|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15377 |
PRK15377 |
type III secretion system effector HECT-type E3 ubiquitin transferase; |
7-782 |
0e+00 |
|
type III secretion system effector HECT-type E3 ubiquitin transferase;
Pssm-ID: 185275 [Multi-domain] Cd Length: 782 Bit Score: 1319.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 7 ISVNSGVISFESPVDSPSNEDVEVAlekwcaegefSENRHEVASKILDVISTNGetlSISEPITTLPD-----LLPGSLK 81
Cdd:PRK15377 1 MKISSGAINFSTIPNQVKKLITSIR----------EHTKNGLASKITSVKNTHG---SLNEKIKTGKDspiefALPQKIK 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 82 ELVlngctELKSINCLPPNLSSLSMVGCSSLEVINCSIPENVINLSLCH---------CSSLKHIEGSFPEALRNSVYLN 152
Cdd:PRK15377 68 DFF-----QPKDKNTLNKTLITVKNIKDTNNAGKKNISAEDVSKMNAAFmrkhianqtCDYNYRITGAAPLPGGVSVSAN 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 153 GCNSLNESQCQflayDVSQGRACLSKAELTADLIW---LSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLD 229
Cdd:PRK15377 143 NRPTVSEGRTP----PVSPSLSLQATSSPSSPADWakkLTDARLRQEAGEELTYADRDFSNADFRNINFSKINPSGFMLR 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 230 DTD-LRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIralfENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAI 308
Cdd:PRK15377 219 DGDiIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVC----SNTKFSNSDMNEASLKYSITTQQQPSFIETTLKNTI 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 309 IIPGMVLSGAILGDVKelfSEKSNTINLGGCYIDLSDI---------QENILSVLDNYTKSNKSILLTMNTSDDKYNHDK 379
Cdd:PRK15377 295 IIHKANLSGVILNEPD---NSSPPSVSLGGNFIRLGDIwlqmpllwtENAIDGFLNHEHNNGKSILMTINTLPDKYNQEK 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 380 VRAAEELIKKISLDEL--AAFRPyVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIM----MYMENGSL 453
Cdd:PRK15377 372 VRAMEELVKSIRLGRLteAAIRP-VESSLVSVLAHPPYTQSALIQEWLEPVQERFFAHQCQTYNDVPLpapdTYYQQRSL 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 454 LQAGMYFERHPGAMVSYNSSFIQIVMNGSR----RDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSgkPDWDDDSd 529
Cdd:PRK15377 451 PVLLDSFDRNSAAMTTHSGLFNQVILHCMTgvdcTDGMRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGS--PDWTTRA- 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 530 lAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSESFPIFSIPYHKAFSQNFVS 609
Cdd:PRK15377 528 -ADNFLLLSSQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHDFPVFLAAFNQQASQRRFG 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 610 GILDILIS---DNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEIL 686
Cdd:PRK15377 607 ELIDIILSteeHGELNQQFIAATNQKHSTVKLIDDASVSRLATIFNPLLPEGKLSPAHYQHILSAYHLTDATPQKQAETL 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 687 FCLGGVFCKYSSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAK 766
Cdd:PRK15377 687 FCLSTAFARYSSSAIFGTEHDSPPALRGYAEALMQKAWELSPAIFPSSEQFTDWSDRFHGLHGAFTCTSVVADSMQRHAR 766
|
810
....*....|....*.
gi 15830814 767 ESFPEIFSLYYPVAWR 782
Cdd:PRK15377 767 KYFPSVLSSILPLAWA 782
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
199-323 |
9.97e-19 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 84.61 E-value: 9.97e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 199 EELNYSGCDLSGLSLVGLNLSSVNFSGA----VLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNC-------- 266
Cdd:COG1357 3 SGADLSGADLSGADLSGADLSGANLSGAlsgaNLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGAnltgadls 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15830814 267 ------IIRALFENSNFSNSNLKNASFKGSSyiqyppiLNEADLTGAIiipgmvLSGAILGDV 323
Cdd:COG1357 83 ganlanLSGANLSGANLSGANLRGANLSGAN-------LSGADLSGAD------LSGANLSGA 132
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
136-309 |
1.34e-16 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 78.44 E-value: 1.34e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 136 HIEGSFPEALRNSVYLNGCNSlneSQCQFLAYDVSQ---GRACLSKAELT-ADLIwlSANRTGeesAEELNYSGCDLSGL 211
Cdd:COG1357 26 NLSGALSGANLSGANLSGANL---TGANLSGADLSGadlSGANLSGADLSgANLT--GADLSG---ANLANLSGANLSGA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 212 SLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCiiralfensNFSNSNLKNASFKGss 291
Cdd:COG1357 98 NLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGA---------DLSGANLSGANLSG-- 166
|
170
....*....|....*...
