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type VI secretion system protein ImpL [Escherichia coli O157:H7 str. Sakai]
Protein Classification
type VI secretion system membrane subunit ( domain architecture ID 11466348 )
type VI secretion system membrane subunit such as the IcmF (intracellular multiplication protein F) family protein that exhibits ATPase activity and energizes type VI secretion; it is a conserved T6SS inner membrane protein
List of domain hits
Name
Accession
Description
Interval
E-value
IcmF
COG3523 Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and ...
1-1143
0e+00
Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442745 [Multi-domain]
Cd Length: 1192
Bit Score: 1027.20
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 1 MLI L AWIF L LVW IW WK GP TWTLYEEQW L KPLAN R W LA T A AWGIIA L VWLT VR VMKRLQLLEKQQKQQR E E A I ----- DP L 75
Cdd:COG3523 12 LSL L GLLA L ALL IW FG GP LLAIGDYRP L ESVLV R L LA I A VILLLW L LVWL VR RWRARRANRALEDALA E Q A E ekaaa DP S 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 76 SV E LN A QQRYLDRW L LR L QRHL ---- DN RR F L WQ LPWY MV IGP A G S GKTT L L REG --- FP SDIIYAPEGA RG TEQRLYLT 148
Cdd:COG3523 92 RE E IE A LRERFQEA L AT L KKSR lgqg GG RR A L YE LPWY LI IGP P G A GKTT A L VNS glk FP LADKFGKAAI RG VGGTRNCD 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 149 PHVGKQ AV IF D ID G TLCAPADADILH R RL W EHA L GW LK EK R A RQP L NG I I LTLD L P DLLT ADKRH RE HLLQT LR S RLQ DI 228
Cdd:COG3523 172 WWFTDE AV LI D TA G RYTTQDSDAEVD R AE W LGF L DL LK KH R P RQP I NG V I VAIS L A DLLT QSPEE RE QHAKA LR Q RLQ EL 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 229 R QH L HCQL PVYV VL T RL DLL Q GF AAL F QS L NRQD R DAIL G V TF TRRAHEND D WRT E LN A FWQTWVD R M N LA L P D LMVTQT 308
Cdd:COG3523 252 R ER L GIRF PVYV LF T KA DLL A GF SEF F AD L DKEE R EQVW G F TF PYDEKQEF D LLA E FD A EFDELLE R L N ER L L D RLQQER 331
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 309 -- HT RA SL F S F SR Q MQGSR E P L VSL LE G L LDGEN -- MNVM LRGVY L TS SL Q R G QMD D IFTQSA AR QYR L GNNP L ASWP l V 384
Cdd:COG3523 332 dp ER RA LI F G F PQ Q FAALK E A L AEF LE E L FEPNR yq TPPL LRGVY F TS GT Q E G TPI D RVMGAL AR NFG L SRAA L PAQS - G 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 385 DTAP YF TRS LF PQALLA E PN LA TES R A W LM R S R RRLTVFS A TGGV A A L L L IT GW HHY Y NG N YQSGIT V LKQAK A FMDVPP 464
Cdd:COG3523 411 SGRS YF LKD LF SKVIFP E AG LA GRN R R W ER R R R WLRRAAY A AAAL A L L G L LG GW TWS Y LN N RRLLAE V EAKVD A YRALAA 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 465 PQGED D - YGNLQ LP L LN PV RD ATLA YG DWG D RSR L - A DM GLYQG RRI GP YVEQT YL QL LEQ RY LP S L FNG L VKAMNA AP P 542
Cdd:COG3523 491 ALLVA D t DLAAL LP A LN AL RD LPAG YG YRR D DPP L s A GL GLYQG DKL GP AARAA YL RA LEQ LL LP R L ALR L EEQLRQ AP A 570
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 543 ES EE KLAV L RVMR ML E D KSG R NNEVV K QY MA KR W S E KFH G Q -- RDIQ A Q L MS HLD YA L AH tdwhaerqa G DGDAISRWTP 620
Cdd:COG3523 571 DP EE LYEA L KAYL ML G D PEH R DADFL K AW MA RD W R E LLP G N tr AELR A A L ER HLD AL L DL --------- G GDPSAPPLPL 641
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 621 YDKP V VS A QK EL SKL P VY QRVY QS LK T RAL GVLPA D LN L R D Q VGP TFDQ VFT SADDN -- K L VV P QFL TR Y G LQSY F VKQR 698
Cdd:COG3523 642 DEAL V AQ A RA EL RRV P LA QRVY AR LK A RAL ATRLP D FT L A D A VGP QAAL VFT RSSGK pl T L GI P GLF TR E G YHEV F LPAI 721
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 699 DEL V E LT A M D S WVL N L TRSVKY S D ADR AEI QR QLTEQ Y IS DY T A T WRA GMDN L NIRN F E S IG Q LTG AL EQVI S G D Q PL Q R 778
Cdd:COG3523 722 DEL A E EL A R D D WVL G L SAEDDL S E ADR EQL QR EVRQL Y LA DY I A E WRA FLGD L RLAP F T S LA Q AIA AL RVLS S P D S PL R R 801
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 779 A L TVLR D N T QPGVF SE KLSAKERD -------- EA L AEPDYQ L L ---------------- TRLGHE FAP ENITLAVQKDKE 834
