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Conserved domains on  [gi|38703877|ref|NP_308619|]
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type-1 fimbrial protein subunit A [Escherichia coli O157:H7 str. Sakai]

Protein Classification

fimbrial protein( domain architecture ID 10015000)

fimbrial protein similar to Escherichia coli fimbrial-like protein SfmA and Salmonella enterica fimbrial subunit type 1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-180 1.58e-89

type 1 fimbrial protein subunit FimA;


:

Pssm-ID: 237920  Cd Length: 185  Bit Score: 259.50  E-value: 1.58e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877    1 MKLRFISSALAAALFAATGSYAAV-----VDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFT 75
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADptpvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   76 IQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSA 155
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQADATNDNLLAVASSTNTTTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFSA 160

                        170       180
                 ....*....|....*....|....*
gi 38703877  156 RYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15194 161 RYKATGTSASAGQANADATFIMKYE 185
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-180 1.58e-89

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 259.50  E-value: 1.58e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877    1 MKLRFISSALAAALFAATGSYAAV-----VDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFT 75
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADptpvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   76 IQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSA 155
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQADATNDNLLAVASSTNTTTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFSA 160

                        170       180
                 ....*....|....*....|....*
gi 38703877  156 RYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15194 161 RYKATGTSASAGQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
19-180 7.13e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 127.85  E-value: 7.13e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877  19 GSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQAD 98
Cdd:COG3539  15 SAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTAD 94

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877  99 AINDNLLAIassTNTTTATGVGIEILDNTSAILKPdgNSFSTNQNLIP-GTNVLHFSARYKGTGTSASAGQANADATFIM 177
Cdd:COG3539  95 SANPGLLAN---TGSGGASGVGIQLLDSDGTPIPL--GTPSSAVTLTSnGSATLPFYARYVATGATVTAGSFNATATFTI 169


                ...
gi 38703877 178 RYE 180
Cdd:COG3539 170 DYQ 172
Fimbrial pfam00419
Fimbrial protein;
30-180 1.24e-17

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 75.16  E-value: 1.24e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877    30 IHFEGEL--VNAACSVNTDSADQVvTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAi 107
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPIEV-DFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLL- 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38703877   108 aSSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLH-FSARYKGT-GTSASAGQANADATFIMRYE 180
Cdd:pfam00419  79 -TGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGItFTASLVATtGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-180 1.58e-89

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 259.50  E-value: 1.58e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877    1 MKLRFISSALAAALFAATGSYAAV-----VDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFT 75
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADptpvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   76 IQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSA 155
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQADATNDNLLAVASSTNTTTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFSA 160

                        170       180
                 ....*....|....*....|....*
gi 38703877  156 RYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15194 161 RYKATGTSASAGQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
19-180 7.13e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 127.85  E-value: 7.13e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877  19 GSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQAD 98
Cdd:COG3539  15 SAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTAD 94

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877  99 AINDNLLAIassTNTTTATGVGIEILDNTSAILKPdgNSFSTNQNLIP-GTNVLHFSARYKGTGTSASAGQANADATFIM 177
Cdd:COG3539  95 SANPGLLAN---TGSGGASGVGIQLLDSDGTPIPL--GTPSSAVTLTSnGSATLPFYARYVATGATVTAGSFNATATFTI 169


                ...
gi 38703877 178 RYE 180
Cdd:COG3539 170 DYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 18-180 3.56e-28

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 103.13  E-value: 3.56e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   18 TGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQA 97
Cdd:PRK15209  16 TSVFAAESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTNKKVNVSFNGVG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   98 DAINDNLLAIasSTNTTTATGVGIEILDNTSAILKPDGNSFSTnqNLIPGTNVLHFSARYKGTGTSASAGQANADATFIM 177
Cdd:PRK15209  96 DADDSTLVSV--STEAGAATGVGIGIYDNANTLVELNTGKSTT--TLAAGQTVLYFTANYVSTKDTVTTGYGNAEVDFNL 171


                 ...
gi 38703877  178 RYE 180
Cdd:PRK15209 172 SYE 174
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
24-179 1.50e-19

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 81.06  E-value: 1.50e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   24 VVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSAL-IPFTIQLNDCDPVVAANAAVAFSGQADAIND 102
Cdd:PRK15200  23 MVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVsVPFSLRLISCSAEVWRHVGIAFAGVTPAEDP 102

