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Conserved domains on  [gi|1447699278|ref|NP_308337|]
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hypothetical protein ECs_0310 [Escherichia coli O157:H7 str. Sakai]

Protein Classification

alpha/beta hydrolase( domain architecture ID 11437497)

alpha/beta hydrolase catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

CATH:  3.40.50.1820
EC:  3.-.-.-
Gene Ontology:  GO:0016787

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
22-351 4.68e-89

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


:

Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 267.94  E-value: 4.68e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  22 TFAESQKVDHRKVSFPNRYGITLVGDLYLPKDrGDRKLAAIAVSGPFGAVKEQSSgLYAQTLAERGFVTLAFDPSYTGES 101
Cdd:COG1073     1 IFPPSDKVNKEDVTFKSRDGIKLAGDLYLPAG-ASKKYPAVVVAHGNGGVKEQRA-LYAQRLAELGFNVLAFDYRGYGES 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 102 GGYPRNVASPDINteDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDmsramghgvgDGE 181
Cdd:COG1073    79 EGEPREEGSPERR--DARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVILDSPFT----------SLE 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 182 DrystadrravlqyLNEQRWKDAQSgtfahgghdinvdsngkvsagerilpETLPAnphpvlkefFDYyrMPRgfhersv 261
Cdd:COG1073   147 D-------------LAAQRAKEARG--------------------------AYLPG---------VPY--LPN------- 169
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 262 nstgawtaTMPLSFMN--MPLLSYASEITIPTLIVTGEK--AHSRYFAEDAYKAVgSKDKELVVVPGANHVDLYDnVAGK 337
Cdd:COG1073   170 --------VRLASLLNdeFDPLAKIEKISRPLLFIHGEKdeAVPFYMSEDLYEAA-AEPKELLIVPGAGHVDLYD-RPEE 239
                         330
                  ....*....|....
gi 1447699278 338 IPFAKFEQFFQTKL 351
Cdd:COG1073   240 EYFDKLAEFFKKNL 253
 
Name Accession Description Interval E-value
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
22-351 4.68e-89

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 267.94  E-value: 4.68e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  22 TFAESQKVDHRKVSFPNRYGITLVGDLYLPKDrGDRKLAAIAVSGPFGAVKEQSSgLYAQTLAERGFVTLAFDPSYTGES 101
Cdd:COG1073     1 IFPPSDKVNKEDVTFKSRDGIKLAGDLYLPAG-ASKKYPAVVVAHGNGGVKEQRA-LYAQRLAELGFNVLAFDYRGYGES 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 102 GGYPRNVASPDINteDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDmsramghgvgDGE 181
Cdd:COG1073    79 EGEPREEGSPERR--DARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVILDSPFT----------SLE 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 182 DrystadrravlqyLNEQRWKDAQSgtfahgghdinvdsngkvsagerilpETLPAnphpvlkefFDYyrMPRgfhersv 261
Cdd:COG1073   147 D-------------LAAQRAKEARG--------------------------AYLPG---------VPY--LPN------- 169
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 262 nstgawtaTMPLSFMN--MPLLSYASEITIPTLIVTGEK--AHSRYFAEDAYKAVgSKDKELVVVPGANHVDLYDnVAGK 337
Cdd:COG1073   170 --------VRLASLLNdeFDPLAKIEKISRPLLFIHGEKdeAVPFYMSEDLYEAA-AEPKELLIVPGAGHVDLYD-RPEE 239
                         330
                  ....*....|....
gi 1447699278 338 IPFAKFEQFFQTKL 351
Cdd:COG1073   240 EYFDKLAEFFKKNL 253
DLH pfam01738
Dienelactone hydrolase family;
80-162 1.43e-04

Dienelactone hydrolase family;


Pssm-ID: 396343 [Multi-domain]  Cd Length: 213  Bit Score: 42.34  E-value: 1.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  80 AQTLAERGFVTLAFDPSYTGESGGYPRNVA----------SPDINTEDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMAL 149
Cdd:pfam01738  32 ADRLADEGYVALAPDLYFRQGDPNDEADAAramfelvskrVMEKVLDDLEAAVNYLKSQPEVSPKKVGVVGYCMGGALAV 111
                          90
                  ....*....|...
gi 1447699278 150 NDAAMDTRVKAVA 162
Cdd:pfam01738 112 LLAAKGPLVDAAV 124
 
