 141.66  E-value: 1.28e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   19 ASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMY 98
Cdd:PRK15218  12 AAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSGQQLKIKK 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   99 TgATALPKDRESVYWFNVLEVPPKpKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQLQANNPTPY 178
Cdd:PRK15218  92 L-ANNLPGDRESLFYLNVLDIPPN-SDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSISVKNNSAN 169

                        170       180       190
                 ....*....|....*....|....*....|....
gi 15829398  179 YVSFNEVKlesGGKTYNVNSSMVTPFSQASFGVT 212
Cdd:PRK15218 170 WITIPEIK---AKSKVNKETLLLAPWSSQSITTT 200
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 4-205 5.55e-41

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 140.57  E-value: 5.55e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    4 LVKKTVSALFVSTLLASA---PAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK15253   9 YKQGRVNMKILSAVLLSAiilPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLT 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   81 PPVSRVEPKRGQTVKVMYTgATALPKDRESVYWFNVLEVPPKPKDaEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAK 160
Cdd:PRK15253  89 PPVARVAAESGQQIKIKKM-PNSLPDNKESLFYLNVLDIPPNSQE-NAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQR 166

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 15829398  161 ITWKLNNAQLQANNPTPYYVSFNEVKleSGGKTYNVNSSMVTPFS 205
Cdd:PRK15253 167 IGLFRSNKTVIMKNDTANWITVTDVK--AGNTKINDQTIMLPPLS 209
PRK15295 PRK15295
fimbrial assembly chaperone;
14-232 7.96e-40

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 137.00  E-value: 7.96e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   14 VSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNadpSQIKVPFTATPPVSRVEPKRGQT 93
Cdd:PRK15295   8 LVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQ---VTNKQAFIITPPLFRLDAGQKNS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   94 VKVMYTGATaLPKDRESVYWFNVLEVPpkPKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA-KITWKLNNAQLQA 172
Cdd:PRK15295  85 IRVIRSGAP-LPADRESMYWLNIKGIP--SIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSqQLKWQTAGDVITV 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15829398  173 NNPTPYYVSFNEVKLESggktYNVNSS-MVTPFSQASFGVTslPGSVSSGKVVFKAINDFG 232
Cdd:PRK15295 162 NNPTPYYMNFASVTLNS----HEVKSAtFVPPKSSASFKLG--STAAPHGTVTWRLISDYG 216
PRK15211 PRK15211
fimbrial chaperone;
5-233 1.12e-38

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 134.18  E-value: 1.12e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    5 VKKTVSALfVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDtgddNADPSQIKVPFTATPPVS 84
Cdd:PRK15211   3 MMKWGLVS-LLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWID----NTTQGSSTVYMVPAPPFF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   85 RVEPKRGQTVKVMYTGaTALPKDRESVYWFNVLEVPPKPKDAEAdkNLLQLAFRTRIKLFYRPSGLQG--EPAEAPAKIT 162
Cdd:PRK15211  78 KVRPKEKQIIRIMKTD-SALPKDRESLFWLNVQEIPPKPKASEG--NVLAVALNTQVKLIYRPKALKEgrENAEKNLQII 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15829398  163 WKLNNAQLQanNPTPYYVSFNEVKLEsgGKTYNVNS------SMVTPFSQASFGVTSLPGSVSsgkvvFKAINDFGG 233
Cdd:PRK15211 155 HRGGETYLK--NPTPYYFAVTGVKLN--GQPVKLSDrvmneiAQLAPFSEVSLGKLSLNGTVT-----VQAVNDWGG 222
PRK15195 PRK15195
molecular chaperone FimC;
11-232 9.63e-38

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 131.52  E-value: 9.63e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   11 ALFVStllASAPAFADIIISGTRIIYNADKKDVNVRLENKG-NRPLLIQNWLDTgddnaDPSQIKVPFTATPPVSRVEPK 89
Cdd:PRK15195  14 YLIIS---ASVHAAGGIALGATRVIYPADAKQTSLAIRNSHtNERYLVNSWIEN-----SSGVKEKSFIVTPPLFVSEPK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   90 RGQTVKVMYTGAtALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQ 169
Cdd:PRK15195  86 SENTLRIIYAGP-PLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNH 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15829398  170 LQANNPTPYYVSFneVKLESGGKTynVNSSMVTPFSQASfgvTSLPGSVsSGKVVFKAINDFG 232
Cdd:PRK15195 165 LKVHNPSPYYVTL--VNLQVGSQK--LGNAMIAPKVNSQ---IPLPSGV-QGKLKFQTVNDYG 219
PRK15246 PRK15246
fimbrial assembly chaperone;
22-232 8.51e-37

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 129.31  E-value: 8.51e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   22 PAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGA 101
Cdd:PRK15246   7 PAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  102 TALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQLQANNPTPYYVS 181
Cdd:PRK15246  87 QQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYMS 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 15829398  182 FNeVKLESGGKTYNVnssMVTPFSQASFGVTSLPGSVSSgkVVFKAINDFG 232
Cdd:PRK15246 167 LT-LTMDNKKSIGDI---MVAPKTALDVPLTRSPTPGAS--INYAVINDSG 211
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 10-233 1.36e-36