Cdd:COG3523 802 L L RAVA D E T TLTRP SE AAAGGAAA kgllaaak AR L LSARGR L G rllgadaaaaaaqvpg QPVDRH FAP LHRLVEANDGGP 881
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 835 STMQAVY Q Q L T EL HR YL L AI Q NAP V PGK S ALK AVQ lr LDQNS SD P I F A TRQM A KT LP A PL N RW V G R L T DQAW H VV MVE A V 914
Cdd:COG3523 882 APLDDYL Q A L N EL YT YL T AI A NAP D PGK A ALK LAK -- ASGGG SD L I S A LKAE A GR LP E PL R RW L G S L A DQAW S VV LGG A R 959
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 915 HYMEVD WR DS V VKPFNEQL A NN YPF N PRS AQ D AS L DA F E RFF K P D GILD T F Y QQNLK L F I D --- NDLSLEDG D NNVI - IR 990
Cdd:COG3523 960 AHLNRR WR AE V YPFCRQAI A GR YPF A PRS SR D VA L AD F A RFF G P G GILD S F F QQNLK P F V D tsg RPWRFRPW D GQGL g LS 1039
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 991 EDII AQ LET A QK IRD I FF S - KQNGLGTS F AVET VSL SGNKR R SV L NL DGQL VD Y SQ G RNYTAHL VWP NNM r EG N ESKL TL 1069
Cdd:COG3523 1040 PAVL AQ FQR A AA IRD A FF A g GGAEPSVR F QIKP VSL DPGIS R FT L EI DGQL LR Y RH G PQRPVSV VWP GPG - GS N GARI TL 1118
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1447699269 1070 IGTS G NA P R S I S FS GPWA Q FRL FGAG QLT G V QDGN FTV R F S VDG GAM TY RVHT D TED NPF SGG L FSQ F GLSDT L 1143
Cdd:COG3523 1119 TPLD G TS P S S L S YE GPWA L FRL LDKA QLT T V SPDS FTV T F T VDG RSV TY ELRA D SVN NPF ALP L LRG F RCPES L 1192
Name
Accession
Description
Interval
E-value
IcmF
COG3523 Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and ...
1-1143
0e+00
Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442745 [Multi-domain]
Cd Length: 1192
Bit Score: 1027.20
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 1 MLI L AWIF L LVW IW WK GP TWTLYEEQW L KPLAN R W LA T A AWGIIA L VWLT VR VMKRLQLLEKQQKQQR E E A I ----- DP L 75
Cdd:COG3523 12 LSL L GLLA L ALL IW FG GP LLAIGDYRP L ESVLV R L LA I A VILLLW L LVWL VR RWRARRANRALEDALA E Q A E ekaaa DP S 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 76 SV E LN A QQRYLDRW L LR L QRHL ---- DN RR F L WQ LPWY MV IGP A G S GKTT L L REG --- FP SDIIYAPEGA RG TEQRLYLT 148
Cdd:COG3523 92 RE E IE A LRERFQEA L AT L KKSR lgqg GG RR A L YE LPWY LI IGP P G A GKTT A L VNS glk FP LADKFGKAAI RG VGGTRNCD 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 149 PHVGKQ AV IF D ID G TLCAPADADILH R RL W EHA L GW LK EK R A RQP L NG I I LTLD L P DLLT ADKRH RE HLLQT LR S RLQ DI 228
Cdd:COG3523 172 WWFTDE AV LI D TA G RYTTQDSDAEVD R AE W LGF L DL LK KH R P RQP I NG V I VAIS L A DLLT QSPEE RE QHAKA LR Q RLQ EL 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 229 R QH L HCQL PVYV VL T RL DLL Q GF AAL F QS L NRQD R DAIL G V TF TRRAHEND D WRT E LN A FWQTWVD R M N LA L P D LMVTQT 308
Cdd:COG3523 252 R ER L GIRF PVYV LF T KA DLL A GF SEF F AD L DKEE R EQVW G F TF PYDEKQEF D LLA E FD A EFDELLE R L N ER L L D RLQQER 331
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 309 -- HT RA SL F S F SR Q MQGSR E P L VSL LE G L LDGEN -- MNVM LRGVY L TS SL Q R G QMD D IFTQSA AR QYR L GNNP L ASWP l V 384
Cdd:COG3523 332 dp ER RA LI F G F PQ Q FAALK E A L AEF LE E L FEPNR yq TPPL LRGVY F TS GT Q E G TPI D RVMGAL AR NFG L SRAA L PAQS - G 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 385 DTAP YF TRS LF PQALLA E PN LA TES R A W LM R S R RRLTVFS A TGGV A A L L L IT GW HHY Y NG N YQSGIT V LKQAK A FMDVPP 464
Cdd:COG3523 411 SGRS YF LKD LF SKVIFP E AG LA GRN R R W ER R R R WLRRAAY A AAAL A L L G L LG GW TWS Y LN N RRLLAE V EAKVD A YRALAA 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 465 PQGED D - YGNLQ LP L LN PV RD ATLA YG DWG D RSR L - A DM GLYQG RRI GP YVEQT YL QL LEQ RY LP S L FNG L VKAMNA AP P 542
Cdd:COG3523 491 ALLVA D t DLAAL LP A LN AL RD LPAG YG YRR D DPP L s A GL GLYQG DKL GP AARAA YL RA LEQ LL LP R L ALR L EEQLRQ AP A 570
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 543 ES EE KLAV L RVMR ML E D KSG R NNEVV K QY MA KR W S E KFH G Q -- RDIQ A Q L MS HLD YA L AH tdwhaerqa G DGDAISRWTP 620