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 38703877  103 NLLaiASSTNTTTATGVGIEILDNTSAILKPdgNSFSTNQNLIPGTNV-LHFSARYKGTGTSASAGQANADATFIMRY 179
Cdd:PRK15200 103 HVF--LASGEGIGNAGIGLALFDDQQRQIIP--NTLPLHYAPILTSEMtLHFTARYRAISENMTPGRIHSEVWFTLVY 176
lpfA PRK15289
fimbrial protein; Provisional
 1-180 7.56e-19

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 79.62  E-value: 7.56e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877    1 MKLRFISSALAAALFAATGSyaAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLND 80
Cdd:PRK15289   1 MKRNIIGGAFTLASLMLAGH--ALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLEN 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   81 CdPVVAANAAVAFSGQADAINDNLLAIAS------------STNTTTATGVGIEIL---DNTSAILKPDGNSFSTNQNli 145
Cdd:PRK15289  79 C-PATYTQAAVRFDGTEAPGGDGDLKVGTpltagnpgdftgTGQAIAATGVGIRIFnqsDNSQVKLYNDSAYTAIDAE-- 155

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 38703877  146 pGTNVLHFSARYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15289 156 -GKAEMKFIARYVATNATVTAGTANADSQFTVEYK 189
Fimbrial pfam00419
Fimbrial protein;
30-180 1.24e-17

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 75.16  E-value: 1.24e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877    30 IHFEGEL--VNAACSVNTDSADQVvTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAi 107
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPIEV-DFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLL- 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38703877   108 aSSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLH-FSARYKGT-GTSASAGQANADATFIMRYE 180
Cdd:pfam00419  79 -TGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGItFTASLVATtGGTPTAGDFNATATIVVDYQ 152
PRK09934 PRK09934
fimbriae assembly protein;
28-179 2.89e-15

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 69.53  E-value: 2.89e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   28 GTIHFE--GELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPvvaANAAVAFSGqADAINDNLL 105
Cdd:PRK09934  25 GEINIElhGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP---GSASITFTG-TPASDTNLL 100

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 38703877  106 AIASSTNTTTatgVGIEILDNTSAILkPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRY 179
Cdd:PRK09934 101 ALDDPAMAQT---VAIEIRDSDRSRL-ALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAKADATFMINY 170
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 18-179 8.52e-15

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 68.58  E-value: 8.52e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   18 TGSYAAVVD---GGTIHFEGELVNAACSVNTDSADqvVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFS 94
Cdd:PRK15300  16 TLSPAALADtakDGTVHITGLIKQNACTVKTDSVE--VTLQEEFASLFTAAGQTAGDTDFTIELENCDANVYSSVQARFE 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   95 GQADAINDNLLAiasstNTTTATGVGIEILDNTSAILK-PDGNSFSTNQNLIPGTNV----LHFSARYKGTGTSASAGQA 169
Cdd:PRK15300  94 GTLDGTDATILK-----NEDDAENIGVQILDKTSTPMTfNDLQAWSAAVALPTAEGVtelsMPFTARYIATAVPVKSGTV 168

                        170
                 ....*....|
gi 38703877  170 NADATFIMRY 179
Cdd:PRK15300 169 DATATFYLQY 178
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 25-179 2.21e-14

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 67.54  E-value: 2.21e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   25 VDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIP-FTIQLNDCDPVVAANAAVAFSGQADAINDN 103
Cdd:PRK15187  29 VTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQKEdFTIKLEDCDTQTSQNAAVIFNGQQDANQPG 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877  104 LLAIASSTNTTTATGVgieildntsAILKPDGNSF-----STNQNLIPGTNVLHFSARYKGTGTsASAGQANADATFIMR 178
Cdd:PRK15187 109 SLANTAGAGSATNVAL---------QLYGPDGQALnigesSSTVTLNDGENVIPLSVDYIATGT-ATAGNVTATATFSMV 178


                 .
gi 38703877  179 Y 179
Cdd:PRK15187 179 Y 179
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 30-180 1.61e-13

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 65.10  E-value: 1.61e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   30 IHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDpVVAANAAVAFSGQADAINDNLLAIAS 109
Cdd:PRK15190  30 LEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCS-RGIAGAKIWFTGEPDPDNPALLAITD 108