gi 15830814 292 yiqyppiLNEADLTGAII 309
Cdd:COG1357 167 -------ANLANLEGADL 177
|
|
| SopA_C |
pfam13979 |
SopA-like catalytic domain; This domain is found in the E. coli Type III secretion effector ... |
617-782 |
6.35e-15 |
|
SopA-like catalytic domain; This domain is found in the E. coli Type III secretion effector proteins SopA and NleL. These proteins have been shown to act as E3 ubiquitin ligase enzymes. This domain contains the active site cysteine residue.
Pssm-ID: 464061 Cd Length: 166 Bit Score: 73.31 E-value: 6.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 617 SDNELKERFIEALNSNKSDYKMIADDQQRKLACVWNPFLDGWELNAQHVDMIMGSHVLKDMPLRKQAEILFCLGGVFCKY 696
Cdd:pfam13979 1 EHGELNQQFLAATNQKHSTVKLIDDASVSRLATIFDPLLPEGKLSPAHYQHILSAYHLTDATPQKQAETLFCLSTAFARY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 697 SSSDMFGTEYDSPEILRRYANGLIEQAYKTDPQVFGSVYYYNDILDRLQGRNNVFTCTAVLTDMLTEHAKESFPEIFSLY 776
Cdd:pfam13979 81 SSSAIFGTEHDSPPALRGYAEALMQKAWELSPAIFPSSEQFTEWSDRFHGLHGAFTCTSVVADSMQRHARKYFPSVLSSI 160
|
....*.
gi 15830814 777 YPVAWR 782
Cdd:pfam13979 161 LPLAWA 166
|
|
| PRK09718 |
PRK09718 |
SopA family protein; |
159-596 |
7.00e-14 |
|
SopA family protein;
Pssm-ID: 182045 [Multi-domain] Cd Length: 512 Bit Score: 75.08 E-value: 7.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 159 ESQCQFLAYDVSQGRACLSKAELTAdliwlsanrtgeesaeeLNYSGCDLSGLSLVGLNLSSV----------NFSGAVL 228
Cdd:PRK09718 75 ECACDFLMDKDAQGYIDLSDLDLTS-----------------CHFKGDVISKVSFLSSNLQHVtfeckeigdcNFTTAIV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 229 DDTDLRMS---------------DLSQAVLENCSFKNSILNECNFCyanlsNCIIRalfeNSNFSNSNLKNASFKGSSYI 293
Cdd:PRK09718 138 DNVIFKCRrlhnvifikasgeyvDFSKNILDTVDFSQSQLTHSNFR-----ECQIR----NSNFDNCYLYASHFTRAEFL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 294 QYPPI-LNEADLTgAIIIPGMVLSgaiLGDVKELFSEKSNTInlggcyIDLSDIQENilSVLDNYTKSnksILLTMNTSD 372
Cdd:PRK09718 209 SAKEIsFIKSNLT-AVMFDHVRIS---TGNFKDCITEQLELT------IDYSDIFGN--EDLDGYINN---IIKMIDTLP 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 373 DKYNHDKVRAAEELIKKISLDELAAfRPYVKmSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMMYmENGS 452
Cdd:PRK09718 274 DNAMILKSVLAVKLVMQLKILNIVN-KNFIE-NMKKIFSHCPYIKDPIIRSYIHPDEDNKFDNFMRQNRFSKVNF-DTQQ 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 453 LLQAGMYFERHPGAMVSYNSSFIQIVMNGSRR--DGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDDSDl 530
Cdd:PRK09718 351 MIDFINRFNMNKWLIDKNNNFFIQLIDQALRStdDTIKANAWHLYKEWIRSDDVSPLFIEIEDNLRTFNTNELTRNDNI- 429
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15830814 531 aynWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSES-------FPIFS 596
Cdd:PRK09718 430 ---FILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTPETLFGSKshdkhalFPIFT 499
|
|
| SopA |
pfam13981 |
SopA-like central domain; This domain is found in the E. coli Type III secretion effector ... |
379-506 |
1.15e-10 |
|
SopA-like central domain; This domain is found in the E. coli Type III secretion effector proteins SopA and NleL. These proteins have been shown to act as E3 ubiquitin ligase enzymes.