Cdd:COG3523 571 DP EE LYEA L KAYL ML G D PEH R DADFL K AW MA RD W R E LLP G N tr AELR A A L ER HLD AL L DL --------- G GDPSAPPLPL 641
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 621 YDKP V VS A QK EL SKL P VY QRVY QS LK T RAL GVLPA D LN L R D Q VGP TFDQ VFT SADDN -- K L VV P QFL TR Y G LQSY F VKQR 698
Cdd:COG3523 642 DEAL V AQ A RA EL RRV P LA QRVY AR LK A RAL ATRLP D FT L A D A VGP QAAL VFT RSSGK pl T L GI P GLF TR E G YHEV F LPAI 721
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 699 DEL V E LT A M D S WVL N L TRSVKY S D ADR AEI QR QLTEQ Y IS DY T A T WRA GMDN L NIRN F E S IG Q LTG AL EQVI S G D Q PL Q R 778
Cdd:COG3523 722 DEL A E EL A R D D WVL G L SAEDDL S E ADR EQL QR EVRQL Y LA DY I A E WRA FLGD L RLAP F T S LA Q AIA AL RVLS S P D S PL R R 801
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 779 A L TVLR D N T QPGVF SE KLSAKERD -------- EA L AEPDYQ L L ---------------- TRLGHE FAP ENITLAVQKDKE 834
Cdd:COG3523 802 L L RAVA D E T TLTRP SE AAAGGAAA kgllaaak AR L LSARGR L G rllgadaaaaaaqvpg QPVDRH FAP LHRLVEANDGGP 881
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 835 STMQAVY Q Q L T EL HR YL L AI Q NAP V PGK S ALK AVQ lr LDQNS SD P I F A TRQM A KT LP A PL N RW V G R L T DQAW H VV MVE A V 914
Cdd:COG3523 882 APLDDYL Q A L N EL YT YL T AI A NAP D PGK A ALK LAK -- ASGGG SD L I S A LKAE A GR LP E PL R RW L G S L A DQAW S VV LGG A R 959
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 915 HYMEVD WR DS V VKPFNEQL A NN YPF N PRS AQ D AS L DA F E RFF K P D GILD T F Y QQNLK L F I D --- NDLSLEDG D NNVI - IR 990
Cdd:COG3523 960 AHLNRR WR AE V YPFCRQAI A GR YPF A PRS SR D VA L AD F A RFF G P G GILD S F F QQNLK P F V D tsg RPWRFRPW D GQGL g LS 1039
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 991 EDII AQ LET A QK IRD I FF S - KQNGLGTS F AVET VSL SGNKR R SV L NL DGQL VD Y SQ G RNYTAHL VWP NNM r EG N ESKL TL 1069
Cdd:COG3523 1040 PAVL AQ FQR A AA IRD A FF A g GGAEPSVR F QIKP VSL DPGIS R FT L EI DGQL LR Y RH G PQRPVSV VWP GPG - GS N GARI TL 1118
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1447699269 1070 IGTS G NA P R S I S FS GPWA Q FRL FGAG QLT G V QDGN FTV R F S VDG GAM TY RVHT D TED NPF SGG L FSQ F GLSDT L 1143
Cdd:COG3523 1119 TPLD G TS P S S L S YE GPWA L FRL LDKA QLT T V SPDS FTV T F T VDG RSV TY ELRA D SVN NPF ALP L LRG F RCPES L 1192
VI_IcmF
TIGR03348 type VI secretion protein IcmF; Members of this protein family are IcmF homologs and tend to ...
2-1141
0e+00
type VI secretion protein IcmF; Members of this protein family are IcmF homologs and tend to be associated with type VI secretion systems. [Cellular processes, Pathogenesis]
Pssm-ID: 274531 [Multi-domain]
Cd Length: 1169
Bit Score: 888.61
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 2 LI L AW I F L LVW IWW K GP TWTLYEEQW L KPLAN R W L AT A AWGIIA L V WL TV R VMK - R LQLLEKQQKQQREEAIDPLSV --- 77
Cdd:TIGR03348 2 SL L GL I L L CIL IWW A GP LLAVGDYKP L ESVWA R L L II A VLLLVW L L WL LI R QWR a R RRNQQLLAALAAPTKLKADAA aea 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 78 E LNAQQRYLDRW L LR L Q R H - L DN RR F L WQ LPWY M VIGP A GSGKTTLL REG --- FP ------ SDIIYAPE G A R GTEQRL yl 147
Cdd:TIGR03348 82 E IRELRARFNEA L AL L K R S r L GG RR Y L YD LPWY L VIGP P GSGKTTLL QNS glk FP laerlg AAALRGVG G T R NCDWWF -- 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 148 tphv GKQ AV IF D ID G TLCAPADADILHRRL W EHA LG W L KEK R A RQPLNG IIL T LD L P DLLTAD KRH R EHLLQTL R S RLQ D 227
Cdd:TIGR03348 160 ---- TDE AV LI D TA G RYTTQDSDPEEDAAA W LGF LG L L RKH R R RQPLNG VVV T VS L A DLLTAD PAE R KAHARAI R Q RLQ E 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 228 I R QH L HCQL PVY V VLT RL DLL Q GF AAL F QS L NRQD R DAIL G V TF TRRAHEN D DWRT E LN A FWQTWVD R M N LA L PDLMVTQ 307
Cdd:TIGR03348 236 L R EQ L GARF PVY L VLT KA DLL A GF EEF F AD L DAEE R EQVW G F TF PLDEADD D NAAE E FA A EFEGLLQ R L N AR L LERLHQE 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 308 THT -- RA SL F S F SR Q MQGSREP LV SL LE GLLDGENM -- NVM LRGVY L TS SL Q R G QMD D IFTQSA AR QYR L gn N P LASWPL 383