Name Accession Description Interval E-value
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
22-351 4.68e-89

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 267.94  E-value: 4.68e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  22 TFAESQKVDHRKVSFPNRYGITLVGDLYLPKDrGDRKLAAIAVSGPFGAVKEQSSgLYAQTLAERGFVTLAFDPSYTGES 101
Cdd:COG1073     1 IFPPSDKVNKEDVTFKSRDGIKLAGDLYLPAG-ASKKYPAVVVAHGNGGVKEQRA-LYAQRLAELGFNVLAFDYRGYGES 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 102 GGYPRNVASPDINteDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDmsramghgvgDGE 181
Cdd:COG1073    79 EGEPREEGSPERR--DARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVILDSPFT----------SLE 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 182 DrystadrravlqyLNEQRWKDAQSgtfahgghdinvdsngkvsagerilpETLPAnphpvlkefFDYyrMPRgfhersv 261
Cdd:COG1073   147 D-------------LAAQRAKEARG--------------------------AYLPG---------VPY--LPN------- 169
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 262 nstgawtaTMPLSFMN--MPLLSYASEITIPTLIVTGEK--AHSRYFAEDAYKAVgSKDKELVVVPGANHVDLYDnVAGK 337
Cdd:COG1073   170 --------VRLASLLNdeFDPLAKIEKISRPLLFIHGEKdeAVPFYMSEDLYEAA-AEPKELLIVPGAGHVDLYD-RPEE 239
                         330
                  ....*....|....
gi 1447699278 338 IPFAKFEQFFQTKL 351
Cdd:COG1073   240 EYFDKLAEFFKKNL 253
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
35-352 4.42e-20

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 87.76  E-value: 4.42e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  35 SFPNRYGITLVGDLYLPKDrgDRKLAAIAVSGPFGAVKEQSSGLYAQTLAERGFVTLAFDPSYTGESGGyprnvASPDIN 114
Cdd:COG1506     1 TFKSADGTTLPGWLYLPAD--GKKYPVVVYVHGGPGSRDDSFLPLAQALASRGYAVLAPDYRGYGESAG-----DWGGDE 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 115 TEDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAMDT-RVKAVATSVmydmsramghGVGDGEDRYSTADRRAVL 193
Cdd:COG1506    74 VDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPdRFKAAVALA----------GVSDLRSYYGTTREYTER 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 194 qylneqrwkdaqsgtfahgghdinvdsngkvsagerilpetlpanphpvlkEFFDYYRMPRGFHERSvnstgawtatmpl 273
Cdd:COG1506   144 ---------------------------------------------------LMGGPWEDPEAYAARS------------- 159
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 274 sfmnmpLLSYASEITIPTLIVTGEK------AHSRYFAEDAYKAvgSKDKELVVVPGANHVdLYDNVAGKIpFAKFEQFF 347
Cdd:COG1506   160 ------PLAYADKLKTPLLLIHGEAddrvppEQAERLYEALKKA--GKPVELLVYPGEGHG-FSGAGAPDY-LERILDFL 229

                  ....*
gi 1447699278 348 QTKLK 352
Cdd:COG1506   230 DRHLK 234
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
29-189 4.53e-14

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 70.77  E-value: 4.53e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  29 VDHRKVSFPNRYGITLVGDLYLPKDRGdrKLAAIAV----SGPFGAVKEqssglYAQTLAERGFVTLAFDPSYTGESGGY 104
Cdd:COG0412     1 MTTETVTIPTPDGVTLPGYLARPAGGG--PRPGVVVlheiFGLNPHIRD-----VARRLAAAGYVVLAPDLYGRGGPGDD 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 105 P------RNVASPDINTEDFSAAVDFLGLQKEVDRNRIGLLGICgWGG-MALNDAAMDTRVKAVatsVMYdmsramgHGV 177
Cdd:COG0412    74 PdearalMGALDPELLAADLRAALDWLKAQPEVDAGRVGVVGFC-FGGgLALLAAARGPDLAAA---VSF-------YGG 142
                         170
                  ....*....|..
gi 1447699278 178 GDGEDRYSTADR 189
Cdd:COG0412   143 LPADDLLDLAAR 154
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
31-164 7.12e-06

