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Conserved domains on  [gi|15830442|ref|NP_309215|]
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hypothetical protein ECs_1188 [Escherichia coli O157:H7 str. Sakai]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2740 super family cl12457
Protein of unknown function (DUF2740); This family of proteins with unknown function has a ...
 1-48 1.59e-16

Protein of unknown function (DUF2740); This family of proteins with unknown function has a highly conserved sequence.


The actual alignment was detected with superfamily member pfam10872:

Pssm-ID: 287804  Cd Length: 48  Bit Score: 64.72  E-value: 1.59e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 15830442    1 MTKQLSPYQDKIHKHILRDRFLSSFKQPGRFRAELEKVKLMQKEKGHE 48
Cdd:pfam10872  1 MPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE 48
 
Name Accession Description Interval E-value
DUF2740 pfam10872
Protein of unknown function (DUF2740); This family of proteins with unknown function has a ...
 1-48 1.59e-16

Protein of unknown function (DUF2740); This family of proteins with unknown function has a highly conserved sequence.


Pssm-ID: 287804  Cd Length: 48  Bit Score: 64.72  E-value: 1.59e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 15830442    1 MTKQLSPYQDKIHKHILRDRFLSSFKQPGRFRAELEKVKLMQKEKGHE 48
Cdd:pfam10872  1 MPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE 48
 
Name Accession Description Interval E-value
DUF2740 pfam10872
Protein of unknown function (DUF2740); This family of proteins with unknown function has a ...
 1-48 1.59e-16

Protein of unknown function (DUF2740); This family of proteins with unknown function has a highly conserved sequence.


Pssm-ID: 287804  Cd Length: 48  Bit Score: 64.72  E-value: 1.59e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 15830442    1 MTKQLSPYQDKIHKHILRDRFLSSFKQPGRFRAELEKVKLMQKEKGHE 48
Cdd:pfam10872  1 MPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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