Cdd:TIGR03348 316 RDA ar RA AI F R F PA Q LAALKDR LV QF LE EAFAANRY ee APL LRGVY F TS AT Q E G TPI D RLLGAL AR GFG L -- S P GPPAAA 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 384 VDTA - P YF TRS LF PQALLA E PN LA TES R AWLM R S R RRLTVFS A TGGV AAL L L ITG W HHY Y NG N YQSGIT V LK Q AK A FMDV 462
Cdd:TIGR03348 394 RGEG r S YF LKD LF KEVIFP E AG LA GLN R RAER R R R WLRRGAY A AAAL AAL G L LGL W SLS Y LA N RDYLDE V RT Q LE A YRAL 473
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 463 PPPQG - EDDYGNLQ LP L L NPV RDA T L AY G DWGDRSR L - A DM GLYQG RRI G PY V EQ TYL QL L EQRY LP S L FNG L VKAMN A A 540
Cdd:TIGR03348 474 AQAIP a APADVLAL LP A L DAL RDA P L GF G NYDEAPP L l A RF GLYQG DKL G EA V RE TYL RA L QAVL LP R L MQR L EAQLQ A Q 553
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 541 PPES EE KLAV L R V MR ML E D K S G R NNEV VK QYM A K RW SEKFH G -- QR DIQAQ L MS HL DYA L ahtdwhaerq AG D G DA ISRW 618
Cdd:TIGR03348 554 EQDP EE LYET L K V YL ML G D P S R R DADF VK AWF A S RW EQQYP G ey QR ELREA L LG HL RAL L ---------- SL D Q DA VPAF 623
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 619 TPY D KP V VS A QK EL SKL P VY QRVYQ S LK TRA L GVLPA DL N L R D QV GP TF D Q VF TSADDNK L -- VV P QFL TR Y G LQSY F VK 696
Cdd:TIGR03348 624 PLD D AL V EQ A RA EL RAI P LA QRVYQ R LK LQP L DAALP DL S L A D AL GP QA D L VF ERRSGKP L sl GI P GLY TR A G YHDV F LP 703
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 697 Q RDE LVE LTAM D S WVL N - LTRSVKY S D ADR AEIQ R QLTEQ Y IS DY TAT W R A GMDN L NIRN FES IG Q LTGALEQVI S G D Q P 775
Cdd:TIGR03348 704 Q IAN LVE RALE D A WVL G g ASGNSQL S E ADR QALA R EVRKL Y FA DY INQ W D A LLND L RLKP FES LA Q AAALARALA S P D S P 783
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 776 L Q R A L TVLRDN T QPGVFSEKLS -------------- A KERDEA L AEPDY ----- QLLTRLGHE F A P ENIT LA VQKDKEST 836
Cdd:TIGR03348 784 L A R L L RAVARE T RLTPVDGAPA dggsnaaakklsgl A SALGAQ L LPAAP gaaal PEPGAVERH F E P LRRL LA PNGGPGAA 863
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 837 MQ A VYQQ L T EL HRY L L A IQNA P V PG KS ALKA VQ lrld QNSS D PIF A T RQ M A KT LP A PL NR W V G R L TDQA W HV V MVE A VHY 916
Cdd:TIGR03348 864 LD A LLAA L N EL YQQ L Q A LAAS P N PG QA ALKA RM ---- SGLA D ALS A L RQ A A AR LP E PL RG W L G S L AADT W KL V LQA A RSH 939
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 917 MEVD W RDS V VKPFNEQL A NN YPF N P R S AQ D AS L DA FERFF K P D G I LD T F Y QQNL KL F I D --- N DLSLED GD NNVI - I RED 992
Cdd:TIGR03348 940 LNAR W QSE V YSFCQQAI A GR YPF S P N S SK D VP L AD FERFF G P G G L LD S F F QQNL AP F V D tsa N PWRWKG GD GGSL g I SPS 1019
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 993 II AQ LET A QK IRD I FF - S KQNGLGT SF AVETV SL SG N K RR S VL NL DGQ LVD Y SQ G RNYTAH L V WP NNM r E G NESK LTL IG 1071
Cdd:TIGR03348 1020 VL AQ FQR A AR IRD A FF r S GGGEPAV SF TLKPI SL DP N I RR F VL EV DGQ TLR Y AH G PTRPVS L T WP GPN - D G GLAR LTL KP 1098
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1447699269 1072 TS G NA PR SIS FSGPWA Q FRL FG AG Q LT GVQDGN - FTV RF S V D GGA MT Y RVHTDTE DNPF SG GL F S Q F GLSD 1141
Cdd:TIGR03348 1099 AD G GS PR TLT FSGPWA L FRL LD AG R LT RTGSRD r LDL RF D V G GGA VR Y ELRAGSA DNPF TS GL L S G F RCPG 1169
IcmF-related
pfam06761 Intracellular multiplication and human macrophage-killing; This family represents a conserved ...
476-788
6.35e-72
Intracellular multiplication and human macrophage-killing; This family represents a conserved region within several bacterial proteins that resemble IcmF, which has been proposed to be involved in Vibrio cholerae cell surface reorganization, resulting in increased adherence to epithelial cells and increased conjugation frequency. Note that many family members are hypothetical proteins.