Pssm-ID: 433623 Cd Length: 126 Bit Score: 59.56 E-value: 1.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 379 KVRAAEELIKKISLDELAaFRPyVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDtimswfnnsIMMYMENGSLLQAGM 458
Cdd:pfam13981 2 KVQLMEDLVKSLRLTEAC-IRP-VESSLVSVLSHPPYTQSPLISEWLGPVQERFFA---------APDTMRQQRILPVLL 70
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 15830814 459 -YFERHPGAMVSYNSSFIQIV---MNGSRRDGMQERFRELYEVYLKNEKVYP 506
Cdd:pfam13981 71 dTFDRNSAAMTTHSGLFIQVIlqaMTGVDTDGTRQKAAALYEQYLAHPAVSP 122
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
206-287 |
9.02e-10 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 55.74 E-value: 9.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 206 CDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIiralFENSNFSNSNLKNA 285
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCN----LKNSNFSDVKLKGA 76
|
..
gi 15830814 286 SF 287
Cdd:pfam13599 77 DF 78
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
237-352 |
1.83e-08 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 54.56 E-value: 1.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 237 DLSQAVLENCSFKNSILNECNFCYANLSNCIIRALFENSNFSNSNLKNASFKGSSyiqyppiLNEADLTGAIIIpGMVLS 316
Cdd:COG1357 1 DLSGADLSGADLSGADLSGADLSGANLSGALSGANLSGANLSGANLTGANLSGAD-------LSGADLSGANLS-GADLS 72
|
90 100 110
....*....|....*....|....*....|....*.
gi 15830814 317 GAILGDVKelFSEkSNTINLGGCYIDLSDIQENILS 352
Cdd:COG1357 73 GANLTGAD--LSG-ANLANLSGANLSGANLSGANLR 105
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
170-371 |
2.00e-06 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 50.78 E-value: 2.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 170 SQGRACLSKAELTAdliwlsANRTGEesaeelNYSGCDLSGLSLVGLNL-----SSVNFSGAVLDDTDLRMSDLSQAVLE 244
Cdd:PRK15196 148 AQGGMNLKGAVLTG------ANLTAE------NLCDADLSGANLEGAVLfmadcEGANFKGANLSGTSLGDSNFKNACLE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 245 NCSFKNSILNECNFCYANLSNC-IIRALFENSNFSNSNLKNASFKGSsyiqyppILNEADLTGAII----IPGMVLSGAI 319
Cdd:PRK15196 216 DSIMCGATLDHANLTGANLQHAsLLGCSMIECNCSGANMDHTNLSGA-------TLIRADMSGATLqgatIMAAIMEGAV 288
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 15830814 320 LGDVKelfSEKSNTI--NLGGCyiDLSDIQENILSVLDNYTKSNKSILLTMNTS 371
Cdd:PRK15196 289 LTRAN---LRKASFIstNLDGA--DLAEANLNNTCFKDCTLTHLRTEDATMSTS 337
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
217-254 |
3.06e-05 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 41.56 E-value: 3.06e-05
10 20 30
....*....|....*....|....*....|....*...
gi 15830814 217 NLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILN 254
Cdd:pfam00805 2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
236-284 |
5.20e-05 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 40.79 E-value: 5.20e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 15830814 236 SDLSQAVLENCSFKNSILNECNFCYANLSNCiiralfensNFSNSNLKN 284
Cdd:pfam00805 1 ANLSGANLSGANLSGANLSGANLTGANLSGA---------DLSGANLSG 40
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
222-258 |
6.39e-05 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 40.79 E-value: 6.39e-05
10 20 30
....*....|....*....|....*....|....*..
