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Conserved domains on  [gi|15829759|ref|NP_308532|]
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ammonium transporter [Escherichia coli O157:H7 str. Sakai]

Protein Classification

ammonium transporter( domain architecture ID 10013599)

ammonium transporter similar to Escherichia coli AmtB, an integral membrane protein that functions as an ammonium channel that links to the sensor protein GlnK to regulate ammonium uptake

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10666 PRK10666
ammonium transporter AmtB;
1-428 0e+00

ammonium transporter AmtB;


:

Pssm-ID: 182630  Cd Length: 428  Bit Score: 752.73  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759    1 MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCIL 80
Cdd:PRK10666   1 MKIATIKTGLASLALLPGLAMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCIL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   81 WVVYGYSLAFGEGNNFFGNINWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL 160
Cdd:PRK10666  81 WVVYGYSLAFGEGNAFFGNFNWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  161 SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG 240
Cdd:PRK10666 161 SYIPIAHMVWGGGLLASDGALDFAGGTVVHINAAVAGLVGAYLLGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  241 SAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWG 320
Cdd:PRK10666 241 SAGAANEIAALAFVNTVVATAAAILGWVFGEWALRGKPSLLGACSGAIAGLVGVTPACGYVGVGGALIIGVVAGLAGLWG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  321 VTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLAD 400
Cdd:PRK10666 321 VTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFAASSLGGVGYAEGVTMGHQVLVQLESIAITIVWSGVVAFIGYKLAD 400
                        410       420
                 ....*....|....*....|....*...
gi 15829759  401 LTVGLRVPEEQEREGLDVNSHGENAYNA 428
Cdd:PRK10666 401 LTVGLRVPEEQEREGLDVNSHGENAYNA 428
 
Name Accession Description Interval E-value
PRK10666 PRK10666
ammonium transporter AmtB;
1-428 0e+00

ammonium transporter AmtB;


Pssm-ID: 182630  Cd Length: 428  Bit Score: 752.73  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759    1 MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCIL 80
Cdd:PRK10666   1 MKIATIKTGLASLALLPGLAMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCIL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   81 WVVYGYSLAFGEGNNFFGNINWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL 160
Cdd:PRK10666  81 WVVYGYSLAFGEGNAFFGNFNWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  161 SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG 240
Cdd:PRK10666 161 SYIPIAHMVWGGGLLASDGALDFAGGTVVHINAAVAGLVGAYLLGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  241 SAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWG 320
Cdd:PRK10666 241 SAGAANEIAALAFVNTVVATAAAILGWVFGEWALRGKPSLLGACSGAIAGLVGVTPACGYVGVGGALIIGVVAGLAGLWG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  321 VTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLAD 400
Cdd:PRK10666 321 VTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFAASSLGGVGYAEGVTMGHQVLVQLESIAITIVWSGVVAFIGYKLAD 400
                        410       420
                 ....*....|....*....|....*...
gi 15829759  401 LTVGLRVPEEQEREGLDVNSHGENAYNA 428
Cdd:PRK10666 401 LTVGLRVPEEQEREGLDVNSHGENAYNA 428
AmtB COG0004
Ammonia channel protein AmtB [Inorganic ion transport and metabolism];
21-427 1.62e-178

Ammonia channel protein AmtB [Inorganic ion transport and metabolism];