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 128.74  E-value: 1.36e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   10 SALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQikVPFTATPPVSRVEPK 89
Cdd:PRK15299   7 AGLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASGD--APFMVTPPLFRLNGG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   90 RGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEadKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQ 169
Cdd:PRK15299  85 QKNVLRIIRTGGN-LPEDRESLYWLDIKSIPSSNPDNK--HNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRT 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15829398  170 LQANNPTPYYVSFNEVkleSGGKTYNVNSSMVTPFSQASFgvtSLPGSvSSGKVVFKAINDFGG 233
Cdd:PRK15299 162 LTVKNPTPYYMNFATL---SVGSQKVKAPRYVAPFGNAQY---TLPAA-ASGPIAWSIINDFGG 218
PRK11385 PRK11385
fimbrial chaperone;
14-233 1.57e-30

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 113.31  E-value: 1.57e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   14 VSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLD--TGDDNADPSQIKVPFTATPPVSRVEPKRG 91
Cdd:PRK11385  15 VLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrpTRWAGGEASTVPAPLLAAPPLILLKPGTT 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   92 QTVKVMYTGATALPKDRESVYWFNVLEVPpkpkDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQLQ 171
Cdd:PRK11385  95 GTLRLLRTESDILPVDRETLFELSIASVP----SGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQ 170

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15829398  172 ANNPTPYYVsfNEVKLESGGKTYNvNSSMVTPFSQASfgvTSLPGSVSSGKVVFKAINDFGG 233
Cdd:PRK11385 171 LTNPTPYYI--NLIQVSVNGKALS-NAGVVPPKSQRQ---TSWCQAIAPCHVAWRAINDYGG 226
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 5-233 6.31e-29

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 108.70  E-value: 6.31e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    5 VKKTVSALFVSTLLASAPAFA------DIIISGTRIIYNADKKDVNVRLENKGNRPL-LIQNWLDtgddNADPSQiKVPF 77
Cdd:PRK15188   1 MKKNVPIFLRLLLLLSAAGLSfaaqagGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVA----NADGSR-STDF 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   78 TATPPVSRVEPKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDaEADKNLLQLAFRTRIKLFYRPSGLQGEPAEA 157
Cdd:PRK15188  76 IITPPLFVIQPKKENILRIMYVGPS-LPTDRESVFYLNSKAIPSVDKN-KLTGNSLQIATQSVIKLFIRPKNLAEAPAHA 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15829398  158 PAKITWKLNNAQLQANNPTPYYVSFneVKLESGGKtyNVNSSMVTPfsqasFGVTSLPGsvSSGKVVFKAINDFGG 233
Cdd:PRK15188 154 PSTLRCRNERGQLTITNPSPYYVSM--VELYSAGK--KLPNTMVPP-----KGAITLPA--TPGQVSLRTVNDFGA 218
PRK15285 PRK15285
fimbrial chaperone StfD;
1-235 1.57e-28

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 108.33  E-value: 1.57e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNR-PLLIQNWLDtgddNADPSQIKVPFTA 79
Cdd:PRK15285   1 MMPLKRYNLAAVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVE----DEKGVKITSPLIV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   80 TPPVSRVEPKRGQTVKVMYTGATA-LPKDRESVYWFNVLEVPPkpkdaEADK-NLLQLAFRTRIKLFYRPSGLQGEPAEA 157
Cdd:PRK15285  77 VPPVQRIEPSAIGQVKIQGMPALAsLPQDRETLFYYNVREIPP-----QSDKpNTLQIALQTRIKVFYRPQALSKIDMQH 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  158 P--AKITWKLNNAQLQANNPTPYYVSF-NEVKLESGGKTYNVNSSMVTPFSQASFGVTSlpgSVSSGKVVFKAINDFGGN 234
Cdd:PRK15285 152 PwqYKITLQRQGNGYQVSNPTGYYVVLsNASNRMDGTPARGFSPLVIAPKSNVTLGGDA---SELGHSPVLTYVNDYGAR 228


                 .
gi 15829398  235 I 235
Cdd:PRK15285 229 L 229
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 13-234 2.23e-28

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 107.94  E-value: 2.23e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   13 FVSTLLASAP--AFADIIISGTRIIYNADKKDVNVRLEN-KGNRPLLIQNWLDTGDDNADPSQikvpFTATPPVSRVEPK 89
Cdd:PRK15274  12 LIASVLLAAPlvSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFAKDTRY----FTALPPLQRIEPK 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   90 RGQTVKVM-YTGATALPKDRESVYWFNVLEVPPKpkdaeADK-NLLQLAFRTRIKLFYRPSGLQGEPAEA---PAKITWK 164
Cdd:PRK15274  88 SDGQVKVQpLPAAASLPQDRESLFYFNVREIPPK-----SDKpNTLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLT 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  165 LNNAQLQANNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASfgvTSLPGSVSSGKVVFKAINDFGGN 234
Cdd:PRK15274 163 YQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVT---SPIKGASLGSSPVVGYVDDYGGH 229
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
17-232 6.82e-28