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 46.53  E-value: 7.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  31 HRKVSFPNRYGITLVGDLYLPKDRGDRklAAIAVSGpFGAvkeqSSGLY---AQTLAERGFVTLAFDPSYTGESGGYPRN 107
Cdd:COG2267     3 RRLVTLPTRDGLRLRGRRWRPAGSPRG--TVVLVHG-LGE----HSGRYaelAEALAAAGYAVLAFDLRGHGRSDGPRGH 75
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1447699278 108 VASPDINTEDFSAAVDFLglqKEVDRNRIGLLGICgWGGM-ALNDAAM-DTRVKAVATS 164
Cdd:COG2267    76 VDSFDDYVDDLRAALDAL---RARPGLPVVLLGHS-MGGLiALLYAARyPDRVAGLVLL 130
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
285-352 9.41e-06

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 46.47  E-value: 9.41e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1447699278 285 SEITIPTLIVTGEK------AHSRYFaedaYKAVGSKDKELVVVPGANHVDLYDNVAGKIpFAKFEQFFQTKLK 352
Cdd:COG1647   178 PKITAPTLIIQSRKdevvppESARYI----YERLGSPDKELVWLEDSGHVITLDKDREEV-AEEILDFLERLAA 246
DLH pfam01738
Dienelactone hydrolase family;
80-162 1.43e-04

Dienelactone hydrolase family;


Pssm-ID: 396343 [Multi-domain]  Cd Length: 213  Bit Score: 42.34  E-value: 1.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  80 AQTLAERGFVTLAFDPSYTGESGGYPRNVA----------SPDINTEDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMAL 149
Cdd:pfam01738  32 ADRLADEGYVALAPDLYFRQGDPNDEADAAramfelvskrVMEKVLDDLEAAVNYLKSQPEVSPKKVGVVGYCMGGALAV 111
                          90
                  ....*....|...
gi 1447699278 150 NDAAMDTRVKAVA 162
Cdd:pfam01738 112 LLAAKGPLVDAAV 124
Axe1 COG3458
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, ...
19-180 1.94e-04

Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442681 [Multi-domain]  Cd Length: 318  Bit Score: 42.87  E-value: 1.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  19 WDKTFAESQKVDHRKVSFPNRYGITLVG--DLYLPKDRGDR---KLAAIAVSGPFGAVKE-----QSSGLYAQTL--AER 86
Cdd:COG3458    28 WDATLAEARAVPLDPELTPVETGLPGVEvyDVTFTGFGGARiygWLLRPKGEGPLPAVVEfhgygGGRGLPHEDLdwAAA 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  87 GFVTLAFD-------PSYTGESGGYP---------RNVASPD------INTeDFSAAVDFLGLQKEVDRNRIGLLGICGW 144
Cdd:COG3458   108 GYAVLVMDtrgqgssWGDTPDPGGYSggalpgymtRGIDDPDtyyyrrVYL-DAVRAVDALRSLPEVDGKRIGVTGGSQG 186
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1447699278 145 GGMALNDAAMDTRVKAVATSV--MYDMSRAMGHGVGDG 180
Cdd:COG3458   187 GGLALAAAALDPRVKAAAADVpfLCDFRRALELGRAGP 224
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
80-333 8.19e-04