Pssm-ID: 429106 [Multi-domain]
Cd Length: 305
Bit Score: 241.86
E-value: 6.35e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 476 LP L L NPV RD ATLA -- YGDWGDRSRLADM GLYQG RRI G PYVEQT Y LQL L E Q RY LP S L FNG L VKAMN A - A P P ES E EKLAV L R 552
Cdd:pfam06761 1 LP A L DAL RD LPEG ll DYYQEGPPLSYRF GLYQG DKL G AAARAA Y RRA L R Q LL LP R L AQR L EAQLR A l A G P DP E ALYEA L K 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 553 VMR ML E D KSG R NNEVVKQYMAKR W SEKFH GQ RDI Q -- AQ L MS HLD YA LA H tdwh AERQAG D GDAISR wtpydkpvvs A QK 630
Cdd:pfam06761 81 AYL ML G D PER R DAAFLAAWLTRD W ERALP GQ ATG Q qr EA L LA HLD AL LA D ---- PPAIPP D AALVAQ ---------- A RA 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 631 E L SKL P VYQ RVYQ S LK TR AL GVLPA D LN L R D Q VGP TFDQ VFT SADDNK L -- V VP QFL TR Y G LQS YF VKQR DEL V EL TAMD 708
Cdd:pfam06761 147 T L ARV P LAE RVYQ R LK RQ AL ASALP D FT L A D A VGP DAAL VFT RSSGKP L se G VP GLF TR A G YHG YF LPAL DEL A EL LLEE 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 709 S WVL NLTRSVKY s D AD RAEIQRQ L T E Q Y IS DY T A T W R A GMDN L NIRN F E S IG Q LTGA L EQVISG D Q PL Q R A L TVLR D N T Q 788
Cdd:pfam06761 227 D WVL GDLAASAL - E AD PEQLADD L R E L Y FT DY A A A W Q A FLND L RLVP F A S LA Q AIDV L RLLADP D S PL L R L L QAVA D E T T 305
Name
Accession
Description
Interval
E-value
IcmF
COG3523 Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and ...
1-1143
0e+00
Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442745 [Multi-domain]
Cd Length: 1192
Bit Score: 1027.20
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 1 MLI L AWIF L LVW IW WK GP TWTLYEEQW L KPLAN R W LA T A AWGIIA L VWLT VR VMKRLQLLEKQQKQQR E E A I ----- DP L 75
Cdd:COG3523 12 LSL L GLLA L ALL IW FG GP LLAIGDYRP L ESVLV R L LA I A VILLLW L LVWL VR RWRARRANRALEDALA E Q A E ekaaa DP S 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 76 SV E LN A QQRYLDRW L LR L QRHL ---- DN RR F L WQ LPWY MV IGP A G S GKTT L L REG --- FP SDIIYAPEGA RG TEQRLYLT 148
Cdd:COG3523 92 RE E IE A LRERFQEA L AT L KKSR lgqg GG RR A L YE LPWY LI IGP P G A GKTT A L VNS glk FP LADKFGKAAI RG VGGTRNCD 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 149 PHVGKQ AV IF D ID G TLCAPADADILH R RL W EHA L GW LK EK R A RQP L NG I I LTLD L P DLLT ADKRH RE HLLQT LR S RLQ DI 228
Cdd:COG3523 172 WWFTDE AV LI D TA G RYTTQDSDAEVD R AE W LGF L DL LK KH R P RQP I NG V I VAIS L A DLLT QSPEE RE QHAKA LR Q RLQ EL 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 229 R QH L HCQL PVYV VL T RL DLL Q GF AAL F QS L NRQD R DAIL G V TF TRRAHEND D WRT E LN A FWQTWVD R M N LA L P D LMVTQT 308
Cdd:COG3523 252 R ER L GIRF PVYV LF T KA DLL A GF SEF F AD L DKEE R EQVW G F TF PYDEKQEF D LLA E FD A EFDELLE R L N ER L L D RLQQER 331
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 309 -- HT RA SL F S F SR Q MQGSR E P L VSL LE G L LDGEN -- MNVM LRGVY L TS SL Q R G QMD D IFTQSA AR QYR L GNNP L ASWP l V 384
Cdd:COG3523 332 dp ER RA LI F G F PQ Q FAALK E A L AEF LE E L FEPNR yq TPPL LRGVY F TS GT Q E G TPI D RVMGAL AR NFG L SRAA L PAQS - G 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 385 DTAP YF TRS LF PQALLA E PN LA TES R A W LM R S R RRLTVFS A TGGV A A L L L IT GW HHY Y NG N YQSGIT V LKQAK A FMDVPP 464
Cdd:COG3523 411 SGRS YF LKD LF SKVIFP E AG LA GRN R R W ER R R R WLRRAAY A AAAL A L L G L LG GW TWS Y LN N RRLLAE V EAKVD A YRALAA 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 465 PQGED D - YGNLQ LP L LN PV RD ATLA YG DWG D RSR L - A DM GLYQG RRI GP YVEQT YL QL LEQ RY LP S L FNG L VKAMNA AP P 542
Cdd:COG3523 491 ALLVA D t DLAAL LP A LN AL RD LPAG YG YRR D DPP L s A GL GLYQG DKL GP AARAA YL RA LEQ LL LP R L ALR L EEQLRQ AP A 570
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 543 ES EE KLAV L RVMR ML E D KSG R NNEVV K QY MA KR W S E KFH G Q -- RDIQ A Q L MS HLD YA L AH tdwhaerqa G DGDAISRWTP 620