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 106.32  E-value: 6.82e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   17 LLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGD--DNADPSQIKVPFTATPPVSRVEPKRGQTV 94
Cdd:PRK15192  14 LLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGrwPGTKNEGNITPFVVTPPLFMLSARQENSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   95 KVMYTGAtALPKDRESVYWFNVLEVPPKPKDAeadkNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQLQANN 174
Cdd:PRK15192  94 RVVYTGA-PLPADRESLFTLSIAAIPSGKPEA----NRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRN 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 15829398  175 PTPYYVSFneVKLESGGKTYNvNSSMVTPFSQASfgvTSLPGSVSSGKVVFKAINDFG 232
Cdd:PRK15192 169 PTPYYVTL--FLLRANERAQD-NAGVVAPFATRQ---TDWCRHTVRCTVRWQSINDYG 220
PRK15224 PRK15224
pili assembly chaperone PapD;
9-233 1.00e-25

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 100.59  E-value: 1.00e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    9 VSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNAdpsqiKVPFTATPPVSRVEP 88
Cdd:PRK15224  12 TPVYAAEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS-----PAPFLVMPPLFRLEA 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   89 KRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPK--PKDAEADKNLL--QLAFRTRIKLFYRPSGLQGEPAEAPAKITWK 164
Cdd:PRK15224  87 NQQSQLRIVRTGGD-MPTDRETLQWVCIKAVPPEnePSDTQAKGATLdlNLSINVCDKLIFRPDAVKGTPEDVAGNLRWV 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15829398  165 LNNAQLQANNPTPYYVSFNEVKLesGGKTYnVNSSMVTPFSQASFgvtSLPGSvSSGKVVFKAINDFGG 233
Cdd:PRK15224 166 ETGNKLKVENPTPFYMNLASVTV--GGKPI-TGLEYIPPFADKTL---NMPGS-AHGDIEWRVITDFGG 227
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 17-181 7.03e-25

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 98.31  E-value: 7.03e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   17 LLASAPAF-----ADIIISGTRIIYNADKKDVNVRLENKG-NRPLLIQNWLDTGDDNADPSqikvpFTATPPVSRVEPKR 90
Cdd:PRK15254   3 LLALAAAWsqyspAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTDA-----LMALPPLQRIDAGQ 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   91 GQTVKVMYT-GAT-ALPKDRESVYWFNVLEVPPKPKdaeaDKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA-KITWKLNN 167
Cdd:PRK15254  78 KSQVRITQVrGLTdKLPQDRETLFWFNVRGVPPKPE----DDNVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNA 153

                        170
                 ....*....|....
gi 15829398  168 AQLQANNPTPYYVS 181
Cdd:PRK15254 154 GHLTLRNPTPYYIT 167
PRK15233 PRK15233
fimbrial chaperone SefB;
32-235 6.46e-19

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 82.46  E-value: 6.46e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   32 TRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNAdpsqiKVPFTATPPVSRVEPKRGQTVKVMYTgATALPKDRESV 111
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKSS-----KAPFIVTPPILKVESNARTRLKVIPT-SNLFNKNEESL 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398  112 YWFNVLEVPPKPKDAEADKNLLQLAFRTR------IKLFYRPSGLQGEPAEAPAKITWKLNNAQLQANNPTPYYVSFNEV 185
Cdd:PRK15233 121 YWLCVKGVPPLNDNESNNKNNITTNLNVNvvtnscIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIANI 200

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 15829398  186 KleSGGKTYNVNSSMVTPfsqasFGVTSLPGSVSSgKVVFKAINDFGGNI 235
Cdd:PRK15233 201 K--SGNLSFNIPNGYIEP-----FGYAQLPGGVHS-KITLTILDDNGAEI 242
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 173-236 1.26e-17

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 74.22  E-value: 1.26e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15829398   173 NNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGsvSSGKVVFKAINDFGGNID 236
Cdd:pfam02753   2 KNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFAGLPAPA--AGGTVSYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 6-224 8.40e-10

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 56.97  E-value: 8.40e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398    6 KKTVSALFVSTLLASAPA---FADIIISGTRIIYNADKKDVNVRLENKGNRP-LLIQNWLDTGDDNAdpsqikVPFTATP 81
Cdd:PRK09918   2 RFNLFFLFTALVLLSSSSavhAAGMVPETSVVIVEESDGEGSINVKNTDSNPiLLYTTLVDLPEDKS------KLLLVTP 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829398   82 PVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNvlEVPPKPKdaeaDKNLLQLAFRTRIKLFYRPSGLQGEpaEAPAK- 160
Cdd:PRK09918  76 PVARVEPGQSQQVRFILKSGSPLNTEHLLRVSFE--GVPPKPG----GKNKVVMPIRQDLPVLIQPAALPVV--RDPWKl 147

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15829398  161 ITWKLNNAQLQANNPTPYYVSFNE-VKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVV 224
Cdd:PRK09918 148 LVWSISGNNLVVSNPSPYVVRLGQqVILLPSGKVVALPKPYILPGESLTVAITNSKATDTKVRFF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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