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 38703877  110 S---TNTTTATGVGIEILDNTSAILKPDgNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15190 109 TgmgSGNMLASGVGVEILNDDQDTISIN-NADSVVYPLKAGRNTLSFYIRYKSTRPTVTSGNATAVMYFDMQYE 181
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 28-180 4.83e-12

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 61.27  E-value: 4.83e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   28 GTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDpVVAANAAVAFSGQADAINDNLLAI 107
Cdd:PRK15191  23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCG-STASGVTVSFSGAADSRNTDLLAL 101

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38703877  108 ASSTNTTTatGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15191 102 TAGESDAS--GIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGAVTPGDANASATFILAYE 172
PRK09733 PRK09733
fimbrial-like protein;
28-180 1.63e-10

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 57.27  E-value: 1.63e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   28 GTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAvGNTSALIPFTIQLNDCDPVVAANAAVAF-----SGQADAIND 102
Cdd:PRK09733  26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKS-DQKSLAEPFTIHLQDCMLSQGGTTYSKAkvtftTANTMTGQS 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 38703877  103 NLLAIASSTNTTTATGVGIEILDNTSAILKPdGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK09733 105 DLLKNTKETEIGGATGVGVRILDSQSGEVTL-GTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKIAYE 181
PRK15210 PRK15210
fimbrial protein;
28-179 1.92e-09

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 54.32  E-value: 1.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   28 GTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDC--DPVVAANAAV---------AFSGQ 96
Cdd:PRK15210  35 GKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafDPNIPDTAGSagkmskvtvSFSGT 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   97 ADAindnllAIASSTNTTTATGVGIEIL--DNTSAILK----PDGNSfstnQNLIPGTNVLHFSARYKGTGTSASAGQAN 170
Cdd:PRK15210 115 ANT------SKKAYTTSGSAQHVGVQLLksDNTSIIEPntpmPDGDA----QQLQAGNNELNFFARLIALDNGVTPGDFN 184


                 ....*....
gi 38703877  171 ADATFIMRY 179
Cdd:PRK15210 185 ASVTYTLKY 193
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 28-180 2.78e-08

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 51.01  E-value: 2.78e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   28 GTIHFEGELVNAACSVNTDSADqvVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDpvVAANAAVAFSGQADAINDNLLAI 107
Cdd:PRK15205  30 GDIHFTITIKAKACELEKDSLE--VDMGTMVLQKPVKVGTELNQKNFSIGLKDCD--GISKASVTMDGSPDPDDPSLFAL 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38703877  108 ASSTNTttatGVGIEILDNTSAILKPDGNSFSTNQNLI--PGTNVLHFSARYKGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15205 106 DAGGAT----GVALKIKTSKGTQQYPKSTDGTPVEWAIngDGTTQLNYIASYVPVNADATVGTANATVNFSVTYE 176
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 30-180 8.19e-07

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 46.99  E-value: 8.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   30 IHFEGELVNAACSVNTDSaDQVVTLGQYR--TDIFNAVGNTSAlIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAI 107
Cdd:PRK15260  31 VHYSGKLVAGACNLVVDN-DTMATVDFHTigSDNFDASGQTTP-VPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLAL 108

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 38703877  108 aSSTNTTTATGVGIEILDNTSAILKPdgnSFSTNQNLIPGTNVLHFSARY-KGTGTSASAGQANADATFIMRYE 180
Cdd:PRK15260 109 -EPSSEASGFAIGVETAAQQPVSINA---TVGTAFVLKEGITTINLQARLqKYAGEEVMPGEFSGSATVSFEYQ 178
PRK15296 PRK15296
fimbrial protein SthA;
29-180 1.47e-04

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 40.46  E-value: 1.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877   29 TIHFEGELVNAACSVNTD-SADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVA---ANAAVAFSGQADAINDNL 104
Cdd:PRK15296  25 TITFNGKIYDQACTVQVNgSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGTgvpTQAMFRFHGATDDSNPTY 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38703877  105 LAIASSTNTTTATGVGIEILD-NTSAILKPDGNSFSTnqnlIP---GTNVLHFSARYKGTGT-SASAGQANADATFIMRY 179
Cdd:PRK15296 105 FKNADEGSETGAAGVGISIQNaSHSDVTDNTDDAAVN----LPtdgSTADFTYYAAMANDGSaTVTGGDVSTQVTYTVSY 180


                 .
gi 38703877  180 E 180
Cdd:PRK15296 181 Q 181
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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