Cdd:COG3523 571 DP EE LYEA L KAYL ML G D PEH R DADFL K AW MA RD W R E LLP G N tr AELR A A L ER HLD AL L DL --------- G GDPSAPPLPL 641
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 621 YDKP V VS A QK EL SKL P VY QRVY QS LK T RAL GVLPA D LN L R D Q VGP TFDQ VFT SADDN -- K L VV P QFL TR Y G LQSY F VKQR 698
Cdd:COG3523 642 DEAL V AQ A RA EL RRV P LA QRVY AR LK A RAL ATRLP D FT L A D A VGP QAAL VFT RSSGK pl T L GI P GLF TR E G YHEV F LPAI 721
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 699 DEL V E LT A M D S WVL N L TRSVKY S D ADR AEI QR QLTEQ Y IS DY T A T WRA GMDN L NIRN F E S IG Q LTG AL EQVI S G D Q PL Q R 778
Cdd:COG3523 722 DEL A E EL A R D D WVL G L SAEDDL S E ADR EQL QR EVRQL Y LA DY I A E WRA FLGD L RLAP F T S LA Q AIA AL RVLS S P D S PL R R 801
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 779 A L TVLR D N T QPGVF SE KLSAKERD -------- EA L AEPDYQ L L ---------------- TRLGHE FAP ENITLAVQKDKE 834
Cdd:COG3523 802 L L RAVA D E T TLTRP SE AAAGGAAA kgllaaak AR L LSARGR L G rllgadaaaaaaqvpg QPVDRH FAP LHRLVEANDGGP 881
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 835 STMQAVY Q Q L T EL HR YL L AI Q NAP V PGK S ALK AVQ lr LDQNS SD P I F A TRQM A KT LP A PL N RW V G R L T DQAW H VV MVE A V 914
Cdd:COG3523 882 APLDDYL Q A L N EL YT YL T AI A NAP D PGK A ALK LAK -- ASGGG SD L I S A LKAE A GR LP E PL R RW L G S L A DQAW S VV LGG A R 959
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 915 HYMEVD WR DS V VKPFNEQL A NN YPF N PRS AQ D AS L DA F E RFF K P D GILD T F Y QQNLK L F I D --- NDLSLEDG D NNVI - IR 990
Cdd:COG3523 960 AHLNRR WR AE V YPFCRQAI A GR YPF A PRS SR D VA L AD F A RFF G P G GILD S F F QQNLK P F V D tsg RPWRFRPW D GQGL g LS 1039
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 991 EDII AQ LET A QK IRD I FF S - KQNGLGTS F AVET VSL SGNKR R SV L NL DGQL VD Y SQ G RNYTAHL VWP NNM r EG N ESKL TL 1069
Cdd:COG3523 1040 PAVL AQ FQR A AA IRD A FF A g GGAEPSVR F QIKP VSL DPGIS R FT L EI DGQL LR Y RH G PQRPVSV VWP GPG - GS N GARI TL 1118
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1447699269 1070 IGTS G NA P R S I S FS GPWA Q FRL FGAG QLT G V QDGN FTV R F S VDG GAM TY RVHT D TED NPF SGG L FSQ F GLSDT L 1143
Cdd:COG3523 1119 TPLD G TS P S S L S YE GPWA L FRL LDKA QLT T V SPDS FTV T F T VDG RSV TY ELRA D SVN NPF ALP L LRG F RCPES L 1192
VI_IcmF
TIGR03348 type VI secretion protein IcmF; Members of this protein family are IcmF homologs and tend to ...
2-1141
0e+00
type VI secretion protein IcmF; Members of this protein family are IcmF homologs and tend to be associated with type VI secretion systems. [Cellular processes, Pathogenesis]
Pssm-ID: 274531 [Multi-domain]
Cd Length: 1169
Bit Score: 888.61
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 2 LI L AW I F L LVW IWW K GP TWTLYEEQW L KPLAN R W L AT A AWGIIA L V WL TV R VMK - R LQLLEKQQKQQREEAIDPLSV --- 77
Cdd:TIGR03348 2 SL L GL I L L CIL IWW A GP LLAVGDYKP L ESVWA R L L II A VLLLVW L L WL LI R QWR a R RRNQQLLAALAAPTKLKADAA aea 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 78 E LNAQQRYLDRW L LR L Q R H - L DN RR F L WQ LPWY M VIGP A GSGKTTLL REG --- FP ------ SDIIYAPE G A R GTEQRL yl 147
Cdd:TIGR03348 82 E IRELRARFNEA L AL L K R S r L GG RR Y L YD LPWY L VIGP P GSGKTTLL QNS glk FP laerlg AAALRGVG G T R NCDWWF -- 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 148 tphv GKQ AV IF D ID G TLCAPADADILHRRL W EHA LG W L KEK R A RQPLNG IIL T LD L P DLLTAD KRH R EHLLQTL R S RLQ D 227
Cdd:TIGR03348 160 ---- TDE AV LI D TA G RYTTQDSDPEEDAAA W LGF LG L L RKH R R RQPLNG VVV T VS L A DLLTAD PAE R KAHARAI R Q RLQ E 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 228 I R QH L HCQL PVY V VLT RL DLL Q GF AAL F QS L NRQD R DAIL G V TF TRRAHEN D DWRT E LN A FWQTWVD R M N LA L PDLMVTQ 307
Cdd:TIGR03348 236 L R EQ L GARF PVY L VLT KA DLL A GF EEF F AD L DAEE R EQVW G F TF PLDEADD D NAAE E FA A EFEGLLQ R L N AR L LERLHQE 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 308 THT -- RA SL F S F SR Q MQGSREP LV SL LE GLLDGENM -- NVM LRGVY L TS SL Q R G QMD D IFTQSA AR QYR L gn N P LASWPL 383