Pssm-ID: 439775  Cd Length: 413  Bit Score: 504.26  E-value: 1.62e-178
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  21 MAAPAVADKADNAFMMICTALVLFMTiPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNN-FFGN 99
Cdd:COG0004   1 MAAAALLDSGDTAWMLVAAALVLLMT-PGFALFEGGLVRSKNVLNVLMKNFADFALVSVLWVLVGYSLAFGPGAGgFIGG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 100 INWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWGGGLLASHG 179
Cdd:COG0004  80 PLGFFLSGVGPGSLAGTIPELVFFLFQMMFAAITAAIISGAVAERMKFSAYLIFSVLWSTLVYPPVAHWVWGGGWLAQLG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 180 ALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGK---EAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNT 256
Cdd:COG0004 160 FLDFAGGTVVHIVGGWAALAGALVLGPRIGKYKgkpNAIPPHNLPLAALGAFLLWFGWFGFNAGSALAANGLAGLAFVNT 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 257 VVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDV 336
Cdd:COG0004 240 NLAAAAGALAWLLVEWLRKGKPDLLGAANGALAGLVAITPAAGFVSPLGALVIGLIAGVICVFAVTFLKRKLKIDDPLGA 319
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 337 FGVHGVCGIVGCIMTGIFAASSLGGVGFAEGvTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGL 416
Cdd:COG0004 320 FGVHGVGGIWGTLATGLFASPALGGAGLFYG-GGAAQLGVQLIGVLVVGVWAFVVSFIILKILKKTIGLRVSEEEEREGL 398
                       410
                ....*....|.
gi 15829759 417 DVNSHGENAYN 427
Cdd:COG0004 399 DLSEHGERAYP 409
amt TIGR00836
ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally ...
32-426 3.48e-157

ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally characterized members of the Amt family are ammonia or ammonium uptake transporters. Some, but not others, also transport methylammonium. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273292  Cd Length: 403  Bit Score: 449.80  E-value: 3.48e-157
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759    32 NAFMMICTALVLFMTiPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEG---NNFFGNINWLMLKNI 108
Cdd:TIGR00836   1 TAWLLIAAALVFFMQ-PGFALLYAGLVRSKNVLNIMMKNLLDFAIGSLLWWLFGYSLAFGEDnpiNGFIGTGGFGLKNFL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   109 ELTAVM--GSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWG-GGLLASHGALDFAG 185
Cdd:TIGR00836  80 YPGKISlaGTLPDLLFFLFQMMFAAIAATIISGAVAERMKFSAYLLFSVLWTTLVYPPVAHWVWGgGGWLYKLGVLDFAG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   186 GTVVHINAAIAGLVGAYLIGKRVGFGKE--AFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAA 263
Cdd:TIGR00836 160 GGVVHIVGGVAGLAAALVLGPRIGRFPRpvAIRPHNVPLVVLGTFILWFGWFGFNAGSALAANGTAAYAAVNTNLAAAAG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   264 ILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVC 343
Cdd:TIGR00836 240 GLTWLLIDWLKHGKPTLLGACNGILAGLVAITPGCGVVTPWGAIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   344 GIVGCIMTGIFAASSLGGVGFAEGVT-MGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNSHG 422
Cdd:TIGR00836 320 GIWGLIATGLFAAPKVGGVGTGGLLGgNGKQLGVQLIGIAAIIAWAFVVTFIILKILDKTIGLRVSEEEEKIGLDLAEHG 399

                  ....
gi 15829759   423 ENAY 426
Cdd:TIGR00836 400 EFAY 403
Ammonium_transp pfam00909
Ammonium Transporter Family;
33-426 2.03e-131

Ammonium Transporter Family;


Pssm-ID: 395729  Cd Length: 399  Bit Score: 383.95  E-value: 2.03e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759    33 AFMMICTALVLFMTiPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGE---GNNFFGNINWLMLknie 109
Cdd:pfam00909   1 AFILLSAALVIFMQ-PGFALLESGLVRSKNVLNILYKNFQDVAIGVLAYWLFGYSLAFGKrygFSGFIGNLGVSAA---- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   110 lTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWG-GGLLASHGAL-DFAGGT 187
Cdd:pfam00909  76 -GIQWGTLPDGLFFLFQMMFAATAITIVSGAVAERIKFSAYLLFSALLGTLVYPPVAHWVWGeGGWLAKLGVLvDFAGST 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   188 VVHINAAIAGLVGAYLIGKRVGFG---KEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIA-ALAFVNTVVATAAA 263
Cdd:pfam00909 155 VVHIFGGYAGLAAALVLGPRIGRFtgkNEAITPHNLPFAVLGTFLLWFGWFGFNAGSALTANGRArAIAAVNTNLAAAGG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   264 ILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVC 343
Cdd:pfam00909 235 GLTALLISRLKTGKPNMLGLANGALAGLVAITPACGVVTPWGALIIGLIAGVLSVLGYKFLKEKLGIDDPLDVFPVHGVG 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   344 GIVGCIMTGIFAASSLGGVGFAEGVTMGH--QLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNSH 421
Cdd:pfam00909 315 GIWGGIAVGIFAAPYVNTSGIYGGLLYGNgkQLGVQLIGIAVILAYAFGVTFILGLLLGLTLGLRVSEEEEEVGLDVAEH 394