gi 15830814 222 NFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNF 258
Cdd:pfam00805 2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
206-245 |
9.47e-05 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 40.02 E-value: 9.47e-05
10 20 30 40
....*....|....*....|....*....|....*....|
gi 15830814 206 CDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLEN 245
Cdd:pfam00805 1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
251-289 |
1.88e-04 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 39.25 E-value: 1.88e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 15830814 251 SILNECNFCYANLSNCI-IRALFENSNFSNSNLKNASFKG 289
Cdd:pfam00805 1 ANLSGANLSGANLSGANlSGANLTGANLSGADLSGANLSG 40
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
200-263 |
3.94e-04 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 39.56 E-value: 3.94e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15830814 200 ELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANL 263
Cdd:pfam13599 15 GTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
22-128 |
4.36e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 44.00 E-value: 4.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 22 SPSNEDVEVALEKWCAEGEFSENRHEVASKILDVISTNGETLSISEP-ITTLPDLLPGSLKELVLNGcTELKSINCLPPN 100
Cdd:PRK15387 165 TPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESgLTTLPDCLPAHITTLVIPD-NNLTSLPALPPE 243
|
90 100 110
....*....|....*....|....*....|
gi 15830814 101 LSSLSMVG--CSSLEVincsIPENVINLSL 128
Cdd:PRK15387 244 LRTLEVSGnqLTSLPV----LPPGLLELSI 269
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
202-240 |
4.39e-04 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 38.48 E-value: 4.39e-04
10 20 30
....*....|....*....|....*....|....*....
gi 15830814 202 NYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQ 240
Cdd:pfam00805 2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
256-306 |
5.78e-04 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 38.09 E-value: 5.78e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 15830814 256 CNFCYANLSNCIiralFENSNFSNSNLKNASFKGSSyiqyppiLNEADLTG 306
Cdd:pfam00805 1 ANLSGANLSGAN----LSGANLSGANLTGANLSGAD-------LSGANLSG 40
|
|
| PRK15386 |
PRK15386 |
type III secretion effector GogB; |
14-146 |
1.67e-03 |
|
type III secretion effector GogB;
Pssm-ID: 237954 [Multi-domain] Cd Length: 426 Bit Score: 41.78 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 14 ISFESPVDSPSNEDVEvALEKWCAEGEFSENRHEVASKILDVISTNGETLSISePITTLPDLlpgslkelvlngctELKS 93
Cdd:PRK15386 3 IEFLSTENEKNKEAML-STSQLEPDGTFCSNSTETSAEIRSEITPQIEEARAS-GRLYIKDC--------------DIES 66
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 15830814 94 INCLPPNLSSLSMVGCSSLEVINCSIPENVINLSLCHCsslKHIEGsFPEALR 146
Cdd:PRK15386 67 LPVLPNELTEITIENCNNLTTLPGSIPEGLEKLTVCHC---PEISG-LPESVR 115
|
|
| Pentapeptide |
pfam00805 |
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ... |
212-250 |
1.79e-03 |
|
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Pssm-ID: 459943 [Multi-domain] Cd Length: 40 Bit Score: 36.55 E-value: 1.79e-03
10 20 30
....*....|....*....|....*....|....*....
gi 15830814 212 SLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKN 250
Cdd:pfam00805 2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
|
|
| PRK15197 |
PRK15197 |
type III secretion system effector PipB; |
211-355 |
2.83e-03 |
|
type III secretion system effector PipB;
Pssm-ID: 185119 [Multi-domain] Cd Length: 291 Bit Score: 40.68 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 211 LSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSilnecNFCYANLSNCIIRAlfenSNFSNSNLKNASFKGS 290
Cdd:PRK15197 154 LNLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGA-----NLCCANLHAVNLMG----SNMTKANLTHADLTCA 224
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15830814 291 SyiqyppiLNEADLTGAIIIPGMV----LSGAILGDVKelfseKSNTINLGGcyIDLSDIQENILSVLD 355
Cdd:PRK15197 225 N-------MSGVNLTAAILFGSDLtdtkLNGAKLDKIA-----LTLAKALTG--ADLTGSQHTPTPLPD 279
|
|
| PRK15197 |
PRK15197 |
type III secretion system effector PipB; |
202-318 |
2.93e-03 |
|
type III secretion system effector PipB;
Pssm-ID: 185119 [Multi-domain] Cd Length: 291 Bit Score: 40.30 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15830814 202 NYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLE--NCSFKN---SILNECNFCYANLSNC-IIRALFENS 275
Cdd:PRK15197 160 NLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHavNLMGSNmtkANLTHADLTCANMSGVnLTAAILFGS 239
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 15830814 276 NFSNSNLKNAsfkgssyiqyppILNEADLTGAIIIPGMVLSGA 318
Cdd:PRK15197 240 DLTDTKLNGA------------KLDKIALTLAKALTGADLTGS 270
|
|
| |