Cdd:TIGR03348 316 RDA ar RA AI F R F PA Q LAALKDR LV QF LE EAFAANRY ee APL LRGVY F TS AT Q E G TPI D RLLGAL AR GFG L -- S P GPPAAA 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 384 VDTA - P YF TRS LF PQALLA E PN LA TES R AWLM R S R RRLTVFS A TGGV AAL L L ITG W HHY Y NG N YQSGIT V LK Q AK A FMDV 462
Cdd:TIGR03348 394 RGEG r S YF LKD LF KEVIFP E AG LA GLN R RAER R R R WLRRGAY A AAAL AAL G L LGL W SLS Y LA N RDYLDE V RT Q LE A YRAL 473
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 463 PPPQG - EDDYGNLQ LP L L NPV RDA T L AY G DWGDRSR L - A DM GLYQG RRI G PY V EQ TYL QL L EQRY LP S L FNG L VKAMN A A 540
Cdd:TIGR03348 474 AQAIP a APADVLAL LP A L DAL RDA P L GF G NYDEAPP L l A RF GLYQG DKL G EA V RE TYL RA L QAVL LP R L MQR L EAQLQ A Q 553
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 541 PPES EE KLAV L R V MR ML E D K S G R NNEV VK QYM A K RW SEKFH G -- QR DIQAQ L MS HL DYA L ahtdwhaerq AG D G DA ISRW 618
Cdd:TIGR03348 554 EQDP EE LYET L K V YL ML G D P S R R DADF VK AWF A S RW EQQYP G ey QR ELREA L LG HL RAL L ---------- SL D Q DA VPAF 623
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 619 TPY D KP V VS A QK EL SKL P VY QRVYQ S LK TRA L GVLPA DL N L R D QV GP TF D Q VF TSADDNK L -- VV P QFL TR Y G LQSY F VK 696
Cdd:TIGR03348 624 PLD D AL V EQ A RA EL RAI P LA QRVYQ R LK LQP L DAALP DL S L A D AL GP QA D L VF ERRSGKP L sl GI P GLY TR A G YHDV F LP 703
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 697 Q RDE LVE LTAM D S WVL N - LTRSVKY S D ADR AEIQ R QLTEQ Y IS DY TAT W R A GMDN L NIRN FES IG Q LTGALEQVI S G D Q P 775
Cdd:TIGR03348 704 Q IAN LVE RALE D A WVL G g ASGNSQL S E ADR QALA R EVRKL Y FA DY INQ W D A LLND L RLKP FES LA Q AAALARALA S P D S P 783
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 776 L Q R A L TVLRDN T QPGVFSEKLS -------------- A KERDEA L AEPDY ----- QLLTRLGHE F A P ENIT LA VQKDKEST 836
Cdd:TIGR03348 784 L A R L L RAVARE T RLTPVDGAPA dggsnaaakklsgl A SALGAQ L LPAAP gaaal PEPGAVERH F E P LRRL LA PNGGPGAA 863
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 837 MQ A VYQQ L T EL HRY L L A IQNA P V PG KS ALKA VQ lrld QNSS D PIF A T RQ M A KT LP A PL NR W V G R L TDQA W HV V MVE A VHY 916
Cdd:TIGR03348 864 LD A LLAA L N EL YQQ L Q A LAAS P N PG QA ALKA RM ---- SGLA D ALS A L RQ A A AR LP E PL RG W L G S L AADT W KL V LQA A RSH 939
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 917 MEVD W RDS V VKPFNEQL A NN YPF N P R S AQ D AS L DA FERFF K P D G I LD T F Y QQNL KL F I D --- N DLSLED GD NNVI - I RED 992
Cdd:TIGR03348 940 LNAR W QSE V YSFCQQAI A GR YPF S P N S SK D VP L AD FERFF G P G G L LD S F F QQNL AP F V D tsa N PWRWKG GD GGSL g I SPS 1019
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 993 II AQ LET A QK IRD I FF - S KQNGLGT SF AVETV SL SG N K RR S VL NL DGQ LVD Y SQ G RNYTAH L V WP NNM r E G NESK LTL IG 1071
Cdd:TIGR03348 1020 VL AQ FQR A AR IRD A FF r S GGGEPAV SF TLKPI SL DP N I RR F VL EV DGQ TLR Y AH G PTRPVS L T WP GPN - D G GLAR LTL KP 1098
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1447699269 1072 TS G NA PR SIS FSGPWA Q FRL FG AG Q LT GVQDGN - FTV RF S V D GGA MT Y RVHTDTE DNPF SG GL F S Q F GLSD 1141
Cdd:TIGR03348 1099 AD G GS PR TLT FSGPWA L FRL LD AG R LT RTGSRD r LDL RF D V G GGA VR Y ELRAGSA DNPF TS GL L S G F RCPG 1169
IcmF-related
pfam06761 Intracellular multiplication and human macrophage-killing; This family represents a conserved ...
476-788
6.35e-72
Intracellular multiplication and human macrophage-killing; This family represents a conserved region within several bacterial proteins that resemble IcmF, which has been proposed to be involved in Vibrio cholerae cell surface reorganization, resulting in increased adherence to epithelial cells and increased conjugation frequency. Note that many family members are hypothetical proteins.