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 40.57  E-value: 8.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  80 AQTLAERGFVTLAFDPSYTGESGGYPrnvASPDINTEDFSAAVDF----LGLQKevdrnrIGLLGICgWGGM-ALNDAAM 154
Cdd:pfam00561  20 APALARDGFRVIALDLRGFGKSSRPK---AQDDYRTDDLAEDLEYileaLGLEK------VNLVGHS-MGGLiALAYAAK 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 155 -DTRVKAVATsvmyDMSRAMGHGVGDgedrystADRRAVLQYLNEQRwKDAQSGTFAHGGHDINVDSNgkvsagerilPE 233
Cdd:pfam00561  90 yPDRVKALVL----LGALDPPHELDE-------ADRFILALFPGFFD-GFVADFAPNPLGRLVAKLLA----------LL 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 234 TLPANPHPVLKEFF-DYYRMPRgfheRSVNSTGAWTATMPLSFMNMPLLSYASEITIPTLIVTGEkaHSRYFAEDAYKAV 312
Cdd:pfam00561 148 LLRLRLLKALPLLNkRFPSGDY----ALAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIWGD--QDPLVPPQALEKL 221
                         250       260
                  ....*....|....*....|...
gi 1447699278 313 GSK--DKELVVVPGANHVDLYDN 333
Cdd:pfam00561 222 AQLfpNARLVVIPDAGHFAFLEG 244
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
284-327 2.37e-03

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 39.12  E-value: 2.37e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1447699278 284 ASEITIPTLIVTGEKAH--SRYFAEDAYKAVGSKDKELVVVPGANH 327
Cdd:pfam12146 186 AAAITVPLLLLHGGADRvvDPAGSREFYERAGSTDKTLKLYPGLYH 231
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
80-218 2.90e-03

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 38.36  E-value: 2.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  80 AQTLAERGFVTLAfdPSYTGeSGGYPR---NVASPDINT---EDFSAAVDFLGLQKEVDRNRIGLLGICGWG---GMALN 150
Cdd:pfam00326   7 AQLLADRGYVVAI--ANGRG-SGGYGEafhDAGKGDLGQnefDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGyltGAALN 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278 151 DAamDTRVKAVA-----TSVMYDMS--------RAMGHGVG-DGEDRYstaDRRAVLQYLNEQRWKDAqsgTFA-HGGHD 215
Cdd:pfam00326  84 QR--PDLFKAAVahvpvVDWLAYMSdtslpfteRYMEWGNPwDNEEGY---DYLSPYSPADNVKVYPP---LLLiHGLLD 155

                  ...
gi 1447699278 216 INV 218
Cdd:pfam00326 156 DRV 158
FrsA-like pfam06500
Esterase FrsA-like; The FrsA-like family includes FrsA, an esterase found to have the alpha ...
32-162 5.70e-03

Esterase FrsA-like; The FrsA-like family includes FrsA, an esterase found to have the alpha/beta-hydrolase fold. t also includes the hydrolytic polyketide shortening protein Ayg1 from fungi, 2,6-dihydropseudooxynicotine hydrolase from Paenarthrobacter nicotinovorans and Fus2 from Gibberella species. The enzyme 2,6-dihydroxy-pseudo-oxynicotine hydrolase is involved in the nicotine-degradation pathway of Arthrobacter nicotinovorans. Fus2 is part of the gene cluster that mediates the biosynthesis of the mycotoxin fusarin C. Fus2 catalyzes closure of the 2-pyrrolidone ring of the intermediate 20-hydroxy-prefusarin to form another intermediate, 20-hydroxy-fusarin, which is then oxidized by Fus8.


Pssm-ID: 428978 [Multi-domain]  Cd Length: 414  Bit Score: 38.32  E-value: 5.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447699278  32 RKVSFPNRYGITLVGDLYLPkdRGDRKLAAIAVSGPFGAVKEQSSGLYAQTLAERGFVTLAFDPSYTGESGGYPRnvasp 111
Cdd:pfam06500 169 KQLEFPYQGGAKITGFLHMP--KGDGPFPTVLMCGGLDSLQTDYWRLFRDYFAPKGIAMLTIDMPSVGASSHWKL----- 241
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1447699278 112 dinTEDFS----AAVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAMDT-RVKAVA 162
Cdd:pfam06500 242 ---TQDSSclhqAVLNALADVPWVDHTRVGLFGFRFGANVAVRLAYLESpRVKAVA 294
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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