                  ....*
gi 15829759   422 GENAY 426
Cdd:pfam00909 395 GETAY 399
 
Name Accession Description Interval E-value
PRK10666 PRK10666
ammonium transporter AmtB;
1-428 0e+00

ammonium transporter AmtB;


Pssm-ID: 182630  Cd Length: 428  Bit Score: 752.73  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759    1 MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCIL 80
Cdd:PRK10666   1 MKIATIKTGLASLALLPGLAMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCIL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   81 WVVYGYSLAFGEGNNFFGNINWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL 160
Cdd:PRK10666  81 WVVYGYSLAFGEGNAFFGNFNWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  161 SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG 240
Cdd:PRK10666 161 SYIPIAHMVWGGGLLASDGALDFAGGTVVHINAAVAGLVGAYLLGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  241 SAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWG 320
Cdd:PRK10666 241 SAGAANEIAALAFVNTVVATAAAILGWVFGEWALRGKPSLLGACSGAIAGLVGVTPACGYVGVGGALIIGVVAGLAGLWG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  321 VTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLAD 400
Cdd:PRK10666 321 VTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFAASSLGGVGYAEGVTMGHQVLVQLESIAITIVWSGVVAFIGYKLAD 400
                        410       420
                 ....*....|....*....|....*...
gi 15829759  401 LTVGLRVPEEQEREGLDVNSHGENAYNA 428
Cdd:PRK10666 401 LTVGLRVPEEQEREGLDVNSHGENAYNA 428
AmtB COG0004
Ammonia channel protein AmtB [Inorganic ion transport and metabolism];
21-427 1.62e-178

Ammonia channel protein AmtB [Inorganic ion transport and metabolism];


Pssm-ID: 439775  Cd Length: 413  Bit Score: 504.26  E-value: 1.62e-178
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759  21 MAAPAVADKADNAFMMICTALVLFMTiPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNN-FFGN 99
Cdd:COG0004   1 MAAAALLDSGDTAWMLVAAALVLLMT-PGFALFEGGLVRSKNVLNVLMKNFADFALVSVLWVLVGYSLAFGPGAGgFIGG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 100 INWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWGGGLLASHG 179
Cdd:COG0004  80 PLGFFLSGVGPGSLAGTIPELVFFLFQMMFAAITAAIISGAVAERMKFSAYLIFSVLWSTLVYPPVAHWVWGGGWLAQLG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 180 ALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGK---EAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNT 256
Cdd:COG0004 160 FLDFAGGTVVHIVGGWAALAGALVLGPRIGKYKgkpNAIPPHNLPLAALGAFLLWFGWFGFNAGSALAANGLAGLAFVNT 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 257 VVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDV 336
Cdd:COG0004 240 NLAAAAGALAWLLVEWLRKGKPDLLGAANGALAGLVAITPAAGFVSPLGALVIGLIAGVICVFAVTFLKRKLKIDDPLGA 319
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759 337 FGVHGVCGIVGCIMTGIFAASSLGGVGFAEGvTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGL 416
Cdd:COG0004 320 FGVHGVGGIWGTLATGLFASPALGGAGLFYG-GGAAQLGVQLIGVLVVGVWAFVVSFIILKILKKTIGLRVSEEEEREGL 398
                       410
                ....*....|.
gi 15829759 417 DVNSHGENAYN 427
Cdd:COG0004 399 DLSEHGERAYP 409
amt TIGR00836
ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally ...
32-426 3.48e-157

ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally characterized members of the Amt family are ammonia or ammonium uptake transporters. Some, but not others, also transport methylammonium. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273292  Cd Length: 403  Bit Score: 449.80  E-value: 3.48e-157
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759    32 NAFMMICTALVLFMTiPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEG---NNFFGNINWLMLKNI 108
Cdd:TIGR00836   1 TAWLLIAAALVFFMQ-PGFALLYAGLVRSKNVLNIMMKNLLDFAIGSLLWWLFGYSLAFGEDnpiNGFIGTGGFGLKNFL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   109 ELTAVM--GSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWG-GGLLASHGALDFAG 185
Cdd:TIGR00836  80 YPGKISlaGTLPDLLFFLFQMMFAAIAATIISGAVAERMKFSAYLLFSVLWTTLVYPPVAHWVWGgGGWLYKLGVLDFAG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   186 GTVVHINAAIAGLVGAYLIGKRVGFGKE--AFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAA 263
Cdd:TIGR00836 160 GGVVHIVGGVAGLAAALVLGPRIGRFPRpvAIRPHNVPLVVLGTFILWFGWFGFNAGSALAANGTAAYAAVNTNLAAAAG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   264 ILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVC 343
Cdd:TIGR00836 240 GLTWLLIDWLKHGKPTLLGACNGILAGLVAITPGCGVVTPWGAIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   344 GIVGCIMTGIFAASSLGGVGFAEGVT-MGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNSHG 422
Cdd:TIGR00836 320 GIWGLIATGLFAAPKVGGVGTGGLLGgNGKQLGVQLIGIAAIIAWAFVVTFIILKILDKTIGLRVSEEEEKIGLDLAEHG 399

                  ....
gi 15829759   423 ENAY 426
Cdd:TIGR00836 400 EFAY 403
Ammonium_transp pfam00909
Ammonium Transporter Family;
33-426 2.03e-131

Ammonium Transporter Family;


Pssm-ID: 395729  Cd Length: 399  Bit Score: 383.95  E-value: 2.03e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759    33 AFMMICTALVLFMTiPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGE---GNNFFGNINWLMLknie 109
Cdd:pfam00909   1 AFILLSAALVIFMQ-PGFALLESGLVRSKNVLNILYKNFQDVAIGVLAYWLFGYSLAFGKrygFSGFIGNLGVSAA---- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   110 lTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWG-GGLLASHGAL-DFAGGT 187
Cdd:pfam00909  76 -GIQWGTLPDGLFFLFQMMFAATAITIVSGAVAERIKFSAYLLFSALLGTLVYPPVAHWVWGeGGWLAKLGVLvDFAGST 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   188 VVHINAAIAGLVGAYLIGKRVGFG---KEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIA-ALAFVNTVVATAAA 263
Cdd:pfam00909 155 VVHIFGGYAGLAAALVLGPRIGRFtgkNEAITPHNLPFAVLGTFLLWFGWFGFNAGSALTANGRArAIAAVNTNLAAAGG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   264 ILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVC 343
Cdd:pfam00909 235 GLTALLISRLKTGKPNMLGLANGALAGLVAITPACGVVTPWGALIIGLIAGVLSVLGYKFLKEKLGIDDPLDVFPVHGVG 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829759   344 GIVGCIMTGIFAASSLGGVGFAEGVTMGH--QLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNSH 421
Cdd:pfam00909 315 GIWGGIAVGIFAAPYVNTSGIYGGLLYGNgkQLGVQLIGIAVILAYAFGVTFILGLLLGLTLGLRVSEEEEEVGLDVAEH 394

                  ....*
gi 15829759   422 GENAY 426
Cdd:pfam00909 395 GETAY 399
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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