Pssm-ID: 429106 [Multi-domain]
Cd Length: 305
Bit Score: 241.86
E-value: 6.35e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 476 LP L L NPV RD ATLA -- YGDWGDRSRLADM GLYQG RRI G PYVEQT Y LQL L E Q RY LP S L FNG L VKAMN A - A P P ES E EKLAV L R 552
Cdd:pfam06761 1 LP A L DAL RD LPEG ll DYYQEGPPLSYRF GLYQG DKL G AAARAA Y RRA L R Q LL LP R L AQR L EAQLR A l A G P DP E ALYEA L K 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 553 VMR ML E D KSG R NNEVVKQYMAKR W SEKFH GQ RDI Q -- AQ L MS HLD YA LA H tdwh AERQAG D GDAISR wtpydkpvvs A QK 630
Cdd:pfam06761 81 AYL ML G D PER R DAAFLAAWLTRD W ERALP GQ ATG Q qr EA L LA HLD AL LA D ---- PPAIPP D AALVAQ ---------- A RA 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 631 E L SKL P VYQ RVYQ S LK TR AL GVLPA D LN L R D Q VGP TFDQ VFT SADDNK L -- V VP QFL TR Y G LQS YF VKQR DEL V EL TAMD 708
Cdd:pfam06761 147 T L ARV P LAE RVYQ R LK RQ AL ASALP D FT L A D A VGP DAAL VFT RSSGKP L se G VP GLF TR A G YHG YF LPAL DEL A EL LLEE 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 709 S WVL NLTRSVKY s D AD RAEIQRQ L T E Q Y IS DY T A T W R A GMDN L NIRN F E S IG Q LTGA L EQVISG D Q PL Q R A L TVLR D N T Q 788
Cdd:pfam06761 227 D WVL GDLAASAL - E AD PEQLADD L R E L Y FT DY A A A W Q A FLND L RLVP F A S LA Q AIDV L RLLADP D S PL L R L L QAVA D E T T 305
IcmF-related_N
pfam14331 IcmF-related N-terminal domain; This domain is found in bacterial IcmF (intracellular ...
174-427
1.05e-58
IcmF-related N-terminal domain; This domain is found in bacterial IcmF (intracellular multiplication and human macrophage-killing) proteins. It is found to the N-terminus of the IcmF-related domain, pfam06761.
Pssm-ID: 433873 [Multi-domain]
Cd Length: 258
Bit Score: 202.84
E-value: 1.05e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 174 HRRL W EHA L GW LK EK R A RQP L NG IIL T LD L P DLL T A DKRH RE HLLQT LR S RLQ DI R QH L HCQL PVYVVLT RL DLL Q GF AA 253
Cdd:pfam14331 3 DAAE W LGF L DL LK KH R P RQP I NG VLV T VS L A DLL S A SEEE RE AHARA LR A RLQ EL R ET L GVRF PVYVVLT KA DLL A GF DE 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 254 L F QS L N R QD R DAIL G V TF TRR A HEND D WR t ELNAFWQTWVD R M N LA L P D LMVTQ -- THT RA SL F S F S RQ MQGSREP L VSL 331
Cdd:pfam14331 83 F F AD L D R EE R EQVW G F TF PYD A DDEP D AV - LFDQEFDELLE R L N AR L L D RLQEE rd AER RA AI F A F P RQ FAALKPR L REF 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 332 LE G L LDGEN -- MNVM LRGVY L TS SL Q R G QMD D IFTQSA AR QYR L GNNP L ASWP l VDTAP YF TRS LF PQALLA E PN LA TES 409
Cdd:pfam14331 162 LE E L FAPNR yq EAPL LRGVY F TS AT Q E G TPI D RLAGAL AR RFG L EAAA L PATS - GAGRS YF LHD LF RDVIFP E AG LA GPN 240
250
....*....|....*...
gi 1447699269 410 R A W LM R S R RRLTVFS A TG 427
Cdd:pfam14331 241 R R W ER R R R LLRRAGY A AA 258
IcmF_C
pfam06744 Type VI secretion protein IcmF C2-like domain; IcmF_C family represents a conserved region ...
1018-1124
1.97e-26
Type VI secretion protein IcmF C2-like domain; IcmF_C family represents a conserved region situated towards the C-terminal end of IcmF-like proteins. It was thought to be involved in Vibrio cholerae cell surface reorganization that results in increased adherence to epithelial cells leading to an increased conjugation frequency. IcmF as a whole interacts with DotU whereby these bind tightly and form the docking area of the T6SS within the inner membrane. The exact function of this domain is not clear.
Pssm-ID: 429094 [Multi-domain]
Cd Length: 106
Bit Score: 104.72
E-value: 1.97e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699269 1018 F AVETVS L SGNKR R S VL NL DGQ LVD Y SQ G RNYTAHLV WP NN m R EGNESK LTL IGTS G NAPRSI S FS GPWA Q FRL FGAG Q L 1097
Cdd:pfam06744 1 F ELRPLP L DPGVT R F VL EI DGQ TLR Y RH G PSQWTPFS WP GP - R GSPGAR LTL TDDD G GTVSTL S YE GPWA L FRL LDKA Q V 79
90 100
....*....|....*....|....*..
gi 1447699269 1098 T GVQDGN F TVR F S VDG GAMT Y RVHT D T 1124
Cdd:pfam06744 80 T RTDSDR F RLT F D VDG RKAR Y ELRA D S 106
VirB11
COG0630 Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase ArlI/FlaI [Cell ...
68-124
9.63e-03
Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase ArlI/FlaI [Cell motility, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440395 [Multi-domain]
Cd Length: 462
Bit Score: 39.68
E-value: 9.63e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1447699269 68 RE EAID P -------- LS V EL N A qqr YL dr WLL rlqrh L D N RRFL wqlpwy M V I G PAG SGKTTLL R 124
Cdd:COG0630 260 RE VPLT P idliewgt LS P EL A A --- YL -- WLL ----- L E N GKSV ------ L V A G GTA SGKTTLL N 308
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
